prot_E-siliculosus-1a_F_contig1056.404.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1056.404.1
Unique Nameprot_E-siliculosus-1a_F_contig1056.404.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length150
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1056.404.1 vs. uniprot
Match: D8LU11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU11_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 5.970e-6
Identity = 21/25 (84.00%), Postives = 22/25 (88.00%), Query Frame = 0 
Query:   37 GGTSTWGKGERVAGMKEWRAPPTCY 61
            GG+STWGK ERV GMKEWR PPTCY
Sbjct:   37 GGSSTWGKDERVVGMKEWRVPPTCY 61
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1056.404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LU11_ECTSI5.970e-684.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1056contigE-siliculosus-1a_F_contig1056:22394..23462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1056.404.1mRNA_E-siliculosus-1a_F_contig1056.404.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1056 22394..23462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1056.404.1 ID=prot_E-siliculosus-1a_F_contig1056.404.1|Name=mRNA_E-siliculosus-1a_F_contig1056.404.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=150bp
MQVEAEEEGKEDGAGSGAGSGGGAVAGVSDGKGVGKGGTSTWGKGERVAG
MKEWRAPPTCYNLPRPSRVRAILGAALGRGGGEALLDPARHARVRPRQDR
LGRGHPKEGHDRRAPPRQAGQFRREFFRLPDSISRGLHAEPRASALPTLC
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