prot_E-siliculosus-1a_F_contig10547.396.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10547.396.1
Unique Nameprot_E-siliculosus-1a_F_contig10547.396.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length128
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10547.396.1 vs. uniprot
Match: D8LE68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE68_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 2.470e-84
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 0 
Query:    1 MVVGEGGKALLAQFYQKHGCIAISDVTRGLHRGFVRLRIAQPRGSNRAAGGGVQCMAGSLTANSGLVFLGRAGLSALQAVRVDPWDGLGSLSQPLPDSGPVLAVACHPSRTIVAACLSDGTICLWDYD 128
            MVVGEGGKALLAQFYQKHGCIAISDVTRGLHRGFVRLRI+QPRGSNRAAGGGVQCMAGSLTANSGLVFLGRAGLSALQAVRVDPWDGLGSLSQPLPDSGPVLAVACHPSRTIVAACLSDGTICLWDYD
Sbjct:   90 MVVGEGGKALLAQFYQKHGCIAISDVTRGLHRGFVRLRISQPRGSNRAAGGGVQCMAGSLTANSGLVFLGRAGLSALQAVRVDPWDGLGSLSQPLPDSGPVLAVACHPSRTIVAACLSDGTICLWDYD 217
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10547.396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LE68_ECTSI2.470e-8499.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 88..126
e-value: 3.8E-4
score: 29.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 101..128
score: 8.637
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 17..128
e-value: 7.5E-7
score: 30.2
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 94..128
score: 8.65
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 86..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10547contigE-siliculosus-1a_F_contig10547:1039..2326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10547.396.1mRNA_E-siliculosus-1a_F_contig10547.396.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10547 1018..2326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10547.396.1 ID=prot_E-siliculosus-1a_F_contig10547.396.1|Name=mRNA_E-siliculosus-1a_F_contig10547.396.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=128bp
MVVGEGGKALLAQFYQKHGCIAISDVTRGLHRGFVRLRIAQPRGSNRAAG
GGVQCMAGSLTANSGLVFLGRAGLSALQAVRVDPWDGLGSLSQPLPDSGP
VLAVACHPSRTIVAACLSDGTICLWDYD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat