mRNA_E-siliculosus-1a_F_contig1053.386.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1053.386.1 vs. uniprot
Match: A0A6H5JU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU65_9PHAE) HSP 1 Score: 1332 bits (3447), Expect = 0.000e+0 Identity = 700/803 (87.17%), Postives = 712/803 (88.67%), Query Frame = 1 Query: 1 MKALACSFSGWEGPYVVLTGGELEMDLCDFRGSQAEVLVAATNASSPARIRNTAVGIESYASLVSSDADSSTLSRNVMTCSADPCGVSSGSSSSINGVGSSGVVSGSAAAAVTTSGGSHRVLSQHRRVSSLGGVHDAKGKGLGGDSSSRGRPRRVLSTASEEEGSFSNQDCVDGNLGVYCPCFVATVTGEEECLGETTTLELEAPSYELLAVGIQGTISSTLNITAGIEGGPVVWKVEEVAEVHPTEALTWSIVPNVGILEEGGSATVAITGSLTSDFNGPTHTLFKAESRQSGNTALAMVNTTFYYCLQGEYFNDEECLLCSDLELDGEGLDCDEPGVLQSTLPVASGYWRSSDDTTTIRECLYEEACKGGTVISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAVMYLLAVLGGLLALACAWLLFRYLIQEPVSPGRFLSCRNSRMVSKVKELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSPSFYGRLVLTTVVPIAFGLALCCTFMYAKSRTVRAGLPKANEGSSMRSINTVVSXXXXXXXXXXXXXXAPATAVTGTRNGHGMIMSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQTFACDTLDELGTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPKQALRDGVSPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYIMGAILIFLSM 2409
MKALACSFSGWEGPYVVLTGGELEMDLCDFRGS I GVGSSG VSGSAAA VTTSGGSHRVLSQHRRVSS GGVHDAKG L D S GRPRRVLSTASEEEGSFSNQDCVDGNLGVYCPCFVAT+TGEEECLGETTTLELEAPSYELLAVGIQGTISSTLNITAG EGGPVVWKVEEVAEVH TEALTWSIVPNVGILEEGGSAT ITGSLTSDFNGPTH LFKAESRQSGNTALAMVNTTFYYCL+GEYFNDEECLLCSDLELDGEGLDCDEPGVLQSTLPVASGYWRSS DTTTIR+CLYEEACKGGTVISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRA MYLLAVLGGLLA+ACAWLL RYLIQEPVSPGRFLSC NSRMVSKVKELP+HKLKIPIVVFQILTQYADITTVDFPPA+TKLLGFMDVLNLDMGWVLSASCIFSP+FYGRLVLTT+VPI FGLALCCTFMYAKSR+VR GLPKANEGSS+RSINTVVSXXXXXXXXXXXX APAT TGTRNGHGMIMSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQ FACDTLDE G TFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLF+HRHRIYPKQALRDGVSPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDD LYI+GAILIFLSM
Sbjct: 1107 MKALACSFSGWEGPYVVLTGGELEMDLCDFRGS-------------------------------------------------------------IGGVGSSGAVSGSAAAIVTTSGGSHRVLSQHRRVSSSGGVHDAKGLLLR-DDSGPGRPRRVLSTASEEEGSFSNQDCVDGNLGVYCPCFVATITGEEECLGETTTLELEAPSYELLAVGIQGTISSTLNITAGREGGPVVWKVEEVAEVHSTEALTWSIVPNVGILEEGGSATAVITGSLTSDFNGPTHALFKAESRQSGNTALAMVNTTFYYCLEGEYFNDEECLLCSDLELDGEGLDCDEPGVLQSTLPVASGYWRSSADTTTIRQCLYEEACKGGTVISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAGMYLLAVLGGLLAMACAWLLLRYLIQEPVSPGRFLSCGNSRMVSKVKELPVHKLKIPIVVFQILTQYADITTVDFPPAYTKLLGFMDVLNLDMGWVLSASCIFSPNFYGRLVLTTLVPIVFGLALCCTFMYAKSRSVRVGLPKANEGSSIRSINTVVSXXXXXXXXXXXX--APATVFTGTRNGHGMIMSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQAFACDTLDEQGKTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFQHRHRIYPKQALRDGVSPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDHLYILGAILIFLSM 1845
BLAST of mRNA_E-siliculosus-1a_F_contig1053.386.1 vs. uniprot
Match: D8LRF9_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF9_ECTSI) HSP 1 Score: 1151 bits (2978), Expect = 0.000e+0 Identity = 620/803 (77.21%), Postives = 637/803 (79.33%), Query Frame = 1 Query: 1 MKALACSFSGWEGPYVVLTGGELEMDLCDFRGSQAEVLVAATNASSPARIRNTAVGIESYASLVSSDADSSTLSRNVMTCSADPCGVSSGSSSSINGVGSSGVVSGSAAAAVTTSGGSHRVLSQHRRVSSLGGVHDAKGKGLGGDSSSRGRPRRVLSTASEEEGSFSNQDCVDGNLGVYCPCFVATVTGEEECLGETTTLELEAPSYELLAVGIQGTISSTLNITAGIEGGPVVWKVEEVAEVHPTEALTWSIVPNVGILEEGGSATVAITGSLTSDFNGPTHTLFKAESRQSGNTALAMVNTTFYYCLQGEYFNDEECLLCSDLELDGEGLDCDEPGVLQSTLPVASGYWRSSDDTTTIRECLYEEACKGGTVISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAVMYLLAVLGGLLALACAWLLFRYLIQEPVSPGRFLSCRNSRMVSKVKELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSPSFYGRLVLTTVVPIAFGLALCCTFMYAKSRTVRAGLPKANEGSSMRSINTVVSXXXXXXXXXXXXXXAPATAVTGTRNGHGMIMSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQTFACDTLDELGTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPKQALRDGVSPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYIMGAILIFLSM 2409
M+ALACSFSGWEGPYVVLTGGELEMDLCDFRG R V+ ECLGETTTLELEAPSYELLAVGIQGTISSTLNITAGIEGGPVVWKVEEVA+VHPTEALTWSIVPNVGILEEGGSATVAITGSLTSDFNGPT LFKAESRQSGNTALAMVNTTFYYC QGEYF+D+ECLLCSDLELDGEGLDCDEPGVLQ TLPVASGYWRSSDDTTTIR+CLYEEAC+GG+ ISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRA MY+LAVLGGLLALACAWLLFRYLIQEPVSPGRFLSCRNSRMVSKVKELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSP+FYGRLVLTT+VPIA GLALCCTFMYAKSRTVRAGLPKANEGSSMRS+NTVVSXXXXXXXXXXXXXX PAT V G+R+GHG++MSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQTFACDTLDELGTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPKQALRDGVSPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYI+GAILIFLSM
Sbjct: 901 MRALACSFSGWEGPYVVLTGGELEMDLCDFRGR---------------------------------------FGRGVL-----------------------------------------------------------------------------------------------------------------ECLGETTTLELEAPSYELLAVGIQGTISSTLNITAGIEGGPVVWKVEEVADVHPTEALTWSIVPNVGILEEGGSATVAITGSLTSDFNGPTQALFKAESRQSGNTALAMVNTTFYYCQQGEYFSDDECLLCSDLELDGEGLDCDEPGVLQLTLPVASGYWRSSDDTTTIRKCLYEEACEGGSAISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAWMYVLAVLGGLLALACAWLLFRYLIQEPVSPGRFLSCRNSRMVSKVKELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSPNFYGRLVLTTLVPIALGLALCCTFMYAKSRTVRAGLPKANEGSSMRSVNTVVSXXXXXXXXXXXXXX-PATVVAGSRSGHGIMMSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQTFACDTLDELGTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPKQALRDGVSPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYILGAILIFLSM 1550
BLAST of mRNA_E-siliculosus-1a_F_contig1053.386.1 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE) HSP 1 Score: 324 bits (830), Expect = 1.780e-92 Identity = 247/789 (31.31%), Postives = 351/789 (44.49%), Query Frame = 1 Query: 508 DCVDGNLGVYCPCFVATVTGEEECLGETTTLELEAPSYELLAVGIQGTISSTLNITAGIEG-GPVVWKVEEVAEVHPTEALTWSIVPNVGILEEGGSATVAITGS-LTSDFNGPTHTLFKAES---------RQSGNTALAM-VNTTFYYCLQGEYF-----NDEECLLCSD-LELDG-EGLDCDEPGVLQSTLPVASGYWRSSDDTTTIRECLYEEACKGGTVISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEA------FRAVMYLLAVLGGLLALACAWLL--------FRYLIQEPVS--------------------------PG-------RFLSCRNSRMVSKVKE---------------------------------------------LPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSP-SFYGRLVLTTVVPIAFGLALCCTFMYAKSRTVRAGLPKANEGSSMRSINTVVSXXXXXXXXXXXXXXAPATAVTGTRNGHGMIMSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQTFACDTLDELGTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPK---QALRDGV----------------------------------SPE-------RRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYIMGAILIFLS 2406
+CVD LGV C C E+ CL + L + + L + L ++A +G P +W + H E L ++P+ GIL G + TVA+TGS L D G + F S S +T L + V + FY C EY +D+ + C + +DG EG+DC+ PG ++LPV GYWRS ++ T+ C++ E+C G T +S SDDYC+ GY+GPYCA C +GY GI N CH C F ++ L L +L LA +L+ R + +S PG F R R S+ K+ LP+ KLKI +VV+QILT + IT +FPPA+ + L +D +NLD+G + S +CI SFY RL++TTV PI L T+ AKSR G G AR+ + + G+L+T FLV+++ ST+VF+TFACD G ++LRADYSL C T H Y+ YAG+MI+VYPIGIPLLYA++L+ +R + P+ +A D V +PE +R + + ++ LW+ + P YYYEVIEC RR+LLTG L+FI P++A QA +AC+ + A++ F LRP D D LY +G + IFLS
Sbjct: 224 ECVDSVLGVLCEC-----PSEDYCLNDGGALSISLLVHPLNVTYSPDPVYFELLVSASADGVTPAIWNLS-----HEAEDLGLQVLPSSGILSPGENVTVAVTGSPLRQDVGGDLVSRFAVSSVGSSGGGTAESSSSTGLELEVESAFYLCQAFEYAVPVDGDDDTAVSCEQCVVIDGAEGVDCELPGATLASLPVREGYWRSGKESATVLACIHAESCAGATHVSTSDDYCSSGYEGPYCASCQAGYGTGIGNTCHSCDGTRFRWLIFAGSLFTLVTLL-VLGLAVVFLIGGLDAVEGVRRTVSRSLSVTTRLPLGRRSASVGSGAAAAAEGAVPGFAHSFTPAFEEGRGERHSSQGKQXXXXXXXXXTAMDSFNRPGEGWRKEDEKSAACCGIGEKIKRWTARLPMDKLKILVVVWQILTVFPSITGAEFPPAYAQFLSIIDFINLDIGSIFSGTCILPRVSFYQRLLVTTVTPIGLAGVLLLTYTMAKSRA-----------------------------------------------GIGSASVVARKAAWSRHMAAGLLLT--FLVFTSTSTVVFKTFACDDEAVEGESYLRADYSLSCNTATHTWYKVYAGVMIVVYPIGIPLLYAFILWINRESLNPRPRPKATDDDVDETTVPAQDADASGWSVASRKAGGXXXGEYVSKETPEELEERLQKRRQNPDLVPSMFLWKDFDPDMYYYEVIECGRRILLTGALIFIAPHTAAQAAMACMFAFASLLGFELLRPHLDPADSWLYRLGCVTIFLS 952
BLAST of mRNA_E-siliculosus-1a_F_contig1053.386.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI) HSP 1 Score: 326 bits (835), Expect = 9.830e-92 Identity = 247/772 (31.99%), Postives = 353/772 (45.73%), Query Frame = 1 Query: 508 DCVDGNLGVYCPCFVATVTGEEECLGE--TTTLELEAP----SYELLAVGIQGTISSTLNITAGIEGGPVVWKVEEVAEVHPTEALTWSIVPNVGILEEGGSATVAITGSLTS-DFNGPTHTLFKAESRQSGN----TALAM-VNTTFYYCLQGEY----------FNDEECLLCSDLELDG-EGLDCDEPGVLQSTLPVASGYWRSSDDTTTIRECLYEEACKGGTVISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECT-----------EAFRAVMYLLAVL------GGLLALACAWLLFRYLIQEPVSPGRFLSC-----------RNSRMVSKVKE-----------------------------------------------------------------LPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSP-SFYGRLVLTTVVPIAFGLALCCTFMYAKSRTVRAGLPKANEGSSMRSINTVVSXXXXXXXXXXXXXXAPATAVTGTRNGHGMIMSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQTFACDTLDELGTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPKQALRDGVSP----------------------ERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYIMGAILIFLS 2406
+CVD LGV C C ++ECLG ++ L+ P +Y V + +S+T N + P +W + + L+ ++P+ GIL G ATV +TGS + G + F S SG T + + V + FY C EY F+ E+C+ +DG EGLDC+ PG ++LP+ GYWRSS ++ +I +C++ AC G T IS + DYC GYQGPYC VC G+ G N CH C F V+ LL +L GGL A+ L R L V GR S RN+ S+V+E LP+ KLKI +VV+QIL+ + IT VDFPPA+ + L ++D+L+ D+G VLSASC+F FY L+LTT+ P+ + L T+ AK R A GS+ G +M A RH+ + SFLV+ ST+ F+TFACD G ++LRADYS++C+T +H+ Y+ YAG+MI+VYP+GIPLLYA++L+++R + P+ V+P E+R + + ++ LW+ + P YYYEV+EC RR+LLTG LVFI PN+A Q AC+ + ++ F LRP D D LY +G + IFLS
Sbjct: 719 ECVDSALGVLCECLE-----DDECLGGGGALSIALKTPPPDVTYSPDLVYFELLVSATANGST-----PAIWNL-----TFDADELSLQVLPSSGILPPGEDATVLVTGSPQGQEVGGDLVSQFVVTSVGSGTPDSTTGVDVEVYSAFYLCQAFEYAMPVDDENAAFSCEQCV-----NIDGAEGLDCELPGATLASLPIREGYWRSSRESLSIHQCVHHTACVGATQISSAQDYCGEGYQGPYCTVCTEGFGRGAGNTCHSCEGTKSRLLIAAGSLFALVILLLVILAVVYLVGGLDAVEG---LRRSLSTRSVLSGRDSSSHKVGSSGKSIGRNALTGSEVEERRGEGAASRKGVTSVPISEVDVSEMKSDASSDTDGEDDHAPPMARGGDQPGCCGQGEKIKRWAARLPMDKLKILVVVWQILSVFPSITAVDFPPAYARFLSWIDMLSFDLGHVLSASCVFPVMDFYQSLLLTTLGPLGVAMVLVLTYWIAKRR--------AGAGSA------------------------------------GSLMRRAAWS-----RHMAAGLLLSFLVFIATSTMAFKTFACDDEAVEGKSYLRADYSIQCHTDKHEWYKVYAGVMIMVYPVGIPLLYAFILWQNRESLNPRVKTGAVVNPRADGSTDRITYKANSEDLEEKLEKRRRNPDLIPSMFLWKDFGPEIYYYEVVECGRRILLTGVLVFISPNTAAQVAAACMFAFVSLLGFELLRPHLDPVDSWLYRLGCLCIFLS 1418
BLAST of mRNA_E-siliculosus-1a_F_contig1053.386.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI) HSP 1 Score: 318 bits (815), Expect = 1.940e-89 Identity = 253/960 (26.35%), Postives = 378/960 (39.38%), Query Frame = 1 Query: 469 STASEEEGSFSNQDCVDGNLGVYCPCF-----VATVTGEEECL----GETTTLELEAPSYELLAVGIQGTISSTLN----IT---------------AGIEGGPVVWKVEEVAEVHPTEALTWSIVPNVGILEEGGSATVAITGSLTSDFNGPTHTLFKAESRQS------------------------GNTALAMVNTTFYYCLQGEYFNDEE---------CLLCSDLELDGEGLDCDEPGVLQSTLPVASGYWRSSDDTTTIRECLYEEACKGGTVISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAVMYLLAVLGGLLALACAWLLFRYLI------------------------------------------------QEPVS-------------------PGRFLSCRNSRMVSKV------------------------------------------------------------------------------------------------------------------------------------------KELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSP-SFYGRLVLTTVVPIAFGLALCCTFMYAKSRTVRAG--LPKANEGSSMRSINTVVSXXXXXXXXXXXXXXAPATAVTGTRNG-----------------------------HGMIMSEARQM--------SVVKR--------RHVGVLVTASFLVYSTVSTIVFQTFACDTLDELGTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYP-------KQALRDGVSPER---RLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLY 2376
ST+ EGS C+DG+LGVYC C+ +A + E C+ G L P+ + + G + +TLN +T AG EGG V+W V + ++ W++ P+ G+L G S T+ + + DFNG F+A+ +TA A + +F++CL+G Y+N+E C LC+DL+ D +G+DC++ G TLPV SGYWR+S D+ IR+C E+AC+GG++++ +YC GY+GP CAVC SGY G++N CH CT +F+ MY + + LL L LL YL+ Q P GRF+ RM + + LPL KLKI +VV+QI +A++T V FPP + K L + + + D+GW++SA+C+ + FY +L++ T+ P+ L L TF Y +R VR G + + ++ S+++ + P + + G G AR++ S +++ RH +++ +LVY+ VST+VFQ FAC+ E+G +FLRAD+ +EC TP+H Y+ YA MI +YP+GIP + + L R RI P Q R V E+ R D+ IA T LW AY P+RYYYEV EC RRLLLTG LVF+ P++ GQ CV + ++ +F LRP D D +LY
Sbjct: 387 STSPCSEGS----PCIDGDLGVYCQCYTRESSIAEGSPSETCVTGDPGLLNLTVLSEPADAVYPTMLDGELLATLNDDETVTTSSSTGGSGVAVSGGAGTEGG-VIWNVSALPFSLGEGSMEWTVFPSTGLLLPGRSITLHVVTLPSEDFNGEATVSFQADGMSPPASPAAEXXXXXXXXXXXXXXXXXXDTAAASFDVSFFHCLEGTYWNNECDTGGDSDSCCELCTDLDGDEDGVDCEDMGATTRTLPVQSGYWRASLDSVYIRQCFNEDACRGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVASLLTLFVVALLAVYLVGGRGAVSNTMTNTRESVRMLQKRGSGLLRSEGTTRRFDFSASGGWSSWQHPTKGGDPLKSVGEESDGGESGGSGRFMGAWGRRMSASIGVPMRGAAITCAAAATGPSSSVNDSKGAGNKLDSAGTMGADFLPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRGLQPSAAPAVRGPRGDGKGARGGQQQGMGGGDRKKKTAAARIGEMLARLPLSKLKIVVVVWQISNAFAEVTKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTF-YLGARPVRTGRVIDMSFRNNTSTSVSSATAATLAAYDSGISGSVRPRAGASDSARGTASTTAXXXXXXXXXXXXXXXXXXXXXXXQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKTYAAAMICIYPLGIPAAFCYFLTRQMSRINPPTDKGLKNQRGRKHVVTEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECLRRLLLTGLLVFLAPDTPGQVAFGCVFAFLSLLVFELLRPHTDHLDMQLY 1340
BLAST of mRNA_E-siliculosus-1a_F_contig1053.386.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE) HSP 1 Score: 319 bits (817), Expect = 4.000e-89 Identity = 265/949 (27.92%), Postives = 398/949 (41.94%), Query Frame = 1 Query: 19 SFSGWEGPYVVLTGGELEMDLCDFRGSQAEVLVAATNASSPARIRNTAVGIESYASLVSSDADSSTLSRNVMTCSADPCGVSSGSSSSINGVGSSGVVSGSAAAAVTTSGGSHRVLSQHRRVSSLGGVHDAKGKGLGGDSSSRGRPRRVLSTASEEEGSFSNQDCVDGNLGVYCPCFVATVTGEEECLGE-----TTTLELEAPSYE-----LLAVGIQGTISSTLNITAGIE-----------GGPVVWKVEEVAEVHPTEALTWSIVPNVGILEEGGSATVAITGSLTSDFNGPTHTLFKAESRQSGNTALAM---------------VNTTFYYCLQGEYFNDE----------ECLLCSDLELDG--EGLDCDEPGVLQSTLPVASGYWRSSDDTTTIRECLYEEACKGGTVISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAVMYLLA-----------------VLGGLLALAC---------------------------------------------------AWLLFRYLIQEPVSPG-------------RFLSCRNSRMVSKVKELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSP-SFYGRLVLTTVVPIAFGLALCCTFMYAKSRTVRAGL-PKANEGSSMRSINTVVSXXXXXXXXXXXXXXAPATAVTGTRNGHGMIMSEARQMSVVKR------------RHVGVLVTASFLVYSTVSTIVFQTFACDTLDELGTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPK--QALRDGVSP----ERRLV----DKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYIMGAILIFLS 2406
SF G+ G VV GEL +D CDF GS + VLV A + IRN +G+++Y ++ +D L SAD R +L D+ G EGS+ C++G+LGVYC + T EE C T TL + S L+ +Q +++++ AG + V W V + E W++ P+ G+L G S + + FNG + +A + +T ++ V+ Y C +G ++N C LC++ +DG EG+DC G LP+ +GYWR+ + TIRECL EEACKGGT +++ +YC GY GP CAVC +G+ G++ CH CT F+ MY L ++GG A++ AW VS G R +R+ + + LPL KLKI IVV+QI + +ADIT FPP + K L + + + D+GW+LSA+C+ + FY +L++ T+ P+ L TF + P A S + TA +G + S R S ++ RH +++ +LVY+ +ST+VFQTFAC+ L E+G +LRAD+ +EC T H LY+ YAG+M+ +YP+GIP ++ + L R R RI P +AL+ ER++ D+ IA T LW AY P YYYEV EC RRLLLTG LVF++P++ GQ +C+ ++ ++ +F LRP + D +LY G ++I +
Sbjct: 746 SFVGFAGEVVVYGEGELYLDECDFSGSSSAVLVYAELEDATV-IRNAVLGVKTYENIADDASDMLQLP------SAD-------------------------------------------RFINLNLTCDSSAVSPCG------------------EGSW----CLEGDLGVYCERYQLRSTLEEVCASGDVDALTLTLIEDTESQRTFYPSLIERELQLSLAASNATDAGDDDIATSSRSCAGANRVAWSVSGLWPPSEEEQDDWTVFPSTGLLLPGESVRLQLVSQPNDAFNGFANITVRANDITALSTTASILASDAEPQSEGGDVTVSVEHYLCDEGSFWNSSVSGADLDPTVACKLCTE-SIDGAVEGVDCTSAGATTKELPIKAGYWRAKVTSLTIRECLNEEACKGGTTVAEVQEYCNEGYVGPQCAVCGTGFGKGVAYECHPCTAGFQGGMYFLLAXXXXXXXXXXXXXXXYLVGGKSAVSSTVVSTKESALRIQHRGSVLLTRKVSSFGRARSDFGDLTEGPSVESSAVSTKAWGTEGKAAPTDVSVGGSRGQGTGGTGNDRDDDAPPTRVANLLAALPLSKLKIVIVVWQITSAFADITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLCFLGITFFVGSRPAKETNMSPNATTADGGASGSGGRELEEGRVQGACSGSTTSVTANSGAAAREPSVRSALRAKSGDRKNPEQERLWGLFARHTTMMLIVLYLVYTQISTVVFQTFACEHLPEIGKRYLRADFGIECDTQRHTLYKAYAGVMMCIYPLGIPAVFLYFLLRQRSRINPPTDEALKKRRGGRHVVERKMTVRDKDQSIAPTSFLWNAYFPKCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNHIDRQLYRTGCLVILFT 1621
BLAST of mRNA_E-siliculosus-1a_F_contig1053.386.1 vs. uniprot
Match: A0A6H5JU27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU27_9PHAE) HSP 1 Score: 291 bits (744), Expect = 2.000e-83 Identity = 156/370 (42.16%), Postives = 227/370 (61.35%), Query Frame = 1 Query: 1363 SRMVSKVKELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSPSFYGRLVLTTVVPIAFGLALCCTFMYAKSRTVRAGLPKANEGSSMRSINTVVSXXXXXXXXXXXXXXAPATAVTG-TRNGHGMIMSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQTFACDTLDELGTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPKQALRDGV--------------------SPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYIMGAILIFLSM 2409
S M K++ +P HKLKIP VV QI+TQYA IT+++F P F L + V+NLD+GWVL++ CI +FYG L+ TV P+ L L T++Y + P+ + ++ +++ + +P T+ T + +M V+ ++ V +T +F +YSTVST++FQTF+CD L++L ++LRADY+++C + HK ++ YAG MILVYPIGIP+ +A +L+R R I P + + P++RL D++IA T LW+AYRP+ YYYEV+EC RRLLLTGCLVFILPNSAGQA VACVL+V TVA+F + P++D +D R Y +GA+ IFL+M
Sbjct: 38 SVMSRKIRTMPFHKLKIPFVVLQIMTQYASITSIEFAPMFQTFLSTISVINLDLGWVLTSLCIIDVNFYGNLLAATVGPLMALLVLAVTYLYTCKKHRLEPRPREADDQAIYPMSSFRT--------------SPNTSSENDTAEPYQGVMRR------VQDKYTTVALTMAFFLYSTVSTVIFQTFSCDELEDLDKSYLRADYAIDCDSDRHKAFKLYAGFMILVYPIGIPVAFAVMLWRKRSMINPPKDILSAARVLHGSNPSQHEDERYGRPSEPDQRLSDRRIAQTAFLWRAYRPAAYYYEVLECFRRLLLTGCLVFILPNSAGQAAVACVLAVLTVAVFAFVSPYSDPDDHRAYTLGALAIFLTM 387
BLAST of mRNA_E-siliculosus-1a_F_contig1053.386.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 298 bits (764), Expect = 3.570e-82 Identity = 182/481 (37.84%), Postives = 259/481 (53.85%), Query Frame = 1 Query: 988 EGLDCDEPGVLQSTLPVASGYWRSSDDTTTIRECLYEEACKGGTVISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECT-EAFRAVMYLLAVLGGLLALACAWL---LFRYLIQEPVS--PGRFLSCRNSRMVSKVKELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSPSFYGRLVLTTVVP-IAFGLALCCTFMYAKSRTVRAGLPKANEGSSMRSINTVVSXXXXXXXXXXXXXXAPATAVTGTRNGHGMIMSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQTFACDTLDELGTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPKQALRDGVSPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYIMGAILIFLSM 2409
EG G +TL + GY+RSS +T IREC YE+AC+GG V+ + YCA GY GPYCAVC +G++ G + C C ++ R Y+++ +G L+ LA ++ L + P S P R+ R+ K LPL +KI +VV+QI+TQY+D+ V++P A+ L +DV+NLD+G++LS +C+ FY RL+LTT+ P + GL L CT++ M VVK RH+ V + F++Y+TVS +F+TF CD LD+ G ++LR+DYSL C T H YR YAG+MILVYP+GIP ++ W LF+HRH + KQ R ERR V K A LW+ Y+PS YYYEV+EC RR+ LTG VFI P+S+ Q + +L++ + + L PFA + LY G ++F SM
Sbjct: 583 EGAQTTSRGGTLATLEILPGYYRSSATSTDIRECFYEDACEGGKVVGE---YCAAGYTGPYCAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVLLAVVFMAAKLVSVVETTPSSKAPSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGL-LGCTYL---------------------------------------------------------------AMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDD-GNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHEL--KQEGR-----ERRAVLKPAAD---LWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASM 985
BLAST of mRNA_E-siliculosus-1a_F_contig1053.386.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI) HSP 1 Score: 293 bits (751), Expect = 1.760e-80 Identity = 244/909 (26.84%), Postives = 350/909 (38.50%), Query Frame = 1 Query: 511 CVDGNLGVYCPCF-----VATVTGEEECL----GETTTLELEAPSYELLAVGIQGTISSTLN----IT---------------AGIEGGPVVWKVEEVAEVHPTEALTWSIVPNVGILEEGGSATVAITGSLTSDFNGPTHTLFKAESRQ------------------------SGNTALAMVNTTFYYCLQGEYFN---DEE------CLLCSDLELDGEGLDCDEPGVLQSTLPVASGYWRSSDDTTTIRECLYEEACKGGTVISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAVMYLLAVLGGLLALACAWLLFRYLIQ-------------------------------------------------------------------EPVSPGRFLSCRNSRMVSKV-----------------------------------------------------------------------------------------------------------------------------------------KELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSP-SFYGRLVLTTVVPIAFGLALCCTFMYAKSRTVRAGLPKANEGSSMRSINTVVSXXXXXXXXXXXXXXAPATAVTGTRNGHGMIMS-EARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQTFACDTLDELGTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPK-------QALRDGVSPER---RLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYIMGAILIFLS 2406
C+DG+LGVYC C+ +A + E C+ G + L P+ + + G + TLN +T AG EGG V+W V + + W++ P+ G+L G S T+ + DFNG F+A+ G TA A + +F +C G Y+N D E C LC+D++ D +G++CDE G TLP+ SGYWR+S D+ IR+C E+AC+GG++++ +YC GY+GP CAVC SGY G++N CH CT +F+ MY + + LL L A LL YL+ E GRFL R + + LPL KLKI +VV+QI +A+IT V FPP + K L + + + D+GW++SA+C+ + FY +L+ G T M A A +A +G + S V RNG G E + + RH +++ +LVY+ VST+VFQ FAC+ E+G +FLRAD+ +EC TP+H Y+ YA +MI + + + L R R RI P Q R V E+ R D+ IA T LW AY P+RYYYEV EC RRLLLTG LVF++P++ GQ CV + ++ F LRP D D +LY G ++IF +
Sbjct: 747 CIDGDLGVYCQCYTRESSIAEGSPSETCVTGDPGLLSLTVLSEPADAVYPTMLDGDLLLTLNDDETVTTSSSAGGSGVALSAGAGTEGG-VIWNVSALVLSSEEGLMEWTVFPSTGLLLPGRSITLHVVTLPLDDFNGEATVSFQADGMSPPASLVAEAAAAVVVQTTSLADDGEGETAAASFDVSFVHCESGTYWNNSCDPEGDSVSCCELCTDVDGDEDGVNCDENGATTRTLPIQSGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRFHFSASGGGSSGGHPTKGSSALKSVGEESDGGESGGSGRFLGAWGRRKSASIGAPPPGAITTSSAAGSGPSSSVNDKGAGSKADSAGTVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLQPSAAPAVRGPXXXXXXXXXXXXXXXXXXXXXXXXXAARIGEMLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLLR--------GKGASRTAMAAA-----AAAERARQGRARPSARRV------------------------WRNGPGDESDLEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICI-------SFWYFLTRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFT 1610
BLAST of mRNA_E-siliculosus-1a_F_contig1053.386.1 vs. uniprot
Match: D8LRF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF7_ECTSI) HSP 1 Score: 279 bits (714), Expect = 1.000e-79 Identity = 149/407 (36.61%), Postives = 231/407 (56.76%), Query Frame = 1 Query: 481 EEEGSFSNQDCVDGNLGVYCPCFVATVTGEEECLGETTTLEL------------EAPSYEL-LAVGIQGTISSTLNITAGIEGGPV-VWKVEEVAEVHPTEALTWSIVPNVGILEEGGSATVAITGSLTSDFNGPTHTLFKAES--RQSGNTALAMVNTTFYYCLQGEYF--NDEECLLCSDLELDGEGLDCDEPGVLQSTLPVASGYWRSSDDTTTIRECLYEEACKGGTV---ISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAVMYLLAVLGGLLALACAWLLFRYLIQEPVSPGRFLSCRNSRMVSKVKELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSPSFYGRLVLTTVVPIAFGLALCCTFMY 1638
E G N+ C++G+LGVYC C+V+ V CLG + TL L +APS L L+ + + AG GG +W E+ + ++ W +VP+ G+ G + T+++ G +++ +NG + T+F AE+ ++ + +N +F YC G+Y+ ++ C++C+D+ L+ EGL CD G L TLP+A GYWRS++ +T IREC ++AC G V IS +DYC GY GPYCAVC+ GY G+S+ CH C ++ A M ++ L G++ + ++ L+ P S M +++ +P HKLKIP VV QI+TQYA IT+++F P F L + V+NLD+GWVL++ CI +FYG L+ TV P+ L L T++Y
Sbjct: 262 ELSGCSDNEGCIEGDLGVYCYCYVSVVDTTSTCLGSSGTLTLTGPDSVVSTTYPDAPSTSLVLSWNDSEALGADSQDGAGEPGGGAGLW---EIVWLDDPRSVAWVVVPSTGLAYPGENITISLNGEVSTYWNGESTTVFTAEAPHQEEVDPFATSINASFVYCNAGQYWVASETSCMMCADVALNPEGLSCDSEGTLLETLPLAEGYWRSTETSTNIRECFNDDACIGSEVSQRISSPNDYCDTGYMGPYCAVCMDGYTTGVSHTCHSCDGSYWAGMVVVMALTGVVLVVGVVIVLNDLVGNPALTD-LSETHFSVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATYLY 664 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1053.386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1053.386.1 >prot_E-siliculosus-1a_F_contig1053.386.1 ID=prot_E-siliculosus-1a_F_contig1053.386.1|Name=mRNA_E-siliculosus-1a_F_contig1053.386.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=804bp MKALACSFSGWEGPYVVLTGGELEMDLCDFRGSQAEVLVAATNASSPARIback to top mRNA from alignment at E-siliculosus-1a_F_contig1053:21006..31180+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1053.386.1 ID=mRNA_E-siliculosus-1a_F_contig1053.386.1|Name=mRNA_E-siliculosus-1a_F_contig1053.386.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10175bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1053:21006..31180+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1053:21006..31180+ >mRNA_E-siliculosus-1a_F_contig1053.386.1 ID=mRNA_E-siliculosus-1a_F_contig1053.386.1|Name=mRNA_E-siliculosus-1a_F_contig1053.386.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4824bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1053:21006..31180+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |