Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 0 |
| Cds size | 288 |
| Model size | 527 |
| Exons | 2 |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927554.7771692-UTR-E-siliculosus-1a_F_contig1053:8449..8688 | 1622927554.7771692-UTR-E-siliculosus-1a_F_contig1053:8449..8688 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1053 8450..8688 + |
| 1696318583.3613303-UTR-E-siliculosus-1a_F_contig1053:8449..8688 | 1696318583.3613303-UTR-E-siliculosus-1a_F_contig1053:8449..8688 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1053 8450..8688 + |
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1053.384.1 >prot_E-siliculosus-1a_F_contig1053.384.1 ID=prot_E-siliculosus-1a_F_contig1053.384.1|Name=mRNA_E-siliculosus-1a_F_contig1053.384.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=96bp
MPPCRSSQRPRGHGSKEEAAGKRMAASNCAANTKACRSSVCINRTCSSPV
VATCRDDGGGVPQRRGQLQKRQQEERRGGGISLDRRRHRRHRRGPA back to topmRNA from alignment at E-siliculosus-1a_F_contig1053:8450..12015+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1053.384.1 ID=mRNA_E-siliculosus-1a_F_contig1053.384.1|Name=mRNA_E-siliculosus-1a_F_contig1053.384.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3566bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1053:8450..12015+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCGTTGAGAGGATAGCTTATCCTCCCGAGACATCACGGAGGGTTTCAGGA
TATCAGCAGAAGGAGACAGAGAAGAGCGCTGCGTGTGTGGGGTGTGGCAA
TTGATCAGCGGTTGGTCCTGCGGCGGGAGACATTTACGCCATTGCAGCGA
CAGAGGGGGGGGACCAGGCCATCATCAGCAAGCTGCAGCAGCAAATTTTG
AACAGCGGCGGCGGCCGGCCCGCGCCTTGCGCGACCCCGATGCCTCCATG
TAGGTCATCGCAAAGGCCTCGAGGACACGGATCCAAGGAAGAGGCGGCGG
GGTGAGTGGCTTCGGTAGTAGAGAGAGAGCCCCACTGGTTTGGTGAAATC
ATCTCGCACTTGAGCAGACTCAAAAATCACAGCAGCGTAAATTGCCCCTG
TGGTGCGCCCCCACACGACCTATTGAATTTGTTCGAACGTCGAGCGTACA
TCACTTGCGTACATGTGGATATCTGTCTCCTATTTGAGGCGTGTTTTCTA
CCACCGTTAAGTGGTGCCGGTAGTCGCAAGCACCTTCGGAGAAGAACGGC
ATGCAGAGCCTCTGCGTTTCAAGCGCTTGTCGGGAAACCCGGCAGGATTA
CCGGCAGATCAAAGCTGAGATCAGAGATCATCCGTCTCTTGTTCTGTGTT
AGGCCGATTTGGACCAGATCATGGATCAAAGGCTGTGATTTTGATCCCTC
CAACAAGAGCATCGTCTCTGCATGGCGTGTGTGTGAGAGAATAATTGTGT
GTGCATCGCGAGGCTTGTGCGCAGAGAGATTTCACTACTGCTTTGCTGCA
GATTCAACGCGGACTTGTGTCTCGGCACCTGGACGTGCACTCAGTGCGTG
TGTGTTACGTATATATATATCCAGCATTGGGGTATGCATGTCAAAAATCC
CAGGGTGACTTTGTATGACCGTTGTCTCCAACAGCAGCAGTCTCCGATAG
TGCCCACTTTTGTCCCTGTCTCCAGTACCGCTTTTGCGGCTAAACCGGTG
TTCACAGCTTGCCAGGGAGACGACAGAGCAGTGCCTGCTGTCTGCCACAC
TTACGAAGCCCTTGGTAAGCGCCCTTGGCATGTTTTAAACGTCCGTCCAT
GTCGGTACCAAGCCTAGTCTACACGCCCGTCGTCGGAGCGAGAGAAAATT
CGAAAATTCCGAACTGCCTCGGAGATCGCTGATAATTGTTCGGTGTCTTG
GGGGGCTTGTTCAACAAGCATTGAACCGTGAACAGCGTGAGATGAGGAGG
ACGCGTCACGTGTTCCCGGTGACACTTGGAAGTGAAGACTGTTATGCATA
CATGCATATGCATGCATGTATACAACATGCATGCATACTCCGTATGCATA
TATCGCAAGCAATGACAGGGGCAGTGCCACCAGCAGAATCTCGGCAACAT
TAACTACCTGTGGGCTCCCCCCGCAAACTTGACCTTTGCAACACTGCGTA
CCATGAGGTTCACTACTGCTGCATGTTGTGTTCGTCCTATCGTACGTACT
TCGAAGTAGTTATTCAAGGCGACTAGGTTGCACTAGATTTACCTTGCTGT
CTTTTCCATGATTTAGCTGGTCTCTTTTTGTGTGATGCACCACCTCCGAA
TATTTTATTATTGCAAGGCTTTTTTTCCGGCTGTGATGAGGCACAGAAGC
TACTGTAGTTAGAGTACTTGCATTGTATTATGCATACCTACGTTAGCCTG
TGACCACGGAAATTGGCCGAGTCAAGTGATGGATTAGTACGGAGAGATTG
AGACAGAAGGAGGTACTGGATAGAGAGACCGGGATGGTTTTTAATGTGAA
GACAACAACAACAACAACAACAACAACAACAACATACCTCCGCTGCTATG
CACGTGTTACGAGGAGCGTATGCATACACAGAAGTACTGCTGTACGTTAC
TTTATTTCGTCCCGCCAATTGGCTACAATACGCTGCTGTAGTCAACTCTC
CGGTAGATGCCATGTTTGACCCACCAGCCGGGGTCACGCACGGTTGAAAA
TATGTACAAGTAGTTTTTTTTGTGCTCCACCCCTCCCCTGTGATTTTTTC
CAATTGATTTTTCCCTTCAACTTGTTGGAAAGCACAAGAAAGAAGGTTAA
GGTTTTGATGGTCAATGAATCCCTCGTGAGTTTCTCTCGACCATGCAACT
TTCCCACCTCTGCTAGATTTGCGACTTTTTGCACTTCACAGAGATTTGAA
CCCGCAATTTAGTGCTGTGAGTCAGAAAGAAGCTTTCGGGGTTGCATGCA
CACTTATTAAGTTCACCATCGGCGACGCGACCAGCTGTTGACTGCAACAC
CTCAACACAACAATGGACGATGCACTCAAGCCACGGCAGTTGTGAGGTTC
CTGTGCCTGAAAGAAAATTCAAGCTTCTTCATTTAAAAAGTCGTTGCCCT
CTGGGAGCACATGTACGAGAGAAATTGCTTCTTTATAAATATCTTCGCGC
GGAACGCTCCGCTATCAAGCTATGCATGGACAACTTCCTGCGCAACTACC
CGATTCGCGGACTCGGCGTAGTCGCAGCCCTTCCCTTTTGGTTTAGAGAA
CACATTTGCTAGAAATTATACTTCTTGAAAGTAATTTAATTTCTATCTCA
AGCTCGTGACACGTGCCCCCGAAGAATTCTACTGATGTTTTTTTGCTTGC
AGTGTCAACAATGGTTGACGAGACATCTGGTGCATGTCTATGATACGACC
AACAACGTCATCACACGCAGTTTTTTTTGTCCACCATCACAAGAGTACCA
TGTGCCTCGTCTTGGCCTCGGCACATGCGGCAGCAGGTCGTGTTACGCCT
GCGGGAGAGATGTAGACCAGGCTTGTGTTCAGGAGTACAGCAGCAGCATT
ACCAAGGCATGTTTGTCGTCGTCGACAGAAACTGACACGAAGAAGCCCAA
TATATTGACAATCTTTATCTTTTGCTGTCCCCAGTATCAAGTCCGGTATC
ATGCTCAATACCGACTTTTTTACGATTGTTTTTTGGCTCAAAGAAATCTG
CCTCTATGGATACGTTGCGCTATCCGGGCGGCGGTGTGTAGCGATGGTCT
TGAAGTGTTTGGTGTTTCATTGAGTTAAGATCCGTTGATGGATAGGTACC
GTAGCTCGCTTCGCGCATTTGAGCTGAAGGAAGGGTAGGATTCCTTGTCC
TTCAGGAGGCACCCAACACGCGTGACAATCAATCGCCGTGCTCCTCTCCT
TGATGACAGCTGCGGGCGTGTCGACGTAAGCGGTGTAAAAAAACGGCGTC
CTATGTGTGCCATCTGTCTTATCTGGCCTTCATCTAACGGTGCCCTCCCC
CCCCCCCACTCCCCCCCGCGTGCTGTTTCGCCCGCGTCAGAAAAAGGATG
GCCGCTAGTAATTGTGCTGCCAACACCAAGGCGTGCAGAAGTAGCGTTTG
TATAAATAGGACATGTTCGAGTCCAGTCGTAGCGACATGCCGTGACGACG
GTGGCGGCGTACCACAACGTCGTGGACAACTACAGAAACGACAACAAGAA
GAGCGGCGTGGCGGCGGTATTTCCCTCGATCGGCGTCGACATCGTCGGCA
TCGCCGGGGGCCGGCG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1053:8450..12015+ >mRNA_E-siliculosus-1a_F_contig1053.384.1 ID=mRNA_E-siliculosus-1a_F_contig1053.384.1|Name=mRNA_E-siliculosus-1a_F_contig1053.384.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=576bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1053:8450..12015+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCTCCATGTAGGTCATCGCAAAGGCCTCGAGGACACGGATCCAAGGA
AGAGGCGGCGGGATGCCTCCATGTAGGTCATCGCAAAGGCCTCGAGGACA
CGGATCCAAGGAAGAGGCGGCGGGAAAAAGGATGGCCGCTAGTAATTGTG
CTGCCAACACCAAGGCGTGCAGAAGTAGCGTTTGTATAAATAGGACATGT
TCGAGTCCAGTCGTAGCGACATGCCGTGACGACGGTGGCGGCGTACCACA
ACGTCGTGGACAACTACAGAAACGACAACAAGAAGAGCGGCGTGGCGGCG
GTATTTCCCTCGATCGGCGTCGACATCGTCGGCATCGCCGGGGGCCGGCG
AAAAAGGATGGCCGCTAGTAATTGTGCTGCCAACACCAAGGCGTGCAGAA
GTAGCGTTTGTATAAATAGGACATGTTCGAGTCCAGTCGTAGCGACATGC
CGTGACGACGGTGGCGGCGTACCACAACGTCGTGGACAACTACAGAAACG
ACAACAAGAAGAGCGGCGTGGCGGCGGTATTTCCCTCGATCGGCGTCGAC
ATCGTCGGCATCGCCGGGGGCCGGCG back to top
|