prot_E-siliculosus-1a_F_contig1052.377.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1052.377.1
Unique Nameprot_E-siliculosus-1a_F_contig1052.377.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length1243
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1052.377.1 vs. uniprot
Match: A0A6H5JE89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE89_9PHAE)

HSP 1 Score: 1276 bits (3302), Expect = 0.000e+0
Identity = 931/1224 (76.06%), Postives = 967/1224 (79.00%), Query Frame = 0
Query:   44 LPGDQG-AAAGPAAAPIAEPSHPGEGKGKQGDGEXDATGKEGEGCCSGEGSPGGDGHTKEEGHEEAGAGAPGSGSNRENTSEATKRALGEEHQPAVERKKKMRKKLNKCLICLEEDDGLSRRLFMTDCCHLIAHEQCFEEWKAFHSRCFACPRKTQTRRKDNRYLSNTVMSNDVDVEEDTAEERIISDGFEEGWYAGAKKQFAQTREKERAEEERQSLACVLDVLAMEAKTSDGQARDSGGTLDEGGGGASAAGPLLSTFTEAQIAQQAALLAPCDDERIARQLEEADRAQAEEFAQQAKKDXXXXXXXXXXXXXXXXXKAAADAIARTRRPRAKSKGSGGRSGXXXXXXXXXXXXXXXXXXGCGAKNRGRLPAGGCRRSGSAPLPPALAADGSGGAEMEGVEGTCTGGGGSRPSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDVDGGARRYLDSTGLTSDEESIGDDETKDADYVDAEEKREGRRKRARSTPPKHGPRASSASPTTSTSSPSAXXXXXXXXXRTASSPGDGGVGGVDVRQGRGGGASVSTTENGGCRGDXXXXXXXXXXXXXXXXXXXANGG---PHVNGNGNVSTASSIGGFTPTVAVSDSAASSAAGRVASVSSRSARVAAKWSPSDLGIDPDQQVEKEEDSRDPRRSEVVRAGSGGGQSGKRKGARGSPEGGAKDANGCEFSNANGSSQRSQTPDSGPPLKQTKNAKPRQSNGSGSANGGKCGSGSARRRNEETGTKR--------------------RLEAPGFASNAIKTKATPKTGKTGKGGGAGTVGGGSHHTVSGGVSERIISGSVRKPLVTPGIPPSSDNTKITTTKRCKKGKGGEAGAVGGG-SSSRPSMSPGFASSTDNPETXLKQGXXXXXXXXXXXXXGGLAGGKGGSHSGRNRDGETGTKRLPETRSDDTGDDGSGERASRVVVHKRRPSNTDEAKIVAKQDGGXXXXXXGSDTKGEFSLLPNNRGVAGGGVEQASGPGGGSKKNGDREIDEPPNTEDSDVIRDDDPEDDICMLNISVGGRAESILSPSRAATPQVGPEVAAGVAFKPMASESTLARASKAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSPGARVKRGGRDELSCSDSDGAADGRRHGDQGNSGIARALPTDVEVFDLTMGDD 1242
            LPG+QG  A GPAAAPIAEPSH GE KGKQGDG  DA         S EGSP GDG  KE    EAGAGAP SGSNREN SE TKRA  EE QPAVER+KKMRKKLNKCLICLEEDDGLSRRLF TDCCHLIAHEQCFEEWKAFHSRCFAC RKTQTRRKDNRYLSNTV+SN+ DVEED AE RIISD FE GWY GAKKQFAQ REKERAEEER+SLACVLDVLAMEAKT++ +AR SGG           AGPLLS FT+ QIAQQAALLAPCDDERIAR+LEEADRAQAEEFAQQAKKDXXXXXXXXXXXXXXXXXKAAADAIARTRRPRAKSKGSGGRSG    XXXXXXXXXXXXXX   AKNRGRLPAGGCRRSG+A LPPALAADGSGGAEMEGVEGTCTGGGGSRPSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     TGDVDGGARR+LDSTGLTSDEESIGDDETKDADYVD EEKRE R KR RSTPPKHGPRASSASPTT       XXXXX    RTASSPG GGVG VDVRQGR   AS STTEN GCRGD      XXXXXXXXXXXXX       P VNGNGNVSTASSIGGFTPTVA SDSA SSA GRVASVSSRS RVAAK S SDLGIDPDQ+VEKEEDSRDP RSE++R GSGGGQSG  KG  GSPEGG KDANGCEFS+ANGSSQRSQTPDSG PLKQTKN KPR+SNG GS NGGK  S                                  R EAP F+SNAIKTK TPK  K GKGGG+GT+ GG HH VSGGVSER++SGS+RKPLVTP +PPSSDNTKIT+TKRCK GKGGEAG VGGG SSSRPSM+PGFAS TD PET  KQG         XXXX    GGK                    T SDDT   GSGERA+RVVVHK+RPSNTDEAKI+ KQDGG      GSDTK + SLLPNNRGVAGGG +QASGPGGGS KNGDREIDEPPNTEDSDVIRD DPE+DICMLNISVGGRAE IL P+RAAT +VGPEVAAGVAF PMASESTLA ASKAAT                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  SPGARVKRGGRD+LSCSDSDGA   R  GD+GNS IARALP DVEVFDLTM DD
Sbjct:   45 LPGEQGPTAVGPAAAPIAEPSHLGEEKGKQGDGAGDAXXXXXXXXGSREGSPDGDGRQKE--WHEAGAGAPESGSNRENASEVTKRAPDEERQPAVERQKKMRKKLNKCLICLEEDDGLSRRLFQTDCCHLIAHEQCFEEWKAFHSRCFACARKTQTRRKDNRYLSNTVISNEADVEEDIAEARIISDSFE-GWYVGAKKQFAQIREKERAEEERKSLACVLDVLAMEAKTNNEEARVSGGAXXXXXXXXXXAGPLLSAFTKEQIAQQAALLAPCDDERIARELEEADRAQAEEFAQQAKKDXXXXXXXXXXXXXXXXXKAAADAIARTRRPRAKSKGSGGRSGHGARXXXXXXXXXXXXXXXXXAKNRGRLPAGGCRRSGAASLPPALAADGSGGAEMEGVEGTCTGGGGSRPSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENRETGDVDGGARRFLDSTGLTSDEESIGDDETKDADYVDPEEKREVRSKRVRSTPPKHGPRASSASPTTXXXXXXXXXXXXNPIVRTASSPGVGGVGSVDVRQGRXXXASASTTENDGCRGDDDSILGXXXXXXXXXXXXXXXXXXXXPLVNGNGNVSTASSIGGFTPTVAFSDSAVSSAPGRVASVSSRSQRVAAKSSHSDLGIDPDQKVEKEEDSRDPGRSEIIRVGSGGGQSGNGKGXXGSPEGGVKDANGCEFSSANGSSQRSQTPDSGSPLKQTKNTKPRESNGGGSTNGGKGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPEAPVFSSNAIKTKTTPKPDKAGKGGGSGTIDGGGHHAVSGGVSERVVSGSIRKPLVTPRLPPSSDNTKITSTKRCKTGKGGEAGTVGGGGSSSRPSMTPGFASCTDGPETTRKQGKSVKGGEVGXXXXXSHGGGKXXXXXXXXXXXXXXXXXXXXTHSDDTSSGGSGERANRVVVHKQRPSNTDEAKIITKQDGGSGVNGSGSDTKDDVSLLPNNRGVAGGGEKQASGPGGGSTKNGDREIDEPPNTEDSDVIRDGDPEEDICMLNISVGGRAEGILPPNRAATLKVGPEVAAGVAFNPMASESTLALASKAATTTAVKTASPRRHVMGGKMPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGARVKRGGRDDLSCSDSDGAVGERHQGDKGNSDIARALPADVEVFDLTMSDD 1265          
BLAST of mRNA_E-siliculosus-1a_F_contig1052.377.1 vs. uniprot
Match: D8LG43_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG43_ECTSI)

HSP 1 Score: 1225 bits (3169), Expect = 0.000e+0
Identity = 943/1234 (76.42%), Postives = 972/1234 (78.77%), Query Frame = 0
Query:   47 DQGAAAGPAAAPIAEPSHPGEGKGKQGDGEXDATGKEGEGCCSGEGSPGGDGHTKEEGHEEAGAGAPGSGSNRENTSEATKRALGEEHQPAVERKKKMRKKLNKCLICLEEDDGLSRRLFMTDCCHLIAHEQCFEEWKAFHSRCFACPRKTQTRRKDNRYLSNTVMSNDVDVEEDTAEERIISDGFEEGWYAGAKKQFAQTREKERAEEERQSLACVLDVLAMEAKTSDGQARDSGGTLDEGGGGASAAGPLLSTFTEAQIAQQAALLAPCDDERIARQLEEADRAQAEEFAQQAKKDXXXXXXXXXXXXXXXXXKAAADAIARTRRPRAKSKGSGGRSGXXXXXXXXXXXXXXXXXXGCGAKNRGRLPAGGCRRSGSAPLPPALAADGSGGAEMEGVEGTCTGGGGSRPSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDVDGGARRYLDSTGLTSDEESIGDDETKDADYVDAEEKREGRRKRARSTPPKHGPRASSASPTTSTSSPSAXXXXXXXXXRTASSPGDGGVGGVDVRQGRGGGASVSTTENGGCRGDXXXXXXXXXXXXXXXXXXXANGG---PHVNGNGNVSTASSIGGFTPTVAVSDSAASSAAGRVASVSSRSARVAAKWSPSDLGIDPDQQVEKEEDSRDPRRSEVVRAGSGGGQSGKRKGARGSPEGGAKDANGCEFSNANGSSQRSQTPDSGPPLKQTKNAKPRQSNGSGSANGGK---------------------------CGSGSARRRNEETGTKRRLEAPGFASNAIKTKATPKTGKTGKGGGAGTVGGGSHHTVSGGVSERIISGSVRKPLVTPGIPPSSDNTKITTTKRCKKGKGGEAGAVGGGSSSRPSMSPGFASSTDNPETXLKQGXXXXXXXXXXXXXGGLAGGKGGSHSGRNRDGETGTKRLPETRSDDTGDDGSGERASRVVVHKRRPSNTDEAKIVAKQDGGXXXXXXGSDTKGEFSLLPNNRGVAGGGVEQASGPGGGSKKNGDREIDEPPNTEDSDVIRDDDPEDDICMLNISVGGRAESILSPSRAATPQVGPEVAAGVAFKPMASESTLARASKAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGG--------SPGARVKRGGRDELSCSDSDGAADGRRHGDQGNSGIARALPTDVEVFDLTMGDD 1242
            +QGAA  PAAAPIA+ SHPG          X                     H KEEGHEEAGAGA GSGSNREN SE TKRALGEEHQPAV+R+KK +KKLN CLIC EEDDGLSRRLFMTDCCHLIAHEQCF+EWK   SRCFACPRKTQTRRKDNRYL NTV+SNDVDVEEDTAEERI+SD F E WY  AK +FAQ REKERAEEERQSLACVLDVLAMEAKT++G+AR SGGT DEG    SA GPLLS FT+AQIAQQAALLAPCDDERIAR+LEEADRAQAEEF+QQAKKDXXXXXXXXXXXXXXXX KAAADAIARTRRPRAKSKGSGGRSG    XXXXXXXXXXXXXX               RRSGSA LPPALAADG GGAEMEGVEGTCTGGGGSRPSGS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDVDGGARRYLDSTGLTSDEESIGDDET DADYVDAEEKRE RRKR RSTPPKHGPRASSASP+TST    A         R ASSPGDGGVGGVDVRQGRGGGAS STTEN GCRGD XXXXXXXXXXXXXXXXXX       P VNGNGNVSTASSIGGFTPTVAVSDSA SSAAGRVASV      VAAK S  DLGIDPDQ+VEKEEDSRDP RSEV+RAGSGGGQSGKRKGA GSPEGG  D NGCEFSNANGSSQRSQTPDSG  LKQTKN KPRQSNG GSANGGK                                A RRNEETGTKRR +APGFASNAIKTK TPK GKTGKGGG+G +GGGSHH VS  VSE I+SGSVRKPLVTPGIPPSSDNTKITTTKRCK GKGGEAG VGGGSSSRPSMSPGFAS   NP+T LKQG       XXXXXX   AGGK                    TRSDDTG  GSGERA+RVVVHK+RPSNTDEAKI+ KQDG XXXXXX                                   GDREIDEPPNTEDSDVIRDDDPEDDIC+LNISV GRAESILSP+RAATPQVGPEVAAGVAFKPMASESTL RASKAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  G        SPGARVKRGGR ELSCSDSDGAADGRR GDQGNS IARALP DVEVFDLT+GDD
Sbjct:   47 EQGAAXXPAAAPIAKTSHPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKKEEGHEEAGAGALGSGSNRENASETTKRALGEEHQPAVKRQKKTQKKLNTCLICREEDDGLSRRLFMTDCCHLIAHEQCFQEWKTHSSRCFACPRKTQTRRKDNRYLRNTVISNDVDVEEDTAEERIVSDNFGEEWYMRAKNEFAQNREKERAEEERQSLACVLDVLAMEAKTNNGEARASGGTQDEGXXXXSAGGPLLSAFTKAQIAQQAALLAPCDDERIARELEEADRAQAEEFSQQAKKDXXXXXXXXXXXXXXXXEKAAADAIARTRRPRAKSKGSGGRSGHDARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGSASLPPALAADGFGGAEMEGVEGTCTGGGGSRPSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDVDGGARRYLDSTGLTSDEESIGDDETNDADYVDAEEKREVRRKRVRSTPPKHGPRASSASPSTSTXXXXARARTSNPTVRPASSPGDGGVGGVDVRQGRGGGASGSTTENDGCRGDDXXXXXXXXXXXXXXXXXXXXXXXXXPLVNGNGNVSTASSIGGFTPTVAVSDSAVSSAAGRVASVXXXXXXVAAKSSHLDLGIDPDQKVEKEEDSRDPGRSEVIRAGSGGGQSGKRKGAGGSPEGGVNDTNGCEFSNANGSSQRSQTPDSGSRLKQTKNTKPRQSNGGGSANGGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRRNEETGTKRRPDAPGFASNAIKTKTTPKPGKTGKGGGSGAIGGGSHHAVSXXVSECIVSGSVRKPLVTPGIPPSSDNTKITTTKRCKTGKGGEAGTVGGGSSSRPSMSPGFASXXXNPDTTLKQGKSVKDGEXXXXXXXSHAGGKXXXXXXXXXXXXXXXXXXXXTRSDDTGSGGSGERANRVVVHKQRPSNTDEAKIITKQDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDREIDEPPNTEDSDVIRDDDPEDDICVLNISVDGRAESILSPNRAATPQVGPEVAAGVAFKPMASESTLVRASKAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGAGAAATGESPGARVKRGGRGELSCSDSDGAADGRRQGDQGNSSIARALPADVEVFDLTIGDD 1280          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1052.377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JE89_9PHAE0.000e+076.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG43_ECTSI0.000e+076.42RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 250..270
NoneNo IPR availableCOILSCoilCoilcoord: 334..367
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 126..204
e-value: 1.9E-5
score: 25.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 151..194
score: 8.816

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1052contigE-siliculosus-1a_F_contig1052:12687..22678 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1052.377.1mRNA_E-siliculosus-1a_F_contig1052.377.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1052 10956..22678 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1052.377.1 ID=prot_E-siliculosus-1a_F_contig1052.377.1|Name=mRNA_E-siliculosus-1a_F_contig1052.377.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1243bp
MSGKGKGRVNVNSEDGTIQMEEEEEEEVSGFEHDRGGGGGAGLLPGDQGA
AAGPAAAPIAEPSHPGEGKGKQGDGEGDATGKEGEGCCSGEGSPGGDGHT
KEEGHEEAGAGAPGSGSNRENTSEATKRALGEEHQPAVERKKKMRKKLNK
CLICLEEDDGLSRRLFMTDCCHLIAHEQCFEEWKAFHSRCFACPRKTQTR
RKDNRYLSNTVMSNDVDVEEDTAEERIISDGFEEGWYAGAKKQFAQTREK
ERAEEERQSLACVLDVLAMEAKTSDGQARDSGGTLDEGGGGASAAGPLLS
TFTEAQIAQQAALLAPCDDERIARQLEEADRAQAEEFAQQAKKDEDLARE
LQRLDEAEAEEKAAADAIARTRRPRAKSKGSGGRSGHGARGGDEGGGSDA
GKGSGCGAKNRGRLPAGGCRRSGSAPLPPALAADGSGGAEMEGVEGTCTG
GGGSRPSGSGGSGASKAASSSSSETKDTQMKKRKTQQEEKNKKTEKSETG
DVDGGARRYLDSTGLTSDEESIGDDETKDADYVDAEEKREGRRKRARSTP
PKHGPRASSASPTTSTSSPSARARTSSPTVRTASSPGDGGVGGVDVRQGR
GGGASVSTTENGGCRGDDDSILGGAARGAERRSGGGANGGPHVNGNGNVS
TASSIGGFTPTVAVSDSAASSAAGRVASVSSRSARVAAKWSPSDLGIDPD
QQVEKEEDSRDPRRSEVVRAGSGGGQSGKRKGARGSPEGGAKDANGCEFS
NANGSSQRSQTPDSGPPLKQTKNAKPRQSNGSGSANGGKCGSGSARRRNE
ETGTKRRLEAPGFASNAIKTKATPKTGKTGKGGGAGTVGGGSHHTVSGGV
SERIISGSVRKPLVTPGIPPSSDNTKITTTKRCKKGKGGEAGAVGGGSSS
RPSMSPGFASSTDNPETTLKQGKSVKGGEAGALPGGGLAGGKGGSHSGRN
RDGETGTKRLPETRSDDTGDDGSGERASRVVVHKRRPSNTDEAKIVAKQD
GGGGGNGSGSDTKGEFSLLPNNRGVAGGGVEQASGPGGGSKKNGDREIDE
PPNTEDSDVIRDDDPEDDICMLNISVGGRAESILSPSRAATPQVGPEVAA
GVAFKPMASESTLARASKAATTAAVKTASRRRHVMGGKQPKKTKEQGGGA
DGAGGRGLRASAAAAHGDGAAAVAAAAGAAAAGATTGGSPGARVKRGGRD
ELSCSDSDGAADGRRHGDQGNSGIARALPTDVEVFDLTMGDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD