prot_E-siliculosus-1a_F_contig10.36.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10.36.1
Unique Nameprot_E-siliculosus-1a_F_contig10.36.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length251
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10.36.1 vs. uniprot
Match: A0A6H5KHY4_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHY4_9PHAE)

HSP 1 Score: 471 bits (1211), Expect = 3.110e-167
Identity = 235/255 (92.16%), Postives = 241/255 (94.51%), Query Frame = 0
Query:    1 MFRIFDPYAMALSLLVGGVGFCTTFYFNTEMSEWGKDEIAYPMMAMIYVYARNARFFESDEESSAKILEGHGSGGA-----VAEGEDGKFQAPSPVGVPGLVTVKGPPLAAPKAGSLAVVFFFATWCDSCEQVLPAFLAVAARYIDEGISFAGVTQEGEEELRYFVETYQRSLRPVTLLADEQGVLTAGYQGQHRAKTIPHCYIVRGGSGDTGAGAGFGVVEWHGHPARLEAALGYLMDDDEAREDTVEGEGVRT 250
            MFRIFDPYA+ALSLLVGGVGFCTTFYFNTE+SEWGKDEIAYPMMAMIYVYARNARFFESDEESSAKIL GHG G        AEGEDGKFQ PSPVGVPGLVTVKGPPLAAPKAGSLAVVFFFATWCDSCEQVLPAFLAVAARYIDEGISFAGVTQEGEEELRYF+ETYQRSLRPVTLLADEQGVLTAGYQ ++RAK IPHCYIVRG SGDTGAGAGFGVVEWHGHPARLEAALGYLMD+DEAREDTVEGEGVRT
Sbjct:    1 MFRIFDPYAVALSLLVGGVGFCTTFYFNTEISEWGKDEIAYPMMAMIYVYARNARFFESDEESSAKILGGHGGGXXXXXXKAAEGEDGKFQVPSPVGVPGLVTVKGPPLAAPKAGSLAVVFFFATWCDSCEQVLPAFLAVAARYIDEGISFAGVTQEGEEELRYFIETYQRSLRPVTLLADEQGVLTAGYQRENRAKAIPHCYIVRGVSGDTGAGAGFGVVEWHGHPARLEAALGYLMDNDEAREDTVEGEGVRT 255          
BLAST of mRNA_E-siliculosus-1a_F_contig10.36.1 vs. uniprot
Match: A0A7S2Y039_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y039_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.390e-24
Identity = 75/236 (31.78%), Postives = 117/236 (49.58%), Query Frame = 0
Query:    3 RIFDPYAMALSLLVGGVGFCTTF-YFNTEMSEWGKDEIAYPMMAMIYVYARNARFFESDEESSAKILEGHGSGGAVAEGEDGKFQAPSPVGVPGLVTVKGPPLAAPKAGSLAVVF-FFATWCDSCEQVLPAFLAVAARYIDEGISFAGVTQEGEEELRYFVETYQRSLRPVTLLADEQGVLTAGYQGQHRAKTIPHCYIVRGGSGDTGAGAGFGVVEWHGHPARLEAALGYLMDDD 236
            R FD +A+  +L++  +GFC ++ Y   E   +   E   P+   +YVY RNARFF+ D + ++      G G A  +        P    + GL  ++G   ++P  GS  +V  F+ATWC   ++ L       A + D+G+    +++E    LR F+ +  RSL     LA E G LT  YQ     KT+PH Y++ G SG          VEWHGHP +++A L  ++ +D
Sbjct:   31 RFFDAFALIQALVLAAIGFCLSWWYLGWEYLTYR--EFLLPIGCAVYVYMRNARFFQEDGDGTS------GKGSAKDQ-----ISKPLAAELEGLTFLQG---SSPSMGSGPIVLLFWATWCGHSKKSLVPLNRTHASFKDQGVQVVAISREEVGVLREFLPSVGRSL--AYALASEDGRLTQKYQRAFGVKTVPHAYVI-GRSGR---------VEWHGHPTQIDAVLDEVISND 238          
BLAST of mRNA_E-siliculosus-1a_F_contig10.36.1 vs. uniprot
Match: A0A7S0LWB5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LWB5_9CRYP)

HSP 1 Score: 63.2 bits (152), Expect = 1.450e-8
Identity = 45/136 (33.09%), Postives = 66/136 (48.53%), Query Frame = 0
Query:   96 LVTVKGPPLAAPKAGSLAVVFFFATWCDSCEQVLPAFLAVAARYIDEGISFAGVTQEGEEELRYFVETY-QRSLRPVTLLADEQGVLTAGYQGQHRAKTIPHCYIVRGGSGDTGAGAGFGVVEWHGHP-ARLEAAL 229
            L  V+G     PKAG++ VV F+ATWC  C + +P    +  RY D+G+   G++ E  +++R FVE   Q+   PV    D + V  + Y  Q     IP  ++V             G V W GHP A L+ A+
Sbjct:   64 LTYVQGDAAERPKAGTVTVVEFWATWCPPCVRSIPHLSELYTRYKDQGLDVVGISNESVDKVRPFVEKMGQKFNYPVA--CDPRSVNASNYPVQG----IPAAFLV----------GRDGTVLWSGHPMAGLDQAV 183          
BLAST of mRNA_E-siliculosus-1a_F_contig10.36.1 vs. uniprot
Match: UPI001E3F1CAD (TlpA family protein disulfide reductase n=2 Tax=unclassified Rhodopirellula TaxID=2624920 RepID=UPI001E3F1CAD)

HSP 1 Score: 65.1 bits (157), Expect = 1.620e-8
Identity = 40/142 (28.17%), Postives = 65/142 (45.77%), Query Frame = 0
Query:  108 KAGSLAVVFFFATWCDSCEQVLPAFLAVAARYIDEGISFAGVTQEGEEELRYFVE---------TYQRSLRPVTLLADEQGVLTAGYQGQHRAKTIPHCYIVRGGSGDTGAGAGFGVVEWHGHPARLEAALGYLMDDDEARE 240
            K G++ VV F+ATWC  C Q +P  + +  +Y D+G+    ++ E  E +   ++         T++      TL  D  G  T  Y    +   IP  ++V    G TG      ++EW GHP RL+  L  +++    RE
Sbjct:   66 KEGNVYVVEFWATWCGPCIQSMPHLVELQEKYRDQGVQIVSISDEDLETVEGILDRDYPGKEGVTFKELTSAYTLTVDPDGSSTDDYMRAAQQNGIPAAFLV----GKTG------LIEWIGHPMRLDDPLEQVLEGTWDRE 197          
BLAST of mRNA_E-siliculosus-1a_F_contig10.36.1 vs. uniprot
Match: A0A517MLY1_9BACT (Thiol-disulfide oxidoreductase ResA n=1 Tax=Roseimaritima multifibrata TaxID=1930274 RepID=A0A517MLY1_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 2.550e-6
Identity = 40/142 (28.17%), Postives = 61/142 (42.96%), Query Frame = 0
Query:  108 KAGSLAVVFFFATWCDSCEQVLPAFLAVAARYIDEGISFAGVTQEGEEELRYFVE---------TYQRSLRPVTLLADEQGVLTAGYQGQHRAKTIPHCYIVRGGSGDTGAGAGFGVVEWHGHPARLEAALGYLMDDDEARE 240
            ++G + +V F+ATWC  C   +P       +Y D+G+    V++E  E +  F+E         TY+      +L  D        Y        IP  +IV G SG         ++EW GHP R+E  L  ++ D   RE
Sbjct:   63 ESGKVYIVEFWATWCGPCIAAMPHLSETQQKYADQGVQLISVSREPLETVETFLEKPVRNEEDKTYRELTSTYSLTCDPDRSTFEDYFQAAGQTGIPCAFIV-GKSG---------LIEWIGHPMRMEEPLEQVLADKWDRE 194          
BLAST of mRNA_E-siliculosus-1a_F_contig10.36.1 vs. uniprot
Match: A0A517SB39_9PLAN (Thiol-disulfide oxidoreductase ResA n=1 Tax=Caulifigura coniformis TaxID=2527983 RepID=A0A517SB39_9PLAN)

HSP 1 Score: 58.2 bits (139), Expect = 3.300e-6
Identity = 41/142 (28.87%), Postives = 61/142 (42.96%), Query Frame = 0
Query:   99 VKGPPLAAPKAGSLAVVFFFATWCDSCEQVLPAFLAVAARYIDEGISFAGVTQEGEEELRYFVETYQR------SLRPVTLLADEQGVLTAGYQGQHRAKTIPHCYIVRGGSGDTGAGAGFGVVEWHGHPARLEAALGYLMD 234
            VKG  +   K G + VV F+ATWC  C   +P    +  +Y D+     GV+ E   ++  F++  Q+      +     L  D  G     Y      + IP  +IV             GVVEW GHPAR++  L  ++D
Sbjct:   60 VKGEKVDGFKPGQVYVVEFWATWCGPCLATMPHLAELQTKYGDKA-QMIGVSTEETSKVADFLKDEQKEGVTWDATITYRLAMDVDGKTNEAYMSAAGERGIPTAFIV----------GREGVVEWIGHPARMDEPLAKVVD 190          
BLAST of mRNA_E-siliculosus-1a_F_contig10.36.1 vs. uniprot
Match: A0A5M6D8G9_9BACT (Redoxin domain-containing protein n=1 Tax=Roseiconus nitratireducens TaxID=2605748 RepID=A0A5M6D8G9_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 6.070e-6
Identity = 38/140 (27.14%), Postives = 60/140 (42.86%), Query Frame = 0
Query:  109 AGSLAVVFFFATWCDSCEQVLPAFLAVAARYIDEGISFAGVTQEGEEELRYFV--------ETYQRSLRPVTLLADEQGVLTAGYQGQHRAKTIPHCYIVRGGSGDTGAGAGFGVVEWHGHPARLEAALGYLMDDDEARE 240
            +G++ VV F+ATWC  C   +P    +   Y D G+    V+ E  +E+   +        E++       +L  D  G     Y      + IP  ++V    G TG      +VEW GHP +L+  L  ++D    RE
Sbjct:   58 SGTVYVVEFWATWCGPCISSMPHLAQLQNEYRDRGVRIVSVSDESLDEVEALLKKPYPQKEESFADVTSAYSLTTDPDGSTHRDYMQAAEQRGIPTSFVV----GKTG------LVEWIGHPMKLDEPLAAVVDGTWDRE 187          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10.36.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KHY4_9PHAE3.110e-16792.16Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A7S2Y039_9STRA1.390e-2431.78Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0LWB5_9CRYP1.450e-833.09Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
UPI001E3F1CAD1.620e-828.17TlpA family protein disulfide reductase n=2 Tax=un... [more]
A0A517MLY1_9BACT2.550e-628.17Thiol-disulfide oxidoreductase ResA n=1 Tax=Roseim... [more]
A0A517SB39_9PLAN3.300e-628.87Thiol-disulfide oxidoreductase ResA n=1 Tax=Caulif... [more]
A0A5M6D8G9_9BACT6.070e-627.14Redoxin domain-containing protein n=1 Tax=Roseicon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 109..195
e-value: 6.8E-9
score: 35.7
NoneNo IPR availableGENE3D3.40.30.10coord: 100..205
e-value: 4.4E-12
score: 48.0
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..250
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 67..204
score: 8.842
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 109..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10contigE-siliculosus-1a_F_contig10:20340..23380 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10.36.1mRNA_E-siliculosus-1a_F_contig10.36.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10 20297..24537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10.36.1 ID=prot_E-siliculosus-1a_F_contig10.36.1|Name=mRNA_E-siliculosus-1a_F_contig10.36.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=251bp
MFRIFDPYAMALSLLVGGVGFCTTFYFNTEMSEWGKDEIAYPMMAMIYVY
ARNARFFESDEESSAKILEGHGSGGAVAEGEDGKFQAPSPVGVPGLVTVK
GPPLAAPKAGSLAVVFFFATWCDSCEQVLPAFLAVAARYIDEGISFAGVT
QEGEEELRYFVETYQRSLRPVTLLADEQGVLTAGYQGQHRAKTIPHCYIV
RGGSGDTGAGAGFGVVEWHGHPARLEAALGYLMDDDEAREDTVEGEGVRT
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR013766Thioredoxin_domain
IPR000866AhpC/TSA