mRNA_E-siliculosus-1a_F_contig1648.3669.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1648.3669.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1648.3669.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1648.3669.1 vs. uniprot
Match: A0A6H5KMR3_9PHAE (Ribosomal RNA-processing protein 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR3_9PHAE)

HSP 1 Score: 565 bits (1455), Expect = 8.630e-190
Identity = 291/297 (97.98%), Postives = 293/297 (98.65%), Query Frame = 1

Query:  529 MSAAGHIIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVTEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRMRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEGDAAGTGSVAPKAETLTRQRKQHAETETIGEVRASICRVRNAIVALRNVFHLVMPESIMSVYRRSVTMGLHPKDMLSGEAVLALTAKEAT 1419
            MSAAGHIIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRV EVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQR+RTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEGDAAGTGSVAPKAETLTRQRKQHAETETIGEVR +ICRVRNAIVALRNVFHLV PESIMSVYRRSVTMGL PKDMLSGEAVLALTAKEAT
Sbjct:    1 MSAAGHIIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVAEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRIRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEGDAAGTGSVAPKAETLTRQRKQHAETETIGEVRTNICRVRNAIVALRNVFHLVTPESIMSVYRRSVTMGLQPKDMLSGEAVLALTAKEAT 297

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BLAST of mRNA_E-siliculosus-1a_F_contig1648.3669.1 vs. uniprot
Match: D8LIC4_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC4_ECTSI)

HSP 1 Score: 512 bits (1319), Expect = 5.630e-167
Identity = 257/284 (90.49%), Postives = 265/284 (93.31%), Query Frame = -3

Query: 2534 QQRTARPHSLCSNYRMQLDSPKQQHLDDGKYLQVRYEDFATLPTVVAELVYCWAGLGPLPPTVATWIDEHTKMPNCDAARGPRTRRRMATRLVATAASHEGCGGSMAVLVSGCEQEEQQHREIGHTGALRKPGNLRKWSSPGEASFSVPVGESAGPIRASHRQSNSSREAARDTEPFDLQGYATLVPASGTTAMSTGTTNGSPPVRPNSRKALEAAAGTAGADEGTGGDCVNQKRYSDQHPYDTKRHSSAMVDLWRQQMPQADAKAVWDACQPSRVMEELGYSL 3385
            + R A    LCSNYRMQLDSPKQQHLDDGKYLQ+RYEDFATLPTVVAELVYCWAGLGPLPPTVATWIDEHTKM NCDAA GPRTRRRMAT LVATAASHEGCGGSMAVLVSGCEQ EQ HREIGHT ALRKPGNLRK SSPG ASFSVPVGESAGP+ ASHRQSNSSRE ARDTEPFDLQGYATLVPA+G TA+STGTTNGSPPVRPN+RKALEAAAGTAGAD+GTGGDCVNQKRYSDQHPYDT RHSSAMVDLWRQQMPQADA+AVWDACQ SRVMEELGYSL
Sbjct:  180 ESRRAVGQYLCSNYRMQLDSPKQQHLDDGKYLQLRYEDFATLPTVVAELVYCWAGLGPLPPTVATWIDEHTKMSNCDAAHGPRTRRRMATSLVATAASHEGCGGSMAVLVSGCEQGEQHHREIGHTDALRKPGNLRKRSSPGGASFSVPVGESAGPVPASHRQSNSSREPARDTEPFDLQGYATLVPANGATAVSTGTTNGSPPVRPNARKALEAAAGTAGADKGTGGDCVNQKRYSDQHPYDTTRHSSAMVDLWRQQMPQADAQAVWDACQASRVMEELGYSL 463

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BLAST of mRNA_E-siliculosus-1a_F_contig1648.3669.1 vs. uniprot
Match: D8LIC3_ECTSI (Ribosomal RNA-processing protein 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC3_ECTSI)

HSP 1 Score: 456 bits (1173), Expect = 2.370e-148
Identity = 234/237 (98.73%), Postives = 234/237 (98.73%), Query Frame = 1

Query:  529 MSAAGHIIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVTEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRMRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEGDAAGTGSVAPKAETLTRQRKQHAETETIG 1239
            MSAAGHIIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVTEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRMRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEGDAAGTGSVAPKAETLTRQRKQHAET   G
Sbjct:    1 MSAAGHIIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVTEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRMRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEGDAAGTGSVAPKAETLTRQRKQHAETVKSG 237

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BLAST of mRNA_E-siliculosus-1a_F_contig1648.3669.1 vs. uniprot
Match: A0A6H5KKM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKM2_9PHAE)

HSP 1 Score: 377 bits (968), Expect = 5.590e-119
Identity = 201/271 (74.17%), Postives = 208/271 (76.75%), Query Frame = -3

Query: 2537 NYRMQLDSPKQQHLDDGKYLQVRYEDFATLPTVVAELVYCWAGLGPLPPTVATWIDEHTKMPNCDAARGPRTRRRMATRLVATAASHEGCGGSMAVLVSGCEQEEQQHREIGHTGALRKPGNLRKWSSPGEASFSVPVGESAGPIRASHRQSNSSREAARDTEPFDLQGYATLVPASGTTAMSTGTTNGSPPVRPNSRKALEAAAGTAGADEGTGGDCVNQKRYSDQHPYDTKRHSSAMVDLWRQQMPQADAKAVWDACQPSRVMEELGYS 3349
            NY MQLDSPKQQHLD GKYLQVRYEDFATLP VV EL+  WAGLGPLPPTVA WIDEHTKMPNCD A GPRTRRRM T LVATAASHEGCGGSMAVLVSGCEQ+EQ HREIGHTGALRKP NLRK                                     EPFDLQGYAT VPASGTTA+STGTTNGSPPVRP+SRK L         DEGTGGDC+NQKRYSDQHPYDTKR+SSAMV+LWRQQMPQADAKAVWDACQ SRVMEEL YS
Sbjct:    3 NYLMQLDSPKQQHLDHGKYLQVRYEDFATLPIVVDELLG-WAGLGPLPPTVAMWIDEHTKMPNCDVAHGPRTRRRMVTSLVATAASHEGCGGSMAVLVSGCEQDEQHHREIGHTGALRKPENLRK------------------------------------REPFDLQGYATSVPASGTTAVSTGTTNGSPPVRPDSRKVLL-------YDEGTGGDCINQKRYSDQHPYDTKRYSSAMVNLWRQQMPQADAKAVWDACQASRVMEELDYS 229

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BLAST of mRNA_E-siliculosus-1a_F_contig1648.3669.1 vs. uniprot
Match: A0A836CMW4_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW4_9STRA)

HSP 1 Score: 367 bits (942), Expect = 3.140e-114
Identity = 189/286 (66.08%), Postives = 225/286 (78.67%), Query Frame = 1

Query:  550 IVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVTEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRMRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSL-PDTGVDVILGTNGNVWISRTPPEEWKG-KEEGDAAGTGSVAPKAETLTRQRKQHAETETIGEVRASICRVRNAIVALRNVFHLVMPESIMSVYRRSVTMGLHPKDMLSGEAVLAL 1401
            IVVPGQ IT+  G+LRGHGTY++E  DGG P+L+ACVAGVVERVNKLISVRP+KSRYIGEVGDLVVGRVTEV  KRW V+VG H+ A+LMLSSVNLPGG QR RTYEDQLQMR+FF+E+DLISAEVQQ+  DG I LHTRSLKYGKLENGQL+ VP VL++RLKQH ++L P  GVDV+LGTNG VWI+R  P EW G   EG    T  +  KAETL + R+ HAET  + + R  ICRVRNA+V L++ F L+ P++I +VY RSV  G+  KDML  EA+ +L
Sbjct:    4 IVVPGQVITAEGGFLRGHGTYIQESEDGGEPQLIACVAGVVERVNKLISVRPVKSRYIGEVGDLVVGRVTEVGGKRWKVDVGGHQDAILMLSSVNLPGGAQRKRTYEDQLQMRTFFKENDLISAEVQQIQQDGSIVLHTRSLKYGKLENGQLLRVPQVLVKRLKQHFITLAPPIGVDVVLGTNGRVWITRAMPAEWTGGTSEGADMDTNVLTSKAETLMQLRRLHAETPILRDERERICRVRNAVVTLQHAFALITPDAIAAVYARSVEAGMAAKDMLQAEALASL 289

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BLAST of mRNA_E-siliculosus-1a_F_contig1648.3669.1 vs. uniprot
Match: A0A1V9YN11_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN11_9STRA)

HSP 1 Score: 285 bits (728), Expect = 6.580e-84
Identity = 154/266 (57.89%), Postives = 193/266 (72.56%), Query Frame = 1

Query:  538 AGHIIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVTEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRMRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEGDAAGTGSVAPKAETLTRQRKQHAETETIGEVRASICRVRNAIVALRNVFHLVMPESIMSVY 1335
            A +++V PGQ ITS  G+LRGHGTYVE G      +LLA VAGVVE+VN+L+SVRP+ SRYIGEVGD+VVGR++EV SKRW V++   + AVLMLSSVNLPGG QR RTYEDQLQMRSFF+E +LISAEVQ+V  DG + LHTRSL+YGKLENGQL++V P L++RLKQH++ LP  G+DVILG NG +W+SR+         E DA    +   +A+  T ++  HA T T  E R  I +V NAI  L   F  + PESIM++Y
Sbjct:   27 AQYVVVTPGQVITSEPGFLRGHGTYVENG------ELLASVAGVVEKVNQLVSVRPLVSRYIGEVGDIVVGRISEVGSKRWKVDINGQQDAVLMLSSVNLPGGAQRRRTYEDQLQMRSFFEESELISAEVQEVRYDGTMWLHTRSLRYGKLENGQLITVQPSLVKRLKQHMLQLP-IGIDVILGCNGYIWVSRS--------IEHDAESLTTNESRADVWTERKATHAATVTSAEDRKKIAKVTNAIAQLNTRFQTITPESIMALY 277

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BLAST of mRNA_E-siliculosus-1a_F_contig1648.3669.1 vs. uniprot
Match: A0A067C1K3_SAPPC (Ribosomal RNA-processing protein 4 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C1K3_SAPPC)

HSP 1 Score: 278 bits (710), Expect = 1.100e-81
Identity = 151/268 (56.34%), Postives = 190/268 (70.90%), Query Frame = 1

Query:  538 AGHIIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVTEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRMRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEGDAAGTGSVAPKAETLTRQRKQHAETETIGEVRASICRVRNAIVALRNVFHLVMPESIMSVYRR 1341
            A +++V PGQ ITS  G+LRGHGTYVE G      +LLA VAGVVE+VN+L+SVRP+ SRYIGEVGD+VVGR++EV SKRW V++   + AVLMLSSVNLPGG QR RTYEDQLQMRSFF+E +LISAEVQ+V  DG + LHTRSL+YGKLENGQL++V P L++RLKQH++ LP  G+DVILG NG +WI+R        + E DA    +   +A+  T ++  HA T T    R  I  V N +  L   F  + PESIM +Y +
Sbjct:    6 AQYVVVTPGQVITSEPGFLRGHGTYVENG------ELLASVAGVVEKVNQLVSVRPLVSRYIGEVGDIVVGRISEVGSKRWKVDINGQQDAVLMLSSVNLPGGAQRRRTYEDQLQMRSFFEESELISAEVQEVRYDGTMWLHTRSLRYGKLENGQLIAVQPALVKRLKQHMLQLP-IGIDVILGCNGYIWIAR--------RIEHDAESLTTNESRADVWTERKATHAATPTDAADRKKIAAVYNVLSTLNAQFKTITPESIMELYEQ 258

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BLAST of mRNA_E-siliculosus-1a_F_contig1648.3669.1 vs. uniprot
Match: A0A024TPI1_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TPI1_9STRA)

HSP 1 Score: 278 bits (710), Expect = 2.520e-81
Identity = 151/276 (54.71%), Postives = 190/276 (68.84%), Query Frame = 1

Query:  508 HEGVATSMSAAGHIIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVTEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRMRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEGDAAGTGSVAPKAETLTRQRKQHAETETIGEVRASICRVRNAIVALRNVFHLVMPESIMSVY 1335
            H+        + +++V PGQ ITS  G+LRGHGTYVE G      +LLA VAG+VE+VN+L+SVRP+ SRYIGEVGD+VVGR+++V +KRW V++   + AVLML+SVNLP G QR RT EDQLQMRSFF+E DLISAEVQ+V  DG + LHTRSL+YGKLENGQL+ V P LI+RLKQH+V LPD GVDVILG NG +WI+R+  E      + +          A+  T ++  H  T T   VR  I RV NA+ +L   F L+ PESIM  Y
Sbjct:   18 HDSATLERLRSQYVVVTPGQVITSEPGFLRGHGTYVEAG------ELLASVAGIVEKVNQLVSVRPLVSRYIGEVGDIVVGRISDVGNKRWKVDINGQQDAVLMLTSVNLPSGAQRRRTTEDQLQMRSFFEEGDLISAEVQEVRYDGTMWLHTRSLRYGKLENGQLIVVQPSLIKRLKQHLVQLPDIGVDVILGCNGYLWITRSMDEIVTDGAQNELT--------ADAWTERKVAHTNTVTGASVRREIARVYNALASLNARFRLISPESIMDTY 279

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BLAST of mRNA_E-siliculosus-1a_F_contig1648.3669.1 vs. uniprot
Match: A0A5D6Y3M5_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3M5_9STRA)

HSP 1 Score: 277 bits (709), Expect = 3.360e-81
Identity = 152/272 (55.88%), Postives = 198/272 (72.79%), Query Frame = 1

Query:  526 SMSAAGHIIVV-PGQEITSVQG-YLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVTEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRMRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEGDAAGTGSVAPKAETLTRQRKQHAETETIGEVRASICRVRNAIVALRNVFHLVMPESIMSVY 1335
            +++ A H++VV PGQ I++  G +LRGHGTY+         +L+A VAGVVE+VN+LISVRP+ SRYIGEVGD+VVGRVTEV SKRW V+V   + A LMLSSV LPGG QR RTYEDQLQMR+FF E+DLISAE+Q+V  DG +ALHTRSL+YGKLENGQ V V P L++R+KQH+V+LP  GVD+ILGTNG +W++R+      G ++      G++  + E L  +R+QHA T+   + R  I RV  A++ L   F L+ PESIM+VY
Sbjct:   18 ALADAQHVVVVTPGQVISTETGAFLRGHGTYMSNN------ELVASVAGVVEKVNQLISVRPLASRYIGEVGDIVVGRVTEVASKRWKVDVNGQQDASLMLSSVTLPGGAQRRRTYEDQLQMRNFFVENDLISAEIQEVRYDGSLALHTRSLRYGKLENGQFVRVAPSLVKRVKQHMVTLPGIGVDLILGTNGYLWVTRSLAA--LGGDDHALDDAGNMETRVEILMEKRQQHAATKMSVDDRRKIARVHRALLQLNERFRLITPESIMAVY 281

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BLAST of mRNA_E-siliculosus-1a_F_contig1648.3669.1 vs. uniprot
Match: K3X3G6_GLOUD (Ribosomal RNA-processing protein 4 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3G6_GLOUD)

HSP 1 Score: 278 bits (710), Expect = 4.520e-81
Identity = 148/265 (55.85%), Postives = 195/265 (73.58%), Query Frame = 1

Query:  547 IIVVPGQEITSVQG-YLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVTEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRMRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEG-DAAGTGSVAPKAETLTRQRKQHAETETIGEVRASICRVRNAIVALRNVFHLVMPESIMSVY 1335
            ++V PGQ I++  G +LRGHGTY++  T+    +L+A V GVVE+VN+LI+VRP+ SRYIGEVGD+VVGR+TEV +KRW V+V   + A LMLSSV LPGG QR RTYEDQLQMR+FF E+DLISAE+Q+V  DG ++LHTRSL+YGKLENGQ V V P L++R+KQH+V+LP  GVD+ILGTNG +W+SR+      G +   D   TG++  + E L  +R+QHA T+   + R  I RV  A++ L   F L+ PESIM+VY
Sbjct:   39 VVVTPGQVISTETGAFLRGHGTYLDHQTN----ELIASVTGVVEKVNQLITVRPLVSRYIGEVGDIVVGRITEVANKRWKVDVNGQQDASLMLSSVTLPGGAQRRRTYEDQLQMRNFFVENDLISAEIQEVRYDGSLSLHTRSLRYGKLENGQFVQVAPHLVKRMKQHMVTLPGIGVDLILGTNGYLWLSRSFTALNGGDDSSMDDLSTGNMETRVEILMEKRQQHANTKMSVDDRKKIARVYRALLHLNEQFRLITPESIMAVY 299

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1648.3669.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1648.3669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KMR3_9PHAE	8.630e-190	97.98	Ribosomal RNA-processing protein 4 n=1 Tax=Ectocar...	[more]
D8LIC4_ECTSI	5.630e-167	90.49	Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta...	[more]
D8LIC3_ECTSI	2.370e-148	98.73	Ribosomal RNA-processing protein 4 n=1 Tax=Ectocar...	[more]
A0A6H5KKM2_9PHAE	5.590e-119	74.17	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CMW4_9STRA	3.140e-114	66.08	Ribosomal RNA-processing protein 4 n=1 Tax=Tribone...	[more]
A0A1V9YN11_9STRA	6.580e-84	57.89	Ribosomal RNA-processing protein 4 n=1 Tax=Achlya ...	[more]
A0A067C1K3_SAPPC	1.100e-81	56.34	Ribosomal RNA-processing protein 4 n=2 Tax=Saprole...	[more]
A0A024TPI1_9STRA	2.520e-81	54.71	Ribosomal RNA-processing protein 4 n=1 Tax=Aphanom...	[more]
A0A5D6Y3M5_9STRA	3.360e-81	55.88	Ribosomal RNA-processing protein 4 n=1 Tax=Pythium...	[more]
K3X3G6_GLOUD	4.520e-81	55.85	Ribosomal RNA-processing protein 4 n=1 Tax=Globisp...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1648	contig	E-siliculosus-1a_F_contig1648:3118..10234 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	894
Model size	3651
Exons	9
Ec32 ortholog	Ec-24_001630.1
Ec32 ortholog description	Rrp4 is a component of the exosome 3'->5' exoribonuclease complex, a complex that degrades mRNAs.
Hectar predicted targeting category	other localisation
BRITE	ko00000,ko00001,ko00002,ko01000,ko03019
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	J
EC	2.7.1.158
EggNOG OGs	COG1097@1,KOG3013@2759
EggNOG free text desc.	nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription
GOs	GO:0000175,GO:0000176,GO:0000177,GO:0000178,GO:0000184,GO:0000228,GO:0000288,GO:0000291,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000785,GO:0000790,GO:0000956,GO:0001558,GO:0002252,GO:0002376,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005652,GO:0005654,GO:0005694,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006403,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0008298,GO:0008312,GO:0008408,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009615,GO:0009892,GO:0009893,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016075,GO:0016078,GO:0016180,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019219,GO:0019222,GO:0019439,GO:0022613,GO:0030307,GO:0031123,GO:0031125,GO:0031126,GO:0031323,GO:0031329,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0034399,GO:0034427,GO:0034470,GO:0034472,GO:0034475,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0040008,GO:0042254,GO:0043144,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043487,GO:0043488,GO:0043628,GO:0043632,GO:0043633,GO:0043634,GO:0043928,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0045927,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051179,GO:0051252,GO:0051607,GO:0051641,GO:0051704,GO:0051707,GO:0060147,GO:0060149,GO:0060255,GO:0060968,GO:0060969,GO:0061013,GO:0065007,GO:0065008,GO:0070013,GO:0070478,GO:0070481,GO:0070651,GO:0070727,GO:0071025,GO:0071027,GO:0071028,GO:0071029,GO:0071031,GO:0071033,GO:0071034,GO:0071035,GO:0071038,GO:0071042,GO:0071043,GO:0071046,GO:0071047,GO:0071049,GO:0071051,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0098542,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1903311,GO:1905354
KEGG Module	M00132,M00390,M00391
KEGG Pathway	ko00562,ko01100,ko03018,ko04070,map00562,map01100,map03018,map04070
KEGG Reaction	R05202
KEGG ko	ko:K03679,ko:K10572
KEGG rclass	RC00002,RC00078
Preferred name	EXOSC2
Seed eggNOG ortholog	2880.D8LIC3
Seed ortholog evalue	3.1e-127
Seed ortholog score	461.5
Taxonomic scope	Eukaryota

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928153.9505684-UTR-E-siliculosus-1a_F_contig1648:3117..3645	1622928153.9505684-UTR-E-siliculosus-1a_F_contig1648:3117..3645	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1648 3118..3645 +
1696318826.1686597-UTR-E-siliculosus-1a_F_contig1648:3117..3645	1696318826.1686597-UTR-E-siliculosus-1a_F_contig1648:3117..3645	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1648 3118..3645 +
1622928154.0776107-UTR-E-siliculosus-1a_F_contig1648:8005..10234	1622928154.0776107-UTR-E-siliculosus-1a_F_contig1648:8005..10234	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1648 8006..10234 +
1696318826.2759233-UTR-E-siliculosus-1a_F_contig1648:8005..10234	1696318826.2759233-UTR-E-siliculosus-1a_F_contig1648:8005..10234	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1648 8006..10234 +

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1648.3669.1	prot_E-siliculosus-1a_F_contig1648.3669.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1648 3646..8005 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1648:3118..10234+
coding sequence from alignment at E-siliculosus-1a_F_contig1648:3118..10234+

protein sequence of mRNA_E-siliculosus-1a_F_contig1648.3669.1

>prot_E-siliculosus-1a_F_contig1648.3669.1 ID=prot_E-siliculosus-1a_F_contig1648.3669.1|Name=mRNA_E-siliculosus-1a_F_contig1648.3669.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=298bp
MSAAGHIIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVER
VNKLISVRPIKSRYIGEVGDLVVGRVTEVQSKRWSVEVGAHRSAVLMLSS
VNLPGGQQRMRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLK
YGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPE
EWKGKEEGDAAGTGSVAPKAETLTRQRKQHAETETIGEVRASICRVRNAI
VALRNVFHLVMPESIMSVYRRSVTMGLHPKDMLSGEAVLALTAKEAT*

mRNA from alignment at E-siliculosus-1a_F_contig1648:3118..10234+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1648.3669.1 ID=mRNA_E-siliculosus-1a_F_contig1648.3669.1|Name=mRNA_E-siliculosus-1a_F_contig1648.3669.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7117bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1648:3118..10234+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CGTCGCTCGCTCCCAGTATTGCTGTCGCATCGAACGGTACGGCCTTGAGA
TACGCTGTTATAAGCAGGAGGGCAACAGCGGTGTGCGGTGTGGCCCCTGG
TCGCCAGAGAAGGCGGTGTGCGCCTGCGTATTGTACACTCAACAGGAATC
CAGGTGTGTTGGTGGATAGAGCAGGTCCTGAGCAGCCTAGTGCTACGACT
CAGACACCACCGCCATCCCCGATCGACTTTGGGGATCACTGGTTCAAGGT
GCTCGTCTGGGTTTGGTGTCGGTGGTACCAGTTGCACCAATCGCTACCTG
TGGCGTGGTGACAGCGGTTGTAGAAAACAAGCGCGGTCTAAACGGACACC
ACGCGGGACTGTCAAGTTGGTCGCATCCGGACACCACTCTCGACGCCGCC
AGCGAAGGCGCAAGTAGCCCACCCTCTGTCTACAGCCACCGCGCGCGCTG
GTGATGTCTGGTTGAGTTGAGTTGCTGCATCAACGAGGCAACGGTTTTTC
ACCAGGGCACGAGGGCGTCGCAACAAGCATGAGTGCTGCCGGGCACATCA
TCGTGGTACCGGGGCAGGTGAGCCGAGATCGTCAAAAGCACCTCGGCTGT
GCTAAGCGCACACCCGCATAAGCAACCTTGAGCACGGACGAGCTGTGGTG
GACCCGTAGGAACTGTTTCCTCTTTTCAGATGCGCTCTTTCAGATTCCAT
AAAAGGCGGAGGAGGTTGCCTCAACCGCATACAAAACAGGCTCTTTTGAA
GTAGCGACGAAAGGCTTGAGTAGCACCTGAACCTTCATCTATGCATACCT
AACGTGTAGAATTTCGGTGTTCTCCAAAGACCTGATGGTGATTGCGCGGT
ACTACCTAGCTCTTGATGGACCTTGTTCACCGTCAGGCATTCTCGTGTTT
CGGCGTTCTAAACAGTTTCTAGAAACGCGATGCGTTACGGATCTGTGGAC
ACCGATGTTGTGGGGTCTCGGAACGGGTCACCCACCACCCATCTCAACGC
AACCGTGGAGAATTCCACCCACTCTCCCTTCTCACCCCGCAAACGCAAAA
TCTCGTGTGCATACTCCTTGCCTGCACCCCTAGGAGATAACCTCTGTGCA
AGGATACCTCCGGGGGCATGGGACGTACGTGGAGGAGGGGACGGACGGCG
GGCCTCCCAAGCTACTGGCATGCGTGGCCGGAGTGGTCGAGAGGGTGAAC
AAGCTCATCTCTGTCCGGCCAATCAAATCCAGGTGCCTGCTGCCTTCCCT
TCAATCGTTTTCATGCCGCCACTTTCCACAGCCGGGTCTCGCCCGTGCGA
TCCGCACTTGGACAGCTCCAGGCAAGACAGTGGCTGCGTTCGCGTAATCT
CTTGACCGGGTTTCATCTCATTATGTTCCTGGCGCCCTTTGCTCGAAATC
ACAACTGACGCCTGTCTTTGCTGCTGGTCCTGAAACGCTATTTTGACTGA
AGGTACATCGGCGAGGTAGGGGACCTTGTCGTGGGAAGGGTGACGGAAGT
ACAATCGAAACGCTGGAGCGTGGAGGTGAGCAAGCGGGACGCACACCGTG
ACCCCACCGCAATCTGGTGTCCCCCGCTCCCCGTATGTTTCCTGGTGCAC
TCTTTGGGTGTCTTGGCTTGGTGTTTGTGGATTGGTTGTCGGGACCACTG
ATTCTGGCACATCCGGTAGTTGGTGATTGGGTTGTGGTGTGCCTGGATTA
TCTGTCCTCATCCATAGCCCTGGCATCGACCTTGACCTGCTTTCGGGTGA
TGCTGTAGAACAACTCCCTGGGTTGTCGCGACATTCCGCGCGATGAAACG
AAAACATCCGGTGAACGACACCGTCTATCCTACCGTACAACGTGCAATAG
ACAGCAGTGCCCCCTCCCCCCAACACGCACCACCTTCGTGCTGATTTTTA
CACTGCACGGGAAACACTTCCCCATATGATCTAAGTAGAGCTTCATCTGT
GAGCTAGTTGCTTGTGGCACATGATCAAAAGTCCGAACTCGCTTTCCCTC
AATCCGGTTCCGCCCCGTTTCGCCGTGCCGGGTAGGTCGGTGCGCACAGA
AGTGCGGTGTTGATGCTTAGCTCCGTGAACCTTCCGGGTGGGCAGCAGAG
AATGAGGACCTACGAGGACCAGCTTCAGATGCGTTCGTTCTTCCAGGAGC
ACGACCTCATCAGCGTGAGTGCTCTGGTGCATCTTTTCGTGTTTGTTTGT
TGGCTGTTCTTCCCCCGAGGACATGGAATCTTCCTTCGTGGGAATATTCC
TTGGTGTTGTCGGTGTTCGGACGTTCGTGGTGACGCGGGTGGCAGTAGGT
GTGAGGCGGTCAGTGTCAGATGTTGCTGTTCGGCAAGGGTTTGAGTCGAT
TTGTGTTTCATTGGCCTCCTCTTGTTGTTGGCCTGTTTCCTATTGTGCTT
GCCGCTGCTGTAAGAGTTCAGTAGACTCTTGAAAATCAACGCAGAAACGC
GGTATTCCGTACCGACCCGCCCAACATACGGACAATGCAAAGTCTTCGTT
GACTGTCTACCGTCACCAACCATAAGGAACAACGGCAGACTGGTAGTGTA
CCATGTTTTTTTTTGTGTTTTCCTTCCACAGGCTGAAGTCCAACAGGTCA
ACTCGGACGGAGGAATCGCTCTCCACACCAGAAGCCTCAAGTATGGCAAG
GTGTGTGGTCTTGCTGTCGGGTGCTGGAGGCAATAGTGACGCTTCGGTTT
CCACCGTGTATGTGTCGTATGTGCGTCTCTTAGGCCAAGCTTTGTTTGTT
TGTACCATGTTGTTTCCATCGGTTGCTATTGGTGAGCAACAGTATGGCGA
AAACTCGACCTTTTCGATCAACGCACCAGCTGGAGACTGGTACTTGGGCA
GTGAGAGTGGCGATGGGGGGTCACGGAGGCCCTTTCTGAAAGCTACGCAA
ACACTTCAAAGGGTACCACAGGGCGCACACCCCATCGTGTCATCCTACCC
CCCCCCCCTTTTCCTGAAGAGCTCCCAAATGTTGGTGGTGTCTCTAGTAG
GGGTAGGAACGGTGCTCCGTCTCGAAAGGGACGCGTGGTCAATGGTCAAA
TGACTACGGCAAGCAACAAATGAGTACGTNNNNNNNNNGGGGGGGGGGGG
CGCGGCCGCCCCGAAAGGAAGCGGGGGTAAAACTTCAAAGGGTAACACAG
AGCGCAAAACCCGTCGTGCCCCCCCCCCCCCCCCCCCTTTTCCTGAAAAC
TCTCCCCCGATGTGCGCCTGTTTTCCTCGCCAAGCTGGAGAACGGGCAGC
TAGTTTCGGTGCCCCCCGTGCTGATCCGAAGACTGAAGCAGCACGTGGTG
TCTCTGCCGGATACGGGCGTCGACGTCATCCTGGGGACCAACGGGAACGT
CTGGATTTCGAGTGAGTTTTCCGTCGTTGCCCCGCCCACCCTACTGTATC
ACTCACTTCCAGGTTTTCGGTTTTGGCCAGGACGGGTATTCCTCGCGGAG
TCTTCTTTGAGGTCCGAGCCGATTCCCTCCGCTGGGGTTGATGATAACGG
TTGTGGTTGGGCAAGAATGTCTGCGTTGCAAAGCGAGGTTCTGCTTTTTG
ATGTGTGGTATGTTGTTTCCCAGCGAAGCGTCGTCTCTGAGGACTTGCTT
TCTTCAGAACTGAGATCCTTTTGCAGTGTATTCCTGCTTTTCGAGACCGG
TTTTGGGACGTGTTGCTGCGGTACGTGGGTTGTGCAATCACAGCTTTATA
CGTGGGAGTACCTGCTTCTCTCTTGACACTGGGCTCCCCGGAAACCTAAT
TTTACGTTAGATTCCTGTGGCGTAGCAGTCAAGGGTTGCATTTGATGTTT
ATTTTGTTCTCGTTTCGCGGATGTATGGTACCGTGCGTGTTTTGTTTTCT
TTTTTCGTGCTTTCAAAACAGGAACACCTCCCGAAGAGTGGAAGGGCAAG
GAGGAGGGAGACGCGGCTGGCACGGGGAGCGTGGCTCCAAAGGCTGAGAC
GCTCACACGCCAACGAAAACAGCACGCTGAGACGGTAAAGAGCGGCGCAT
TGGTTACAGCTGGTTTGCACGGTGACGAGCAGTAGCCGTGCCAGGGATAC
CGCACCCAATTGTCTCTGCCGCCATTTTAGATCTTGCGGTCATCTACGTG
GCTCGCATTTTATCATCAACGACTACTGGTGTCTCTCTCTCCCCCGCCTC
CATTTCGGTCGTTGTTTGCCATATCTCTCGTATCGATGTCCTGGCAGTAC
AGCAAACCAATGAGTTGGGGAATTTTTTGGACGCCTCTTTTTGCCCGCGA
AACCAGAATCGGGTAGAGCGCCAAATGCAAGCTCGTAATTTCCGATCGCG
ATGCCACTCCCATCACCATATGGCATGGCGATCAACGCCCAACCCGTCAG
TCATCAGGTTTTCCCCAGGACACTTCTAGCTAGCAAGGTCCGCGGACATC
TTGTGCCTTCTGTGAAGTGTTGAAAACTACGGGCCCCTCGATGTGTGCGT
TTCGCGGTGGTTCCGCCCTCGCTGTGCTTCCGTCTGCCGCAGGAGACGAT
AGGGGAGGTTAGGGCGAGTATCTGTCGGGTGAGGAACGCCATCGTGGCCC
TGAGGTGAGCGGTCCCTTCGGCCGCCCAGAAACAAACTGTCTTGGTTGTT
TGAAAATGTTCCTTCGACAATGCCGTTGTAGTAGAAAACAAGGCGTCAAT
CCGAACTCTTGTCGAAGTTTCTCGAACTCGTTTCGGATTTTTTCCGGAGC
GTTTTGCCTACCCTTTGTACCCGTCCGTGTTCTTGCCTTTTTTTTTTTTT
TGCAGGAATGTGTTTCACCTGGTGATGCCCGAGTCCATCATGTCCGTGTA
CCGGAGGAGCGTCACCATGGGATTGCATCCGAAAGACATGCTGTCAGGAG
AGGCTGTGCTTGCACTCACCGCCAAGGAAGCAACCTAAGTTTTACTCTTT
TTTCCACTTCTGCGGATTTGGGTAGCAAGTTTGTATCTTTCGGAAAGGAA
AAGACCCAATTATGACGTTCTCTGTCTGGGCCATCTTCTACTCCCTGACC
AACATTTGGCGCTATTAATAGCAATACTCCGGCGGTAGTTTCACTGCGAT
CTGAAGGGCAAGAAGTTATGTTCGGTGGCGAAAGAACTACCTACGTGCTT
CGCCAAGTGTTATTCCGGTCCGAAACACTACAGCGTCATTGGCCGTCGCT
TGGGCGCTGGTGGTGCAGTACCAGGCCGCGGGAGTGGGTGGTTTCTGCGT
CGCTCCTTGTGGTGTATCGAGCTTTGACAGCTGCAGTCATGAGCCGGATG
GGCCTTTCTACCCATGAGCGAGACATTGGATGTAGGGAAAAGAAGGTGTG
CGTGTGACAAAAGTCAGTGATTGAGGGAGGCCCAAATCGTCGCTCGACTA
AATAAGTATCTAGATGTCTCGAGCCTTCAACATTTGAACCCCTTTGGATT
GCGTATTCTATGAGAAATGTCGTATCAAGACCGTCTCATCCCTTGGAGGA
CACATGTGGCGTGAGAGCGTGGCACCACCCGAGCTGAATATCTCGACTTG
GTGTCCAACGTAAGACCAATACTTTTTTCGCGAAGGGCAAGATTGAGAGT
TTTGCCTCATCGGCCCCGCTAACAACTGTCAAATCCACGCAATCACAGCA
GTGACGTTTCCAGACGTGAGCTGTCCTTGTTCGCCTATGGCCCACCACAA
CAACACAAACAGACCCAGTCCGCTGATCGGGAAATGGTGCATGAGCGCAT
CCAATCCGCGGTCCAATCAAACTAGGCGAGTTCGAAAAACGACGCCCACG
AACAACGGGACACAAAAACGTACGTAAGAGATGGCATCGTTGTGATCCGA
AGAACCTTCACATTGTTGCAAGCACCCCAGTACCTGCAGAATGGTCGGCG
ACATAGCCTAAAAGACTAGACGAAGATTTGAGTACTCGTGTATCCTCAAG
CGTACGTGACACACGGAGGCCACCCTTGCCAATCATGTTAGCACCCATCC
TCGGCGTCTGAAGCCGATCAATATCGGTCGCCCACTTCGTCATTCGTCAG
AGTGAGTATCCTAGCTCCTCCATGACCCTGGACGGTTGGCAAGCGTCCCA
AACGGCCTTCGCGTCCGCTTGCGGCATCTGTTGTCGCCACAGGTCTACCA
TGGCCGAGGAGTGCCGCTTTGTGTCGTAGGGATGCTGGTCGGAGTAACGC
TTCTGGTTGACGCAGTCCCCGCCGGTGCCTTCGTCGGCGCCGGCGGTACC
GGCCGCAGCCTCGAGGGCCTTTCGAGAATTCGGTCGTACAGGAGGGCTCC
CGTTGGTTGTTCCAGTAGACATCGCTGTTGTTCCACTTGCCGGAACCAAC
GTGGCATATCCCTGTAGGTCAAAGGGTTCCGTATCGCGCGCAGCCTCCCT
GCTTGAATTTGACTGCCGGTGGCTGGCACGAATAGGCCCCGCACTCTCAC
CTACGGGTACAGAAAAGGAAGCTTCGCCAGGGCTGGACCACTTTCTCAGG
TTCCCTGGCTTCCGCAAGGCGCCGGTGTGGCCTATCTCCCGGTGTTGTTG
CTCTTCTTGTTCGCACCCGCTGACCAAGACCGCCATGGAGCCGCCACAAC
CTTCGTGGCTAGCAGCGGTGGCGACCAACCTGGTGGCCATCCGGCGGCGC
GTTCTCGGGCCGCGCGCAGCATCACAGTTGGGCATTTTGGTGTGTTCGTC
GATCCACGTTGCCACGGTTGGGGGGAGGGGGCCCAGCCCAGCCCAGCAGT
ATACCAGTTCAGCGACAACGGTAGGGAGTGTAGCAAAGTCTTCGTATCGT
ACCTGGAGGTACTTCCCATCGTCCAGGTGCTGTTGCTTTGGCGAGTCCAG
CTGCATCCGGTAGTTTGAGCATAAACTGTGCGGTCGGGCGGTTCGTTGTT
GGAGACCGAAAAAAGGGGGGGAAGTTGACGAAGTTGAACACAGACAAGGG
GGTGGAACGAGTGACAAGTGTTTCTCGGCCAAACGTCCACCCAAACGTTC
ATGAGCAACACGTGTTCCGGGCCACTAGCTGGGAATCCTCCGCCATCCTC
TTGTGATGATATCCAGCTCATGTCGCACCCTGGCCAACGGCAAGTCGAGA
CAGACATCAATAGACGATAGCCATCCGGTTTGTTGTCGATGGCCCTCAAA
GGGTGACTATTAGAGCA

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1648:3118..10234+

>mRNA_E-siliculosus-1a_F_contig1648.3669.1 ID=mRNA_E-siliculosus-1a_F_contig1648.3669.1|Name=mRNA_E-siliculosus-1a_F_contig1648.3669.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1788bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1648:3118..10234+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAGTGCTGCCGGGCACATCATCGTGGTACCGGGGCAGATGAGTGCTGC
CGGGCACATCATCGTGGTACCGGGGCAGGAGATAACCTCTGTGCAAGGAT
ACCTCCGGGGGCATGGGACGTACGTGGAGGAGGGGACGGACGGCGGGCCT
CCCAAGCTACTGGCATGCGTGGCCGGAGTGGTCGAGAGGGTGAACAAGCT
CATCTCTGTCCGGCCAATCAAATCCAGGAGATAACCTCTGTGCAAGGATA
CCTCCGGGGGCATGGGACGTACGTGGAGGAGGGGACGGACGGCGGGCCTC
CCAAGCTACTGGCATGCGTGGCCGGAGTGGTCGAGAGGGTGAACAAGCTC
ATCTCTGTCCGGCCAATCAAATCCAGGTACATCGGCGAGGTAGGGGACCT
TGTCGTGGGAAGGGTGACGGAAGTACAATCGAAACGCTGGAGCGTGGAGG
TACATCGGCGAGGTAGGGGACCTTGTCGTGGGAAGGGTGACGGAAGTACA
ATCGAAACGCTGGAGCGTGGAGGTCGGTGCGCACAGAAGTGCGGTGTTGA
TGCTTAGCTCCGTGAACCTTCCGGGTGGGCAGCAGAGAATGAGGACCTAC
GAGGACCAGCTTCAGATGCGTTCGTTCTTCCAGGAGCACGACCTCATCAG
CGTCGGTGCGCACAGAAGTGCGGTGTTGATGCTTAGCTCCGTGAACCTTC
CGGGTGGGCAGCAGAGAATGAGGACCTACGAGGACCAGCTTCAGATGCGT
TCGTTCTTCCAGGAGCACGACCTCATCAGCGCTGAAGTCCAACAGGTCAA
CTCGGACGGAGGAATCGCTCTCCACACCAGAAGCCTCAAGTATGGCAAGG
CTGAAGTCCAACAGGTCAACTCGGACGGAGGAATCGCTCTCCACACCAGA
AGCCTCAAGTATGGCAAGCTGGAGAACGGGCAGCTAGTTTCGGTGCCCCC
CGTGCTGATCCGAAGACTGAAGCAGCACGTGGTGTCTCTGCCGGATACGG
GCGTCGACGTCATCCTGGGGACCAACGGGAACGTCTGGATTTCGACTGGA
GAACGGGCAGCTAGTTTCGGTGCCCCCCGTGCTGATCCGAAGACTGAAGC
AGCACGTGGTGTCTCTGCCGGATACGGGCGTCGACGTCATCCTGGGGACC
AACGGGAACGTCTGGATTTCGAGAACACCTCCCGAAGAGTGGAAGGGCAA
GGAGGAGGGAGACGCGGCTGGCACGGGGAGCGTGGCTCCAAAGGCTGAGA
CGCTCACACGCCAACGAAAACAGCACGCTGAGACGGAACACCTCCCGAAG
AGTGGAAGGGCAAGGAGGAGGGAGACGCGGCTGGCACGGGGAGCGTGGCT
CCAAAGGCTGAGACGCTCACACGCCAACGAAAACAGCACGCTGAGACGGA
GACGATAGGGGAGGTTAGGGCGAGTATCTGTCGGGTGAGGAACGCCATCG
TGGCCCTGAGGAGACGATAGGGGAGGTTAGGGCGAGTATCTGTCGGGTGA
GGAACGCCATCGTGGCCCTGAGGAATGTGTTTCACCTGGTGATGCCCGAG
TCCATCATGTCCGTGTACCGGAGGAGCGTCACCATGGGATTGCATCCGAA
AGACATGCTGTCAGGAGAGGCTGTGCTTGCACTCACCGCCAAGGAAGCAA
CCTAAGAATGTGTTTCACCTGGTGATGCCCGAGTCCATCATGTCCGTGTA
CCGGAGGAGCGTCACCATGGGATTGCATCCGAAAGACATGCTGTCAGGAG
AGGCTGTGCTTGCACTCACCGCCAAGGAAGCAACCTAA