Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 0 |
| Cds size | 153 |
| Model size | 153 |
| Exons | 1 |
| Ec32 ortholog | Ec-00_004380.1 |
| Ec32 ortholog description | Hypothetical protein |
| Hectar predicted targeting category | signal peptide |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936583.5302277-CDS-E-siliculosus-1a_M_contig990:2938..3091 | 1622936583.5302277-CDS-E-siliculosus-1a_M_contig990:2938..3091 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig990 2939..3091 + |
| 1696251142.7240179-CDS-E-siliculosus-1a_M_contig990:2938..3091 | 1696251142.7240179-CDS-E-siliculosus-1a_M_contig990:2938..3091 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig990 2939..3091 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig990.17796.1 >prot_E-siliculosus-1a_M_contig990.17796.1 ID=prot_E-siliculosus-1a_M_contig990.17796.1|Name=mRNA_E-siliculosus-1a_M_contig990.17796.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=51bp
VLFRFVSVSVVAFHDVVCLGVIPALCISCARKFECCREVEGDCRFQNAFI
L back to topmRNA from alignment at E-siliculosus-1a_M_contig990:2939..3091+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig990.17796.1 ID=mRNA_E-siliculosus-1a_M_contig990.17796.1|Name=mRNA_E-siliculosus-1a_M_contig990.17796.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=153bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig990:2939..3091+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GTCTTGTTTCGTTTTGTTTCGGTAAGTGTTGTCGCTTTTCATGACGTCGT
TTGTTTGGGTGTCATTCCTGCGTTGTGCATCTCTTGCGCGAGAAAATTCG
AATGTTGCAGAGAGGTCGAAGGAGATTGTAGGTTTCAAAACGCATTTATT
TTA back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig990:2939..3091+ >mRNA_E-siliculosus-1a_M_contig990.17796.1 ID=mRNA_E-siliculosus-1a_M_contig990.17796.1|Name=mRNA_E-siliculosus-1a_M_contig990.17796.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=306bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig990:2939..3091+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GTCTTGTTTCGTTTTGTTTCGGTAAGTGTTGTCGCTTTTCATGACGTCGT
TTGTTTGGGTGTCATTCCTGCGTTGTGCATCTCTTGCGCGAGAAAATTCG
AATGTTGCAGAGAGGTCGAAGGAGATTGTAGGTTTCAAAACGCATTTATT
TTAGTCTTGTTTCGTTTTGTTTCGGTAAGTGTTGTCGCTTTTCATGACGT
CGTTTGTTTGGGTGTCATTCCTGCGTTGTGCATCTCTTGCGCGAGAAAAT
TCGAATGTTGCAGAGAGGTCGAAGGAGATTGTAGGTTTCAAAACGCATTT
ATTTTA back to top
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