mRNA_E-siliculosus-1a_M_contig99.17789.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig99.17789.1
Unique NamemRNA_E-siliculosus-1a_M_contig99.17789.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17789.1 vs. uniprot
Match: D7FI64_ECTSI (Tim17 homolog, mitochondrial inner membrane protein of TIM23 complex n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI64_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 5.450e-173
Identity = 253/264 (95.83%), Postives = 253/264 (95.83%), Query Frame = 2 
Query:  209 MGDRDPCPHRIVGDVGGAFAFGLVGGGIWHSVKGFRNSPKGQGTQGALKAVMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMAQAEPPPMEAGGDAXXXXXXXGAPQAPRPLGLAPPLPPVGAPAGYRPMGDGGEVDSSATRSHDVVTGSGFETGSRFEDTLATQDPFASNTGDRYLEGGAAPRGAGDAAAAA-EGAESRSWFGRMIGRGGGK 997
            MGDRDPCPHRIVGDVGGAFAFGL GGGIWHSVKGFRNSPKGQGTQGALKAVMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMAQ EPPPMEAGGDA       GAPQAPRPLGLAPPLPPVGAPAGYRPMGDGGEVDSSATRSHDVVTGSGFETGSRFEDTLATQDPFASNTGDRYLEGGAAPRGAGDAAAAA EGAESR WFGRMIGRGGGK
Sbjct:    1 MGDRDPCPHRIVGDVGGAFAFGLAGGGIWHSVKGFRNSPKGQGTQGALKAVMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMAQVEPPPMEAGGDAGGAGGGLGAPQAPRPLGLAPPLPPVGAPAGYRPMGDGGEVDSSATRSHDVVTGSGFETGSRFEDTLATQDPFASNTGDRYLEGGAAPRGAGDAAAAAAEGAESRGWFGRMIGRGGGK 264
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17789.1 vs. uniprot
Match: A0A836CAQ4_9STRA (Tim17-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAQ4_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.560e-73
Identity = 141/268 (52.61%), Postives = 172/268 (64.18%), Query Frame = 2 
Query:  209 MGDRDPCPHRIVGDVGGAFAFGLVGGGIWHSVKGFRNSPKGQGTQ--GALKAVMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMAQAEPPPMEA----GGDAXXXXXXXGAPQAPRPLGLAPPLPPVGAPAGYRP-MGDGGEVDSSATRSHDVVTGSGFETGSRFEDTLATQDPFASNTGDRYLEGGAAPRGAGDAAAAAEGAESRSWFGRMIGRGG 991
            M +R+PCP+RI+ DVGGA+ FG VGGG++H++KG RN+PKG       ++ AV  RAPVLGGNFAVWG LF+ CDC++ A+R KED WN I SGAATGGILALRAGP+TAAKNA+VGG LLA+IEGMGI LSR  AQ +P  M A    GG A            P+   LAPP+P  GA  G  P       VD SA R  DV++GSGF+T SR+ D  A  DP+A++       GG  P   G  A A E    R +FG + GRGG
Sbjct:    1 MSEREPCPYRIIDDVGGAYVFGAVGGGVFHTIKGARNAPKGLNNSWXXSVSAVKARAPVLGGNFAVWGGLFACCDCTMAALRRKEDPWNSIASGAATGGILALRAGPKTAAKNALVGGVLLALIEGMGIGLSRMFAQMKPEDMPAILQEGGGAAPDEG------GPKQRALAPPIP-FGAHGGGAPGRRHDDAVDPSAPRQSDVMSGSGFDTDSRYADPFAQADPYATS-------GGLVPEAGGAGAGAPEAPPKRGFFGGLFGRGG 254
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17789.1 vs. uniprot
Match: A0A8J2SJP6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJP6_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.070e-58
Identity = 104/172 (60.47%), Postives = 125/172 (72.67%), Query Frame = 2 
Query:  209 MGD---RDPCPHRIVGDVGGAFAFGLVGGGIWHSVKGFRNSPKGQGTQGALKAVMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMAQAEPPPMEAGGDAXXXXXXXGAPQAPRPLGLAPPL 715
            MGD   R+PCP+RI+ D+GGA+A G VGG IWH VKG+RN+PKG  T GA + V  RAPV+GGNFAVWG LF+  DCSLVAVRHKED WN IL+GAATGG+LA RAGP+ A KNA+VGG LLA+IEG+GIL+++ MA    PPM +  D          P  P   GLAPP+
Sbjct:    1 MGDFSGREPCPYRILDDIGGAYAMGCVGGSIWHFVKGWRNAPKGSATSGAFEQVRVRAPVVGGNFAVWGGLFACFDCSLVAVRHKEDPWNSILAGAATGGVLAARAGPKAAGKNALVGGVLLALIEGLGILITKMMA----PPMASKDDLKHGGADPTLP--PTQPGLAPPV 166
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17789.1 vs. uniprot
Match: F0Y463_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y463_AURAN)

HSP 1 Score: 192 bits (487), Expect = 8.560e-58
Identity = 90/131 (68.70%), Postives = 110/131 (83.97%), Query Frame = 2 
Query:  218 RDPCPHRIVGDVGGAFAFGLVGGGIWHSVKGFRNSPKGQGTQGALKAVMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMA 610
            R+PCP+RI+ D+GGA+A G VGG IWH VKG+RN+PK QG  GA++ V  RAPV+GGNFAVWG LF+  DCSLVAVRHKED WN IL+GAATGG+LA RAGP+ A KNA+VGG LLA+IEG+GIL+++ MA
Sbjct:    1 REPCPYRILDDIGGAYAMGAVGGSIWHFVKGWRNAPKNQGFSGAIEQVKVRAPVVGGNFAVWGGLFACFDCSLVAVRHKEDPWNSILAGAATGGVLAARAGPKAAGKNALVGGVLLALIEGLGILITKMMA 131
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17789.1 vs. uniprot
Match: A0A7S1TV19_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TV19_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.280e-57
Identity = 118/238 (49.58%), Postives = 144/238 (60.50%), Query Frame = 2 
Query:  218 RDPCPHRIVGDVGGAFAFGLVGGGIWHSVKGFRNSPKGQGTQGALKAVMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMAQAEPPPMEAGGDAXXXXXXXGAPQAPR-PLGLAPPLPPVGAPAGYRPMGDGGEVDSSATRSHDVVTGSGFETGSRFEDTLATQ--DPFASNTGDRYLEGGAAPRGAG 922
            RDPCP RI+ DVGGAFA G VGG +WH VKGFRNSP+GQ   G+  A+  R+P++GGNFAVWG +F+  DC+L   R KED WN ILSGAATGG+LALRAGP  AA+NA VGG LLA+IEG G+++SRYMA A  P +EAG            P  P  P  LAPP+   G        G GG+  ++ T       GSGF T         +Q  DPFA+ +G       A P  +G
Sbjct:   10 RDPCPWRILDDVGGAFAMGAVGGTVWHGVKGFRNSPRGQALAGSANAIRIRSPIIGGNFAVWGGIFASFDCTLAWYRQKEDPWNSILSGAATGGVLALRAGPMAAARNAAVGGVLLAIIEGFGLIISRYMAPA--PAVEAG------------PLDPTSPETLAPPIQFGGQSISDMLGGFGGQSGAADTADTPAEAGSGFNTDMYTNAPRDSQFDDPFAAPSGASSXXXXAEPEASG 233
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17789.1 vs. uniprot
Match: A0A6S8D9L3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8D9L3_9STRA)

HSP 1 Score: 191 bits (484), Expect = 9.100e-57
Identity = 98/167 (58.68%), Postives = 122/167 (73.05%), Query Frame = 2 
Query:  218 RDPCPHRIVGDVGGAFAFGLVGGGIWHSVKGFRNSPKGQGTQGALKAVMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMAQAEPPPMEAGGDAXXXXXXXGAPQAPRPLGLAPPLP 718
            R+PCP+RI+ DVGGA+A G +GG IWH VKG+RNSP+G    GA+  +  RAP++GGNFAVWG LF+V DCSL AVR KED WN IL+GAATGG+LA RAGP+ AAKNAVVGG LLA+IEG+GIL+++  A    PP+ +  D            AP  +GLAPP+P
Sbjct:    8 REPCPYRIIDDVGGAYAMGAIGGSIWHFVKGWRNSPRGSALAGAVDQMQVRAPIVGGNFAVWGGLFAVFDCSLSAVRQKEDPWNSILAGAATGGVLAARAGPKAAAKNAVVGGILLALIEGLGILITKAFA----PPVPSKDDLKHGDGG-----APAQVGLAPPIP 165
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17789.1 vs. uniprot
Match: A0A1Z5KI64_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI64_FISSO)

HSP 1 Score: 190 bits (483), Expect = 5.680e-56
Identity = 92/140 (65.71%), Postives = 110/140 (78.57%), Query Frame = 2 
Query:  203 SPMGDRDPCPHRIVGDVGGAFAFGLVGGGIWHSVKGFRNSPKGQGTQGALKAVMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMAQAEP 622
            S + DR+PCP+RI+ D+GGAF  G +GGGIWHSVKG R +P G    G++ AV+ R+PVLGG FAVWG LF+ CDC+L AVR KED WN I+SGAATGGILA RAGPR AA  AVVGG LLA+IEGMGI++SR +A A P
Sbjct:    4 SGIADREPCPYRIIDDIGGAFCMGCIGGGIWHSVKGARLAPAGARMAGSMSAVIARSPVLGGQFAVWGGLFACCDCTLTAVRQKEDPWNSIISGAATGGILAARAGPRAAASAAVVGGVLLALIEGMGIMISRALAPAPP 143
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17789.1 vs. uniprot
Match: A0A7S0I5F5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I5F5_9EUKA)

HSP 1 Score: 186 bits (472), Expect = 7.480e-55
Identity = 88/138 (63.77%), Postives = 109/138 (78.99%), Query Frame = 2 
Query:  215 DRDPCPHRIVGDVGGAFAFGLVGGGIWHSVKGFRNSPKGQGTQGALKAVMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMAQAEPPP 628
            +RDPCPHRI  D+GGAFA G +GGG+W+SVKG RNSP+G+   G++ AV  RAPV+GGNFAVWG LFS  DC+LVA+R KED WN I+SGAATGG+LA R G R A+++A VGG LLA+IEG+ I L++ MA   PPP
Sbjct:    5 ERDPCPHRIFDDIGGAFAMGAIGGGVWNSVKGARNSPRGERLLGSVTAVKARAPVMGGNFAVWGGLFSSFDCTLVAIRKKEDPWNSIISGAATGGVLAARGGWRAASRSAAVGGVLLAMIEGLNIFLTKMMADTTPPP 142
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17789.1 vs. uniprot
Match: A0A7S3AY71_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AY71_9EUKA)

HSP 1 Score: 184 bits (468), Expect = 4.940e-54
Identity = 87/138 (63.04%), Postives = 107/138 (77.54%), Query Frame = 2 
Query:  215 DRDPCPHRIVGDVGGAFAFGLVGGGIWHSVKGFRNSPKGQGTQGALKAVMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMAQAEPPP 628
            +RDPCPHRI  D+GGAFA G +GGG+W+SVKG RNSP+G+   G + AV  RAP++GGNFAVWG LFS  DCSLVA+R KED WN I+SGAATGG+LA R G R A ++A VGG LLA+IEG+ I L++ MA +  PP
Sbjct:   21 ERDPCPHRIFDDIGGAFAMGAIGGGVWNSVKGARNSPRGERLIGGVTAVKARAPIIGGNFAVWGGLFSTFDCSLVAIRRKEDPWNSIISGAATGGVLAARGGWRAAGRSAAVGGVLLAMIEGLNIFLTKMMADSSAPP 158
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17789.1 vs. uniprot
Match: A0A7S4M2S1_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M2S1_9EUKA)

HSP 1 Score: 184 bits (467), Expect = 7.430e-54
Identity = 86/138 (62.32%), Postives = 107/138 (77.54%), Query Frame = 2 
Query:  215 DRDPCPHRIVGDVGGAFAFGLVGGGIWHSVKGFRNSPKGQGTQGALKAVMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMAQAEPPP 628
            +RDPCPHRI  D+GGAFA G +GGG+W+SVKG RNSP+G+   G++ AV  RAP++GGNFAVWG LFS  DCSLVA+R KED WN I+SGAATGG+LA R G R A+++A VGG LL +IEG+ I L++ MA    PP
Sbjct:   24 ERDPCPHRIFDDIGGAFAMGAIGGGVWNSVKGARNSPRGERLLGSMTAVKARAPIIGGNFAVWGGLFSTFDCSLVAIRRKEDPWNSIISGAATGGVLAARGGWRAASRSAAVGGVLLGMIEGLNIFLTKMMADTSAPP 161
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig99.17789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI64_ECTSI5.450e-17395.83Tim17 homolog, mitochondrial inner membrane protei... [more]
A0A836CAQ4_9STRA1.560e-7352.61Tim17-like protein n=1 Tax=Tribonema minus TaxID=3... [more]
A0A8J2SJP6_9STRA1.070e-5860.47Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0Y463_AURAN8.560e-5868.70Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S1TV19_9STRA1.280e-5749.58Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6S8D9L3_9STRA9.100e-5758.68Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A1Z5KI64_FISSO5.680e-5665.71Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S0I5F5_9EUKA7.480e-5563.77Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S3AY71_9EUKA4.940e-5463.04Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S4M2S1_9EUKA7.430e-5462.32Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig99contigE-siliculosus-1a_M_contig99:555356..558016 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size792
Model size1000
Exons2
Ec32 orthologEc-10_003710.1
Ec32 ortholog descriptionTim17 homolog, mitochondrial inner membrane protein of TIM23 complex
Hectar predicted targeting categoryother localisation
BRITEko00000,ko01000,ko02000,ko03029,ko03036,ko04812
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.U
EggNOG OGsCOG5596@1,KOG1652@2759
EggNOG free text desc.protein import into mitochondrial matrix
GOsGO:0000002,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005744,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009893,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010954,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0017038,GO:0019222,GO:0019866,GO:0019867,GO:0019899,GO:0022804,GO:0022857,GO:0022884,GO:0030150,GO:0030162,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031323,GO:0031325,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032270,GO:0032592,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045184,GO:0045862,GO:0046907,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051641,GO:0051649,GO:0055085,GO:0060255,GO:0065002,GO:0065007,GO:0070013,GO:0070585,GO:0070613,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072655,GO:0080090,GO:0098573,GO:0098588,GO:0098796,GO:0098798,GO:0098800,GO:0098805,GO:1903317,GO:1903319,GO:1904680,GO:1990542
KEGG TC3.A.8.1
KEGG koko:K16608,ko:K17795,ko:K19382
Preferred nameTIMM17A
Seed eggNOG ortholog2880.D7FI64
Seed ortholog evalue1e-137
Seed ortholog score496.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig99.17789.1prot_E-siliculosus-1a_M_contig99.17789.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig99 555356..557808 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936582.1765966-CDS-E-siliculosus-1a_M_contig99:555355..5559911622936582.1765966-CDS-E-siliculosus-1a_M_contig99:555355..555991Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 555356..555991 -
1696251142.060535-CDS-E-siliculosus-1a_M_contig99:555355..5559911696251142.060535-CDS-E-siliculosus-1a_M_contig99:555355..555991Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 555356..555991 -
1622936582.1947803-CDS-E-siliculosus-1a_M_contig99:557652..5578081622936582.1947803-CDS-E-siliculosus-1a_M_contig99:557652..557808Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 557653..557808 -
1696251142.0723488-CDS-E-siliculosus-1a_M_contig99:557652..5578081696251142.0723488-CDS-E-siliculosus-1a_M_contig99:557652..557808Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 557653..557808 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936582.2115703-UTR-E-siliculosus-1a_M_contig99:557808..5580161622936582.2115703-UTR-E-siliculosus-1a_M_contig99:557808..558016Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig99 557809..558016 -
1696251142.082511-UTR-E-siliculosus-1a_M_contig99:557808..5580161696251142.082511-UTR-E-siliculosus-1a_M_contig99:557808..558016Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig99 557809..558016 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig99.17789.1

>prot_E-siliculosus-1a_M_contig99.17789.1 ID=prot_E-siliculosus-1a_M_contig99.17789.1|Name=mRNA_E-siliculosus-1a_M_contig99.17789.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=264bp
MGDRDPCPHRIVGDVGGAFAFGLVGGGIWHSVKGFRNSPKGQGTQGALKA
VMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILA
LRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMAQAEPPPMEAGGDAGGV
GGGVGAPQAPRPLGLAPPLPPVGAPAGYRPMGDGGEVDSSATRSHDVVTG
SGFETGSRFEDTLATQDPFASNTGDRYLEGGAAPRGAGDAAAAAEGAESR
SWFGRMIGRGGGK*
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mRNA from alignment at E-siliculosus-1a_M_contig99:555356..558016-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig99.17789.1 ID=mRNA_E-siliculosus-1a_M_contig99.17789.1|Name=mRNA_E-siliculosus-1a_M_contig99.17789.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2661bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:555356..558016- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GCAAATTGCGTGGCACCAGCTGCTTCGCTTCCAAAGGTTCCGGACCTCGC
TACCACCAACACCGCACAAAAAAAAACGTGTCGCGTGTGATCTCCGCTTC
TTTGGCTCGCAGACGAGAGCCCCACACACAACGTCGAGTTGCCTGCCACG
GCGGGCGGTAGGGGGAGGAAGGAGCACGTTGCAGCCGTAGCCGGGCAAGC
CATCCCCCATGGGAGACAGGGATCCCTGCCCCCACCGCATCGTGGGCGAT
GTCGGGGGTGCTTTTGCTTTCGGTCTGGTGGGTGGAGGGATCTGGCACAG
CGTCAAGGGCTTCAGAAACTCTCCCAAGGGCCAGGGCACACAGGGCGCTC
TCAAGGCAGTGATGGTGAGCAACAATGAGCAGGAGAGCTCTGGCGAGAAA
AATGGTGATATGCACACACACACCCCAAAGTCTTCATTGCTCTGAATTTT
GGTCGTGAGTTTTTGTGCTCTGTGCCCACTACGCACGCTATGCGTGTTTG
AAATCTGGTGCCGCGTGGTGAGATCCCCGGTAAGTCGTGAACACGCCCTG
TGTGCCTGGTGTTTCCATGAACGCATACTGCTGCCATTGGCCCTTGCGGA
AGAACGGACGGTGTGTTGCTGTAGAGTGTGACTCCGCCCATTGCACGCCC
ACGTGCAGTTTGAAGTACTCCGTACCATAGTTTATGTAAGCTAGTATATA
GTGACGCCCACTAAATAATAAACTCCCCGTCTACCTATTTACTGCGCTGT
ATTAGGCACAGCAGCAATGTGCTTGCCCACTGAAGAGGCGGCCAAACAAA
ACGTGGTCTGTCGGTCTGAAGTAAACCCCCCGCGGCTGGCTACTTTCCGC
TGGGCTGCTATGCATAAGCTCGCGTGTCCGACGAAGTCGCGAGGCGTCTC
TCGAGTCGTGATCCCCCTTATTCAGTATCGAAAGCCTTGTGCAAATAATT
CCTCGGCGAATACTGTATCAACATTTCGCGTTGATCCTGTAGGCAGCTAC
TGTAGAACGACATCGACGCATAGGCCAGCAACAACACCTTAAATACTGTC
AATAGTCGGAGGGGGAGCGTTTATTCCTGCACAGCTACTGATACCACTGT
CACCGCCATCGATGTTGAAGCGCTGCTGTAGCGGTAGCCAGTTGTTGACG
TTCAAACGCTCTCACGCGCTTCGCCACCACTCCAACAGATAGCCGGTGAT
TGGGGTTTCACAGCAGTCACACATGGGCAGCCAGGGGTACGACCCTCATC
CCGATGCTGGTTGATCTCAACCTCCTCGTGTAGTATGTGTGTGTGCCCCG
CATGCAAGCGATTCTGTCGTACCTCTTTATACCGCGTGCGGGCCTCCGTG
TGGGAAACGCTAGCGATTGGCTACAGAGCTGAATGCTTTCCGTCTTGACG
GGCCTTACACCGCGTTTTTTTTTTTTGTGGCGAGTGCATTCGTGAGGCGG
AGTGAGTCTGTTCGAAAAGACATACGCATACTGCAGACCAAGCCTCCGCC
AGTGGACGCAAACGCCATGCGAACCCACCACTAGATAGCGAACACCTTTG
CGGCAGCGGTTGCTCGTACACGACCCGGTTCTCGAGTTCCTGGCGCGGCG
GTTCATCGCGTTTCTACCACTGCACGTGTTTTTCCCGGTCTGCGCTTGCA
GCGGAACCCCCGAAAGACTCCAGCGTTTTGTAGAGGTTTTCTACGCGCTG
TTGTGGCCGTCAGCTTGACGTGTTTGTGTGCAAGAGGCTTGGCTATTGTG
TTGTAGGCAGTCTAGACCACGCCTTGGTTTGCTCCTTGAGTGAGGGCGGT
TGAGTGTCTGGCAGACGCGTGCGCATGCGCGGCGCCCCAAGATGGCGCGC
CGCATGGCCGTGAGTGTCGCGCTCTTCCGTGGTCCTCCAACTCTCGGCCT
ACCCGCGCTTCGGTCCTACCGCCTGCACGTCGCCAACACCCTCCCCCCCT
CCCCTCTGGCCCCCCTGCCTCGCACCTTCGCGCTCGTTTGGTATCCACCT
CCTCCTCTTCCTCCTCCGACTACAGTACCGCGCGCCGGTGTTGGGGGGAA
ACTTCGCCGTCTGGGGCGCCCTCTTCTCGGTGTGCGACTGCTCCCTGGTC
GCCGTCCGCCACAAGGAGGACGCCTGGAACCCCATCTTGTCCGGCGCCGC
CACCGGCGGCATCCTAGCCCTCCGGGCGGGGCCCCGGACTGCCGCTAAGA
ACGCCGTCGTGGGCGGCGCGTTGCTGGCCGTCATCGAGGGCATGGGCATC
CTCCTGTCTAGGTATATGGCGCAGGCAGAGCCCCCGCCGATGGAGGCCGG
GGGCGACGCGGGGGGGGTTGGGGGTGGGGTGGGTGCCCCGCAGGCGCCGC
GACCACTCGGGCTGGCGCCGCCGTTGCCGCCGGTCGGGGCCCCCGCGGGT
TACCGGCCGATGGGAGACGGAGGCGAGGTGGACTCCTCGGCGACAAGATC
CCACGACGTGGTCACCGGGTCGGGCTTCGAGACCGGGTCGAGGTTCGAGG
ACACGCTGGCCACGCAAGATCCGTTCGCGTCGAACACGGGGGACCGTTAC
CTGGAGGGCGGGGCGGCGCCGCGGGGGGCGGGGGACGCGGCGGCGGCGGC
AGAAGGAGCCGAGAGTAGAAGCTGGTTTGGGAGGATGATTGGCCGAGGGG
GCGGCAAGTGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig99:555356..558016-

>mRNA_E-siliculosus-1a_M_contig99.17789.1 ID=mRNA_E-siliculosus-1a_M_contig99.17789.1|Name=mRNA_E-siliculosus-1a_M_contig99.17789.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1584bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:555356..558016- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGGAGACAGGGATCCCTGCCCCCACCGCATCGTGGGCGATGTCGGGGG
TGCTTTTGCTTTCGGTCTGGTGGGTGGAGGGATCTGGCACAGCGTCAAGG
GCTTCAGAAACTCTCCCAAGGGCCAGGGCACACAGGGCGCTCTCAAGGCA
GTGATGATGGGAGACAGGGATCCCTGCCCCCACCGCATCGTGGGCGATGT
CGGGGGTGCTTTTGCTTTCGGTCTGGTGGGTGGAGGGATCTGGCACAGCG
TCAAGGGCTTCAGAAACTCTCCCAAGGGCCAGGGCACACAGGGCGCTCTC
AAGGCAGTGATGTACCGCGCGCCGGTGTTGGGGGGAAACTTCGCCGTCTG
GGGCGCCCTCTTCTCGGTGTGCGACTGCTCCCTGGTCGCCGTCCGCCACA
AGGAGGACGCCTGGAACCCCATCTTGTCCGGCGCCGCCACCGGCGGCATC
CTAGCCCTCCGGGCGGGGCCCCGGACTGCCGCTAAGAACGCCGTCGTGGG
CGGCGCGTTGCTGGCCGTCATCGAGGGCATGGGCATCCTCCTGTCTAGGT
ATATGGCGCAGGCAGAGCCCCCGCCGATGGAGGCCGGGGGCGACGCGGGG
GGGGTTGGGGGTGGGGTGGGTGCCCCGCAGGCGCCGCGACCACTCGGGCT
GGCGCCGCCGTTGCCGCCGGTCGGGGCCCCCGCGGGTTACCGGCCGATGG
GAGACGGAGGCGAGGTGGACTCCTCGGCGACAAGATCCCACGACGTGGTC
ACCGGGTCGGGCTTCGAGACCGGGTCGAGGTTCGAGGACACGCTGGCCAC
GCAAGATCCGTTCGCGTCGAACACGGGGGACCGTTACCTGGAGGGCGGGG
CGGCGCCGCGGGGGGCGGGGGACGCGGCGGCGGCGGCAGAAGGAGCCGAG
AGTAGAAGCTGGTTTGGGAGGATGATTGGCCGAGGGGGCGGCAAGTGATA
CCGCGCGCCGGTGTTGGGGGGAAACTTCGCCGTCTGGGGCGCCCTCTTCT
CGGTGTGCGACTGCTCCCTGGTCGCCGTCCGCCACAAGGAGGACGCCTGG
AACCCCATCTTGTCCGGCGCCGCCACCGGCGGCATCCTAGCCCTCCGGGC
GGGGCCCCGGACTGCCGCTAAGAACGCCGTCGTGGGCGGCGCGTTGCTGG
CCGTCATCGAGGGCATGGGCATCCTCCTGTCTAGGTATATGGCGCAGGCA
GAGCCCCCGCCGATGGAGGCCGGGGGCGACGCGGGGGGGGTTGGGGGTGG
GGTGGGTGCCCCGCAGGCGCCGCGACCACTCGGGCTGGCGCCGCCGTTGC
CGCCGGTCGGGGCCCCCGCGGGTTACCGGCCGATGGGAGACGGAGGCGAG
GTGGACTCCTCGGCGACAAGATCCCACGACGTGGTCACCGGGTCGGGCTT
CGAGACCGGGTCGAGGTTCGAGGACACGCTGGCCACGCAAGATCCGTTCG
CGTCGAACACGGGGGACCGTTACCTGGAGGGCGGGGCGGCGCCGCGGGGG
GCGGGGGACGCGGCGGCGGCGGCAGAAGGAGCCGAGAGTAGAAGCTGGTT
TGGGAGGATGATTGGCCGAGGGGGCGGCAAGTGA
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