prot_E-siliculosus-1a_M_contig99.17782.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig99.17782.1
Unique Name	prot_E-siliculosus-1a_M_contig99.17782.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	568

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17782.1 vs. uniprot
Match: D7FI56_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI56_ECTSI)

HSP 1 Score: 775 bits (2001), Expect = 3.610e-277
Identity = 526/567 (92.77%), Postives = 533/567 (94.00%), Query Frame = 0

Query:    1 MSGMLESSSDDGCMSDHSFDFVEVEGGTSYSSDGDATVTSSLAPPKGWSTLSLSDAEAVKTVRAAVTXXXXXXXXXXXXXEFISAPIAAASFCQTAAAVTKSSTRFEPSSPAAFSCRACGNLLRDCVECPTCHSLFCREHLVVDKQNGTSPCPCEPCSPAPIATTLSAASTSSPAAAARVHHHPCDAFLPNIPVQRMADAVPSRCDGCGISLSWGELGRHACDQQLVPCGRRQHGCSWFGKRHEREAHEGSSTCPGRLALAQAEALEARSEAARLXXXXXXXXXXXXXXXXXXXXXXXXLAAAERCLQERDQEAASLRGKITTMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMPFAAILNRAGFSPQTATTTAAATAAEPVRLPLAVPDKKKSGAGSRAAATATTQTVVPGTASRASGRGTARGALSAAVQMARAGGSPPRASAGVMMDTASQAPVPAVEACLKPYLDRPSSLLEKKVVVFWPRQGRWYTGRPTVYKEATREHRVEYDDGDVRDHVLAHRSWGLIG 567
            MSGMLESSSDDGCMSDHSFDFVEVEGGTSYSSDGDATVTSSLAPPKGWSTLSLSDAEAVKT  AAVTXXXXXXXXXXXXXEFIS PIAAASFCQTAAAVTKSSTRFEPSS AAFSCRACGNLLRDCVECPTCHSLFCREHLVVDKQNGTSPCPCEPCS APIATTLSAAST       R HHHP +AFLPNIP+QR+ADAVPSRCDGCGISLSWGELGRHACDQQLVPCGRRQHGCSWFGKRHEREAHE SSTCPGRLALAQAEALEARSEAARL   XXXXXXXXXXXXXXXXXXXXXLAAAERCLQERDQEAA+LRGKITTM  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    MPFAAILNRAGFSPQTATT      A PVRLPLAVPD+KKSGAGSRAAA ATTQTVVP TASRASGRGTA+G LSAAVQMARAGGSPPRASAGVMMDTASQAPVPAVEACLKPYL+RPSSLLEKKVVVFWPRQGRWYTGRPTVYKEATREHRVEYDDGDVRDHVLAHRSWGLIG
Sbjct:    1 MSGMLESSSDDGCMSDHSFDFVEVEGGTSYSSDGDATVTSSLAPPKGWSTLSLSDAEAVKTGPAAVTXXXXXXXXXXXXXEFISTPIAAASFCQTAAAVTKSSTRFEPSSLAAFSCRACGNLLRDCVECPTCHSLFCREHLVVDKQNGTSPCPCEPCSLAPIATTLSAASTXXXXXXXRAHHHPREAFLPNIPLQRIADAVPSRCDGCGISLSWGELGRHACDQQLVPCGRRQHGCSWFGKRHEREAHEASSTCPGRLALAQAEALEARSEAARLRAAXXXXXXXXXXXXXXXXXXXXXLAAAERCLQERDQEAAALRGKITTMTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN--AMPFAAILNRAGFSPQTATTXXXXXXA-PVRLPLAVPDRKKSGAGSRAAAIATTQTVVPSTASRASGRGTAKGTLSAAVQMARAGGSPPRASAGVMMDTASQAPVPAVEACLKPYLERPSSLLEKKVVVFWPRQGRWYTGRPTVYKEATREHRVEYDDGDVRDHVLAHRSWGLIG 564

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig99.17782.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig99.17782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FI56_ECTSI	3.610e-277	92.77	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 258..313
None	No IPR available	COILS	Coil	Coil	coord: 329..359

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig99	contig	E-siliculosus-1a_M_contig99:471734..476062 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig99.17782.1	mRNA_E-siliculosus-1a_M_contig99.17782.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig99 471449..476106 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig99.17782.1 ID=prot_E-siliculosus-1a_M_contig99.17782.1|Name=mRNA_E-siliculosus-1a_M_contig99.17782.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=568bp
MSGMLESSSDDGCMSDHSFDFVEVEGGTSYSSDGDATVTSSLAPPKGWST
LSLSDAEAVKTVRAAVTTTTTTTGAAGGRREFISAPIAAASFCQTAAAVT
KSSTRFEPSSPAAFSCRACGNLLRDCVECPTCHSLFCREHLVVDKQNGTS
PCPCEPCSPAPIATTLSAASTSSPAAAARVHHHPCDAFLPNIPVQRMADA
VPSRCDGCGISLSWGELGRHACDQQLVPCGRRQHGCSWFGKRHEREAHEG
SSTCPGRLALAQAEALEARSEAARLRAAGEEAERRASSAETRASELEARL
AAAERCLQERDQEAASLRGKITTMAAAAAVTAEENAKKQERLQQQLKQQA
AAAAAAVAQDARRAGKQQQQQQAAATRTPQLPPQQQQQQPPTTMPFAAIL
NRAGFSPQTATTTAAATAAEPVRLPLAVPDKKKSGAGSRAAATATTQTVV
PGTASRASGRGTARGALSAAVQMARAGGSPPRASAGVMMDTASQAPVPAV
EACLKPYLDRPSSLLEKKVVVFWPRQGRWYTGRPTVYKEATREHRVEYDD
GDVRDHVLAHRSWGLIG*