prot_E-siliculosus-1a_M_contig99.17764.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig99.17764.1
Unique Nameprot_E-siliculosus-1a_M_contig99.17764.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length405
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A6H5JFI0_9PHAE (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFI0_9PHAE)

HSP 1 Score: 540 bits (1391), Expect = 4.490e-189
Identity = 352/446 (78.92%), Postives = 358/446 (80.27%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMFGGAGXXXXXXXXSAGPXXXXXXXXGPRXXXXXXXXXXXXX------------------------------------------RPACGNPSVRAGAVKGEEXXXXXXXXXXXXXXXTAWDGVLEEGGEWYLDGQTHRDKLAVDAACQFFLTSEGLWVDAVVLAVADSEHPPHDATAAGGSSAGSTATTRRAHFRLDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWPXXXXXXXXXXXDENTGLGGWQTVSVRMVDVAAEAEARRVKKEVXXXXXXXXXXXXXREKMLVEAMDADDAMGSYDPWGTGKYKGFEVAKDVPRGPEEEAAGAXXXXXXGPAVSFKKRKGPGNKGKFRKKARDDDE 404
            MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQ AHEKDLAMFGGAG        SAGPXXXXXXXX   XXXXXXXXXXXXX                                          RPA GNPSVRAG VK EE        XXXXXXX AWDGV EEGG+WYLDGQ HRDKLAVDAACQ+FL SEGLWVDAVVLA+ADSE PPHDATAAG +SAG  ATTRR    LDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWP       XXXXDENTGLGGWQTVSVRMVDVAAEAEARRVKKEV XXXXXXXXXXXXREKMLVEAMDADDAMGSYDPWGTGKYKGFE+A D PRGPEEEAAG XXXXXXGPAV+FKKRKGPGNKGKFRKKARDDDE
Sbjct:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQLAHEKDLAMFGGAGAGSGLGAGSAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDXXXXXXXXGSXXXRXXXXXXXXXXXXXXXXRPASGNPSVRAGDVKSEEGAAAGREGXXXXXXXAAWDGVFEEGGQWYLDGQIHRDKLAVDAACQYFLNSEGLWVDAVVLALADSEQPPHDATAAGDASAGIMATTRR----LDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWPAPREMPPXXXXDENTGLGGWQTVSVRMVDVAAEAEARRVKKEVKXXXXXXXXXXXXREKMLVEAMDADDAMGSYDPWGTGKYKGFEIANDAPRGPEEEAAGXXXXXXXGPAVAFKKRKGPGNKGKFRKKARDDDE 442          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A4D9CZ19_9STRA (U1-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ19_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.150e-30
Identity = 153/445 (34.38%), Postives = 204/445 (45.84%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMFGGAGXXXXXXXXSAGPXXXXXXXXGPRXXXXXXXXXXXXXRPACGNPSVRAGAVKG-EEXXXXXXXXXXXXXXXTAWDGVLEEGGEWYLDGQTHRDKLAVDAA------CQFFLTSEGLWVDAVVLAVADSEHPPHDATAA------------GGSSA--GSTATTRRAHFRLDLAYFEAGAEKETVLRGVEAAAVRLPAGEG--GAWPXXXXXXXXXXXDENTGLGGWQTVSVRMVDVAAE---------AEARRVKKEVXXXXXXXXXXXXXREKMLVEAMDADDAMGSYDPWGTGKYKGFEVAKDVPRGPEE---EAAGAXXXXXXGP----AVSFKKRKGPGNKG--KFRKK-ARDDD 403
            MA YW S  ++ CK+C VW+ +++ S R H+ G +H + V EFF+ +RE K +G+  + +L +++  IEKAAQ   EKD AMF          XX    XXX          XXXXXXXX    P    P    G V G  +               T      E  G + +DG T+ +  AV+        CQ ++  +  W +A+V  V  +  P    T              GG  A  G  A T+R              E + V  GV +  +RL  GE   G       XXXXXX DE+TGLGGWQTVSVRMVD  AE         AE++R K+E              R +ML EAM+ +DAM SYDP G G YKG ++ +    GP     E  GA      G      V+F++R+    KG  KFR+K AR+DD
Sbjct:    1 MADYWKSTPKHCCKFCNVWMDDNKTSRRLHEGGARHKQAVEEFFKAQREAKRQGSIGDGELSKELREIEKAAQAQAEKDAAMFK-TSVVTTVEXXXXXXXXXRPPTFSLSSRXXXXXXXXGVRHPXXXXPHRVRGDVGGWRDVEKEEKEVNGGSEDVTGGSAAAEVEGRYTVDGVTYLEGKAVETRLVRGTPCQVWVEKDDAWREAIVSRVEVTAVPNTSLTLRKFSVILGARRPDGGKEAKEGQAAVTQREE------------EAKEVEEGVLSDRIRLVEGEHSMGGVDTLPPXXXXXXVDEDTGLGGWQTVSVRMVDEEAERKASEAAVRAESKRRKEE----------DAQRRARMLAEAMEGEDAMSSYDPHGRGIYKGMDLKEGGTEGPGAIVGEVGGAALEVDLGGDQAGPVAFRRRRAGEGKGGGKFRRKRAREDD 422          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: F0WHY0_9STRA (Uncharacterized protein AlNc14C105G6187 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHY0_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.490e-12
Identity = 78/310 (25.16%), Postives = 125/310 (40.32%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMFGGAGXXXXXXXXSAGPXXXXXXXXGPRXXXXXXXXXXXXXRPACGNPSVRAGAVKGEEXXXXXXXXXXXXXXXTAWDGVLEEGGEWYLDGQTHRDKLAVDAACQFFLTSEGLWVDAVVLAVADSEHPPHDATAAGGSSAGSTATTRRAHFRLDLAYFEAGAEKETVLRGVEAAAVR--LPAG-----------EGGAWPXXXXXXXXXXXDENTGLGGWQTVSVRMV 297
            M  YW S ERYFCKYC +WL     S+R+H++ K+H++ + E  + KR+ K+K  + + DLK+Q++ IE+ A     +D  M G +         ++ P         P+              P          AV  E+                   GV     + +LDG+ H  ++   +ACQ ++     W DA+V              AA   S  +T+ + R H+++   Y +    +    + V A  +R  LPAG           + G              DE+TG+G W TV VR +
Sbjct:    1 MTEYWKSNERYFCKYCDIWLQGDSISVRHHEKSKRHLDRIQEKLKAKRQAKVKSEREDKDLKKQLDEIERTAHARFAED--MKGKSSKYANNKAFTSKPFRR------PKTKTFSDGTSSWPLYPV---------AVPEEKEPVDERKKDDL--------GVYSVRDQVFLDGKCHEGQIFAQSACQIWVEELEEWRDALV-------------DAAVRHSVPNTSLSLR-HYQIT--YMDPSQNQVITEKEVTADRLRILLPAGTTLEEAEEMIRKAGCGGASDTTESHGPVDESTGMGEWSTVLVREI 269          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A5J5BSD2_9ASTE (Matrin-type domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BSD2_9ASTE)

HSP 1 Score: 73.2 bits (178), Expect = 5.170e-11
Identity = 34/83 (40.96%), Postives = 57/83 (68.67%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMF 83
            M  YWVSQ   +C +CK+++SN+ ASIRNH+ G++H + V++     R+DK+   + E +  R +E+IE  A+R+++KD+A F
Sbjct:    1 MTEYWVSQGNKWCDFCKIFISNNPASIRNHELGQRHKDNVSKKLTTMRQDKVAKEKEEKEAARALEQIEAKAKRSYQKDVATF 83          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A397TAV1_9GLOM (Matrin-type domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TAV1_9GLOM)

HSP 1 Score: 72.4 bits (176), Expect = 6.890e-11
Identity = 32/82 (39.02%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAM 82
            M+ YWVSQ++++C+YC++++++++ S   H+QGKKH E V +F R  R    +  + E   KR++ERIE+AA + ++KD+ +
Sbjct:    1 MSEYWVSQQKHWCQYCRIYIADNKPSRTMHEQGKKHKENVEKFLRDIRRRDHENRKEEEKTKRELERIERAAMKQYKKDIIL 82          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: UPI000C1D7CA3 (zinc finger protein ZOP1 isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D7CA3)

HSP 1 Score: 71.2 bits (173), Expect = 2.470e-10
Identity = 33/83 (39.76%), Postives = 56/83 (67.47%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMF 83
            M  +WVSQ   +C +CK+++SN+ ASIRNH+ G +H + VA+     R+DK+   + + +  R +E+IE  A+R+++KDL +F
Sbjct:    1 MTEFWVSQGNKWCDFCKIYISNNPASIRNHELGTRHKDNVAKKLNTMRQDKVAKEKEQKEAARVLEQIEAKAKRSYQKDLEVF 83          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A2I0I759_PUNGR (zinc finger protein ZOP1 n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0I759_PUNGR)

HSP 1 Score: 70.1 bits (170), Expect = 5.590e-10
Identity = 33/83 (39.76%), Postives = 56/83 (67.47%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMF 83
            M  YWVSQ   +C +CK+++SN+ ASIRNH+ G++H + VA+     R+DK    + + +  R +++IE  A+R+++KD+A F
Sbjct:    1 MTEYWVSQGNKWCDFCKIFISNNPASIRNHELGQRHKDNVAKKLDDMRKDKAAKEKQQQEAARAIQQIEAKAKRSYQKDVATF 83          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A2P5FZ54_TREOI (U1 small nuclear ribonucleoprotein C n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5FZ54_TREOI)

HSP 1 Score: 68.9 bits (167), Expect = 1.310e-9
Identity = 33/80 (41.25%), Postives = 54/80 (67.50%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDL 80
            M  YWVSQ   +C +CK++LSN+ ASIRNH+ G++H + VA+     R++K    + E +  R +E+IE  A+R+++KD+
Sbjct:    1 MTEYWVSQGNKWCDFCKIYLSNNPASIRNHELGQRHKDNVAKKLADMRKEKAAKEKEEKEATRLLEQIETKAKRSYQKDM 80          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A1Y1UL55_9FUNG (Matrin-type domain-containing protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1UL55_9FUNG)

HSP 1 Score: 68.6 bits (166), Expect = 1.400e-9
Identity = 29/79 (36.71%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKD 79
            M+ YWVS ++Y+CKYCK+++++++ S +NHD G+KH EIV  + R  ++ K +  +     +R ++++EKAA + + +D
Sbjct:    1 MSEYWVSNKKYYCKYCKIYITDNKISRQNHDNGRKHKEIVQMYIRDVQKRKQEEDKEAEATRRMLQQVEKAAYKQYSQD 79          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A1Y2BXJ3_9FUNG (Matrin-type domain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2BXJ3_9FUNG)

HSP 1 Score: 68.6 bits (166), Expect = 1.530e-9
Identity = 29/79 (36.71%), Postives = 56/79 (70.89%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKD 79
            M+ YWVS ++Y+CKYCK+++++++ S +NHD G+KH EIV  + R  ++ K +  +   + K+ +++I+KAA + + +D
Sbjct:    1 MSEYWVSNKKYYCKYCKIYITDNKISRQNHDNGRKHKEIVQMYIRDVQKRKKEEEKEAEETKKILQQIDKAAYKQYSQD 79          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFI0_9PHAE4.490e-18978.92Matrin-type domain-containing protein n=2 Tax=Ecto... [more]
A0A4D9CZ19_9STRA1.150e-3034.38U1-type domain-containing protein n=2 Tax=Monodops... [more]
F0WHY0_9STRA2.490e-1225.16Uncharacterized protein AlNc14C105G6187 n=1 Tax=Al... [more]
A0A5J5BSD2_9ASTE5.170e-1140.96Matrin-type domain-containing protein n=1 Tax=Nyss... [more]
A0A397TAV1_9GLOM6.890e-1139.02Matrin-type domain-containing protein n=1 Tax=Glom... [more]
UPI000C1D7CA32.470e-1039.76zinc finger protein ZOP1 isoform X1 n=2 Tax=Olea e... [more]
A0A2I0I759_PUNGR5.590e-1039.76zinc finger protein ZOP1 n=1 Tax=Punica granatum T... [more]
A0A2P5FZ54_TREOI1.310e-941.25U1 small nuclear ribonucleoprotein C n=2 Tax=Canna... [more]
A0A1Y1UL55_9FUNG1.400e-936.71Matrin-type domain-containing protein n=1 Tax=Piro... [more]
A0A1Y2BXJ3_9FUNG1.530e-936.71Matrin-type domain-containing protein n=1 Tax=Neoc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..78
NoneNo IPR availableCOILSCoilCoilcoord: 298..332
NoneNo IPR availableGENE3D3.30.160.60coord: 9..66
e-value: 2.1E-8
score: 36.1
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 8..43
e-value: 7.9E-7
score: 38.7
IPR013085U1-C, C2H2-type zinc fingerPFAMPF06220zf-U1coord: 9..43
e-value: 3.6E-10
score: 39.4
IPR040023WW domain-binding protein 4PANTHERPTHR13173WW DOMAIN BINDING PROTEIN 4coord: 1..102
IPR000690Matrin/U1-C, C2H2-type zinc fingerPROSITEPS50171ZF_MATRINcoord: 11..42
score: 9.852
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 9..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig99contigE-siliculosus-1a_M_contig99:238205..245063 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig99.17764.1mRNA_E-siliculosus-1a_M_contig99.17764.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig99 237295..245068 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig99.17764.1 ID=prot_E-siliculosus-1a_M_contig99.17764.1|Name=mRNA_E-siliculosus-1a_M_contig99.17764.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=405bp
MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKRED
KLKGAQSESDLKRQMERIEKAAQRAHEKDLAMFGGAGAGSGSGAGSAGPP
PPPPPPGGPRGGDTPPPPPPPPPRPACGNPSVRAGAVKGEEGEEGREGSD
GGGGGGTAWDGVLEEGGEWYLDGQTHRDKLAVDAACQFFLTSEGLWVDAV
VLAVADSEHPPHDATAAGGSSAGSTATTRRAHFRLDLAYFEAGAEKETVL
RGVEAAAVRLPAGEGGAWPPPQEMPPPPPPDENTGLGGWQTVSVRMVDVA
AEAEARRVKKEVKKAKKQKREEKTEREKMLVEAMDADDAMGSYDPWGTGK
YKGFEVAKDVPRGPEEEAAGAGGGEGGGPAVSFKKRKGPGNKGKFRKKAR
DDDE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR000690Matrin/U1-C_Znf_C2H2
IPR040023WBP4
IPR013085U1-CZ_Znf_C2H2
IPR003604Matrin/U1-like-C_Znf_C2H2