mRNA_E-siliculosus-1a_M_contig99.17752.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig99.17752.1
Unique NamemRNA_E-siliculosus-1a_M_contig99.17752.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig99.17752.1 vs. uniprot
Match: D7FI23_ECTSI (DUSP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI23_ECTSI)

HSP 1 Score: 502 bits (1293), Expect = 4.500e-169
Identity = 276/293 (94.20%), Postives = 280/293 (95.56%), Query Frame = 2 
Query:  221 MGNCGAKTAVAKQQDMEDAFPSELTFRKKAELQDVLDADGIAREEGDPWLVVEAAWVQRWLAFVQGDDSARKPGPIQNETLLVHDPASKAWVPKPLLRAARREHMGHYRRVNPHVWKKWAGTYHGSGPAIWVDKEPFEDTSNWQVDPAFDGVSKGRSSRGFGGSQGGKGWEKTGSAPGQPVVAHSLAIGEMEDEGVGEETTAQAAAFFDVTLDSPRVSASGXXXXXXXXXXXXXXXXXXXXXXXXXXX--RPVRDPRSTSSSGGGDGDKLDRESTAAEMWMYGDDAATGPAQE 1093
            MGNCGAKTAVAKQQDMEDAFPSELTFRKKAELQDVLDADGIAREEGDPWLVVEAAWVQRWLAFVQGDDS +KPGPIQNETLLVHDPASKAWVPKPLLRAARREHMGHYRRVNPHVWKKWAGTY GSGPAIWVDKEPFEDTSNWQVDPAFDGVSKGRS RGFGGSQGG+GWEKTGSAPGQPVVAHSLAIG+MEDEGVGEETTAQAAAFFDVTLDSPRVSASGXXXXXXXXXXX      XXXXXXXXXX  RPVRDPRSTSS GGGDGDKL+RESTAAEMWMYGDDAATG AQE
Sbjct:    1 MGNCGAKTAVAKQQDMEDAFPSELTFRKKAELQDVLDADGIAREEGDPWLVVEAAWVQRWLAFVQGDDSVKKPGPIQNETLLVHDPASKAWVPKPLLRAARREHMGHYRRVNPHVWKKWAGTYRGSGPAIWVDKEPFEDTSNWQVDPAFDGVSKGRSGRGFGGSQGGEGWEKTGSAPGQPVVAHSLAIGDMEDEGVGEETTAQAAAFFDVTLDSPRVSASGXXXXXXXXXXXVIATSPXXXXXXXXXXXGRPVRDPRSTSS-GGGDGDKLERESTAAEMWMYGDDAATGSAQE 292
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig99.17752.1 vs. uniprot
Match: A0A7S1UJU2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJU2_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.120e-15
Identity = 53/128 (41.41%), Postives = 70/128 (54.69%), Query Frame = 2 
Query:  290 LTFRKKAELQDVLDA-DGIAREEGDPWLVVEAAWVQRWLAFVQGDDS-ARKPGPIQNETLLVHDPASKAWVPKPLLRAARREHMGHYRRVNPHVWKKWAGTYHGSGPAIWVDKEPFEDTSNWQVDPAF 667
            LT   K+  Q+ +   +  A+E GDPW +VEAAWV  WLA+V  +   + +PGPI N  LL  D   K +V +  LRA    H GH+R V P VWK +   Y  SGP I+  +  F  T NW VD  +
Sbjct:  221 LTLGGKSSAQETVKTKEEFAQELGDPWFIVEAAWVTSWLAYVHVEAGISPRPGPIYNMGLLHFDEDGK-FVARKNLRADSGNHRGHFRAVKPAVWKAYVDFYPESGPFIFC-RGDFTQTDNWYVDVGY 346
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig99.17752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FI23_ECTSI4.500e-16994.20DUSP domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S1UJU2_9STRA2.120e-1541.41Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig99contigE-siliculosus-1a_M_contig99:112150..119316 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size876
Model size2767
Exons5
Ec32 orthologEc-10_003230.1
Ec32 ortholog descriptionPeptidase C19, ubiquitin-specific peptidase, DUSP domain
Hectar predicted targeting categoryother localisation
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936571.5044153-UTR-E-siliculosus-1a_M_contig99:112149..1138201622936571.5044153-UTR-E-siliculosus-1a_M_contig99:112149..113820Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig99 112150..113820 -
1696251136.6348093-UTR-E-siliculosus-1a_M_contig99:112149..1138201696251136.6348093-UTR-E-siliculosus-1a_M_contig99:112149..113820Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig99 112150..113820 -
1622936571.5959148-UTR-E-siliculosus-1a_M_contig99:119096..1193161622936571.5959148-UTR-E-siliculosus-1a_M_contig99:119096..119316Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig99 119097..119316 -
1696251136.7188396-UTR-E-siliculosus-1a_M_contig99:119096..1193161696251136.7188396-UTR-E-siliculosus-1a_M_contig99:119096..119316Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig99 119097..119316 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936571.5220158-CDS-E-siliculosus-1a_M_contig99:113820..1141421622936571.5220158-CDS-E-siliculosus-1a_M_contig99:113820..114142Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 113821..114142 -
1696251136.6443565-CDS-E-siliculosus-1a_M_contig99:113820..1141421696251136.6443565-CDS-E-siliculosus-1a_M_contig99:113820..114142Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 113821..114142 -
1622936571.5434268-CDS-E-siliculosus-1a_M_contig99:114793..1149511622936571.5434268-CDS-E-siliculosus-1a_M_contig99:114793..114951Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 114794..114951 -
1696251136.657508-CDS-E-siliculosus-1a_M_contig99:114793..1149511696251136.657508-CDS-E-siliculosus-1a_M_contig99:114793..114951Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 114794..114951 -
1622936571.5593207-CDS-E-siliculosus-1a_M_contig99:115532..1156821622936571.5593207-CDS-E-siliculosus-1a_M_contig99:115532..115682Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 115533..115682 -
1696251136.6736624-CDS-E-siliculosus-1a_M_contig99:115532..1156821696251136.6736624-CDS-E-siliculosus-1a_M_contig99:115532..115682Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 115533..115682 -
1622936571.571363-CDS-E-siliculosus-1a_M_contig99:116063..1161771622936571.571363-CDS-E-siliculosus-1a_M_contig99:116063..116177Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 116064..116177 -
1696251136.6868012-CDS-E-siliculosus-1a_M_contig99:116063..1161771696251136.6868012-CDS-E-siliculosus-1a_M_contig99:116063..116177Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 116064..116177 -
1622936571.5840404-CDS-E-siliculosus-1a_M_contig99:118964..1190961622936571.5840404-CDS-E-siliculosus-1a_M_contig99:118964..119096Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 118965..119096 -
1696251136.7065039-CDS-E-siliculosus-1a_M_contig99:118964..1190961696251136.7065039-CDS-E-siliculosus-1a_M_contig99:118964..119096Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 118965..119096 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig99.17752.1prot_E-siliculosus-1a_M_contig99.17752.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig99 113821..119096 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig99.17752.1

>prot_E-siliculosus-1a_M_contig99.17752.1 ID=prot_E-siliculosus-1a_M_contig99.17752.1|Name=mRNA_E-siliculosus-1a_M_contig99.17752.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=292bp
MGNCGAKTAVAKQQDMEDAFPSELTFRKKAELQDVLDADGIAREEGDPWL
VVEAAWVQRWLAFVQGDDSARKPGPIQNETLLVHDPASKAWVPKPLLRAA
RREHMGHYRRVNPHVWKKWAGTYHGSGPAIWVDKEPFEDTSNWQVDPAFD
GVSKGRSSRGFGGSQGGKGWEKTGSAPGQPVVAHSLAIGEMEDEGVGEET
TAQAAAFFDVTLDSPRVSASGGAAVSGGGGVIASSPAAALAGNGGAGGRP
VRDPRSTSSSGGGDGDKLDRESTAAEMWMYGDDAATGPAQE*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig99:112150..119316-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig99.17752.1 ID=mRNA_E-siliculosus-1a_M_contig99.17752.1|Name=mRNA_E-siliculosus-1a_M_contig99.17752.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7167bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:112150..119316- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CAGGGTCATATCCACAACAGTAGCCACCGACACCCAGGCCCAAGCTTGCT
CACCCGCCAGCAACCATAGGGCCTCTCTACAACAGCAGACAGCCTGCTTC
CGTCCTCCGCTGCTGGACGATTCGGATCACGGGGCGCAGATTGCTGTGAA
TAACCCTCGTGCTCGCCCCCTTGGTTGCCCTTCTGTTCCCTGCCCCCGGC
GGAGACGGAGAGAGAAGAGGATGGGCAACTGCGGTGCAAAGACGGCAGTA
GCGAAGCAACAAGACATGGAAGATGCGTTTCCGTCCGAGCTGACGTTCAG
GAAGAAGGCAGAGCTCCAGGACGTGCTGGACGCGGACGGCATCGCCAGAG
AGGTGTGATATGTGTGTTCTCACACCATTCTTTGGCACCCTCCTGCCTGC
GACTCGGAGAGACTCGGAGTATTAACGAGGAATAAATATGTTGGAGACTC
AACCATTGTTGTTGATGGATGCTGTGTGTATTACTACATGAGGTACTACA
GCAGGCCCGCCGAGGATCCGCCTCTCTCCGCCCCCTCTTTGCTCAACGCT
GCTCCTGTCCCTGCCCCGGCGTCATGCCCCCCGCATTGATGTGCCTGCTG
CTGGGTCCCTGTTCTTACGACTTTGCCGTGGCCGGTCTGTTCGCCCTTTT
CCAAGTACACGTGTGCATGTGCGCAGAGACTGGCTCTTCAATGTGTATGC
ATGTACCGCCGTACCTATGCATATATACATAGCATTCACCAGCTGGCATG
CACGTCTGCACGTCGCGTGGTTGCACCGCACACATCGGAGAGCACACACA
CTTAACGACTACTGCTTGTACGGAACATGGCTTGCTATGTACACGTAGCT
CTCGACAGACATGCTTCTGTATTACAAATATACGGGGTCTGGCCTTCCAT
TGCTTTGAACCTTGCTGAACCTTTTTTTATGTTCAGGAAAATGACGAAAA
AAAAAAAAATCGTACTACATAAAAAAAAAAATCGTACAACATGTACATTA
AATTCATTGTAAAGACTTCAACACATCCCCTTCGACTGTGGCTTTTTCTC
GAACGGGTAGTCTTTCGGTGTTTGTACTTGTATTTTTTCTTTAAAAATGA
TGACGCTCTCGGCTCGTTGTCCGTCGAATGCATATGAACGGTTATTGTCG
TCTTTCAGTGTTTATACTAACTGCAAAGCCTCCAGCACATTCCCTTGACC
TGGGTTTTTATCTCGAACGGGTAGTCTTTCTGTGAGATCTTTACTTTCTA
CAAATATATACACAGTTCTTTCTGTGGTGATATTATGTTTACTTTGACTC
TCTATGTAGTAATAGTACAAACACAGAGAGACGACCCGTTCGAGATGTAC
CCACGCTCGAACGGGATGTGTCGGAACCTTTCAGTAAGTGGAGGAAAACC
GGCTGGGTGCTGGACTTATTTCGAGTCTGTTTTAAGGCTAGATGCACTGA
TGGTTTATATCAGTGATACCAGCTGCCTATGGGCTAATGGTTTACAGTCG
TGGTCCCGGTTTAGCGGTTCCCTGTGTAGCGGGATGCCCTGAATAGCGGT
CCCAAAACCTCGTGGAACGGCTGCACCTCGGTACTCAAACTACCATATCA
CTTCCAATCCGGTTTAGCGGCGATGCCCTCAATAGTGGTTACAACATTGT
GTGACACTATGGACCGCTCAACCAGGACCACGACTGCTGTATATCAGTGA
TACCAGCTGGTGCTGAGCAAAAAAACATCTGCATAGGTAACCTACATTTT
ACGATACATCCCCTGCAGTTCTCCACTGGGCCAACGACAAGATATCTCGG
AGAACCCCTCCGTTTTGTTGTGTGTCGTTAAATGTAACCTTCAAAGGGAA
CACGGCACAAGTGTCTCTTGACAACTTGCTACTATTTTTTATTTTTCCTA
ATACGTTATTGTACATGATGTACGTAGAGTGTAGCGGGAAAGGTTGAAGG
GACCATCCTGCTGGTGTGTTCATGACGGCCCGTTCGAAGCTGGATCTAGA
AATCAATAGCAAGAGATTGGTCCGTTGAGAGCCATGTTAACGGTTAACGG
GAAAACCGCGAACGAGTGTGGCCTTTCTCCCGTCTCCCTTTATCTACATA
CAGCAAATGCACCGCTATTTACTCTGCTGTATTGTGGAACAAAGCAGTAC
CGCTATGGCGTCACGTACGCCCCGCATACGGCGGTGCGTTTATGGTGCAT
GCTGTCCTGGCACCAACCATACGGGGAGACAGAAACAGTACATCTGTTAC
ACCCCACAGCGAATGCCTCGTCGATCCGGGCATGCATTACTTTTTTGCCT
GCTGAGGTCCCCTTTTGTTAGCCCTCTACAAGAGATGAGGAGCGTGGTCT
GGTGAGGTTTTGTGTTGTCAACCAGCCCCGACATAGATTTTTCGTGTATC
CCTCTCTTTCTAGCTGAACTTTGACCCACGGAAGTCCGTCAGCGCCAGGA
ACAAACAAACAGCAAGCAGTGTAGTCAGGTTCGAGCCAAGGGTTTGCGCA
GACAGCACTACGAGTATCGCCCCCTCGCGTGCATGCGCGTGTAGCATGTA
AGTCTTGTATGCTAGGAGAAATCAGTTTCAGGGGCAGCTTGGATTTCGTG
TTGTCAAGGATCTACAGGAGAGTGTCGCGAGACTTGATGTCACGACCAGC
ATTTTCACGACAGCGAGGCCACCTCAATGAACCGCAGGAGGCCAGGTTTG
GAAACCAGCACTCCACAAAGAACGTTACAAATACTGCTGTAGCTCAGCCT
GTGTTCTAAAGGGTCAGTGGGAAGTGAACCGGCCGGTACTACAGCTGCTG
TTCAAATTCCTTGCCCGTTGCCCACGACGACGATGGTTGTGCATTAACTA
CTGTACCCGCTGCACATGATGCCAACTTGAGCGCTTAGCCCGGCCGGCGG
GATGTATTTCTGCGGTGCTCGTGCTCAGCAGGCTTCGTCATGAAACGCAC
GCGGGGCTTGTCAAGGCCATCTCATCTCATATGGATGATAGAGAGCAAGG
CAGCACCTTTGTGCACCCCCTTGCCCTCCCTCATGACCTTGACCCCCTTC
GAGCACTCATTTAACGGCTCGTCCTATTCATCTACCTGTCCCATTCATCG
CAACCCCCGTTTTCCCTTGTGCCGCGCGCCCCCTGGCAGGAGGGAGACCC
GTGGTTGGTGGTAGAGGCGGCGTGGGTCCAGAGATGGCTGGCCTTTGTGC
AGGGGGACGACTCGGCCAGGAAGCCCGGCCCGATACAGAACGAGACGCTC
CTGGTGAGAGCGTTTGACGAGAGAAACAAAGAAAAGACGAAGGATGGAGG
GCCAAAGAGTTGAGATGGGAGACGACGAAGCGTGATATAGTCACACTCGG
CCACGCCGTGCTGTTGTGTGATGGTGTCTGTGTGTGAGTGTGTGTTTTTT
GTTTCGTTTCCGCGGATCGACCACACGTCCTGGTGGAGGGAATTCACAAT
GGCAATGGACACGAGGGCTTGACATTGGTTGTCGGGAGTACAGTAGTCCG
CCCTCTCGAGGACGCGTGGTCAATGGTCTAGCCGCTAATGCATGAAAAAC
ATAAGAGTTCGCCCCCCCCCGCATATCCACAAACGCCCGGTCCCTTGCCC
TCCCTTTTTCGTTTTGTTTTGTTTCGTGTTTCAGGTCCACGACCCGGCCT
CCAAGGCGTGGGTGCCCAAGCCCCTGCTGCGCGCCGCGCGGAGAGAGCAC
ATGGGTCACTACCGCCGGGTTAACCCGCACGTCTGGAAGAAGTGGGCGGG
GACCTACCACGGCAGCGGTCCTGCAATCTGGGTGGTGAGTTTGGAGAGAC
GCAGGGAACGGCAGGGTGTCGTCGCCGTCGTCGTCGTCGTCTTCGTCGTT
GTTGTTGTTGTTGCTGTTGTTGCTGCTGAGTTTTCGTGGTGGTGCTGCTG
ATGGTGTTTTTGCCTTTTGTGGTTGGTTGCGGTGGCGGAGTTAGTCGCAG
TGGTTGTGCGGCCACCTTCTCTGGCGTTGTTGTGGTCGTTTCTCTTGCAG
GTGTACAGGTTGTTGCTGCTGTTGCTGTTGCTGTTGCTGTTTTGTTGTTG
GTATCGTTGGCGGTGGGGTGGTGTTGACGTCGGAGTTGTTCCGTGGTGGT
GCTTGGTGTCGTTGGTGGTGATGGCGATGCCCTGCTAGAGTCGTATCGTA
GAGCCTGCGGGGTTGGTATGCTGGGTTGTATTCTTGAAGTGGGGTGGAGG
GTCGGAGATGCCACGACCCCCCCACACACACACACCCTTCCCGTCCTCCA
ACGTCTTGCGTTAAAATCGTCATATACCCTCTCGAAGTGTTTGCTGTCTT
CATAAGAACGATGCACACAGCGCGAAATCAAACACCTTGTGTGTTGAAAA
ACATAACACACGCAGGACAAGGAGCCGTTCGAAGACACGTCCAACTGGCA
GGTCGACCCTGCCTTTGACGGCGTTTCGAAGGGCCGAAGCAGTCGCGGGT
TCGGCGGTTCCCAGGGGGGGAAGGGCTGGGAGAAGACAGGGTCGGCCCCC
GGGCAGCCGGTCGTCGCTCACAGGTGTGTCCTTCTGATACGGAGTAGCAT
TAGATACCAACGATAGCGACACGCCTTCTCTTCACCAACAAGGCAGGAGC
ATGTGTGAGACAACGAATTCCGTGCTTTCGGTCACCACGTAGGTATTACG
TCCGTGTTAAGTCTATGTTGCTGCCATGATTATTGGAGGGTAGACGTGAA
GGTACGTGGTGTACTCGGTCTTTTCCTTTGGATTGGCTCGCCGCAGCAGG
TCAGCTATCATAATGGCGTCGTAATTGTTGTTGTTGGCGTTGGTGTTGTT
TGCGCGGCTGCCTTTTGTCCTCGTGTGTTTGTTGTGCGAGCATTCAACAT
TCTCCCAAGAACCGCAATTCTCAAGCAGACGGAACACGCGCCCACGATGC
GGGTTAGATGTTTGTTGTTCACCGTGTTTTTTCGTGGGACAGTACACAAG
ACAGCCGTGGGCAGTTACATGTGTTACCAGCCAGGGACAAAACACGTGTG
CTTGGACTTGTCGGTTTGTTGAAGCAGCCAACAAACCGGCTAGCACGGCA
CACGCACAACAGATATTGAGCACACACAAACGTGAACTCTGCCTTCCCCT
TATCCCTCCCCCCCCCTCCGGCCCATGATCACCCACCCCTGGGGTTGCAA
CGACAAACGTATCGCGCCGAACAGCCTGGCGATAGGAGAGATGGAGGACG
AAGGGGTCGGCGAAGAGACGACCGCGCAGGCAGCAGCCTTCTTCGACGTC
ACGCTTGACTCTCCCAGAGTGTCGGCTTCCGGGGGGGCCGCAGTATCCGG
CGGCGGCGGGGTAATCGCTTCCTCCCCCGCCGCGGCGTTAGCCGGCAACG
GAGGGGCGGGGGGGCGGCCGGTAAGGGACCCGCGCAGTACAAGCAGCAGC
GGCGGCGGCGACGGCGACAAGCTTGACAGGGAATCCACCGCCGCGGAGAT
GTGGATGTACGGCGACGACGCTGCTACGGGCCCGGCTCAGGAATGAGCGG
AAAGCGGGTTGGGGGGTTGGGGGGGCGGCGTACTCGTAGCCGTGCATGCC
GTAGTCGTTACACCATCGACCTTCGCATCCCTACAAGAACGAAGCCGGGA
CGGAGCACGCCGGGTACTCGCCCGGCTGTACAGTAGCTTCTCGGCGTTGT
GAGCACACGAAGGGTTCGAGTACGCCGCGTGTACGGGCGAAAAAACGCAC
GGGCCGGGACTCCGTTGATTTGAGGCCGACCGGGTTGGTGTGATGTGCGG
AGAGCGCTTGCTGGGTGGAAGGGGAAGAAGACAAGCCTCCCCACGCTGGT
CGTGGACGGGCGGCGCGTTACGATGGGTGCCGCGGCCGGCCGGTCTGCTC
TGCTGCGGCAAAAGGTGTCGAGTTTTTTGACCGACCGAGTCGCACGGGTT
GCTGAAGCGCTTTTTTCCATCGTTGAGCGCTCGGTTTCGGTTGTACGAGG
GAGCGGTAGGCAAGCGGAGGGAATTGAGCAATAACAGGAGAGACGTGGCC
GCTACTACTGTCAGGGTTTGTCGTCGTTTGCTCGTCGTAAGCTTTGTACC
CGATCACGCAGGGCTACCGCTTAGGAAGGGGGGCGTAAACCAATGTATTT
TTGGGTCTCGTATTTTGCTCTTGTCGTGGGCTCTTCGCGAGTCTGTGGCC
GATCATGCAAGGGCTGTAGCTTAGAGGAAGGCAAACCTTCTGATTATGTC
TCCGGTCGCTGTACGTATGGCGGGACGTTTCAGTGGCAGAAGCCCTGAAT
CATGTGTTCAATGTACTTACTATTTGTGGTATTTTATGGCTTGAGCGTAG
GTGCAACGTAAGGTCTTCGTGGGTGGGGTTCAAACCTCTGCTTTTTAGTG
GATATCCGAAAAGACTCACGCGTAAGTTAACAGTTTTTGTTTCATTTTTT
TGCCGTCTATATTGAAGCTCCACTCAGTGTTGAATTGAAGGAAGGGTTGG
TTTTGTTCTTTCCCTTACCTTTTTCATGCGTGCCGCGTTATTTTTATCTA
AGGCGTTAATGGAAATTTTTAGGTGTCAGTTTTGTCTGTTGGGTCATGAG
AAGTGTCTCTGCCACGTGTCGTCTCTTTCCCCTTCTCTCTCTCCTTGAAG
TTGTGTATCATGACGTCATGATTTTTGGTCGTGAATCGTAAAACATAGAG
GAGCAGGTTCTGCTGTTGTTTCTAGGCTGACGGGGAAATTCATACCGTCC
CCTGTTTGTTCGCTTGGTGTGCGGTTGATGCGTGGCCTTGCGGCTAGAGG
AACGGTTGTCCGCCATGCCTTTGTCCGTTTCGTACCGAAGCCAGACCAAT
CAACGCTCCCATGTCGGGGTACCCAAGATCGCGCCGGATAAGCTCACTCG
TACTAGCATAGCATGATGGATGGATACTGGGCCGACACGTACGGAGACTG
TCAGCGGTCGTCCGATCGTTTCCTTTTTTGAGCACGAATTTCTTCCGTTT
CTGCTTGGGTACGGTGGTGCACGTTGGTTGTCGAACACTCTTTTCTTTTC
TTTTTTGCAATTGCAAGTTGGGGTTCTCAGTCCAGAAACGACGAAATGTT
TTTGTGATGTGATGTGACAGAAACGTTTAAAACTTACCATAGTACTTATG
ACACAACAAATTTAGCTCCTTCACAGATAAAGAGTCTGGGATAGATTAAC
AATGAACTCATAGCACC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig99:112150..119316-

>mRNA_E-siliculosus-1a_M_contig99.17752.1 ID=mRNA_E-siliculosus-1a_M_contig99.17752.1|Name=mRNA_E-siliculosus-1a_M_contig99.17752.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1752bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:112150..119316- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGGCAACTGCGGTGCAAAGACGGCAGTAGCGAAGCAACAAGACATGGA
AGATGCGTTTCCGTCCGAGCTGACGTTCAGGAAGAAGGCAGAGCTCCAGG
ACGTGCTGGACGCGGACGGCATCGCCAGAGAGATGGGCAACTGCGGTGCA
AAGACGGCAGTAGCGAAGCAACAAGACATGGAAGATGCGTTTCCGTCCGA
GCTGACGTTCAGGAAGAAGGCAGAGCTCCAGGACGTGCTGGACGCGGACG
GCATCGCCAGAGAGGAGGGAGACCCGTGGTTGGTGGTAGAGGCGGCGTGG
GTCCAGAGATGGCTGGCCTTTGTGCAGGGGGACGACTCGGCCAGGAAGCC
CGGCCCGATACAGAACGAGACGCTCCTGGAGGGAGACCCGTGGTTGGTGG
TAGAGGCGGCGTGGGTCCAGAGATGGCTGGCCTTTGTGCAGGGGGACGAC
TCGGCCAGGAAGCCCGGCCCGATACAGAACGAGACGCTCCTGGTCCACGA
CCCGGCCTCCAAGGCGTGGGTGCCCAAGCCCCTGCTGCGCGCCGCGCGGA
GAGAGCACATGGGTCACTACCGCCGGGTTAACCCGCACGTCTGGAAGAAG
TGGGCGGGGACCTACCACGGCAGCGGTCCTGCAATCTGGGTGGTCCACGA
CCCGGCCTCCAAGGCGTGGGTGCCCAAGCCCCTGCTGCGCGCCGCGCGGA
GAGAGCACATGGGTCACTACCGCCGGGTTAACCCGCACGTCTGGAAGAAG
TGGGCGGGGACCTACCACGGCAGCGGTCCTGCAATCTGGGTGGACAAGGA
GCCGTTCGAAGACACGTCCAACTGGCAGGTCGACCCTGCCTTTGACGGCG
TTTCGAAGGGCCGAAGCAGTCGCGGGTTCGGCGGTTCCCAGGGGGGGAAG
GGCTGGGAGAAGACAGGGTCGGCCCCCGGGCAGCCGGTCGTCGCTCACAG
GACAAGGAGCCGTTCGAAGACACGTCCAACTGGCAGGTCGACCCTGCCTT
TGACGGCGTTTCGAAGGGCCGAAGCAGTCGCGGGTTCGGCGGTTCCCAGG
GGGGGAAGGGCTGGGAGAAGACAGGGTCGGCCCCCGGGCAGCCGGTCGTC
GCTCACAGCCTGGCGATAGGAGAGATGGAGGACGAAGGGGTCGGCGAAGA
GACGACCGCGCAGGCAGCAGCCTTCTTCGACGTCACGCTTGACTCTCCCA
GAGTGTCGGCTTCCGGGGGGGCCGCAGTATCCGGCGGCGGCGGGGTAATC
GCTTCCTCCCCCGCCGCGGCGTTAGCCGGCAACGGAGGGGCGGGGGGGCG
GCCGGTAAGGGACCCGCGCAGTACAAGCAGCAGCGGCGGCGGCGACGGCG
ACAAGCTTGACAGGGAATCCACCGCCGCGGAGATGTGGATGTACGGCGAC
GACGCTGCTACGGGCCCGGCTCAGGAATGACCTGGCGATAGGAGAGATGG
AGGACGAAGGGGTCGGCGAAGAGACGACCGCGCAGGCAGCAGCCTTCTTC
GACGTCACGCTTGACTCTCCCAGAGTGTCGGCTTCCGGGGGGGCCGCAGT
ATCCGGCGGCGGCGGGGTAATCGCTTCCTCCCCCGCCGCGGCGTTAGCCG
GCAACGGAGGGGCGGGGGGGCGGCCGGTAAGGGACCCGCGCAGTACAAGC
AGCAGCGGCGGCGGCGACGGCGACAAGCTTGACAGGGAATCCACCGCCGC
GGAGATGTGGATGTACGGCGACGACGCTGCTACGGGCCCGGCTCAGGAAT
GA
back to top