mRNA_E-siliculosus-1a_M_contig99.17750.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig99.17750.1
Unique NamemRNA_E-siliculosus-1a_M_contig99.17750.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: D7FI21_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI21_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 1.540e-117
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 3 
Query:  276 MSNKRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPDGGEAT 812
            MSNKRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPDGGEAT
Sbjct:    1 MSNKRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPDGGEAT 179
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A7S2GD37_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GD37_9STRA)

HSP 1 Score: 241 bits (616), Expect = 4.530e-70
Identity = 113/168 (67.26%), Postives = 136/168 (80.95%), Query Frame = 3 
Query:  267 NLAMSNKRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHA 770
            N A+  KRK++  S  EN+SPQVI RV REI  L ++PPDGIR++  E++ I+EIH ++ GP GTPY GG F +KLVLS DFP SPPRGFF TKIYHPNV+  G+ICVNTLKRDWTA+V++ H+LQVIRCLLIVPFPESSLNDEAG+LFMESYTEY  R ++W  VHA
Sbjct:    2 NSAIGIKRKLN--SGVENLSPQVIVRVSREIAALAKSPPDGIRYVAMEDEKISEIHVKMAGPDGTPYQGGIFRVKLVLSYDFPQSPPRGFFQTKIYHPNVSTKGEICVNTLKRDWTADVSIVHILQVIRCLLIVPFPESSLNDEAGKLFMESYTEYAERARLWTRVHA 167
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A8K1CMN2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMN2_PYTOL)

HSP 1 Score: 241 bits (614), Expect = 1.460e-69
Identity = 107/166 (64.46%), Postives = 134/166 (80.72%), Query Frame = 3 
Query:  315 ENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPDGGEAT 812
            EN++PQVI RV +EI+ L  NPP+GIR++PQE++ + EIH EI GP  TPYDGG F +KL LS+ FPH+PP+G FLTKI+HPN+A NG+ICVNTLK+DWT+ + + HVLQVIRCLLIVPFPESSLNDEAGRLFMESY EY RR ++W N+HA K  +   D  ++T
Sbjct:    6 ENLAPQVIQRVAKEIRQLVTNPPNGIRYVPQEDEVLTEIHVEIAGPENTPYDGGYFQVKLTLSDGFPHAPPKGVFLTKIFHPNIATNGEICVNTLKKDWTSTLGIAHVLQVIRCLLIVPFPESSLNDEAGRLFMESYDEYARRARLWTNIHAPKVSAVKKDTEKST 171
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A4D9CPA5_9STRA (UBC core domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPA5_9STRA)

HSP 1 Score: 236 bits (601), Expect = 7.480e-68
Identity = 110/165 (66.67%), Postives = 132/165 (80.00%), Query Frame = 3 
Query:  303 LSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPD 797
            +SS+EN+SPQVI+R+ REIQDL R P  GIR      D IAEIHAEI GP  TPY  G+FH+KLVLS DFP+SPPRG+FLT+IYHPNV+  GDICVNTLKRDW+  VTL HVLQVIRCLLIVPFPESSLNDEAG+ FMESY +Y RR ++  +VHA + ++ + +
Sbjct:    1 MSSYENLSPQVITRIAREIQDLVRKPSPGIRLAQNNCDNIAEIHAEIDGPEDTPYVDGTFHVKLVLSQDFPNSPPRGYFLTRIYHPNVSSAGDICVNTLKRDWSPSVTLAHVLQVIRCLLIVPFPESSLNDEAGKQFMESYADYARRARLLTSVHARRKVNGSSE 165
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A836CAV4_9STRA (Ubiquitin-conjugating enzyme E2S n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV4_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.040e-67
Identity = 106/155 (68.39%), Postives = 128/155 (82.58%), Query Frame = 3 
Query:  315 ENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKS 779
            EN SPQ ISR+ RE+ +L R  P+G  F+P E D IAEI  +I+GPVGTPY+GGSF +KLVLS+D+P SPPRGFFLT+IYHPNV P GDICVNTLK+DWT  VT+ H+ QVIRCLLIVPFPESSLNDEAG+LFMESY E+ RR ++  +VHA+K+
Sbjct:    7 ENFSPQTISRLHREVGELARASPEGCTFVPSETDNIAEIMCDIEGPVGTPYEGGSFRVKLVLSSDYPSSPPRGFFLTRIYHPNVGPTGDICVNTLKKDWTQAVTMAHIFQVIRCLLIVPFPESSLNDEAGKLFMESYEEFSRRARLMTSVHAAKN 161
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A067BZY2_SAPPC (UBC core domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZY2_SAPPC)

HSP 1 Score: 233 bits (594), Expect = 1.590e-67
Identity = 105/167 (62.87%), Postives = 135/167 (80.84%), Query Frame = 3 
Query:  303 LSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPDGG 803
            +++ EN SPQ++ RV +E++ L  NPPDGIR L  E+D++AEIH E++GP  TPY GG F +KL+L++ FP +PP+G FLTKI+HPN+APNGDICVNTLKRDW+A++ L+HVLQVIRCLLIVPFPESSLNDEAG+LFME Y EY RR K+  ++HA+KS     D G
Sbjct:    1 MAAHENFSPQILQRVAKEVRQLATNPPDGIRLL--EQDSLAEIHVELRGPEETPYVGGFFEVKLLLTDGFPTTPPKGVFLTKIFHPNIAPNGDICVNTLKRDWSADLDLSHVLQVIRCLLIVPFPESSLNDEAGKLFMECYDEYARRAKILTDIHATKSKFKTTDAG 165
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: K3WZA4_GLOUD (UBC core domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZA4_GLOUD)

HSP 1 Score: 235 bits (600), Expect = 2.380e-67
Identity = 109/166 (65.66%), Postives = 133/166 (80.12%), Query Frame = 3 
Query:  315 ENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASK-SLSSAPDGGEA 809
            EN+ PQVI RV REI+ L   P DGIR+LPQ+++ + EI AEI+GP  TPY+GG F IKLVLS+ FP +PPRG FLTKI+HPN+A NGD+CVNTLK+DW+ ++ + HVLQVIRCLLIVPFPESSLNDEAGRLFMESY EY RR ++W N+HA K S S  P+  +A
Sbjct:    5 ENLPPQVIQRVAREIRQLVVTPLDGIRYLPQDDEQLTEIRAEIQGPENTPYEGGFFRIKLVLSDGFPQTPPRGVFLTKIFHPNIATNGDVCVNTLKKDWSPQLGIAHVLQVIRCLLIVPFPESSLNDEAGRLFMESYEEYARRARIWTNIHAPKESASPKPEEDDA 170
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A425CV13_9STRA (UBC core domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425CV13_9STRA)

HSP 1 Score: 232 bits (591), Expect = 7.400e-67
Identity = 105/171 (61.40%), Postives = 135/171 (78.95%), Query Frame = 3 
Query:  285 KRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPD 797
            K+   ++S+ EN SPQ+I RV +EI+ L  NPP GIR+LPQ+++++AEIH E+ GP  TPY GG F +KL+L+  FP  PP+G FLTKI+HPNVA NGDICVNTLKRDW+A++ L+HVLQVIRCLLIVPFPESSLNDEAG+LFME Y EY +R ++  ++HASK+     D
Sbjct:    2 KKAACMMSAHENFSPQIIQRVAKEIRQLATNPPSGIRYLPQDDESLAEIHVELVGPEDTPYAGGFFEMKLLLTEGFPTVPPKGHFLTKIFHPNVASNGDICVNTLKRDWSADLDLSHVLQVIRCLLIVPFPESSLNDEAGKLFMECYDEYAQRARILTSIHASKTKCKDAD 172
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A7S2W6M0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6M0_9STRA)

HSP 1 Score: 231 bits (590), Expect = 2.100e-66
Identity = 111/177 (62.71%), Postives = 138/177 (77.97%), Query Frame = 3 
Query:  276 MSNKRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPDGGE 806
            + +KR +S     EN+ PQVI+R+ +EI     NPP GIR++P E+D I+EIHA I+GP  TPY  G+FHIKLVL +D+P +PPRGFFLTKIYHPNV+  G+ICVNTLKRDW+A+V+L+HVLQVIRCLLIVPFPESSLNDEAG+LFMESY EY RR K+   +HA+   S+   G E
Sbjct:    4 VGSKRSLSQ----ENLPPQVIARLTKEIAAFASNPPAGIRYVPPEDDKISEIHATIQGPEETPYASGTFHIKLVLGHDYPQAPPRGFFLTKIYHPNVSAKGEICVNTLKRDWSADVSLSHVLQVIRCLLIVPFPESSLNDEAGKLFMESYEEYCRRAKLLTRLHATAHPSNTGGGAE 176
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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A7S2W2W0_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W2W0_9STRA)

HSP 1 Score: 230 bits (586), Expect = 4.180e-66
Identity = 107/169 (63.31%), Postives = 137/169 (81.07%), Query Frame = 3 
Query:  285 KRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSA 791
            KRKMS  SS EN+SPQV+  + RE++ L   P +GI  L  EED + +I A+I+GPVGTPY+GG+F  KLVLSNDFP+SPPRGFFLTKI+HPNVAPNGDICVNTLKRDW A++ ++H+ QVIRCLLI+PFPES+LN++A +LF+ESY EY +R K+  ++HA+K  S A
Sbjct:    3 KRKMS--SSHENLSPQVLQSIARELRKLAVKPLEGIHILINEED-LTDIQADIEGPVGTPYEGGAFRCKLVLSNDFPNSPPRGFFLTKIFHPNVAPNGDICVNTLKRDWKADLGMSHIFQVIRCLLIIPFPESALNEDASKLFLESYNEYAKRAKLMTSIHAAKKCSDA 168
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI21_ECTSI1.540e-117100.00UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S2GD37_9STRA4.530e-7067.26Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8K1CMN2_PYTOL1.460e-6964.46Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9CPA5_9STRA7.480e-6866.67UBC core domain-containing protein n=2 Tax=Monodop... [more]
A0A836CAV4_9STRA1.040e-6768.39Ubiquitin-conjugating enzyme E2S n=1 Tax=Tribonema... [more]
A0A067BZY2_SAPPC1.590e-6762.87UBC core domain-containing protein n=2 Tax=Saprole... [more]
K3WZA4_GLOUD2.380e-6765.66UBC core domain-containing protein n=1 Tax=Globisp... [more]
A0A425CV13_9STRA7.400e-6761.40UBC core domain-containing protein n=5 Tax=Aphanom... [more]
A0A7S2W6M0_9STRA2.100e-6662.71Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2W2W0_9STRA4.180e-6663.31Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig99contigE-siliculosus-1a_M_contig99:93654..99558 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size876
Model size2723
Exons4
Ec32 orthologEc-10_003200.1
Ec32 ortholog descriptionUbiquitin-conjugating enzyme E2
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000,ko04121
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.O
EC2.3.2.23
EggNOG OGsCOG5078@1,KOG0423@2759
EggNOG free text desc.protein modification by small protein conjugation
GOsGO:0000151,GO:0000152,GO:0000209,GO:0000278,GO:0000280,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005680,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0007049,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009893,GO:0009987,GO:0010458,GO:0010498,GO:0010604,GO:0010992,GO:0010994,GO:0016043,GO:0016567,GO:0016740,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019899,GO:0019941,GO:0022402,GO:0022607,GO:0030163,GO:0031145,GO:0031323,GO:0031325,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031461,GO:0031625,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032446,GO:0032991,GO:0034622,GO:0035519,GO:0036211,GO:0042592,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044314,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0048285,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051258,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051603,GO:0060255,GO:0061630,GO:0061631,GO:0061650,GO:0061659,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070534,GO:0070647,GO:0070979,GO:0071704,GO:0071840,GO:0080090,GO:0085020,GO:0140014,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1903047,GO:1903320,GO:1903322,GO:1904666,GO:1904668,GO:1990234
KEGG Pathwayko03013,ko04120,ko04744,map03013,map04120,map04744
KEGG koko:K10583,ko:K13764,ko:K14292
Preferred nameUBE2S
Seed eggNOG ortholog2880.D7FI21
Seed ortholog evalue1.2e-99
Seed ortholog score369.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig99.17750.1prot_E-siliculosus-1a_M_contig99.17750.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig99 93929..97986 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936571.0334046-UTR-E-siliculosus-1a_M_contig99:93653..939281622936571.0334046-UTR-E-siliculosus-1a_M_contig99:93653..93928Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig99 93654..93928 +
1696251136.4424477-UTR-E-siliculosus-1a_M_contig99:93653..939281696251136.4424477-UTR-E-siliculosus-1a_M_contig99:93653..93928Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig99 93654..93928 +
1622936571.112048-UTR-E-siliculosus-1a_M_contig99:97986..995581622936571.112048-UTR-E-siliculosus-1a_M_contig99:97986..99558Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig99 97987..99558 +
1696251136.506809-UTR-E-siliculosus-1a_M_contig99:97986..995581696251136.506809-UTR-E-siliculosus-1a_M_contig99:97986..99558Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig99 97987..99558 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936571.0490026-CDS-E-siliculosus-1a_M_contig99:93928..940291622936571.0490026-CDS-E-siliculosus-1a_M_contig99:93928..94029Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 93929..94029 +
1696251136.453822-CDS-E-siliculosus-1a_M_contig99:93928..940291696251136.453822-CDS-E-siliculosus-1a_M_contig99:93928..94029Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 93929..94029 +
1622936571.0656135-CDS-E-siliculosus-1a_M_contig99:94453..945301622936571.0656135-CDS-E-siliculosus-1a_M_contig99:94453..94530Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 94454..94530 +
1696251136.4627583-CDS-E-siliculosus-1a_M_contig99:94453..945301696251136.4627583-CDS-E-siliculosus-1a_M_contig99:94453..94530Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 94454..94530 +
1622936571.0820115-CDS-E-siliculosus-1a_M_contig99:96607..967981622936571.0820115-CDS-E-siliculosus-1a_M_contig99:96607..96798Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 96608..96798 +
1696251136.4796865-CDS-E-siliculosus-1a_M_contig99:96607..967981696251136.4796865-CDS-E-siliculosus-1a_M_contig99:96607..96798Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 96608..96798 +
1622936571.0958216-CDS-E-siliculosus-1a_M_contig99:97479..979861622936571.0958216-CDS-E-siliculosus-1a_M_contig99:97479..97986Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 97480..97986 +
1696251136.4903588-CDS-E-siliculosus-1a_M_contig99:97479..979861696251136.4903588-CDS-E-siliculosus-1a_M_contig99:97479..97986Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 97480..97986 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig99.17750.1

>prot_E-siliculosus-1a_M_contig99.17750.1 ID=prot_E-siliculosus-1a_M_contig99.17750.1|Name=mRNA_E-siliculosus-1a_M_contig99.17750.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=292bp
MSNKRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIA
EIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPN
GDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESY
TEYERRVKVWVNVHASKSLSSAPDGGEATSGGGSSGSGAAIKGGVVKAGG
NGDSGAAVAAAAAAPAAAPAAVSGKKAAPSGKKGSSSAKVAGGGGAAGGV
AGGKRREDAGAAAAAAGAAAAPRKTVKDRQKEAKKKGLKRL*
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mRNA from alignment at E-siliculosus-1a_M_contig99:93654..99558+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig99.17750.1 ID=mRNA_E-siliculosus-1a_M_contig99.17750.1|Name=mRNA_E-siliculosus-1a_M_contig99.17750.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5905bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:93654..99558+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTGACTTCTCTCTGTGCGGCACACCGTGGCACGACGAACTCGTCTTTCGC
GCGCGTTTGACCCAACGCCCCTCGAGGAACAGCAGACAGGACGTCCGGCT
CTGTATCATCAGCACGCCCGGACCCAGCGTACTTTCCGTGGTCGCTGGAG
ACAGGAGAGAGAAGGGGGTGTCTCTCGGACCACCCTACGGCAAAGCGTGT
GTGTACGCCAGTTTTGCCACACTTTTCTCTCACGCAGTGGGGGGGGGGCT
TCTTCACTTTGCGGGTAACCTGGCCATGAGCAACAAGAGAAAAATGTCTC
TGCTTTCGTCGTTCGAGAACATCTCACCCCAGGTCATCAGCCGGGTGGGA
CGAGAGATTCAAGACCTGCAGCGAAAGTGAGTCTCTCTCACAAAACTCGG
CGAGATTTTCTCGATTCCCCACACCCCCCATCTCTCTTGCTCGCGCGAAA
AAACCGGACGCACACGGCCTGCTGTACTGCTGTACCTCGAGGAACGGCTT
CGGGCATCAAACCCTCTATCGGCTCTTGAAACAGCGGGCCTAGTGAGGCG
TGTTTGACTTCTTTGGGCAATCGGCGTGAGGAACCACAGTGGTATTTACT
GATTTTGCCCGTGTAGATGGTTTCAACGGGTTGTTGTCGCCGCGCTACAA
TCAGGCGGCGATTTACGTGTGCAGAGATGAAACCCAACCGCCGATTGTTG
CAGCCCCTCTTTCCAATCTCTCATCAACAACAACGCTTGTCCCCCTTTTT
TTCCCGCCACTGCGCTCCCCCCCTGTCCACGCGCCGCGATGGGACAACAG
CCCTCCAGACGGTATCCGCTTCTTGCCCCAGGAAGAGGACACGATCGCTG
AAATCCACGCGGAAATCAAGGGTCCAGGCAAGTAAAATATGTGTTGTGTT
TTTATCTCCGCTCTCCACCTCGCTGCAGAAGAGGTCGCTTTTTCGCTTTT
GCCGAGGGGCTGGATCGGGAAACACCACATGATGAGAGACACCAGAGATA
TGCACAGCAGTAGGGGAGGCCTTTTCCTACCGGGAACAATAATGTGATCA
GCCACGTCTCACAACCGTTCCGGGCAACAAGCGTGTGCCTGGGGGTCAGC
TCGTGCGTAATACTTCGTTGATGCGCGGACGAGTGTTCGGGTATCCCGCC
CGCCGCCGACAAGTGAGGGTACATAAAATACTATGACGATCCCTCCCTCG
GTTTCGGAAAAGGGTCCCACCAGCGAGCTGCCTCTGCTGTTGCTGCTGCT
GCTGAGTGCCACCCTTTTGAGTCCGCTTGCTCTGAGCCAGATTTTGTGAG
CACCGTAGACGTAGGCGTGCTGTTTCCTGTAGTTTGACCACAGCCTCGAG
AGGTACGTGTGCATGAACGTAACAGGCGCGGCGGTACTACAAAAGAGTAA
ACCGCGATAGAAAATTCTTTCTCGAACACCTTTCTCCGCCTTCCTCCACT
CGCACGAGATCAACGAGACGCGACGGCTAATATTGTCATAGTTGGCGACC
GCCGTGCGAGTTTGAGCGTTTGCTTTTTCTTTGTTTGGGAGGGGAGGATG
GGGGACAAGGCACTCCGAGACACAGCAAGGGAACGAAAACAACTCAGCAT
TTCTCATATCTTGGATACTATACAAATAGATCTAGCGAGAAACACGCACT
TCCCACAAACGACGGTGTGCCACTGAACCGAATGCAGAGATTGATGCTCC
TGAGAAGCACCTAGTGGTATGGAGGCTTGTTTGCGCAACACAAGTGAGGA
ATGGCGACACGTGTGCCCCTTCTCGCGCGAACCACGCGTAACGCAGAGAA
ACTTGTCTTGTGGAGTGGAAATAATTTTGTTCCGATCGAGGCCTCGCCCT
GTTGTCGTATGTACACTGTAACAGAACTTGCGTACCCGGAGGTAAGAATG
TCGTATGCACATGGACACGACGGTAACGACATGAAGACCCTTACAGGTGT
AGGACGAAAAAGGACAAAAGGACACAAGGGGCGGGGGGGGCGGGGGGCTC
TTGCTGCACACTAGTGTCGTTTCCCGGCAGGCACTTGGCGCTGCCGTTGT
GGGACGCATTTGTGGGCTCTTGTGCCTTTCACCCCCACTTTAGTACCGGT
GGGAGAAGTGTATTTATCCTTGTCTGCCCCGAAATGACCAGCAGGTGAGA
CACATTATTTTTGTGTGGATACATCCCAGTTAAGGTTTCCATTTGCATTC
CAACAACGATGGCGTTGGTGGTGAGTGTGACCGTATTGCCAAAAGCCGTA
TACTCCTTGCAACAAGATAAAATCTGAAAAATCTGAATTTAGTAGATGAA
TTTCGCCCGGAAGGTGGAATGGTGCGGAGCACAAGGACTTTGGCTTGGGC
ACGAAACCAACATCAGCTCTAGTACAGGTAGATGCTTCGAGTGCTTCTCT
TGTCTGGGCATGCGTTGAGCCCCGACATCTGTACGCCCACGCGTGCGATG
CGGGCATGTCTTGCTGCTGCTGCTCTTGCTGCTGCTATTGCCATTGCCAA
CTCTACCCTCGTTTTTCTCGACAGGATGTCGCACCTGCCGCTCTGTGTGC
CGATGTACGCGTGTACTGCTGTAAGAACATACCTCTTCGCCCCACTTCCA
CCCTGCCTCGTTCCTCAACATGGTCGTCAACATGCTCGTGCCTCGTGCGT
AGGCGAAGCTCCAGATCCTCGGCTAAGCAATGTTTGCTACAGCAGTGTTG
CGTTATGCATGTTTTAAAAGTTCTTGGTACGCCGTCCAGAAACCGCACTC
TTCTTTGGCACAAGGAGGCGTTTTTTCCCGATCCCTCCTTATCGGCGCGC
AAGCTTGTGCGCCGCTCCGCTACCTACGTGCAGCCTTTGAACAGACGGTT
GTTGCGTGTCTCCCCCCCCCCCCTTCTGGTTTCCTTACTTTCGCCTCGCC
CGTGCGCTTGCGTTCCGCCCCGTGTGATAAACCCTCATTCCACGACGGAC
GCAGTCGGGACTCCCTACGATGGTGGGTCCTTCCACATCAAGCTCGTCCT
GAGCAACGATTTCCCGCACTCGCCGCCCAGAGGTTTCTTCCTCACCAAGA
TCTACCACCCCAACGTTGCTCCGAACGGTGACATCTGCGTCAACACGCTC
AAGAGAGATTGGACGGCGGAGGTTACTCTGACCCACGTCTTGCAGGTAGG
CGGTGGCGGGGGCACAGCAGCAGCAGGAGCAGGGCGGGGGGGGGGGGGGG
GTACGTAGTACACGACGGGGAAACAAAGCCGTGCACGCGGCCCTTTGCCG
TCCGGGGTATGAAGGATGGTACGTAGGTAACTCATGTAGTTGCGAGGTTT
CGCTCCTTTTTTCTTTTCTTTTTATTGCAGCAAGGCGTGGTCTTGCTGGC
AGTGGTCTTGGATTGCCGTTGGGAGTTGAATGTCTCGCAACGTCTATTCT
AGCGCTTTCGAGCCGGCCGTGGAACCGTACCTGCTGTTTTCGACGATCGA
TGCCCTGGAAGCCGAGACATGGGATATGCTGGCTGGGAGGGTTGCGCTGG
CCTCACACATCACGTCTGGAATTGTTTCAGGGTCCGTTGCCGGTCGGTCA
CTTGCGGCACGTTTCGTTGCGGTATCCTACATGCCCCGAAGTGATGCCTC
CTCGCAGTCAATAAAGGTGTTCCATGTTTGCTCACCACCCTTGATTCCAT
CCCTTCCGTCGTCCATGCATGATGAATGTTTACATCTGCAGCCTGTCCGA
TGCTCCTGAAAATGATGGTGCCGCATCGAGGAGGTTTTTATTGTGTGTCT
TTGCTTACCCCCTGCTGTCGGCTGACTCCCCTCTTGCCTCCTTCTCTATT
TTTTTTTTTTCTTACGTTGGCCCCAGGTAATTCGATGTTTGCTGATCGTC
CCCTTCCCGGAGTCGAGCCTGAACGACGAAGCCGGACGGCTGTTCATGGA
GAGCTACACCGAGTACGAGCGGCGCGTTAAGGTCTGGGTGAACGTCCACG
CGTCCAAGTCTCTGTCGTCGGCCCCGGACGGGGGGGAGGCAACCAGCGGC
GGCGGTAGCAGCGGCAGCGGGGCGGCTATCAAAGGAGGCGTCGTGAAGGC
GGGGGGGAACGGGGATTCAGGAGCGGCGGTGGCAGCAGCGGCGGCGGCAC
CGGCGGCGGCACCGGCGGCGGTCAGTGGGAAGAAGGCGGCCCCATCGGGC
AAGAAGGGATCCTCATCTGCCAAAGTGGCTGGAGGCGGCGGCGCTGCCGG
CGGGGTGGCCGGTGGCAAGCGAAGGGAGGACGCGGGGGCGGCGGCGGCGG
CGGCAGGAGCGGCGGCGGCCCCGAGGAAGACCGTCAAGGACCGTCAAAAG
GAGGCCAAGAAGAAGGGGCTCAAGCGCTTGTAGTGAAGGCGGGGCGTGCC
TGCTGCTCGCTTCTGGCGATGAAGTTTGTTGCTGCTGGTACTGGCCTATA
GACAACCGGGAGCTGCTGATGGTCGTTGTTGATTGTGGGGCTGGTCGATG
CTCCAAAAAGGACGCTTGCTTCAGTGCGCGTTGTCCCTCGAGGAGCGCCG
CTGCGGTGGGGTACGGCTACAGCAGCGGCGCTTGAGTTTACGCCCGCCGT
GTCGAGCCGTGGACAGCCGGCGGGCTGCACCGCCGGTGGCTCGTGTTTGT
CGACGCGGGCTCGGGTGCGTACATGACGTCGTTTTTTCTTGCTTGTGTGT
GTGTGTGTTGCAAAGGAGGAGACGGATCGAGACGTGGCCCATTCCACGTT
TCTTATGCGGGTTTGCATTGGTCAGGTTTGGTCCTTGTTTACAGCAGTGC
CGGCTGGCCTGCGAGGGAGAGAAGCGGACGACATCTACCTGTGAGATCAA
GAATGAGCCCAGATGAGCATTTCTTCCAGCTCCGCACCGCTCTCGATCTC
GGGCTCTAAGTTCGCGTGTATTTTTCACTTTCACGTACGCAGACGGCCTT
TTTAAGTCTTTCGCGGAAGGTGGGTAACTTGATACGAGTATATAAGAATA
AAACCTCTTAGCTCTTGTGGCGTGGCACCATGGCGGTACTATAGGGTATG
TATGGTCGGTATTTTTTTGTGCGTCGGGCCGTGGTTGGGTTGGGTTGGGT
TGGGTTGGGTTCTCGTTTTCCGTGCCTGTTTGGCGTAATAATTATAAGGG
ACCTCGTCGTGGCAGCTTTTTTCTCTGAATGAAGGTGGCGGGTGGCAGGT
TGAACTGCCTATAGCGTGTAGGTGAGGGTTGGTAAGAGAGACGCGACTCA
ATTCTTAGCCTCTGTCGAGCAGGCGTGCTCTCTCTCGCGTGGCTTCTCTG
CCGTTGTAGGGTGTTTTTGTTGTGCTCGAATGGTTCTTTTGTCCGTGTGC
TCATCAGAACCTCGAGAGTGGAGGGGGGGGTCCGCGGACTGGCTAGGTTG
GCGGAGCGCCTGTAGGACGAAGCAGCTATCGAAGTCACTCTCGTGTGAGA
CCCTTTTCCATAGGTGGAGAGGGCTGGTGCTGTGTCGAAAGGTTTGAAGC
TCTGGTAGGAAGAAATATATTGTTACTCAAAGCATATTGTTACTCAAAAC
AAGGTGGATGGGGAGGATACCCCCCTCCTTTTCGCGCTTGTGTGTTTCGG
GTAAATGGTTTCGGGGGTCGATCGCGCTTGCTTGTCGGGATATTTATCTG
TTCGTTCTCTTGTCGTTGTGGTCGTCATTTCTTTGGCCTTCTGTTTACCC
GCCGAAAAAAACGCGGACACGCAGCGATGGCAGAAGCCCTCGGCTTGGCT
TCTTCCGCGGGGAGAAGTGACAGGCGAGCGTCTCCTACAAGCAGAAGCCT
ACAGGAGGTTGATGAGCGAAGTCAGGGACACGCAGCACGTGTTTGCGTTT
GCGTGTGCGTGTATTACTATCTTCTCTCGTTTGCCTGGAAAGCAAGTCCG
CGGTTTGCTATTGGTTAGGAGTACACGAGGGACATCGATTTTTTTTTGCA
TTTCT
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig99:93654..99558+

>mRNA_E-siliculosus-1a_M_contig99.17750.1 ID=mRNA_E-siliculosus-1a_M_contig99.17750.1|Name=mRNA_E-siliculosus-1a_M_contig99.17750.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1752bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:93654..99558+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGAGCAACAAGAGAAAAATGTCTCTGCTTTCGTCGTTCGAGAACATCTC
ACCCCAGGTCATCAGCCGGGTGGGACGAGAGATTCAAGACCTGCAGCGAA
AATGAGCAACAAGAGAAAAATGTCTCTGCTTTCGTCGTTCGAGAACATCT
CACCCCAGGTCATCAGCCGGGTGGGACGAGAGATTCAAGACCTGCAGCGA
AACCCTCCAGACGGTATCCGCTTCTTGCCCCAGGAAGAGGACACGATCGC
TGAAATCCACGCGGAAATCAAGGGTCCAGCCCTCCAGACGGTATCCGCTT
CTTGCCCCAGGAAGAGGACACGATCGCTGAAATCCACGCGGAAATCAAGG
GTCCAGTCGGGACTCCCTACGATGGTGGGTCCTTCCACATCAAGCTCGTC
CTGAGCAACGATTTCCCGCACTCGCCGCCCAGAGGTTTCTTCCTCACCAA
GATCTACCACCCCAACGTTGCTCCGAACGGTGACATCTGCGTCAACACGC
TCAAGAGAGATTGGACGGCGGAGGTTACTCTGACCCACGTCTTGCAGTCG
GGACTCCCTACGATGGTGGGTCCTTCCACATCAAGCTCGTCCTGAGCAAC
GATTTCCCGCACTCGCCGCCCAGAGGTTTCTTCCTCACCAAGATCTACCA
CCCCAACGTTGCTCCGAACGGTGACATCTGCGTCAACACGCTCAAGAGAG
ATTGGACGGCGGAGGTTACTCTGACCCACGTCTTGCAGGTAATTCGATGT
TTGCTGATCGTCCCCTTCCCGGAGTCGAGCCTGAACGACGAAGCCGGACG
GCTGTTCATGGAGAGCTACACCGAGTACGAGCGGCGCGTTAAGGTCTGGG
TGAACGTCCACGCGTCCAAGTCTCTGTCGTCGGCCCCGGACGGGGGGGAG
GCAACCAGCGGCGGCGGTAGCAGCGGCAGCGGGGCGGCTATCAAAGGAGG
CGTCGTGAAGGCGGGGGGGAACGGGGATTCAGGAGCGGCGGTGGCAGCAG
CGGCGGCGGCACCGGCGGCGGCACCGGCGGCGGTCAGTGGGAAGAAGGCG
GCCCCATCGGGCAAGAAGGGATCCTCATCTGCCAAAGTGGCTGGAGGCGG
CGGCGCTGCCGGCGGGGTGGCCGGTGGCAAGCGAAGGGAGGACGCGGGGG
CGGCGGCGGCGGCGGCAGGAGCGGCGGCGGCCCCGAGGAAGACCGTCAAG
GACCGTCAAAAGGAGGCCAAGAAGAAGGGGCTCAAGCGCTTGTAGGTAAT
TCGATGTTTGCTGATCGTCCCCTTCCCGGAGTCGAGCCTGAACGACGAAG
CCGGACGGCTGTTCATGGAGAGCTACACCGAGTACGAGCGGCGCGTTAAG
GTCTGGGTGAACGTCCACGCGTCCAAGTCTCTGTCGTCGGCCCCGGACGG
GGGGGAGGCAACCAGCGGCGGCGGTAGCAGCGGCAGCGGGGCGGCTATCA
AAGGAGGCGTCGTGAAGGCGGGGGGGAACGGGGATTCAGGAGCGGCGGTG
GCAGCAGCGGCGGCGGCACCGGCGGCGGCACCGGCGGCGGTCAGTGGGAA
GAAGGCGGCCCCATCGGGCAAGAAGGGATCCTCATCTGCCAAAGTGGCTG
GAGGCGGCGGCGCTGCCGGCGGGGTGGCCGGTGGCAAGCGAAGGGAGGAC
GCGGGGGCGGCGGCGGCGGCGGCAGGAGCGGCGGCGGCCCCGAGGAAGAC
CGTCAAGGACCGTCAAAAGGAGGCCAAGAAGAAGGGGCTCAAGCGCTTGT
AG
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