mRNA_E-siliculosus-1a_M_contig99.17740.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig99.17740.1
Unique NamemRNA_E-siliculosus-1a_M_contig99.17740.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig99.17740.1 vs. uniprot
Match: D8LP31_ECTSI (EsV-1-213 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP31_ECTSI)

HSP 1 Score: 445 bits (1144), Expect = 2.720e-141
Identity = 229/250 (91.60%), Postives = 237/250 (94.80%), Query Frame = 2
Query: 1637 MAPVSTAPKRIRVSSISKVKKQITTLEKPNFNANEVERATKKNTSFKCPVSPKKIFLAPTDDQVRQFYGARNFSGTPYDRLPQAEKLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRLQRVGSANSVFHGLPYSVDKSKSILQFMNMDFDDDDSRQRFFLQRDFAAISGKRGETNSSSVYGTSSAAIGLMWFAVVILGRPTAFESVVLPLNVVERRVL 2386
            MAPVS APKRI+VSSISK KKQITTL+KPNFNANEV+RATK+ TSFKCPVSPKKIFL PTD QVRQFYGARNFSGTPYDRLPQAEKLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGR QLEQRREALTRLQRVGSA SVFHGLPY VDKSKSILQFM MDFDDDDSRQRFFLQRDFA ISGKRGET+SSSVY + S+AIGLMWFA VILGRPTAFESVVLPLNV+ERRVL
Sbjct:    1 MAPVSPAPKRIKVSSISKAKKQITTLQKPNFNANEVKRATKETTSFKCPVSPKKIFLEPTDGQVRQFYGARNFSGTPYDRLPQAEKLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRNQLEQRREALTRLQRVGSARSVFHGLPYGVDKSKSILQFMKMDFDDDDSRQRFFLQRDFATISGKRGETSSSSVYASCSSAIGLMWFATVILGRPTAFESVVLPLNVMERRVL 250          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17740.1 vs. uniprot
Match: A0A6H5JVT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT4_9PHAE)

HSP 1 Score: 453 bits (1165), Expect = 7.040e-138
Identity = 234/250 (93.60%), Postives = 240/250 (96.00%), Query Frame = 2
Query: 1637 MAPVSTAPKRIRVSSISKVKKQITTLEKPNFNANEVERATKKNTSFKCPVSPKKIFLAPTDDQVRQFYGARNFSGTPYDRLPQAEKLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRLQRVGSANSVFHGLPYSVDKSKSILQFMNMDFDDDDSRQRFFLQRDFAAISGKRGETNSSSVYGTSSAAIGLMWFAVVILGRPTAFESVVLPLNVVERRVL 2386
            MAPVSTAPKRI+VSSISKVKKQITTLEKPNFNANEV+RATK  TSFKCPVSPKKIFL PTD QVRQFYGARNFSGTPYDRLPQAE LAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRLQRVGSA SVFHGLPYSVDKSKSILQFMNMDFDDDDSRQRFFLQRDFA ISGKRGET+SSSVY + S+AIGLMWFA VILGRPTAFESVVLPLNV+ERRVL
Sbjct:    1 MAPVSTAPKRIKVSSISKVKKQITTLEKPNFNANEVKRATKDTTSFKCPVSPKKIFLEPTDGQVRQFYGARNFSGTPYDRLPQAENLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRLQRVGSARSVFHGLPYSVDKSKSILQFMNMDFDDDDSRQRFFLQRDFATISGKRGETSSSSVYASCSSAIGLMWFATVILGRPTAFESVVLPLNVMERRVL 250          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17740.1 vs. uniprot
Match: B2KWI7_ECTSI (EsV-1-213-like protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI7_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 7.600e-66
Identity = 127/247 (51.42%), Postives = 172/247 (69.64%), Query Frame = 2
Query: 1649 STAPKRIRVSSISKVKKQITTLEKPNFNANEV-ERATKKNTSFKCPVSPKKIFLAPTDDQVRQFYGARNFSGTPYDRLPQAEKLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRLQRVGSANSVFHGLPYSVDKSKSILQFMNMDFDDDDSRQRFFLQRDFAAISGKRGETNSSSVYGTSSAAIGLMWFAVVILGRPTAFESVVLPLNVVERRVL 2386
            S A KR +VS  S  K+ +TTL+   F+  +V E  T    +F+CPV+   +F APT  QV+ FY +R+  G P+D LP+ EKLAW ES  DN TL+GF VY+QLFP LL+NRIKLN A++H+  +D ++ +GR +LEQRR A+ RL+R GS  SVF GLPY+VD S +IL FM MD +++D R RFF +R+F+ I  KRGE +SSSVY + S A+ L+WFA  +L RP   ES++LPL+V ERR +
Sbjct:    4 SRANKRAKVS--SSAKEPVTTLDNKAFDEKDVAESKTHTKMTFRCPVTIDNVFTAPTATQVKVFYESRSSKGEPFDHLPEGEKLAWTESFHDNKTLMGFIVYTQLFPKLLQNRIKLNAATYHWAHLDNSSEKGRTKLEQRRNAVDRLKRNGSTRSVFMGLPYTVDTSANILTFMKMDVEEEDERFRFFTKREFSMIFSKRGEVSSSSVYASCSMALSLLWFATAVLARPCCLESIILPLSVTERRAM 248          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17740.1 vs. uniprot
Match: A0A6H5L2T2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T2_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 4.650e-64
Identity = 125/247 (50.61%), Postives = 169/247 (68.42%), Query Frame = 2
Query: 1649 STAPKRIRVSSISKVKKQITTLEKPNFNANEV-ERATKKNTSFKCPVSPKKIFLAPTDDQVRQFYGARNFSGTPYDRLPQAEKLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRLQRVGSANSVFHGLPYSVDKSKSILQFMNMDFDDDDSRQRFFLQRDFAAISGKRGETNSSSVYGTSSAAIGLMWFAVVILGRPTAFESVVLPLNVVERRVL 2386
            S A KR++VS  S  K+ +TTL+   F+  E+ E  T    +F+CPV+   +F APT  QV+ FY +R+  G P+D LP+ EKLAW ES  DN TL+GF VY+QLFP LL+NRIKLN A++H+  +D ++ +GR +LEQRR A+ RL+R G   SVF GLPY VD S  IL +M MD +++D R RFF +R+F+ I  KRG+  SSSVY + S A+ L+WFA  IL RP   ES++LPL+V ERR +
Sbjct:    4 SRANKRVKVS--SSAKESVTTLDNKAFDEKELAESKTHTKMTFRCPVTIDNVFTAPTSTQVKVFYESRSSKGEPFDHLPEGEKLAWTESFHDNKTLMGFIVYTQLFPKLLQNRIKLNAATYHWAHLDNSSEKGRTKLEQRRNAVDRLKRNGFTRSVFMGLPYRVDTSADILAYMKMDVEEEDERFRFFTKREFSMIFSKRGQVGSSSVYASCSMALSLLWFATAILARPCCLESIILPLSVTERRAM 248          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17740.1 vs. uniprot
Match: A0A6H5K0T8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T8_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 9.260e-61
Identity = 123/247 (49.80%), Postives = 165/247 (66.80%), Query Frame = 2
Query: 1649 STAPKRIRVSSISKVKKQITTLEKPNFNANEV-ERATKKNTSFKCPVSPKKIFLAPTDDQVRQFYGARNFSGTPYDRLPQAEKLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRLQRVGSANSVFHGLPYSVDKSKSILQFMNMDFDDDDSRQRFFLQRDFAAISGKRGETNSSSVYGTSSAAIGLMWFAVVILGRPTAFESVVLPLNVVERRVL 2386
            S A KR +VS  S  K+ +TTL+   F+  +V E  T    +F+CPV+   +F APT  QV  FY + +  G P+D LP+ EKLAW ES  DN TL+GF VY+QLFP LL+NRIKLN A++H+  +D ++ +GR +LEQRR A+ RL+R G   SVF GLPY VD S  IL +M MD +++D R RFF +R+F+ I  KRG+  SSSVY + S A+ L+W A  IL RP   ES++LPL+V ERR +
Sbjct:    4 SRANKRAKVS--SSAKEPVTTLDTKAFDEKDVAESKTHTKMTFRCPVTIDNVFTAPTATQVNVFYESSSSKGEPFDHLPEGEKLAWTESFHDNKTLMGFIVYTQLFPKLLQNRIKLNAATYHWAHLDNSSEKGRTKLEQRRNAVDRLKRNGFTRSVFMGLPYRVDTSAHILAYMKMDVEEEDERCRFFTKREFSMIYSKRGQVGSSSVYASCSMALSLLWVATAILARPCCLESIILPLSVTERRAM 248          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17740.1 vs. uniprot
Match: Q8QN77_ESV1K (EsV-1-213 n=2 Tax=root TaxID=1 RepID=Q8QN77_ESV1K)

HSP 1 Score: 220 bits (560), Expect = 2.270e-57
Identity = 123/247 (49.80%), Postives = 166/247 (67.21%), Query Frame = 2
Query: 1649 STAPKRIRVSSISKVKKQITTLEKPNFNANEVERATKKN-TSFKCPVSPKKIFLAPTDDQVRQFYGARNFSGTPYDRLPQAEKLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRLQRVGSANSVFHGLPYSVDKSKSILQFMNMDFDDDDSRQRFFLQRDFAAISGKRGETNSSSVYGTSSAAIGLMWFAVVILGRPTAFESVVLPLNVVERRVL 2386
            S A KR ++SS +     +TTL +  F+ ++V   + +   ++K PV+ K +F  PT+ QV+ FY ARN SG P+DRL  AEKL W ESL DN  L+G+ VYSQL P   ENR+KL   S H+ +++ +T   R  LEQRR A  RL+R GS  S F+GLPYSVD +K++L++MN+DF+  D R RFFL R+FA  S + G+ N+SSVY + S A+ LM+F VVILGRP   ESV+LPL+V ER VL
Sbjct:    3 SQATKRTKLSSSA----GLTTLLRAGFDPSDVATLSPRTKVTYKSPVTLKNVFERPTESQVKVFYHARNHSGVPFDRLSDAEKLTWTESLHDNSCLMGYLVYSQLLPCAAENRVKLKSGSAHWNELNVSTDRAR--LEQRRAAYDRLRRNGSTLSAFYGLPYSVDMTKNVLEYMNIDFEQSDLRHRFFLGREFAMTSSEHGKMNASSVYTSCSKALSLMYFTVVILGRPCCLESVILPLSVTERSVL 243          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17740.1 vs. uniprot
Match: B2KWI6_ECTSI (EsV-1-213-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI6_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 2.060e-56
Identity = 117/230 (50.87%), Postives = 157/230 (68.26%), Query Frame = 2
Query: 1703 ITTLEKPNFNANEV-ERATKKNTSFKCPVSPKKIFLAPTDDQVRQFYGARN-FSGTPYDRLPQAEKLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRLQRVGSANSVFHGLPYSVDKSKSILQFMNMDFDDDDSRQRFFLQRDFAAISGKRGETNSSSVYGTSSAAIGLMWFAVVILGRPTAFESVVLPLNVVERRVL 2386
            ITTL+  +FN N+V E  T    +F+CPV+   +F APT  QV+ FY +R   SG P+  LP+ E LAW ES  DN TL+GF VYSQLFP LL+ RIKLN A++H+  +D A+ +GR +LEQRR A  RL+R G   SVF GLP+ VD   +IL FM MD D++D R RFF +R+F+ +  +RG+  SSSVY + S A+ L+WFA  +L RP   ESV+LPL+V ER+++
Sbjct:   16 ITTLDNIDFNVNDVAEPKTHTKMTFRCPVTIDSVFSAPTPAQVQMFYESRTGSSGKPFGDLPEDEILAWTESFHDNKTLMGFIVYSQLFPKLLQTRIKLNAATYHWGHLDPASEKGRTKLEQRRSADDRLKRNGFTPSVFRGLPHRVDTCANILAFMKMDVDEEDERLRFFNRREFSILVAERGQVGSSSVYSSCSMALSLLWFATTVLARPCCLESVILPLSVAERKMM 245          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17740.1 vs. uniprot
Match: A0A6H5J9C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C0_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 1.410e-54
Identity = 111/230 (48.26%), Postives = 154/230 (66.96%), Query Frame = 2
Query: 1700 QITTLEKPNFNANEVERA-TKKNTSFKCPVSPKKIFLAPTDDQVRQFYGARNFSGTPYDRLPQAEKLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRLQRVGSANSVFHGLPYSVDK--SKSILQFMNMDFDDDDSRQRFFLQRDFAAISGKRGETNSSSVYGTSSAAIGLMWFAVVILGRPTAFESVVLPLNVVERR 2380
            ++TTL+ P F+A++V  A +    SF+CPV+   +F  P  DQV  FY +RN    P+  L + E+  W ES  DN TL+GF VY+ LFP LL NRIKLN A++H+  +D ++ +GR +LEQRR A++RL+RVG A S+F GLP+ +D     SIL FMNM  +++D R RFF  R+F+ I  +RGE  SSSVY + S A+ L+WFA  +L RP   ES++LP+NV ERR
Sbjct:   23 RVTTLDNPAFDADDVAAAKSHAKMSFRCPVTIDSVFAPPAPDQVCTFYESRNHGSKPWGHLSEPEQREWAESCHDNKTLMGFIVYATLFPKLLRNRIKLNAATYHWAHLDSSSAKGRLKLEQRRGAVSRLRRVGFARSLFRGLPHRIDPVADTSILVFMNMSVEEEDERFRFFTNREFSMIYSERGEVGSSSVYSSCSTALSLLWFATTVLARPCCLESIILPINVRERR 252          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17740.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 1.930e-53
Identity = 115/229 (50.22%), Postives = 155/229 (67.69%), Query Frame = 2
Query: 1703 ITTLEKPNFNANEVERATKKN-TSFKCPVSPKKIFLAPTDDQVRQFYGARNFSGTPYDRLPQAEKLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRLQRVGSANSVFHGLPYSVDKSKSILQFMNMDFDDDDSRQRFFLQRDFAAISGKRGETNSSSVYGTSSAAIGLMWFAVVILGRPTAFESVVLPLNVVERRVL 2386
            +TTL +  FN ++V   + +   ++K PV+ K +F  PT+ QV+ FY +RN SG P++RL  AEKL W ESL DN  L+G+ VYSQL P   ENR+KL   S H+ +++ +T   R  L QRR A  RL+R GS  S F+GLPYSVD +K++L +MN+DF+  D R RFFL R+FA  S + G+ N+SSVY + S A+ LM+F VVILGRP   ESV+LPL+V ER VL
Sbjct:  552 LTTLLRAGFNPSDVATLSPRTKVTYKSPVTLKNVFDRPTESQVKIFYHSRNHSGVPFNRLSDAEKLIWTESLHDNSCLMGYLVYSQLLPCASENRVKLKSGSAHWNELNVSTDRAR--LGQRRAAYDRLRRNGSTFSAFYGLPYSVDMTKNVLAYMNIDFEQSDLRHRFFLGREFAMTSSEHGKINASSVYTSCSKALSLMYFTVVILGRPCCLESVILPLSVTERSVL 778          
BLAST of mRNA_E-siliculosus-1a_M_contig99.17740.1 vs. uniprot
Match: A0A6H5K1E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1E4_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 1.920e-52
Identity = 103/204 (50.49%), Postives = 141/204 (69.12%), Query Frame = 2
Query: 1775 KCPVSPKKIFLAPTDDQVRQFYGARNFSGTPYDRLPQAEKLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRLQRVGSANSVFHGLPYSVDKSKSILQFMNMDFDDDDSRQRFFLQRDFAAISGKRGETNSSSVYGTSSAAIGLMWFAVVILGRPTAFESVVLPLNVVERRVL 2386
            +CPV+   +F APT  QV+ FY + +  G P+D LP+ E+LAW ES  D  TL+GF VY+QL P LL+NRIKLN A++H+  +D +  +G  +LEQRR A+ RL+R GS  SVF  LPY VD S +IL FM +D +++D R RFF +R+F+ I  KRG+ +SSSVY + S A+ L+WFA   L RP   ES++LPL+V ERR +
Sbjct:    9 RCPVTIDNVFSAPTPTQVKVFYESSSSKGKPFDHLPKGEELAWTESFHDK-TLMGFIVYAQLLPKLLQNRIKLNAATYHWAHLDNSKEKGSTKLEQRRRAVDRLKRNGSTRSVFMRLPYRVDTSANILAFMKLDVEEEDERFRFFTKREFSMIFSKRGQVSSSSVYASCSMALSLLWFATAALARPCCLESIILPLSVTERRAM 211          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig99.17740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LP31_ECTSI2.720e-14191.60EsV-1-213 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP... [more]
A0A6H5JVT4_9PHAE7.040e-13893.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B2KWI7_ECTSI7.600e-6651.42EsV-1-213-like protein 1 n=1 Tax=Ectocarpus silicu... [more]
A0A6H5L2T2_9PHAE4.650e-6450.61Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0T8_9PHAE9.260e-6149.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q8QN77_ESV1K2.270e-5749.80EsV-1-213 n=2 Tax=root TaxID=1 RepID=Q8QN77_ESV1K[more]
B2KWI6_ECTSI2.060e-5650.87EsV-1-213-like protein 2 n=1 Tax=Ectocarpus silicu... [more]
A0A6H5J9C0_9PHAE1.410e-5448.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJP2_9PHAE1.930e-5350.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1E4_9PHAE1.920e-5250.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig99contigE-siliculosus-1a_M_contig99:7888..10273 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size750
Model size2388
Exons1
Hectar predicted targeting categoryother localisation
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936569.5727496-UTR-E-siliculosus-1a_M_contig99:7887..95231622936569.5727496-UTR-E-siliculosus-1a_M_contig99:7887..9523Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig99 7888..9523 +
1696251135.6870902-UTR-E-siliculosus-1a_M_contig99:7887..95231696251135.6870902-UTR-E-siliculosus-1a_M_contig99:7887..9523Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig99 7888..9523 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936569.5870364-CDS-E-siliculosus-1a_M_contig99:9523..102731622936569.5870364-CDS-E-siliculosus-1a_M_contig99:9523..10273Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 9524..10273 +
1696251135.6999004-CDS-E-siliculosus-1a_M_contig99:9523..102731696251135.6999004-CDS-E-siliculosus-1a_M_contig99:9523..10273Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig99 9524..10273 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig99.17740.1prot_E-siliculosus-1a_M_contig99.17740.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig99 9524..10273 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig99.17740.1

>prot_E-siliculosus-1a_M_contig99.17740.1 ID=prot_E-siliculosus-1a_M_contig99.17740.1|Name=mRNA_E-siliculosus-1a_M_contig99.17740.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=250bp
MAPVSTAPKRIRVSSISKVKKQITTLEKPNFNANEVERATKKNTSFKCPV
SPKKIFLAPTDDQVRQFYGARNFSGTPYDRLPQAEKLAWQESLRDNLTLI
GFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRL
QRVGSANSVFHGLPYSVDKSKSILQFMNMDFDDDDSRQRFFLQRDFAAIS
GKRGETNSSSVYGTSSAAIGLMWFAVVILGRPTAFESVVLPLNVVERRVL
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mRNA from alignment at E-siliculosus-1a_M_contig99:7888..10273+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig99.17740.1 ID=mRNA_E-siliculosus-1a_M_contig99.17740.1|Name=mRNA_E-siliculosus-1a_M_contig99.17740.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2386bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:7888..10273+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CCATGAACATGTCCACGTCGTGACCCATCTTCGACAACAACAGTCAGAGC CGTCAACAACATCTCTTTGGAGAACCGATTCGAGACTATCATCGTCAACA TCCACAAGTAATCCTACATACCAGACCACGAACATCGTCTCCTCCGGCCT ACTCACAACGAAGCCTGCCTCTCGTGTACCAATGTCTACATACCTGCTGT ATAACTGTTTTTGCGACACCGCCAACCGTGCTCGAACTCTGCAAGACTAC TTGAAAATACTAAAGCACGGTTCCGACACGGTTCAAACCCTATAGGACTG ACCCTGCCAAAAAAATGCACAGTTACTTGCACAGTTCACTTCCCGGTCCC ACGCCCCCTGTAAGTAGCCCCTGATACACTACACAGCAAAATCTATGGGG GGAGGGCAACTACAAAAAAATGCACAGTTCATTGCACGGTTCCACGCCCC CTGTAAGCTGCATCTAGTATGCTCCCGGAACTTTCTCACGTTCTTGTTGC GTCTCGTGCGACACCTGCGGCAGGTTTAGCTCAAAAAATGCGAAAGGAGA GGGGGGAGGGGGCGCTGGGGCACCCGGGATGGAAGCGTCAGATACGGCGA AAAAAAAATCTTGTGTCACAACTAGGAGGCGGCGCGCATTCTGGGACAAG TGATGACCCCCGTCCAAAGCTGGGAAGTACGTCCGTACTCGTGTTATTTG GGCAACTGCTCGTACACAGCCTACAGATCTCACTCCATGAAAATGCATGA GATGACACATAGGGGAGAAAAACCACACGTGTGCGACATCGGGCAGTGCA GGAAAGCATTCACACAGGCTTCTCATCTCAGGAGGCACAAGAAAACGCAC GGAAGACTGTAGAGCGCGGTACCAGCCTTTATACATTCGTCCATGTAGCT ATCGAGACACTCCTCTTTATAACATGAAATCTCCCACTCTTCCGTGTAAT CTTCAGAGGAGAAAGCATCACGAAAGTATACTATGCAGCCGTACACATCA CAGAAATCCTCACGTTCGTATCCCTCACTCAACCAGTAACACAGCGGTAA ACCTGAATTCAGGGGAATTGTTATGTACTTGCGCTTGACCATCTCTTTAA TGGTTTCCTTGCGATAGTTGTCGGAAACACCTGAAGAAGATATCATCAGC CTGGATTCTATCCATTCGTTCCACTTGGAAGCGTCATAGGGGATACACGA CTCCCAAGGACGTCCCGTAGCATCGGAGCCATCGGCGACCATCCAGTCGG CGAGATAGAACGCTTGGTATTGTACTACCACCGCCCAAATAGTCTCCTCC TCTTCCGCAGTTTCATGATTCGCGCGCTCAAGGCGACTTATTAGCTGGTG CTGGTCCCACCAGCTGTATAGTGGTCGTTCACCGATCGTGCATGAGATAA ACTCTTCGTGCAACATCTCGTAATCCGTGATTTTATGCAAGTGTTTGAAG GGACTGGGGTGGGTAGTGCGCTTCACGAGAGTAAATTAAAACCAACAACT TTGTCTGTGAACACACCTCGAACCCCTACACCCCTCGTGCAAAATCGGTC TCGTACGCGTGGCCCCCCTGCATTCTGAACGAACAACTTTTGTGTGGCTT CATGCCCCATCCAAGCTCACTCCCCCGACCTCAACCATGGCTCCTGTTTC CACCGCACCCAAGCGCATTAGAGTTTCAAGTATCTCGAAGGTGAAGAAAC AAATCACCACCCTGGAAAAACCGAATTTCAACGCAAACGAGGTCGAGCGC GCGACCAAGAAGAACACCAGCTTCAAGTGTCCCGTCTCGCCGAAAAAAAT ATTTCTTGCACCCACCGACGACCAGGTGCGTCAGTTCTACGGCGCCAGAA ATTTTAGTGGCACTCCATACGATCGGTTACCTCAAGCCGAGAAGCTCGCG TGGCAAGAGTCTCTGAGAGACAACCTGACCCTGATCGGTTTTCACGTCTA CTCCCAGCTCTTCCCGAGCCTGCTCGAAAATCGAATCAAACTGAACAAGG CGAGCCACCACTACAGAGACATCGACCGCGCGACGCCCGAGGGGAGGAAG CAACTAGAGCAGCGCCGAGAAGCCCTCACAAGACTCCAACGGGTAGGCTC GGCTAATTCTGTGTTTCACGGCCTCCCGTACTCTGTGGACAAATCGAAGA GTATACTACAGTTCATGAACATGGATTTCGACGACGACGATTCGAGGCAG CGGTTCTTCCTGCAGCGAGATTTTGCCGCAATATCTGGGAAGCGAGGGGA GACCAACTCTTCGAGCGTGTATGGAACATCTTCCGCTGCAATCGGGCTTA TGTGGTTCGCGGTGGTTATTCTTGGTCGCCCCACAGCTTTCGAATCGGTC GTCTTGCCCCTGAACGTGGTGGAGCGTCGCGTGCTC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig99:7888..10273+

>mRNA_E-siliculosus-1a_M_contig99.17740.1 ID=mRNA_E-siliculosus-1a_M_contig99.17740.1|Name=mRNA_E-siliculosus-1a_M_contig99.17740.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1500bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:7888..10273+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCTCCTGTTTCCACCGCACCCAAGCGCATTAGAGTTTCAAGTATCTC
GAAGGTGAAGAAACAAATCACCACCCTGGAAAAACCGAATTTCAACGCAA
ACGAGGTCGAGCGCGCGACCAAGAAGAACACCAGCTTCAAGTGTCCCGTC
TCGCCGAAAAAAATATTTCTTGCACCCACCGACGACCAGGTGCGTCAGTT
CTACGGCGCCAGAAATTTTAGTGGCACTCCATACGATCGGTTACCTCAAG
CCGAGAAGCTCGCGTGGCAAGAGTCTCTGAGAGACAACCTGACCCTGATC
GGTTTTCACGTCTACTCCCAGCTCTTCCCGAGCCTGCTCGAAAATCGAAT
CAAACTGAACAAGGCGAGCCACCACTACAGAGACATCGACCGCGCGACGC
CCGAGGGGAGGAAGCAACTAGAGCAGCGCCGAGAAGCCCTCACAAGACTC
CAACGGGTAGGCTCGGCTAATTCTGTGTTTCACGGCCTCCCGTACTCTGT
GGACAAATCGAAGAGTATACTACAGTTCATGAACATGGATTTCGACGACG
ACGATTCGAGGCAGCGGTTCTTCCTGCAGCGAGATTTTGCCGCAATATCT
GGGAAGCGAGGGGAGACCAACTCTTCGAGCGTGTATGGAACATCTTCCGC
TGCAATCGGGCTTATGTGGTTCGCGGTGGTTATTCTTGGTCGCCCCACAG
CTTTCGAATCGGTCGTCTTGCCCCTGAACGTGGTGGAGCGTCGCGTGCTC
ATGGCTCCTGTTTCCACCGCACCCAAGCGCATTAGAGTTTCAAGTATCTC
GAAGGTGAAGAAACAAATCACCACCCTGGAAAAACCGAATTTCAACGCAA
ACGAGGTCGAGCGCGCGACCAAGAAGAACACCAGCTTCAAGTGTCCCGTC
TCGCCGAAAAAAATATTTCTTGCACCCACCGACGACCAGGTGCGTCAGTT
CTACGGCGCCAGAAATTTTAGTGGCACTCCATACGATCGGTTACCTCAAG
CCGAGAAGCTCGCGTGGCAAGAGTCTCTGAGAGACAACCTGACCCTGATC
GGTTTTCACGTCTACTCCCAGCTCTTCCCGAGCCTGCTCGAAAATCGAAT
CAAACTGAACAAGGCGAGCCACCACTACAGAGACATCGACCGCGCGACGC
CCGAGGGGAGGAAGCAACTAGAGCAGCGCCGAGAAGCCCTCACAAGACTC
CAACGGGTAGGCTCGGCTAATTCTGTGTTTCACGGCCTCCCGTACTCTGT
GGACAAATCGAAGAGTATACTACAGTTCATGAACATGGATTTCGACGACG
ACGATTCGAGGCAGCGGTTCTTCCTGCAGCGAGATTTTGCCGCAATATCT
GGGAAGCGAGGGGAGACCAACTCTTCGAGCGTGTATGGAACATCTTCCGC
TGCAATCGGGCTTATGTGGTTCGCGGTGGTTATTCTTGGTCGCCCCACAG
CTTTCGAATCGGTCGTCTTGCCCCTGAACGTGGTGGAGCGTCGCGTGCTC
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