Homology
BLAST of mRNA_E-siliculosus-1a_M_contig983.17739.1 vs. uniprot
Match:
D7FZQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ7_ECTSI)
HSP 1 Score: 300 bits (767), Expect = 2.070e-102
Identity = 147/156 (94.23%), Postives = 152/156 (97.44%), Query Frame = 1
Query: 1 MIAQSRQCRLDKRVSGGRGKLHRCTGAIVNGKATSGCPVLARGCKQTDGTWKVTEVVLDHVACTGQASNKKQRINRRCVEGEAAALVSANHRITCPSLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYCDLLGRDNGNIVECKV 468
MI+QSRQCRLDKRVSGGRGKLHRCTGAI+NGKATSGCPV ARGCKQTDGTWKVTEVVLDHVACTGQA NKKQRINRRCVEGEAAALVSANH ITCPSLVKTLKATSGVDVSER+ASRMRADILGKGKDAIAKEYQLLQS CDLLGRDNGNIVEC++
Sbjct: 1 MISQSRQCRLDKRVSGGRGKLHRCTGAIINGKATSGCPVRARGCKQTDGTWKVTEVVLDHVACTGQAGNKKQRINRRCVEGEAAALVSANHSITCPSLVKTLKATSGVDVSERSASRMRADILGKGKDAIAKEYQLLQSSCDLLGRDNGNIVECQM 156
BLAST of mRNA_E-siliculosus-1a_M_contig983.17739.1 vs. uniprot
Match:
A0A6H5J5Y0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5Y0_9PHAE)
HSP 1 Score: 294 bits (752), Expect = 3.290e-98
Identity = 146/149 (97.99%), Postives = 147/149 (98.66%), Query Frame = 1
Query: 1 MIAQSRQCRLDKRVSGGRGKLHRCTGAIVNGKATSGCPVLARGCKQTDGTWKVTEVVLDHVACTGQASNKKQRINRRCVEGEAAALVSANHRITCPSLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYCDLLGRDNG 447
MIAQSRQCRLDKR+ GGRGKLHRCTGAIVNGKATSGCPVLARGCKQTDGTWKVTEVVLDHVACTGQASNKKQRINRRCVE EAAALVSANHRITCPSLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYCDLLGRDNG
Sbjct: 155 MIAQSRQCRLDKRIIGGRGKLHRCTGAIVNGKATSGCPVLARGCKQTDGTWKVTEVVLDHVACTGQASNKKQRINRRCVEREAAALVSANHRITCPSLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYCDLLGRDNG 303
BLAST of mRNA_E-siliculosus-1a_M_contig983.17739.1 vs. uniprot
Match:
A0A6H5KQC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQC0_9PHAE)
HSP 1 Score: 288 bits (736), Expect = 7.790e-96
Identity = 140/157 (89.17%), Postives = 146/157 (92.99%), Query Frame = 1
Query: 1 MIAQSRQCRLDKRVSGGRGKLHRCTGAIVNGKATSGCPVLARGCKQTDGTWKVTEVVLDHVACTGQASNKKQRINRRCVEGEAAALVSANHRITCPSLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYCDLLGRDNGNIVECKVS 471
MI+QSRQCRLDKR SGGR KLHRCTGAI+NGKATSGCPV ARGCKQTDGTWKVTE VLDHVACTGQA NKKQ INRRCVE +AAALVSANH ITCPSLVKTLKATSGVD+SERTA RMR DILGKG DAIAKEYQLLQ+YCDLLGRDNGNIVEC+VS
Sbjct: 1 MISQSRQCRLDKRDSGGRSKLHRCTGAIINGKATSGCPVRARGCKQTDGTWKVTEAVLDHVACTGQAGNKKQGINRRCVEKQAAALVSANHSITCPSLVKTLKATSGVDISERTAGRMRVDILGKGNDAIAKEYQLLQNYCDLLGRDNGNIVECRVS 157
BLAST of mRNA_E-siliculosus-1a_M_contig983.17739.1 vs. uniprot
Match:
A0A6H5JX21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX21_9PHAE)
HSP 1 Score: 284 bits (727), Expect = 1.170e-95
Identity = 137/157 (87.26%), Postives = 145/157 (92.36%), Query Frame = 1
Query: 1 MIAQSRQCRLDKRVSGGRGKLHRCTGAIVNGKATSGCPVLARGCKQTDGTWKVTEVVLDHVACTGQASNKKQRINRRCVEGEAAALVSANHRITCPSLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYCDLLGRDNGNIVECKVS 471
MI+ SRQCRLDKRVSGGRGKLHRCTGA++NGKATSGCPVLAR CK DGTWKVTEVVLDHVACTGQA NKKQRINRRCVE EAAALVS+N ITCP+L KTLKATSGVD+SERTA RMRADILGKGKD IAKEYQLLQSYCDLLGRDNGN+VECK +
Sbjct: 47 MISTSRQCRLDKRVSGGRGKLHRCTGAVINGKATSGCPVLARACKLHDGTWKVTEVVLDHVACTGQAGNKKQRINRRCVEEEAAALVSSNRSITCPALAKTLKATSGVDISERTAGRMRADILGKGKDTIAKEYQLLQSYCDLLGRDNGNVVECKAT 203
BLAST of mRNA_E-siliculosus-1a_M_contig983.17739.1 vs. uniprot
Match:
A0A6H5L4I0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I0_9PHAE)
HSP 1 Score: 283 bits (725), Expect = 5.620e-90
Identity = 137/155 (88.39%), Postives = 144/155 (92.90%), Query Frame = 1
Query: 1 MIAQSRQCRLDKRVSGGRGKLHRCTGAIVNGKATSGCPVLARGCKQTDGTWKVTEVVLDHVACTGQASNKKQRINRRCVEGEAAALVSANHRITCPSLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYCDLLGRDNGNIVECK 465
MI+ SRQCRLDKRVSGGRGKLHRCTGA++NGKATSGCPVLAR CK DGTWKVTEVVLDHVACTGQA NKKQRINRRCVE EAAALVS+N ITCP+L KTLKATSGVD+SERTA RMRADILGKGKD IAKEYQLLQSYCDLLGRDNGN+VECK
Sbjct: 47 MISTSRQCRLDKRVSGGRGKLHRCTGAVINGKATSGCPVLARACKLHDGTWKVTEVVLDHVACTGQAGNKKQRINRRCVEEEAAALVSSNRSITCPALAKTLKATSGVDISERTAGRMRADILGKGKDTIAKEYQLLQSYCDLLGRDNGNVVECK 201
BLAST of mRNA_E-siliculosus-1a_M_contig983.17739.1 vs. uniprot
Match:
A0A6H5L768_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L768_9PHAE)
HSP 1 Score: 252 bits (643), Expect = 1.740e-81
Identity = 126/136 (92.65%), Postives = 127/136 (93.38%), Query Frame = 1
Query: 64 HRCTGAIVNGKATSGCPVLARGCKQTDGTWKVTEVVLDHVACTGQASNKKQRINRRCVEGEAAALVSANHRITCPSLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYCDLLGRDNGNIVECKVS 471
H CTGAIVNGKATSGCPV ARGCKQTDGTWKV +VVLDHVA TGQA NKKQRINRRCVEGEA LVSANHRITCPSLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSY DLLGRDN NIVECKVS
Sbjct: 19 HYCTGAIVNGKATSGCPVRARGCKQTDGTWKVMDVVLDHVARTGQAGNKKQRINRRCVEGEATGLVSANHRITCPSLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYGDLLGRDNRNIVECKVS 154
BLAST of mRNA_E-siliculosus-1a_M_contig983.17739.1 vs. uniprot
Match:
A0A6H5JZH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH1_9PHAE)
HSP 1 Score: 105 bits (263), Expect = 1.620e-23
Identity = 55/96 (57.29%), Postives = 60/96 (62.50%), Query Frame = 1
Query: 1 MIAQSRQCRLDKRVSGGRGKLHRCTGAIVNGKATSGCPVLARGCKQTDGTWKVTEVVLDHVACTGQASNKKQRINRRCVEGEAAALVSANHRITCP 288
MI++ RQC DKR CPV ARGCKQ DGTWKVTEVVLD VAC GQA N+KQR+NRRC E EA ALV +NH ITCP
Sbjct: 244 MISKPRQCGRDKRRR---------------------CPVRARGCKQNDGTWKVTEVVLDRVACIGQAGNEKQRVNRRCAEEEAMALVRSNHSITCP 318
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig983.17739.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 7
0 1 Expect = 2.07e-102 / Id = 94.23 Expect = 3.29e-98 / Id = 97.99 Expect = 7.79e-96 / Id = 89.17 Expect = 1.17e-95 / Id = 87.26 Expect = 5.62e-90 / Id = 88.39 Expect = 1.74e-81 / Id = 92.65 Expect = 1.62e-23 / Id = 57.29 Sequence D7FZQ7_ECTSI A0A6H5J5Y0_9PHAE A0A6H5KQC0_9PHAE A0A6H5JX21_9PHAE A0A6H5L4I0_9PHAE A0A6H5L768_9PHAE A0A6H5JZH1_9PHAE
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig983.17739.1
>prot_E-siliculosus-1a_M_contig983.17739.1 ID=prot_E-siliculosus-1a_M_contig983.17739.1|Name=mRNA_E-siliculosus-1a_M_contig983.17739.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=159bp
MIAQSRQCRLDKRVSGGRGKLHRCTGAIVNGKATSGCPVLARGCKQTDGT WKVTEVVLDHVACTGQASNKKQRINRRCVEGEAAALVSANHRITCPSLVK TLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYCDLLGRDNGN IVECKVSH* back to top mRNA from alignment at E-siliculosus-1a_M_contig983:2158..2634-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig983.17739.1 ID=mRNA_E-siliculosus-1a_M_contig983.17739.1|Name=mRNA_E-siliculosus-1a_M_contig983.17739.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=477bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig983:2158..2634- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)ATGATCGCACAGTCTAGGCAGTGCCGGCTAGACAAGCGTGTTAGTGGCGG
TCGGGGAAAGCTCCACCGTTGCACGGGAGCGATCGTCAACGGGAAGGCGA
CATCCGGCTGCCCGGTGCTTGCGCGGGGGTGCAAGCAAACCGATGGCACC
TGGAAGGTGACGGAGGTGGTCCTCGATCATGTGGCGTGCACCGGCCAGGC
CAGTAACAAAAAGCAGCGGATCAATCGCCGATGTGTGGAGGGGGAGGCAG
CGGCGCTCGTGAGCGCCAACCACAGGATCACCTGTCCCTCGCTGGTGAAG
ACGCTCAAGGCAACCTCCGGCGTGGATGTCAGCGAGAGGACAGCTAGCAG
GATGCGGGCGGACATCCTCGGCAAGGGAAAGGACGCGATCGCGAAGGAGT
ACCAACTCCTCCAGAGCTACTGCGACCTCCTCGGGAGGGACAACGGCAAC
ATCGTGGAGTGCAAAGTGAGTCATTGA back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig983:2158..2634-
>mRNA_E-siliculosus-1a_M_contig983.17739.1 ID=mRNA_E-siliculosus-1a_M_contig983.17739.1|Name=mRNA_E-siliculosus-1a_M_contig983.17739.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=954bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig983:2158..2634- (Ectocarpus siliculosus Ec864m_EcPH12_78m male) ATGATCGCACAGTCTAGGCAGTGCCGGCTAGACAAGCGTGTTAGTGGCGG TCGGGGAAAGCTCCACCGTTGCACGGGAGCGATCGTCAACGGGAAGGCGA CATCCGGCTGCCCGGTGCTTGCGCGGGGGTGCAAGCAAACCGATGGCACC TGGAAGGTGACGGAGGTGGTCCTCGATCATGTGGCGTGCACCGGCCAGGC CAGTAACAAAAAGCAGCGGATCAATCGCCGATGTGTGGAGGGGGAGGCAG CGGCGCTCGTGAGCGCCAACCACAGGATCACCTGTCCCTCGCTGGTGAAG ACGCTCAAGGCAACCTCCGGCGTGGATGTCAGCGAGAGGACAGCTAGCAG GATGCGGGCGGACATCCTCGGCAAGGGAAAGGACGCGATCGCGAAGGAGT ACCAACTCCTCCAGAGCTACTGCGACCTCCTCGGGAGGGACAACGGCAAC ATCGTGGAGTGCAAAGTGAGTCATTGAATGATCGCACAGTCTAGGCAGTG CCGGCTAGACAAGCGTGTTAGTGGCGGTCGGGGAAAGCTCCACCGTTGCA CGGGAGCGATCGTCAACGGGAAGGCGACATCCGGCTGCCCGGTGCTTGCG CGGGGGTGCAAGCAAACCGATGGCACCTGGAAGGTGACGGAGGTGGTCCT CGATCATGTGGCGTGCACCGGCCAGGCCAGTAACAAAAAGCAGCGGATCA ATCGCCGATGTGTGGAGGGGGAGGCAGCGGCGCTCGTGAGCGCCAACCAC AGGATCACCTGTCCCTCGCTGGTGAAGACGCTCAAGGCAACCTCCGGCGT GGATGTCAGCGAGAGGACAGCTAGCAGGATGCGGGCGGACATCCTCGGCA AGGGAAAGGACGCGATCGCGAAGGAGTACCAACTCCTCCAGAGCTACTGC GACCTCCTCGGGAGGGACAACGGCAACATCGTGGAGTGCAAAGTGAGTCA TTGA back to top