mRNA_E-siliculosus-1a_M_contig98.17737.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig98.17737.1 vs. uniprot
Match: D1J7C1_ECTSI (Uncharacterized protein ycf34 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7C1_ECTSI) HSP 1 Score: 196 bits (498), Expect = 9.260e-64 Identity = 89/92 (96.74%), Postives = 92/92 (100.00%), Query Frame = 1 Query: 1 MCICLNCDRINSCHIYFIIEKQHQETKKDVEKSFSPQAPILLCLNFFSKQGIYLLEWDVNECLSYQEKPGSWLGYQQKNLNLSSYLVFDLLF 276
MCICLNCDRINSCHIYF+IEKQHQETKKDVEKSFSPQAP+LLCLNFFSKQGIYLLEWDVNECLSYQEKPG+WLGYQQKNLNLSSYLVFDLLF
Sbjct: 1 MCICLNCDRINSCHIYFLIEKQHQETKKDVEKSFSPQAPVLLCLNFFSKQGIYLLEWDVNECLSYQEKPGNWLGYQQKNLNLSSYLVFDLLF 92
BLAST of mRNA_E-siliculosus-1a_M_contig98.17737.1 vs. uniprot
Match: A0A6B7F232_9PHAE (Uncharacterized protein n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7F232_9PHAE) HSP 1 Score: 154 bits (390), Expect = 2.790e-47 Identity = 67/92 (72.83%), Postives = 80/92 (86.96%), Query Frame = 1 Query: 1 MCICLNCDRINSCHIYFIIEKQHQETKKDVEKSFSPQAPILLCLNFFSKQGIYLLEWDVNECLSYQEKPGSWLGYQQKNLNLSSYLVFDLLF 276
MCICLNC RIN C +YF+IE+QHQE K +K FSPQAPIL C+NFFSK+ +YLLEWDVNECLSY+EKPGSWLG +QK L++SSYL+FD+LF
Sbjct: 1 MCICLNCARINGCRVYFLIEQQHQEMIKGTDKYFSPQAPILFCINFFSKKSLYLLEWDVNECLSYEEKPGSWLGGEQKRLSVSSYLLFDILF 92
BLAST of mRNA_E-siliculosus-1a_M_contig98.17737.1 vs. uniprot
Match: A0A344PFD3_9PHAE (Uncharacterized protein n=1 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A344PFD3_9PHAE) HSP 1 Score: 154 bits (388), Expect = 5.630e-47 Identity = 71/92 (77.17%), Postives = 77/92 (83.70%), Query Frame = 1 Query: 1 MCICLNCDRINSCHIYFIIEKQHQETKKDVEKSFSPQAPILLCLNFFSKQGIYLLEWDVNECLSYQEKPGSWLGYQQKNLNLSSYLVFDLLF 276
MCICLNCDRINSC +Y IIE+QHQE K K FSPQAPILLC+NFFSK+ +Y LEWDVNECLSYQEKPGSWL QK LN SSYL+FDLLF
Sbjct: 1 MCICLNCDRINSCRVYSIIEQQHQEKLKCQTKPFSPQAPILLCINFFSKKRLYTLEWDVNECLSYQEKPGSWLESNQKRLNFSSYLLFDLLF 92
BLAST of mRNA_E-siliculosus-1a_M_contig98.17737.1 vs. uniprot
Match: A0A1I9LVZ6_9PHAE (Uncharacterized protein n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVZ6_9PHAE) HSP 1 Score: 153 bits (387), Expect = 8.000e-47 Identity = 68/92 (73.91%), Postives = 78/92 (84.78%), Query Frame = 1 Query: 1 MCICLNCDRINSCHIYFIIEKQHQETKKDVEKSFSPQAPILLCLNFFSKQGIYLLEWDVNECLSYQEKPGSWLGYQQKNLNLSSYLVFDLLF 276
MCICLNCDRIN C +YFIIE+QHQE K ++KSFSPQ PIL+CLNFF K+ +Y++EWDVNECLSYQEKPGSWL QK L SSYL+FDLLF
Sbjct: 1 MCICLNCDRINKCRLYFIIEEQHQEKIKGLKKSFSPQGPILVCLNFFFKKRLYIIEWDVNECLSYQEKPGSWLDRNQKKLKFSSYLLFDLLF 92
BLAST of mRNA_E-siliculosus-1a_M_contig98.17737.1 vs. uniprot
Match: A0A5A4MIQ9_9PHAE (Uncharacterized protein n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MIQ9_9PHAE) HSP 1 Score: 146 bits (368), Expect = 6.510e-44 Identity = 66/92 (71.74%), Postives = 76/92 (82.61%), Query Frame = 1 Query: 1 MCICLNCDRINSCHIYFIIEKQHQETKKDVEKSFSPQAPILLCLNFFSKQGIYLLEWDVNECLSYQEKPGSWLGYQQKNLNLSSYLVFDLLF 276
MCICLNCDRIN C +Y IIE+QH+E K K FSPQAPILLC+NFFSK+ +Y LEWDV+ECLSYQEKPGSWL +K+LN SSYL+FDL F
Sbjct: 1 MCICLNCDRINRCRVYSIIEQQHKEKMKCQTKPFSPQAPILLCINFFSKKRLYALEWDVSECLSYQEKPGSWLESNKKSLNFSSYLLFDLFF 92
BLAST of mRNA_E-siliculosus-1a_M_contig98.17737.1 vs. uniprot
Match: A0A0R6M4S6_UNDPI (Conserved hypothetical plastid protein n=9 Tax=Alariaceae TaxID=2887 RepID=A0A0R6M4S6_UNDPI) HSP 1 Score: 142 bits (357), Expect = 3.290e-42 Identity = 62/95 (65.26%), Postives = 78/95 (82.11%), Query Frame = 1 Query: 1 MCICLNCDRINSCHIYFIIEKQHQETKKDV---EKSFSPQAPILLCLNFFSKQGIYLLEWDVNECLSYQEKPGSWLGYQQKNLNLSSYLVFDLLF 276
MCICLNC RI++C +YFI+E++H E KK+ +++F PQ+P LLC+NFFSK+ +YLLEWDVNECLSYQEKP SWL + QKN SSYL+FDLLF
Sbjct: 1 MCICLNCGRIDNCEVYFIVEQKHNEKKKNYYTKKRTFFPQSPTLLCINFFSKKNVYLLEWDVNECLSYQEKPASWLSFNQKNARNSSYLLFDLLF 95
BLAST of mRNA_E-siliculosus-1a_M_contig98.17737.1 vs. uniprot
Match: A0A7U1AQL9_9PHAE (Conserved hypothetical plastid protein n=2 Tax=Laminaria TaxID=33637 RepID=A0A7U1AQL9_9PHAE) HSP 1 Score: 139 bits (350), Expect = 4.200e-41 Identity = 60/94 (63.83%), Postives = 77/94 (81.91%), Query Frame = 1 Query: 1 MCICLNCDRINSCHIYFIIEKQHQETKKDVEKS--FSPQAPILLCLNFFSKQGIYLLEWDVNECLSYQEKPGSWLGYQQKNLNLSSYLVFDLLF 276
MCICLNC+RI++C +Y I+E++H E KK +K+ F PQ+P LLC+NFFSK+ +Y++EWDVNECLSYQEKPGSW+ + QKN SSYL FDLLF
Sbjct: 1 MCICLNCNRIDNCEVYLIVEQKHNEKKKSKKKNRPFFPQSPTLLCINFFSKKNLYIIEWDVNECLSYQEKPGSWMSFHQKNSRHSSYLSFDLLF 94
BLAST of mRNA_E-siliculosus-1a_M_contig98.17737.1 vs. uniprot
Match: A0A8F0F920_9PHAE (Uncharacterized protein n=1 Tax=Laminaria ephemera TaxID=309364 RepID=A0A8F0F920_9PHAE) HSP 1 Score: 139 bits (349), Expect = 5.300e-41 Identity = 62/94 (65.96%), Postives = 77/94 (81.91%), Query Frame = 1 Query: 1 MCICLNCDRINSCHIYFIIEKQHQETKKDVEKS--FSPQAPILLCLNFFSKQGIYLLEWDVNECLSYQEKPGSWLGYQQKNLNLSSYLVFDLLF 276
MCICLNC+RI++C +Y I+E++H E KK +K+ F PQ+P LLC+NFFSK+ +YLLEWDVNECLSYQEKPGSW+ + QKN SSYL FDLLF
Sbjct: 1 MCICLNCNRIDNCEVYSIVEQKHNEKKKYQKKTRQFFPQSPTLLCINFFSKKKLYLLEWDVNECLSYQEKPGSWMSFNQKNFQHSSYLSFDLLF 94
BLAST of mRNA_E-siliculosus-1a_M_contig98.17737.1 vs. uniprot
Match: A0A516ICQ1_9PHAE (Conserved hypothetical plastid protein n=2 Tax=Lessonia TaxID=105411 RepID=A0A516ICQ1_9PHAE) HSP 1 Score: 138 bits (348), Expect = 7.520e-41 Identity = 63/94 (67.02%), Postives = 76/94 (80.85%), Query Frame = 1 Query: 1 MCICLNCDRINSCHIYFIIEKQHQETKKDVEKS--FSPQAPILLCLNFFSKQGIYLLEWDVNECLSYQEKPGSWLGYQQKNLNLSSYLVFDLLF 276
MCICLNC+RI++C IYFI+E++H E KK +K F PQ+P LLC+NFFSK+ +YL EWDVNECLSYQEKPGSW+ + QKN SSYL FDLLF
Sbjct: 1 MCICLNCNRIDNCEIYFIVEQKHNEKKKYHKKKRPFFPQSPTLLCINFFSKRKLYLSEWDVNECLSYQEKPGSWMSFSQKNSRHSSYLSFDLLF 94
BLAST of mRNA_E-siliculosus-1a_M_contig98.17737.1 vs. uniprot
Match: A0A7U3NIB4_9PHAE (Uncharacterized protein n=7 Tax=Laminariaceae TaxID=33636 RepID=A0A7U3NIB4_9PHAE) HSP 1 Score: 137 bits (345), Expect = 2.160e-40 Identity = 61/94 (64.89%), Postives = 73/94 (77.66%), Query Frame = 1 Query: 1 MCICLNCDRINSCHIYFIIEKQHQETKKDVEKS--FSPQAPILLCLNFFSKQGIYLLEWDVNECLSYQEKPGSWLGYQQKNLNLSSYLVFDLLF 276
MCICLNC+RIN+C +YFI+E++H E K K F PQ+P LLC+NFFSK+ +YLLEWDVNECLSYQEKPGSW+ + QK SSYL FDL F
Sbjct: 1 MCICLNCNRINNCDVYFIVEQKHNEKKNSHTKKRPFFPQSPTLLCINFFSKKNLYLLEWDVNECLSYQEKPGSWMAFDQKKSRNSSYLSFDLFF 94 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17737.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig98.17737.1 >prot_E-siliculosus-1a_M_contig98.17737.1 ID=prot_E-siliculosus-1a_M_contig98.17737.1|Name=mRNA_E-siliculosus-1a_M_contig98.17737.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=93bp MCICLNCDRINSCHIYFIIEKQHQETKKDVEKSFSPQAPILLCLNFFSKQback to top mRNA from alignment at E-siliculosus-1a_M_contig98:652383..652661- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig98.17737.1 ID=mRNA_E-siliculosus-1a_M_contig98.17737.1|Name=mRNA_E-siliculosus-1a_M_contig98.17737.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=279bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:652383..652661- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig98:652383..652661- >mRNA_E-siliculosus-1a_M_contig98.17737.1 ID=mRNA_E-siliculosus-1a_M_contig98.17737.1|Name=mRNA_E-siliculosus-1a_M_contig98.17737.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=558bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:652383..652661- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |