mRNA_E-siliculosus-1a_M_contig98.17728.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig98.17728.1
Unique NamemRNA_E-siliculosus-1a_M_contig98.17728.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig98.17728.1 vs. uniprot
Match: A0A6H5KFT2_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFT2_9PHAE)

HSP 1 Score: 660 bits (1703), Expect = 2.870e-233
Identity = 377/448 (84.15%), Postives = 386/448 (86.16%), Query Frame = 1
Query:    7 MASREVHIPTVNIASLLTTSGESFSEDDRAATANALLRACETHGLFFVVGHGITTSQRRLAFDNARRFFSLPEAEKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPTDQPPNNALQGPNIWPDSDSLGEGWRDSMSALFRLMVSVNEAVARGLSFSLDLGLQDLPALCQGGDTISLLRLFHYFPYSNDAASNXXXXXXXXXXXXXXXXXXCKDDDDGS------AKAVASTGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGSSPHTDWGLSTSILQDGAGGLQFLEQATQRWVDVPCAQEDALVFNCGDYLSLLSNGRLKSPVHQVVTTGVERTSFVFFYYPSFDAKLPVTAPRDASSSAGATRTNPAAAAVTATAAATEEQVAREPRETIGPYNTLLDLRNKQRGGDAXXXXXXXXDDASFGQYLARKWGDVFRE 1332
            MASR VHIPTVNI+SLLT SGESFSE+DRA+T+NALLRACETHGLFFVVGHGITTSQRRLAFDNARRFFSLPEA KRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWP DQPPNNALQGPNIWPDSDSLG+GWRDS+SALFRLMVSVNEAVARGLS S DLGLQDLPALCQGGDTISLLRLFHYFPYSNDAASN XXXXXXXXXXXXXXXXX              A AVASTG                 XXXXXXXXXXXX IGSSPHTDWGLST+ILQDGAGGLQFLEQATQRWVDV C+QEDALVFNCGDYLSLLSNGRLKSPVHQVVTTGVERTSFVFFYYPSFDAKLPV APRDASSSAGAT TNPAAAA      ATE+QV REPRE  GPYNTLLDLRNKQR GDA        DDASFGQYLARKWG VFRE
Sbjct:    1 MASRGVHIPTVNISSLLTASGESFSEEDRASTSNALLRACETHGLFFVVGHGITTSQRRLAFDNARRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIWPDSDSLGQGWRDSLSALFRLMVSVNEAVARGLSLSQDLGLQDLPALCQGGDTISLLRLFHYFPYSNDAASNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMAVASTGFSTGSRSSGNDCTGNSGXXXXXXXXXXXXNIGSSPHTDWGLSTTILQDGAGGLQFLEQATQRWVDVSCSQEDALVFNCGDYLSLLSNGRLKSPVHQVVTTGVERTSFVFFYYPSFDAKLPVVAPRDASSSAGATPTNPAAAA------ATEKQVPREPREAFGPYNTLLDLRNKQRDGDAAAASAVDEDDASFGQYLARKWGAVFRE 442          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17728.1 vs. uniprot
Match: D7G0Y4_ECTSI (Putative oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y4_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 2.030e-114
Identity = 232/256 (90.62%), Postives = 234/256 (91.41%), Query Frame = 1
Query:  328 FSYGYPWPTDQPPNNALQGPNIWPDSDSLGEGWRDSMSALFRLMVSVNEAVARGLSFSLDLGLQDLPALCQGGDTISLLRLFHYFPYSNDAASNXXXXXXXXXXXXXXXXXXCKDDDDGSAKAVASTGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGSSPHTDWGLSTSILQDGAGGLQFLEQATQRWVDVPCAQEDALVFNCGDYLSLLSNGRLKSPVHQVVTTGVERTSFVFFYY------PSFDAKLPVT 1077
            F   YPWP DQPPNNALQGPNIWPDSDSLGE WRDSMSALFRLMVSVNEAVARGLS SLDLGLQDLPALCQGGDTISLLRLFHYFPYSNDAASN XXXXXXXXXXXXXXXXX KDDDDGSAKAVAST  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX GSSPHTDWGLSTSILQDGAGGLQFLEQATQRWVDVPCAQEDALVFNCGDYLSLLSNGRLKSPVHQVVTTGVERTS VFFYY      PS+ + L  T
Sbjct:    5 FPRRYPWPKDQPPNNALQGPNIWPDSDSLGEDWRDSMSALFRLMVSVNEAVARGLSLSLDLGLQDLPALCQGGDTISLLRLFHYFPYSNDAASNSXXXXXXXXXXXXXXXXXXKDDDDGSAKAVASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSPHTDWGLSTSILQDGAGGLQFLEQATQRWVDVPCAQEDALVFNCGDYLSLLSNGRLKSPVHQVVTTGVERTSVVFFYYSIPASTPSYPSPLRAT 260          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17728.1 vs. uniprot
Match: A0A507EEJ9_9FUNG (Fe2OG dioxygenase domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EEJ9_9FUNG)

HSP 1 Score: 253 bits (646), Expect = 2.920e-75
Identity = 160/425 (37.65%), Postives = 208/425 (48.94%), Query Frame = 1
Query:   70 ESFSEDDRAATANALLRACETHGLFFVVGHGI---TTSQRRLAFDNARRFFSLPEAEKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPTDQPPNNALQGPNIWPDSDSLGEGWRDSMSALFRLMVSVNEAVARGLSFSLDLGLQDLPALCQGGDTISLLRLFHYFPYSNDAASNXXXXXXXXXXXXXXXXXXCKDDDDGSAKAVASTGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGSSPHTDWGLSTSILQ-DGAGGLQFLEQATQRWVDVPCAQEDALVFNCGDYLSLLSNGRLKSPVHQVVTTGVERTSFVFFYYPSFDAKLPVTAPRDASSSAGATRTNPAAAAVTATAAATEEQVAREPRETIGPYNTLLDLRNKQRGGDAXXXXXXXXDDASFGQYLARKWGDVFRE 1332
            E+ SE  RAA A  L RAC THG F++    I   T   R   F+ A+ FF+LP+  K KIP + GGFTRGYI  GGESGS   E KEAFSYGYPWP+ + P N+LQGPN WPD+ ++   W+ ++   +  MV V EAV R LS +L +  +  P+ C+ GDTISL+RLFHYFP S  A                          DGS  A A                                 IGSS HTDWG  T +LQ +G  GLQ  +     W+DVP      +V N GDYLSL++ GR+KSP+H+VVT+  ER S VFFYYP+++AK+P+                                   +  ET    +  +D ++K                 SFG+Y+A KW  VFR+
Sbjct:   21 EASSEAQRAAVAEELARACATHGAFYLKSGEIGKLTEDARLKVFNAAQEFFALPDDVKNKIPIRAGGFTRGYIPIGGESGSQAVEVKEAFSYGYPWPSTRTPENSLQGPNEWPDASAVSPHWQKTLEEFYAGMVQVAEAVTRALSVALGMDAEYFPSFCKEGDTISLMRLFHYFP-SEKA--------------------------DGSGLAAAGA------------------------------RIGSSAHTDWGFLTLVLQQEGVTGLQVAD-TNGEWIDVPPVAGTFIV-NAGDYLSLMTRGRVKSPLHRVVTSDKERLSLVFFYYPTYEAKIPMM---------------------------------EKDSETASRISLFVD-QSKSTSSAEQQTLSSAETIGSFGEYIANKWSQVFRD 352          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17728.1 vs. uniprot
Match: A0A0L0HJP3_SPIPD (Fe2OG dioxygenase domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HJP3_SPIPD)

HSP 1 Score: 237 bits (604), Expect = 1.060e-68
Identity = 159/450 (35.33%), Postives = 206/450 (45.78%), Query Frame = 1
Query:    4 RMASREVHIPTVNIASLLTTSGESFSEDD----RAATANALLRACETHGLFFVVGHGI---TTSQRRLAFDNARRFFSLPEAEKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPTDQPPNNALQGPNIWPDSDSLGEGWRDSMSALFRLMVSVNEAVARGLSFSLDLGLQDLPALCQGGDTISLLRLFHYFPYSNDAASNXXXXXXXXXXXXXXXXXXCKDDDDGSAKAVASTGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGSSPHTDWGLSTSILQ-DGAGGLQFLEQATQRWVDVPCAQEDALVFNCGDYLSLLSNGRLKSPVHQVVTTGVERTSFVFFYYPSFDAKLPVTAPRDASSSAGATRTNPAAAAVTATAAATEEQVAREPRETIGPYNTLLDLRNKQRGGDAXXXXXXXXDDASFGQYLARKWGDVFR 1329
            ++A+    I  + I  +   +  + S +D    +A+T   L  AC THG F+V   GI   T   R+  F+ A+ FF+LP+  K KIP + GGFTRGYIG G ESGS   E KEAFSYGYPW  D  P N LQGPN WPD+  L   WR ++   +  MV V EAV R LS +L +    LP+ C  G+TISL+RLFHYFP                              D  +        P                             IGSSPHTDWG  T I+Q DG  GLQ  +     W DVP      LV N GDYLSLL+NGR+ SP+H+VV++  ER S VFFYYP +DA++P+                            TE+  A      I          + ++  +            +FG Y+  KWG V+R
Sbjct:   21 KLAAMSTGIAPLPIIDVTPFANNASSNEDNAREKASTVEQLAAACVTHGAFYVKSGGIGNLTREFRKEVFNAAQDFFNLPQDIKNKIPIRSGGFTRGYIGLGAESGSSALEVKEAFSYGYPWSLDVAPTNNLQGPNEWPDTSDLDSTWRKTLETFYAGMVQVAEAVTRALSVALGMDEGYLPSFCAEGETISLMRLFHYFP------------------------------DKTTDHITGQRSPSDR--------------------------IGSSPHTDWGFLTLIMQQDGVTGLQIAD-GEGGWTDVPPIPGTFLV-NAGDYLSLLTNGRVVSPLHRVVSSDQERLSMVFFYYPRYDAQIPLL---------------------------TEDGPAARISLFIDQSQNTPRANDNEKEKEQLAIRAEEISKMAFGDYIFSKWGQVYR 385          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17728.1 vs. uniprot
Match: L1JXA8_GUITC (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JXA8_GUITC)

HSP 1 Score: 217 bits (553), Expect = 1.020e-62
Identity = 129/320 (40.31%), Postives = 164/320 (51.25%), Query Frame = 1
Query:  121 ACETHGLFFVVGHGITTSQRRLAFDNARRFFSLPEAEKRKIPAKK-GGFTRGYIGFGGESGSH-LRECKEAFSYGYPWPTDQPPNNALQGPNIWPDSDSLGEGWRDSMSALFRLMVSVNEAVARGLSFSLDLGLQDLPALCQGGDTISLLRLFHYFPYSNDAASNXXXXXXXXXXXXXXXXXXCKDDDDGSAKAVASTGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGSSPHTDWGLSTSILQDGA-GGLQFLEQATQRWVDVPCAQEDALVFNCGDYLSLLSNGRLKSPVHQVVTTGVERTSFVFFYYPSFDAKLP 1071
            ACE+ G+F++ GHGI+  + + AF+++R FF LP   K  +P KK GGFTRGY   G ESGS  L E KEAFSYGY W  D  P N LQGPNIWPD    G  WR  +  +F   V ++E +   ++ +L L       LC+GGDTISL+R+FHY P  + +AS                    KD                                           IGSSPHTDWG  T ILQD     LQ  +  T++W DVP      LV N GDY+SL++  R KSP+H+V     ER SFVFFYY +F+A +P
Sbjct:    5 ACESTGMFYLTGHGISPEEMQKAFESSRHFFELPAETKNALPCKKAGGFTRGYFSVGEESGSPTLFEAKEAFSYGYEWDPDLKPENPLQGPNIWPDLPGFGYDWRQPLQNIFTKKVQISEQLTDAMAIALGLEADSFSDLCKGGDTISLMRMFHYLPLLSASAS-------------------VKDS------------------------------------RLPQELIGSSPHTDWGWLTIILQDPTVTSLQLFDSKTKKWSDVPPIPGHLLV-NIGDYVSLMTKSRFKSPLHRVKINDRERYSFVFFYYTAFNATVP 268          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17728.1 vs. uniprot
Match: A0A8H4A5N3_GIGMA (Clavaminate synthase-like protein n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4A5N3_GIGMA)

HSP 1 Score: 216 bits (549), Expect = 3.430e-61
Identity = 139/412 (33.74%), Postives = 200/412 (48.54%), Query Frame = 1
Query:  103 ANALLRACETHGLFFVVGHGITTSQRRLAFDNARRFFSLPEAEKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPTDQPPNNALQGPNIWPDSDS-LGEGWRDSMSALFRLMVSVNEAVARGLSFSLDLGLQDLPALCQGGDTISLLRLFHYFPYSNDAASNXXXXXXXXXXXXXXXXXXCKDDDDGSAKAVASTGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGSSPHTDWGLSTSILQ-DGAGGLQFLEQATQRWVDVPCAQEDALVFNCGDYLSLLSNGRLKSPVHQVVTTGV-ERTSFVFFYYPSFDAKLPVTAPRDASSSAGATRTNPAAAAVTATAAATEEQVAREPRETIGPYNTLLDLRNKQRGGDAXXXXXXXXDDASFGQYLARKWGDVFR 1329
            AN +  AC+  G+F+V         +   F+++R+FFSLPE +K  IP K GGFTRGYIG G ESGSH  E KEAFSYGY W  ++ P N+LQG N W +    LGE WR++++  +  MV+++E V + L  +L +   +L + C GG+TIS++RLF Y+PY+N+ ++                         GS K+                                   IGSSPHTDWG  T +LQ +   GLQ    +  +W D+P ++   +V NCGDYLSLL+ G+  SP+H+V++ G  ER S VFFYYP++++K+P+ A                                    +     +   D  +K    D          D  FG+Y+ RKW  VFR
Sbjct:   31 ANNIDVACKRFGVFYVTTSSFQLHDQNHIFESSRQFFSLPEEKKNTIPIKSGGFTRGYIGLGNESGSHRFEVKEAFSYGYEWDPNEQPTNSLQGRNEWGNLQKILGEQWRNTLNKYYDKMVAISELVVKSLEIALGV---ELKSHCVGGETISIMRLFKYYPYNNEISA-------------------------GSDKSE---------------------------------NIGSSPHTDWGFLTLVLQQENIQGLQLFYDS--QWWDIP-SKPATIVVNCGDYLSLLTRGQYISPLHRVISDGTNERYSTVFFYYPAYESKIPMIA------------------------------------QCSNELSIFKDQTDKSDTHDENDKEKLL--DVCFGEYITRKWDQVFR 340          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17728.1 vs. uniprot
Match: A0A2Z6QUS6_9GLOM (Fe2OG dioxygenase domain-containing protein n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QUS6_9GLOM)

HSP 1 Score: 214 bits (544), Expect = 2.230e-60
Identity = 145/441 (32.88%), Postives = 213/441 (48.30%), Query Frame = 1
Query:   22 VHIPTVNIASLLTTSGESFSEDDRAATANALLRACETHGLFFVVGHGITTSQRRLAFDNARRFFSLPEAEKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPTDQPP-NNALQGPNIWPDSDS-LGEGWRDSMSALFRLMVSVNEAVARGLSFSLDLGLQDLPALCQGGDTISLLRLFHYFPYSNDAASNXXXXXXXXXXXXXXXXXXCKDDDDGSAKAVASTGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGSSPHTDWGLSTSILQ-DGAGGLQFLEQATQRWVDVPCAQEDALVFNCGDYLSLLSNGRLKSPVHQVVTTGV-ERTSFVFFYYPSFDAKLPVTAPRDASSSAGATRTNPAAAAVTATAAATEEQVAREPRETIGPYNTLLDLRNKQRGGDAXXXXXXXXDDASFGQYLARKWGDVFRE 1332
            + +P +++++L T S    S+ D    AN +  AC  +G+F++    + T  + L  +  R+FFSLP   K  IP K GGFTRGYIG GGESGS + E KEAFSYGY W  ++    N+LQGPN W + ++ LG  WR +++  +  ++S++E V +GL  +L++   +L   C GG+TISLLRLF Y PY  +                      C+++                                          IGSSPHTDWG  T +LQ D + GLQ       +W DVP ++  ++V NCGDYLSL+++G+  SP+H+VV  G+ ER S V FYYPS+DAK P+             +               E  + ++        N    + +K+              D  FG+Y+A KW  VFR+
Sbjct:    9 ISLPVIDLSTLETPSP---SKADLNRIANEIQFACTKYGVFYITCSSLNTIDQELVKEACRQFFSLPSNIKSSIPIKSGGFTRGYIGMGGESGSQMLEVKEAFSYGYEWENNKTKFENSLQGPNEWGNLENILGREWRITLNQYYDKLISLSELVVKGLELALNI---ELKQHCVGGETISLLRLFKYLPYKEN------------------DNIKCENE-----------------------------------------KIGSSPHTDWGFLTLVLQLDNSQGLQLFYDG--QWWDVP-SKPSSIVVNCGDYLSLITHGKYISPLHRVVNDGINERYSTVLFYYPSYDAKFPLIDNNGKEEFDLGKK---------------ELSIFKDQASNCKESNAKAQMHDKK--------------DTCFGEYIAYKWDQVFRD 352          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17728.1 vs. uniprot
Match: W4G2V6_9STRA (Fe2OG dioxygenase domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G2V6_9STRA)

HSP 1 Score: 209 bits (533), Expect = 9.140e-59
Identity = 151/410 (36.83%), Postives = 180/410 (43.90%), Query Frame = 1
Query:  112 LLRACETHGLFFVVGHGITTSQRRLAFDNARRFFSLPEAEKRKI--PAKKGGFTRGYIGFGGESGS-HLRECKEAFSYGYPWPTDQPPNNALQGPNIWPDSDSLGEGWRDSMSALFRLMVSVNEAVARGLSFSLDLGLQDLPALCQGGDTISLLRLFHYFPYSNDAASNXXXXXXXXXXXXXXXXXXCKDDDDGSAKAVASTGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGSSPHTDWGLSTSILQDGAGGLQFLEQATQRWVDVPCAQEDALVFNCGDYLSLLSNGRLKSPVHQVVTTGVERTSFVFFYYPSFDAKLP-VTAPRDASSSAGATRTNPAAAAVTATAAATEEQVAREPRETIGPYNTLLDLRNKQRGGDAXXXXXXXXDDASFGQYLARKWGDVFR 1329
            L  A  T G  ++ GHGI T       D A  +F+LP+  K K   P+   GF RGYIG G ESGS    E KE FSYGY W    PP+N LQGPN+WP    L  G   ++ ALF  +V V+  V   LS +L        + C  GDTIS+LR FHYFPYS  + +                          S   + STG                              IGSSPHTDWG  T ILQD  GGLQ     +  W DVP      L  N GDYLSLL+ G  KSPVH+VV    ER S VFFYYP FDAK+P VT P                               R   + +  +NTLLD  ++              D A FG+Y+  KW DV R
Sbjct:   41 LHHAFSTFGCCYLKGHGIHTVDEERVMDAAHAYFALPQHVKDKYHRPSSSNGFVRGYIGLGAESGSSEYVEVKEGFSYGYEWDASIPPSNPLQGPNVWPAE--LASGHTQTLQALFTSLVDVSGLVCDALSIALHKPSSYFRSFCSQGDTISILRAFHYFPYSTFSRT--------------------------SCFHLFSTGQGDSNL------------------------IGSSPHTDWGFLTLILQDKVGGLQLFHDGS--WHDVPHIP-GTLFVNGGDYLSLLTEGLWKSPVHRVVNYD-ERMSLVFFYYPDFDAKIPPVTTPT------------------------------RHQEQNLDTFNTLLDNTHQPSS-----------DQAPFGEYIVSKWADVQR 353          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17728.1 vs. uniprot
Match: A0A067CF38_SAPPC (Fe2OG dioxygenase domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CF38_SAPPC)

HSP 1 Score: 208 bits (529), Expect = 1.730e-58
Identity = 145/418 (34.69%), Postives = 190/418 (45.45%), Query Frame = 1
Query:   88 DRAATANALLRACETHGLFFVVGHGITTSQRRLAFDNARRFFSLPEAEKR--KIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPTDQPPNNALQGPNIWPDSDSLGEGWRDSMSALFRLMVSVNEAVARGLSFSLDLGLQDLPALCQGGDTISLLRLFHYFPYSNDAASNXXXXXXXXXXXXXXXXXXCKDDDDGSAKAVASTGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGSSPHTDWGLSTSILQDGAGGLQFLEQATQRWVDVPCAQEDALVFNCGDYLSLLSNGRLKSPVHQVVT--TGVERTSFVFFYYPSFDAKLPVTAPRDASSSAGATRTNPAAAAVTATAAATEEQVAREPRETIGPYNTLLDLRNKQRGGDAXXXXXXXXDDASFGQYLARKWGDVFR 1329
            D A    AL  A  T G  ++ GHGI   + +     A   F +P A K+  + P+   GF RGYIG GGESGS L E KEAFSYGY WP D  P+N LQGPN+WP S +L    + ++ + F  + +V+  + R +S +L           + GDTIS++R FHYFPY                              D   +  + T                               +GSSPHTDWG  T ILQD  GGLQFL +    W+DVP      +V N GDYLSLL+ G+  SP+H+VV+  T  ER S VFFYYP +DA++P            AT+T  A  A+T+T                   NTL+D                  +  SFG+Y+A KW  V R
Sbjct:   10 DEATAVAALDDAFSTFGCCYIKGHGINLEKEKHVMKAAHEVFRMPSAAKKLCERPSLGNGFIRGYIGLGGESGSELIEVKEAFSYGYEWPKDVAPSNPLQGPNVWPPSSALDATHQRTLRSYFTDLANVSTTLTRHMSVALGQSESYFGDYAKAGDTISIMRAFHYFPY------------------------------DKLRRNASDTN-----------------------------FVGSSPHTDWGFLTLILQDPTGGLQFLHE--NEWIDVPYIP-GTIVVNGGDYLSLLTKGKWVSPIHRVVSENTSEERYSMVFFYYPDYDARIPKPQ--------SATKTAIAQEAITST------------------LNTLVD-------------GSLDLEKTSFGEYIASKWAHVQR 326          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17728.1 vs. uniprot
Match: A0A397TNI1_9GLOM (Fe2OG dioxygenase domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TNI1_9GLOM)

HSP 1 Score: 208 bits (529), Expect = 3.030e-58
Identity = 141/446 (31.61%), Postives = 213/446 (47.76%), Query Frame = 1
Query:    7 MASREVHIPTVNIASLLTTSGESFSEDDRAATANALLRACETHGLFFVVGHGITTSQRRLAFDNARRFFSLPEAEKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPTDQPP-NNALQGPNIWPDSDS-LGEGWRDSMSALFRLMVSVNEAVARGLSFSLDLGLQDLPALCQGGDTISLLRLFHYFPYSNDAASNXXXXXXXXXXXXXXXXXXCKDDDDGSAKAVASTGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGSSPHTDWGLSTSILQ-DGAGGLQFLEQATQRWVDVPCAQEDALVFNCGDYLSLLSNGRLKSPVHQVVTTGV-ERTSFVFFYYPSFDAKLPVTAPRDASSSAGATRTNPAAAAVTATAAATEEQVAREPRETIGPYNTLLDLRNKQRGGDAXXXXXXXXDDASFGQYLARKWGDVFRE 1332
            M+ + + +P ++++ L T S    S+++    ++ +  AC  +G+F++         +    +  R+FFSLP   K  IP K GGFTRGYIG GGESGS   E KEAFSYGY W  ++    N+LQGPN W + +  LG  W+ +++  +  M+S++E V RG+  +L++   +L   C GG+TISLLRLF YFPY                          K+ D+ + K                                    IGSSPHTDWG  T +LQ D + GLQ       +W D+P ++  +++ NCGDYLSL++ G+  SP+H+V+  G  ER S V FYYPS+DAK+P+   ++                        EE+     R +I     +          ++         +  FG+Y+A KW  VFR+
Sbjct:    1 MSYKPISLPVIDLSILETPS---TSKENLETISSEIHNACIKYGVFYITCSSFLNIDQERIKEACRQFFSLPSNAKTSIPIKSGGFTRGYIGIGGESGSQRLEVKEAFSYGYEWENNKAKYENSLQGPNEWGNLEKILGREWKITLNHYYNKMISLSELVVRGIELALNI---ELKQHCVGGETISLLRLFRYFPY--------------------------KETDNNNEK------------------------------------IGSSPHTDWGFLTLVLQLDNSQGLQLFHD--NQWWDIP-SKPASIIVNCGDYLSLITRGKYISPLHRVINDGTNERYSTVLFYYPSYDAKIPLIDNKE------------------------EEEFELNKRLSIFKDQAV-------HCNESNAKARMYDKNTCFGEYIAYKWDQVFRD 344          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17728.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFT2_9PHAE2.870e-23384.15Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
D7G0Y4_ECTSI2.030e-11490.63Putative oxidoreductase n=1 Tax=Ectocarpus silicul... [more]
A0A507EEJ9_9FUNG2.920e-7537.65Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A0L0HJP3_SPIPD1.060e-6835.33Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
L1JXA8_GUITC1.020e-6240.31Fe2OG dioxygenase domain-containing protein (Fragm... [more]
A0A8H4A5N3_GIGMA3.430e-6133.74Clavaminate synthase-like protein n=1 Tax=Gigaspor... [more]
A0A2Z6QUS6_9GLOM2.230e-6032.88Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
W4G2V6_9STRA9.140e-5936.83Fe2OG dioxygenase domain-containing protein n=6 Ta... [more]
A0A067CF38_SAPPC1.730e-5834.69Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
A0A397TNI1_9GLOM3.030e-5831.61Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig98contigE-siliculosus-1a_M_contig98:567229..573329 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1332
Model size1805
Exons8
Ec32 orthologEc-23_001840.1
Ec32 ortholog descriptionputative oxidoreductase
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.C
EggNOG OGsCOG3491@1,KOG0143@2759
EggNOG free text desc.Belongs to the iron ascorbate-dependent oxidoreductase family
Seed eggNOG ortholog2880.D7G0Y4
Seed ortholog evalue4.6e-95
Seed ortholog score355.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig98.17728.1prot_E-siliculosus-1a_M_contig98.17728.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig98 567235..572862 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936567.0446293-UTR-E-siliculosus-1a_M_contig98:567228..5672341622936567.0446293-UTR-E-siliculosus-1a_M_contig98:567228..567234Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig98 567229..567234 +
1696251134.4490526-UTR-E-siliculosus-1a_M_contig98:567228..5672341696251134.4490526-UTR-E-siliculosus-1a_M_contig98:567228..567234Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig98 567229..567234 +
1622936567.3269799-UTR-E-siliculosus-1a_M_contig98:572862..5733291622936567.3269799-UTR-E-siliculosus-1a_M_contig98:572862..573329Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig98 572863..573329 +
1696251134.5765755-UTR-E-siliculosus-1a_M_contig98:572862..5733291696251134.5765755-UTR-E-siliculosus-1a_M_contig98:572862..573329Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig98 572863..573329 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936567.0590155-CDS-E-siliculosus-1a_M_contig98:567234..5673081622936567.0590155-CDS-E-siliculosus-1a_M_contig98:567234..567308Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 567235..567308 +
1696251134.4607375-CDS-E-siliculosus-1a_M_contig98:567234..5673081696251134.4607375-CDS-E-siliculosus-1a_M_contig98:567234..567308Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 567235..567308 +
1622936567.0741072-CDS-E-siliculosus-1a_M_contig98:567587..5677101622936567.0741072-CDS-E-siliculosus-1a_M_contig98:567587..567710Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 567588..567710 +
1696251134.4706159-CDS-E-siliculosus-1a_M_contig98:567587..5677101696251134.4706159-CDS-E-siliculosus-1a_M_contig98:567587..567710Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 567588..567710 +
1622936567.096954-CDS-E-siliculosus-1a_M_contig98:568485..5686201622936567.096954-CDS-E-siliculosus-1a_M_contig98:568485..568620Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 568486..568620 +
1696251134.4845927-CDS-E-siliculosus-1a_M_contig98:568485..5686201696251134.4845927-CDS-E-siliculosus-1a_M_contig98:568485..568620Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 568486..568620 +
1622936567.1149437-CDS-E-siliculosus-1a_M_contig98:569288..5694021622936567.1149437-CDS-E-siliculosus-1a_M_contig98:569288..569402Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 569289..569402 +
1696251134.5030382-CDS-E-siliculosus-1a_M_contig98:569288..5694021696251134.5030382-CDS-E-siliculosus-1a_M_contig98:569288..569402Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 569289..569402 +
1622936567.131261-CDS-E-siliculosus-1a_M_contig98:569655..5700301622936567.131261-CDS-E-siliculosus-1a_M_contig98:569655..570030Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 569656..570030 +
1696251134.5125163-CDS-E-siliculosus-1a_M_contig98:569655..5700301696251134.5125163-CDS-E-siliculosus-1a_M_contig98:569655..570030Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 569656..570030 +
1622936567.1456163-CDS-E-siliculosus-1a_M_contig98:570744..5708131622936567.1456163-CDS-E-siliculosus-1a_M_contig98:570744..570813Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 570745..570813 +
1696251134.5318577-CDS-E-siliculosus-1a_M_contig98:570744..5708131696251134.5318577-CDS-E-siliculosus-1a_M_contig98:570744..570813Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 570745..570813 +
1622936567.184539-CDS-E-siliculosus-1a_M_contig98:572006..5720931622936567.184539-CDS-E-siliculosus-1a_M_contig98:572006..572093Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 572007..572093 +
1696251134.5451632-CDS-E-siliculosus-1a_M_contig98:572006..5720931696251134.5451632-CDS-E-siliculosus-1a_M_contig98:572006..572093Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 572007..572093 +
1622936567.209976-CDS-E-siliculosus-1a_M_contig98:572507..5728621622936567.209976-CDS-E-siliculosus-1a_M_contig98:572507..572862Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 572508..572862 +
1696251134.5576024-CDS-E-siliculosus-1a_M_contig98:572507..5728621696251134.5576024-CDS-E-siliculosus-1a_M_contig98:572507..572862Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 572508..572862 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig98.17728.1

>prot_E-siliculosus-1a_M_contig98.17728.1 ID=prot_E-siliculosus-1a_M_contig98.17728.1|Name=mRNA_E-siliculosus-1a_M_contig98.17728.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=444bp
MASREVHIPTVNIASLLTTSGESFSEDDRAATANALLRACETHGLFFVVG
HGITTSQRRLAFDNARRFFSLPEAEKRKIPAKKGGFTRGYIGFGGESGSH
LRECKEAFSYGYPWPTDQPPNNALQGPNIWPDSDSLGEGWRDSMSALFRL
MVSVNEAVARGLSFSLDLGLQDLPALCQGGDTISLLRLFHYFPYSNDAAS
NSNSNSGGSGGGSGTGSGNCKDDDDGSAKAVASTGPGTGGESCGNDDTGN
SGGSSGSREGSGAGNIGSSPHTDWGLSTSILQDGAGGLQFLEQATQRWVD
VPCAQEDALVFNCGDYLSLLSNGRLKSPVHQVVTTGVERTSFVFFYYPSF
DAKLPVTAPRDASSSAGATRTNPAAAAVTATAAATEEQVAREPRETIGPY
NTLLDLRNKQRGGDAAAAAAADEDDASFGQYLARKWGDVFREK*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig98:567229..573329+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig98.17728.1 ID=mRNA_E-siliculosus-1a_M_contig98.17728.1|Name=mRNA_E-siliculosus-1a_M_contig98.17728.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6101bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:567229..573329+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GAAAGGATGGCGAGTAGAGAGGTGCACATACCCACGGTCAATATCGCGTC ACTGCTGACCACCAGTGGTGAATCGTTCAGGTGATGAAATGGCAGTAGTA ACACGTTAGATTCAGCTGAGCAGTACATGCACCCTCGTCGACATGATGCC GCCACAGCAGCAGAGTAAACCGAGACTTCACACCGCGTACTGGCATGGCA ACACGTGACGAGACTAGACCAGATTCAAGAGCTCGTGTTGTGCCATGGGT CAAGCCTTGACGTGGAGAGGGGCGCTGTGCATCTTGATCAAGGCCATCCA TGCCTCTCCGGCCTCGCTAATAAAACTGCATTTTGCGTACCTATCGCATC TTTCCGCAGCGAGGACGATCGAGCGGCCACCGCGAACGCCTTGCTGCGAG CTTGTGAGACCCACGGGTTGTTCTTTGTCGTAGGCCACGGCATCACGACA TCTCAGAGGCGCCTAGCGTTCGACAACGCCAGGCAAGTGATTGGAGTTTG TGACCGGGACTTCAACTGCAACTTTGTCCGAGGGGTTGCGGCCCAATCTC CCCGCAGTCCGTTGGTCCGTGCTCCCAGTTCCCCGTTCCCAGATCCCAAG TCCCAAATATTTGTGTTGCCTGTGCAAAGAATAAGAATTATTCGAATTAT TCGAGAAGACCCGAGAAAGAGTCAGCTTGTGTGTACCTGGTAGTACATAA TGCACATGCCGGGAATAGCAGTGTGGACCAGCCCCCACCACAGGTGATTG GAACCTACACGGCCGACACCTGAGGCCGACAATACTCGAAGTTAGAGAAC TACCGGGGACTAATGGAAACTTATCTTACATTCTTCATCTATAGGCTAAC CCGCTGTTGACGACAATCGCCATCATGCCATTCTTCGTCACATCTGCGCT GTTGTAGACGGCAATCGCCATCATGCCACGCTATGTATGGGGACACTCTG ATGAGTTGTGTTCGTGCGACACTCTTGCGTACCCGTGGGCGACACGAAAT TGCGGGCCAACCACAACTGCTGGGTTTTTCTTTTCTTTTCGACGCACGAC CGAGGGATCTACCAATAGTAGTTCATCATACTGCTGTGTCAACTTGGCCC ACTACTTCTATAGAGGATCTCATTTACGCATCATCAACGGCATTTGCGCG ATATCGTGCGCGCCCTCGATTTTTCGCATCGCCCACTCGTTTTCGGCTGT GTGACGCGCGCTCGCGGGCCGCGCGACTTTCTCCGACCAACCACTGCTGT AAATCAGGCGATTTTTTTCCCTTCCGGAAGCGGAGAAACGGAAAATCCCC GCAAAGAAGGGCGGCTTCACGCGAGGCTACATCGGATTCGGCGGGGAGAG TGGTTCGCACCTTCGAGAGTGCAAGGAGGCTTTCAGCTACGGGTGAGGCA ACGAGCTTGACACTGCTGCTGCTGCTGCTGCTGCTGCTGTTTGTATGTTG CGATAGGTTCTGGTGGTACCACCCGCGGGGCTGCAAATCTCCGCGCGTTA TGTATGTTTTACCACTTGAATTCTTCCTGCTCTTCATTGCTGCTCTCCTC CAGCGACCGATATCGTTTTCTGAGGCTGTTTTTTTTTTGGCGCGTACCGG CCTCCCGCGGCGACGCTGCGGCTGTCACTCTTGTCCATGGGCCCAACGAT GGTCTCGTCAGGATTCAAAGAGGGGCAAACGCATGCACGAATGCTACGCA TGGTTCGTTGCACGGCGTTCCGCGAATGTTTTTCGACACCTGCGTTGGGC CGGTGCTACAGCCCTACCACCCTCCTCTTGGAAGGCCGGCCTTCTAGCGC GATTGCTCGTAGGCGTTCCCCTGTCTGCTTTACCGTTTTCGCTATATAGC CCATGGTCAAAATGGCAAGATATTTTTCCCCACGAAGGCGCCCGCGTCAG TTGGACCGGTACGGATACTAGAAGGTACTGGGCGGAGACGGGAAGGTTTT TTTTTATGTGGAGACAACAACAACATCAACATCAACAACAATAAACAGTG GTGGTCGTTCCTTTTGTGTCCCCCTTCAAGATCTGATATGTTCTCCGTTT TCCCCCGCAGGTATCCTTGGCCCACCGACCAGCCGCCGAACAACGCTCTC CAGGGCCCCAACATATGGCCCGACAGCGACTCCCTCGGGGAAGGCTGGCG AGATAGCATGTCGGCGCTGTTCAGGTGTGAGTTAAGGGCAGGTGTGAGTT AAGGGCACTGGAATTCAGCGAGTACTTTTGAGCAACAACAATCCTCTTTT GTTGTTTTTTGGGCAATTCTTGAACAGTACGCAGCAGTCAGTCCCTCACG GGAAGTAGCTTTTGGAGCAAAGGCGGTGGGTGCCCGGGGGAATTGGAGAT ATTCCAAAAAACCAGTCGGCTTCATCGGTCAGTGATCTCCCTTTCAACGG CCGCATTGTTTGTGACCGGCCCCACAGGCTGATGGTGTCGGTGAACGAGG CCGTTGCGAGGGGTCTCTCGTTCTCCCTAGACCTCGGCCTGCAGGACCTC CCGGCCCTTTGCCAGGGGGGGGACACGATCAGCCTCTTGAGGCTCTTTCA CTACTTTCCCTACAGCAACGACGCTGCCAGCAACAGCAACAGCAACAGCG GTGGCAGCGGTGGCGGCAGCGGTACCGGAAGCGGCAATTGCAAGGACGAC GACGACGGCAGCGCCAAGGCCGTCGCCAGCACAGGCCCCGGCACCGGCGG CGAAAGCTGTGGCAACGACGACACTGGCAACAGCGGCGGCAGCAGCGGCA GCCGAGAAGGAAGTGGTGCGGGAAACATTGGGTCCAGCCCGCACACCGAC TGGTACGGCGTGTCAAACGTGTGTGCACTGAAGTTCCTCTTTTTTTTTTG GTGCCCCCCGCGTATGTTCATGTCACACCTGCCATGTTCGTCCGTAGTAC TTCTTTAGGTGCTCGGGGTCGTGGCTATGCTTTGGGTCGCAGGCTATACC CCCACTGATTTCGGTGCCAATTCCATACGTGTATCTTCTGAACATGCACT TGTATGAGAGTGCTGCAAAAGGGTGCTGGGAAATAGGCAATAGCGTAACT GCTGTGTTGCACCTTGCCGCCGTCCTTGACCCGTCTGGGCGCTGGGCTAG CCCTTGCTTCTGTCATTGAAGAAACCACACGGCTACGATATCTCTCACGT CACAAAACAAGAGCGTGTCTCGCCCGCCCCGCAGAATCATCATTTCGGTC TACGCGTTGGTGGCACGCCTTTCGATTCCGCGTCCCCCACTCTTGCTTTC AATGGCTACGGCATGAAGGGCACTTTTTAGCGCCCCATTCTTCTCATGTG TTTCCCATCCAGTCGTGGTCCCGGTATAGCGCGGTGCATAGTGTCAACAA ATGTTACAACCGCTATTGAGGGCATCGCCGCTAAATCGGATTGGCAATAT TATAGTAGCTTGACTGCCGAGGTGCTTCCGTGCCACGAGATATTGGAATC CCTATTGAGGGCATCCCGCTAAACAAGGAACCGCTATACCGGGACCACGA CTGTATGCGCTCGCAGGGGTTTGTCGACAAGCATTCTCCAGGACGGGGCT GGAGGCCTTCAGTTCCTGGAGCAAGCGACTCAAAGGTGGGGAGAATGGTT GGCCGCGGTAGCAGTCCGCATGTTCCACCGCGCGGGCTTTCTCCGCGTTT GCTTACCGGAAGAGATGACACCCCCCCCCGCTAGACCGACTTTAAAAGCA CGATTCCTAGACGAGGAATGGGTGCGGATTGAGCCATACACGAAAAGCCT TCTGCGAGATTTGTCGAAACCCGCCCTCCTTTATCTGTTGTCGTTGGCAC ACACAACCTTGGTTGTGGACCCAATCGGGCCTTGAAAAATCGGTCCAGGG GGGGTGTCATCTCTCCGCCTTTTCCCGTACTTTCTTCCGGCGGAACCTCG CACCCTGTGTTGCGACTCACTGGTGGCCAGAGGGGCAGGTTGGGCACGAA CTACAACCTGGGGGGGGGGAGGTTGGGAGGCCGAGTTCGACCTTGAACCC ATTTTTTCTTCAGGCTTGCAGCCCGCCGTGTTGATTGCAACAACGCCGCT ATCCAAGATGCGGGGTAACTTGCACACTTTGCTCCCCCCCCAGGATGTAT AATAGTTGGTGCCCCAACCTACGCACATCCTGCCTCTGGCCACCTGTGCT GGCGCGACGGTCGACGTATTTCTTCTCGGACTGGGCTTGTGGCACAACCA GGGAACATTGTCGACAGCACCCAAGTGGACTGTAGCACACCAAGGACCTG TTCCTCGGCAGTTACCTGGGTTCTGTAGGTGTTACTATTGCTTATCACAC CTTTATTGTTGTACCACCGCGCTGGAGCGGAGTGACGGGAAGTTTTGGTG ATGGGCAGAACTACTTTGACACACAGCCCAGCAGTGTCGCTTCTGTTTGT CGTTACCACTGTTGGGCTCGATCCGTGAATTGTGTCCAACACGTGGGGTC CTCTGCGGGGCCGCTTTCTTGACGACTGGCCGTTGTTCGAAGCACTCGTG ACACCGAGCTTTGTCGAAATACCCTGTGAACCACCGGGGTGAAAGGTTTT CCCGAAGCCTATCGGCACAAGCAAGGTGTTGGTTTTATCGAATAGAAAAC GAGCGGTATGTTTGCGATTTTTCGACTGCTTTGTCGGATGACTGCAGTTC CGAAGGCGACGAATGCAAGCAGATATTGGTCTAATAGCATTAATAGAAAA CAGGTGGTGACCCCGACCTACCCATAGGGGTACCTTTCTTTTTGACGCCT CGTGTGCCACTGTTTTTCTTTGTTACAGGTGGGTGGACGTCCCTTGCGCC CAGGAAGACGCGCTGGTGTTCAACTGTGGCGACTACCTTTCGCTTCTGAG CAACGGCCGCTTGAAGTGAGTCTGGTGATTTTAGGCGGTACAGTAGCATC GACTATTGCCGGCAAAAAGCTTCGATCCACTTGTAGTTTTTTCAGAATAG TTCCTGTGCCAGAGAGTTTATCCTGAAACTGGAACCGGAACCAGCAACCA GACATCGGGGCCGTTTTAAAAAAGGCGCGCGGTCTGTTGGTTATTGGTAC GCTCGCTTTTTGAACCACACCGATGTCAATACACTGTGCACGAAGGCAAA ATGTACTAGTGTTTTTTTGCTGTGTTGTGCCGATATCATGAGGAGCACCG TGGTTAATTCGTTTTGAGTTCGGTGCCGGCGGAACTTGTGCAACCTCTCG CTCTAATAAGCTCGACATGACATTCTCACCGCACGTATTTCCCCCTCTTA TATCGACACCGGGGACGCGTGTGGGCCAGGTCTCCGGTGCACCAGGTTGT GACGACCGGCGTCGAGCGGACATCGTTCGTGTTCTTCTATTACCCCAGCT TCGACGCCAAGCTACCCGTCACCGCTCCGCGCGACGCGAGTTCCAGCGCA GGAGCAACCCGAACAAACCCGGCAGCGGCGGCGGTTACGGCGACAGCGGC AGCCACGGAGGAGCAGGTCGCGCGCGAGCCGCGGGAGACGATCGGGCCGT ACAACACCTTGCTGGACCTCCGCAACAAGCAGCGGGGTGGTGACGCTGCA GCAGCAGCAGCCGCAGATGAGGACGATGCATCCTTCGGGCAGTACCTCGC CAGAAAATGGGGAGATGTCTTCCGAGAAAAATAAGCTCTACAGAAGAAAC AAACAAACTCCAAGTTTTACCATCAAAGGGTGTCTCAGCCTTGGGAGTAT TCCGAGAGACGAGCGTCAGTAGATTGCCGTGGGCCACGGCCGCTTCCATA GTTGAATCTAATCTTCTCGCCGAGAGGGGAGCAGAAACCCCGATAGCATG TTTCGCGTAAGTTGCCTAGTTCGAGCTAGCGCTCGTCTATTTGCGCGGCC TTTTCAGAGCTTGCGTGTGCCGCCTGAAGAAAAAGGCCACCCTACTGATT AGGAGATGGGTTGGTTCGACGTTGTCCAGAGCAAGGAAAGAATCGCGGTG AAATGGGTGCCTGCCTCCGCGTAACTAAGTTGAGCGCCCGCTCTCGCGGC GACGGGTCTAGTAGGTACCACACCCGATGCTCCTTTCGCTAAGCCTACAC GTTCAATATTAGAGGGATTGTACAGGTCCACACCGACAAGGTATTGCCAC A
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig98:567229..573329+

>mRNA_E-siliculosus-1a_M_contig98.17728.1 ID=mRNA_E-siliculosus-1a_M_contig98.17728.1|Name=mRNA_E-siliculosus-1a_M_contig98.17728.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2664bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:567229..573329+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCGAGTAGAGAGGTGCACATACCCACGGTCAATATCGCGTCACTGCT
GACCACCAGTGGTGAATCGTTCAGATGGCGAGTAGAGAGGTGCACATACC
CACGGTCAATATCGCGTCACTGCTGACCACCAGTGGTGAATCGTTCAGCG
AGGACGATCGAGCGGCCACCGCGAACGCCTTGCTGCGAGCTTGTGAGACC
CACGGGTTGTTCTTTGTCGTAGGCCACGGCATCACGACATCTCAGAGGCG
CCTAGCGTTCGACAACGCCAGCGAGGACGATCGAGCGGCCACCGCGAACG
CCTTGCTGCGAGCTTGTGAGACCCACGGGTTGTTCTTTGTCGTAGGCCAC
GGCATCACGACATCTCAGAGGCGCCTAGCGTTCGACAACGCCAGGCGATT
TTTTTCCCTTCCGGAAGCGGAGAAACGGAAAATCCCCGCAAAGAAGGGCG
GCTTCACGCGAGGCTACATCGGATTCGGCGGGGAGAGTGGTTCGCACCTT
CGAGAGTGCAAGGAGGCTTTCAGCTACGGGCGATTTTTTTCCCTTCCGGA
AGCGGAGAAACGGAAAATCCCCGCAAAGAAGGGCGGCTTCACGCGAGGCT
ACATCGGATTCGGCGGGGAGAGTGGTTCGCACCTTCGAGAGTGCAAGGAG
GCTTTCAGCTACGGGTATCCTTGGCCCACCGACCAGCCGCCGAACAACGC
TCTCCAGGGCCCCAACATATGGCCCGACAGCGACTCCCTCGGGGAAGGCT
GGCGAGATAGCATGTCGGCGCTGTTCAGGTATCCTTGGCCCACCGACCAG
CCGCCGAACAACGCTCTCCAGGGCCCCAACATATGGCCCGACAGCGACTC
CCTCGGGGAAGGCTGGCGAGATAGCATGTCGGCGCTGTTCAGGCTGATGG
TGTCGGTGAACGAGGCCGTTGCGAGGGGTCTCTCGTTCTCCCTAGACCTC
GGCCTGCAGGACCTCCCGGCCCTTTGCCAGGGGGGGGACACGATCAGCCT
CTTGAGGCTCTTTCACTACTTTCCCTACAGCAACGACGCTGCCAGCAACA
GCAACAGCAACAGCGGTGGCAGCGGTGGCGGCAGCGGTACCGGAAGCGGC
AATTGCAAGGACGACGACGACGGCAGCGCCAAGGCCGTCGCCAGCACAGG
CCCCGGCACCGGCGGCGAAAGCTGTGGCAACGACGACACTGGCAACAGCG
GCGGCAGCAGCGGCAGCCGAGAAGGAAGTGGTGCGGGAAACATTGGGTCC
AGCCCGCACACCGACTGGCTGATGGTGTCGGTGAACGAGGCCGTTGCGAG
GGGTCTCTCGTTCTCCCTAGACCTCGGCCTGCAGGACCTCCCGGCCCTTT
GCCAGGGGGGGGACACGATCAGCCTCTTGAGGCTCTTTCACTACTTTCCC
TACAGCAACGACGCTGCCAGCAACAGCAACAGCAACAGCGGTGGCAGCGG
TGGCGGCAGCGGTACCGGAAGCGGCAATTGCAAGGACGACGACGACGGCA
GCGCCAAGGCCGTCGCCAGCACAGGCCCCGGCACCGGCGGCGAAAGCTGT
GGCAACGACGACACTGGCAACAGCGGCGGCAGCAGCGGCAGCCGAGAAGG
AAGTGGTGCGGGAAACATTGGGTCCAGCCCGCACACCGACTGGGGTTTGT
CGACAAGCATTCTCCAGGACGGGGCTGGAGGCCTTCAGTTCCTGGAGCAA
GCGACTCAAAGGGGTTTGTCGACAAGCATTCTCCAGGACGGGGCTGGAGG
CCTTCAGTTCCTGGAGCAAGCGACTCAAAGGTGGGTGGACGTCCCTTGCG
CCCAGGAAGACGCGCTGGTGTTCAACTGTGGCGACTACCTTTCGCTTCTG
AGCAACGGCCGCTTGAAGTGGGTGGACGTCCCTTGCGCCCAGGAAGACGC
GCTGGTGTTCAACTGTGGCGACTACCTTTCGCTTCTGAGCAACGGCCGCT
TGAAGTCTCCGGTGCACCAGGTTGTGACGACCGGCGTCGAGCGGACATCG
TTCGTGTTCTTCTATTACCCCAGCTTCGACGCCAAGCTACCCGTCACCGC
TCCGCGCGACGCGAGTTCCAGCGCAGGAGCAACCCGAACAAACCCGGCAG
CGGCGGCGGTTACGGCGACAGCGGCAGCCACGGAGGAGCAGGTCGCGCGC
GAGCCGCGGGAGACGATCGGGCCGTACAACACCTTGCTGGACCTCCGCAA
CAAGCAGCGGGGTGGTGACGCTGCAGCAGCAGCAGCCGCAGATGAGGACG
ATGCATCCTTCGGGCAGTACCTCGCCAGAAAATGGGGAGATGTCTTCCGA
GAAAAATAAGTCTCCGGTGCACCAGGTTGTGACGACCGGCGTCGAGCGGA
CATCGTTCGTGTTCTTCTATTACCCCAGCTTCGACGCCAAGCTACCCGTC
ACCGCTCCGCGCGACGCGAGTTCCAGCGCAGGAGCAACCCGAACAAACCC
GGCAGCGGCGGCGGTTACGGCGACAGCGGCAGCCACGGAGGAGCAGGTCG
CGCGCGAGCCGCGGGAGACGATCGGGCCGTACAACACCTTGCTGGACCTC
CGCAACAAGCAGCGGGGTGGTGACGCTGCAGCAGCAGCAGCCGCAGATGA
GGACGATGCATCCTTCGGGCAGTACCTCGCCAGAAAATGGGGAGATGTCT
TCCGAGAAAAATAA
back to top