mRNA_E-siliculosus-1a_M_contig98.17710.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig98.17710.1 vs. uniprot
Match: D7G0W8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0W8_ECTSI) HSP 1 Score: 444 bits (1141), Expect = 3.560e-148 Identity = 229/232 (98.71%), Postives = 230/232 (99.14%), Query Frame = 3 Query: 213 MSTIEPKAVRSRSKSPTRSPLARTASKTNLVIDTQAGHDAADKGEPLISPARFSPITAGKRLLKPSSPRKITMRPVVKEESMLSRYFSQSLPAKLSAVLSVVAIAVAAALFFGEGDGPKLVKRDAPLFPGDRLKGGQYISFCTSIIATGCKPKYFELGRDGSLGVYGGKSPYAQKAKLWTAGTGAKGVGGKEALYELVYSGDRVVLNKDGKVKWSSSVKSLPKNMRPWPLAQ 908
MSTIEPKAVRSRSKSPTRSPLARTASKTNLVIDTQAGHDAADKGEPLISPARFSPITAGKRLLKPSSPRKITMRPVVKEESMLSRYFSQSLPAKLSAVLSVVAIAVAAALFFGEGDGPKLVKRDAPLFPGDRLKGGQYISFCTSIIATGCKPKYFELGRDGSLGVYGGKSPYAQKAKLWTAGTGAKG GGKEA YELVY+GDRVVLNKDGKVKWSSSVKSLPKNMRPWPLAQ
Sbjct: 1 MSTIEPKAVRSRSKSPTRSPLARTASKTNLVIDTQAGHDAADKGEPLISPARFSPITAGKRLLKPSSPRKITMRPVVKEESMLSRYFSQSLPAKLSAVLSVVAIAVAAALFFGEGDGPKLVKRDAPLFPGDRLKGGQYISFCTSIIATGCKPKYFELGRDGSLGVYGGKSPYAQKAKLWTAGTGAKGGGGKEAFYELVYTGDRVVLNKDGKVKWSSSVKSLPKNMRPWPLAQ 232 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig98.17710.1 >prot_E-siliculosus-1a_M_contig98.17710.1 ID=prot_E-siliculosus-1a_M_contig98.17710.1|Name=mRNA_E-siliculosus-1a_M_contig98.17710.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=233bp MSTIEPKAVRSRSKSPTRSPLARTASKTNLVIDTQAGHDAADKGEPLISPback to top mRNA from alignment at E-siliculosus-1a_M_contig98:298781..305636+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig98.17710.1 ID=mRNA_E-siliculosus-1a_M_contig98.17710.1|Name=mRNA_E-siliculosus-1a_M_contig98.17710.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6856bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:298781..305636+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig98:298781..305636+ >mRNA_E-siliculosus-1a_M_contig98.17710.1 ID=mRNA_E-siliculosus-1a_M_contig98.17710.1|Name=mRNA_E-siliculosus-1a_M_contig98.17710.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1398bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:298781..305636+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |