mRNA_E-siliculosus-1a_M_contig98.17708.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig98.17708.1
Unique NamemRNA_E-siliculosus-1a_M_contig98.17708.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig98.17708.1 vs. uniprot
Match: A0A6H5KFP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP0_9PHAE)

HSP 1 Score: 649 bits (1673), Expect = 8.350e-229
Identity = 350/427 (81.97%), Postives = 355/427 (83.14%), Query Frame = 2
Query:   11 DTGKPCMCARIAAQQRQRASAARRLRQAEDERRLESLVAGRTAMMIRPLDLSVNNHLQQLRASVDASWSSFSTAWDARRARGSGSGSSEGGALLSDAKATXXXXXXXXXPAAGFVMPPCTHRGAPPAGSGRGRGHTAVEEGERTAAAEAECPECAAIAAAHVLAGAGAATTVGRLQQQ-------QGRGTDVVDVWAGSSLGVLNADALHRALTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWDPKSSAVTQGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKSLDSLAPGCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACMLSSTAQRIRKGRALARREAKA 1270
            DTGKPCMCARIAAQQRQRASAARRLRQAEDERRLESLVAGRTAMMIRPLDLS NNHLQQLRASVDASWSSFSTAWDARRARGSGSGS++GG  L               PAAGFVMPPCTHRGAPPAGSGRGRGHTAVE+GERT AAEAECPECAAIAAAHVLAGAGA                 QGRGTDVVDVWAGSSLGVLNADAL RALTFL+PRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDW+PKSSAVTQGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKSLDSLAPGCAA                                   ACMLSSTAQRIRKGRALARREAKA
Sbjct:  148 DTGKPCMCARIAAQQRQRASAARRLRQAEDERRLESLVAGRTAMMIRPLDLSANNHLQQLRASVDASWSSFSTAWDARRARGSGSGSTDGGGPLP--------------PAAGFVMPPCTHRGAPPAGSGRGRGHTAVEQGERTLAAEAECPECAAIAAAHVLAGAGAXXXXXXXXXXXXXXXXXQGRGTDVVDVWAGSSLGVLNADALQRALTFLEPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKSLDSLAPGCAAAGADAGGGGSKWRGSSASGARGNVSGG--------ACMLSSTAQRIRKGRALARREAKA 552          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17708.1 vs. uniprot
Match: D7FI17_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI17_ECTSI)

HSP 1 Score: 464 bits (1193), Expect = 1.440e-160
Identity = 259/302 (85.76%), Postives = 266/302 (88.08%), Query Frame = 2
Query:   29 MCARIAAQQRQRASAARRLRQAEDERRLESLVAGRTAMMIRPLDLSVNNHLQQLRASVDASWSSFSTAWDARRARGSGSGSSEGGALLSDAKATXXXXXXXXXPAAGFVMPPCTHRGAPPA-GSGRGRGHTAVEEGERTAAAEAECPECAAIAAAHVLAGAGAATTVGRLQQQQGRGTDVVDVWAGSSLGVLNADALHRALTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWDPKSSAVTQGWREFFFE-FEATWLEWLAAGQNFES----SCLVG 916
            MCARIA QQRQRASAARRLRQAEDERRLE LVAGRTAMMIRPLDLSVNNHLQQLRASVDASWSSFSTAWDARRARGSGSGS+EGG L SDAKAT         PAAGFVMPPCTHRGAPPA GSGRGR HTAVEEGERTAAAEAECPECAAIAAAHVLAGAGAATT GRLQQQQGRGTDV DVWAGSSLGVLNADALHR+LTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDW+PKSSAVTQ  R F      ATW  W A G+ + S    +C+VG
Sbjct:    1 MCARIAEQQRQRASAARRLRQAEDERRLERLVAGRTAMMIRPLDLSVNNHLQQLRASVDASWSSFSTAWDARRARGSGSGSTEGGGLHSDAKATAAPPLP---PAAGFVMPPCTHRGAPPAAGSGRGRRHTAVEEGERTAAAEAECPECAAIAAAHVLAGAGAATTGGRLQQQQGRGTDVFDVWAGSSLGVLNADALHRSLTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQ--RSFILRCVGATWSCW-AGGKCWVSMLLIACVVG 296          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17708.1 vs. uniprot
Match: A0A835Z6K8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6K8_9STRA)

HSP 1 Score: 156 bits (395), Expect = 3.230e-39
Identity = 70/143 (48.95%), Postives = 97/143 (67.83%), Query Frame = 2
Query:  584 SSLGVLNADALHRALTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWDPKSSAVTQGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASE 1012
            S L +L  D   R L  LQP DL ELAQAS+G + AAD++ +W  +W  RFG +W S+  + AA RWH H WDP   A  QGW+ FF +F  +W+ W AAG N E  C++G++G LY++TDF+  HPGSP+TL+++AG DA++
Sbjct:   98 SFLPLLPDDLRLRCLALLQPEDLFELAQASKGCQAAADAEPLWAGLWQYRFGRVWASQPLQDAAERWHCH-WDPLRHAPLQGWKLFFSQFALSWIGWAAAGSNTEERCILGINGALYNVTDFLMEHPGSPDTLLDSAGCDATQ 239          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17708.1 vs. uniprot
Match: A0A7S2FKK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKK9_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.130e-38
Identity = 77/175 (44.00%), Postives = 101/175 (57.71%), Query Frame = 2
Query:  569 DVWAGSSLGVLNADALHRALTFLQPRDLLELAQASRGAREAADS------QLVWREVWWARFGAIWESEICKKAARRWHLHDWDPKSSAVTQGWREFFFEFEATWLEWLAAGQNFES---SCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKSL 1066
            DV +  +LG L  + +     FL    L  +A   +      DS      +  W+  W  RFGA WES + + AA R H H WDP        WR FFFE+E +WLEW  AGQN E+    CL+GV+G +YD++ F+  HPG+PET+++NAG D +EFFEDVGHS  AR  MKSL
Sbjct:  199 DVVSDLTLGCLPVETVLLTFDFLDLASLFSIAAVDQALNSLCDSTDTAFNECAWKSQWLRRFGAHWESSLMQAAAERHHSH-WDPSQPPPGGSWRRFFFEYEESWLEWSCAGQNVENVNQGCLIGVYGTVYDVSFFLDEHPGTPETILDNAGGDTTEFFEDVGHSTSARRRMKSL 372          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17708.1 vs. uniprot
Match: A0A7S3Y614_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y614_HETAK)

HSP 1 Score: 148 bits (374), Expect = 6.380e-37
Identity = 70/156 (44.87%), Postives = 101/156 (64.74%), Query Frame = 2
Query:  599 LNADALHRALTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWDP-KSSAVTQGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKS 1063
            ++ + L    +FLQP DL+ L Q  +G  ++  + LVW++ W  RFG +  +   KK    W +  W+       +QGW+ FFFEFEA+W+  +AAG +  SSCL+G+ G LYDIT+F+  HPGSPETL+ENAG D ++FF +VGHS  AR LM++
Sbjct:   91 MHQNQLIHVSSFLQPEDLVRLGQTCKGGNKSCQTDLVWKKQWENRFGKLIVTNAWKKCLEFWDI-SWEVFVRKPPSQGWKRFFFEFEASWINMVAAGHDTLSSCLIGIEGGLYDITNFIDLHPGSPETLLENAGRDVTQFFNEVGHSATARRLMRN 245          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17708.1 vs. uniprot
Match: W7TKW6_9STRA (Cytochrome b5 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKW6_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.800e-33
Identity = 70/155 (45.16%), Postives = 90/155 (58.06%), Query Frame = 2
Query:  632 FLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWDPKSSAVTQG-----WREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKSLDSLAP 1081
            +LQPRD+L L   SR AR   + + VWR  W ARFG IW S   +KA         D + ++ T G     WR F+  FE  W  WL AG+N E SC VG+ G +YD+T F+  HPGS ET++ NAG DA+ FF+DVGHS  AR +M     + P
Sbjct:  316 YLQPRDVLRLTPVSRAARRLGEGEQVWRTKWAARFGPIWRSAPVQKAEMARKARRADGQRASATDGEMEGGWRHFYSVFELEWAAWLCAGRNREDSCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHSAQARAMMADFCIVPP 470          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17708.1 vs. uniprot
Match: A0A7S3Y620_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y620_HETAK)

HSP 1 Score: 132 bits (331), Expect = 2.590e-31
Identity = 61/131 (46.56%), Postives = 87/131 (66.41%), Query Frame = 2
Query:  674 RGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWDP-KSSAVTQGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKS 1063
            +G  ++  + LVW++ W  RFG +  +   KK    W +  W+       +QGW+ FFFEFEA+W+  +AAG +  SSCL+G+ G LYDIT+F+  HPGSPETL+ENAG D ++FF +VGHS  AR LM++
Sbjct:   57 KGGNKSCQTDLVWKKQWENRFGKLIVTNAWKKCLEFWDI-SWEVFVRKPPSQGWKRFFFEFEASWINMVAAGHDTLSSCLIGIEGGLYDITNFIDLHPGSPETLLENAGRDVTQFFNEVGHSATARRLMRN 186          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17708.1 vs. uniprot
Match: A0A7S2B084_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B084_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.450e-28
Identity = 58/145 (40.00%), Postives = 84/145 (57.93%), Query Frame = 2
Query:  590 LGVLNADALHRALTFLQPRDLLELAQASRGAREAADSQ------LVWREVWWARFGAIWESEICKKAARRWHLHDWDPKSS---AVTQGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAG 997
            L +L  D +   + F+  R +L LA          D+        VWR+ W ARFG+IW S++  +A +R   + WDPK     A  +GW+ FFFEF  TW+ W  A QN    CL+G+HG +Y++TDF+  HPGSP+T+++NAG
Sbjct:   18 LSLLGTDTVMLLIEFVDLRAVLSLAGTCSFLSHLCDNNETRHCNCVWRQRWTARFGSIWTSDLVSQAVKR-DGNAWDPKGGCPPAGCKGWKAFFFEFNETWINWTLAMQNTTECCLIGLHGGVYNMTDFLEVHPGSPDTILDNAG 161          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17708.1 vs. uniprot
Match: A0A7S2SV73_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV73_9STRA)

HSP 1 Score: 124 bits (310), Expect = 3.730e-27
Identity = 80/218 (36.70%), Postives = 102/218 (46.79%), Query Frame = 2
Query:  503 GAGAATTVGRLQQQQGRGTDVVDVWAGSS-----LGVLNADALHRALTFLQPRDLLELAQASRGAREAADSQ----LVWREVWWARFGAIWESEICKKAARRWHLHDWDPK--------------SSAVTQG--WREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKSLDSLAP 1081
            GAGA T V     +QG  +  V  +   S     L  L  D     L FL    LL +A  SR A +  DS       WR+ W  RFG +W +   + A +R H   W P               S     G  WR FF+EF+  W++W   G N  + CLV +HG +YD+T F   HPGS ETL++NAG DA+  FE VGHS  AR  M  L  + P
Sbjct:  184 GAGAETPVLASHHRQGSKSPKVQAFGAGSGTRLWLDKLPHDGSLHVLGFLDRMSLLPVALTSRLAAQLCDSPHFEGCAWRDRWLRRFGHLWSTREIQAALQR-HGVSWFPSTGLHEAEARNGPAGSFGAPNGLSWRRFFYEFDEAWMDWALVGMNTPARCLVALHGTIYDLTQFKQEHPGSVETLLDNAGGDATPMFEGVGHSRVARRQMAQLVRIEP 400          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17708.1 vs. uniprot
Match: A0A482SPR7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SPR7_9ARCH)

HSP 1 Score: 119 bits (299), Expect = 2.830e-26
Identity = 55/158 (34.81%), Postives = 88/158 (55.70%), Query Frame = 2
Query:  587 SLGVLNADALHRALTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWDPKSS--AVTQGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGL 1054
            SL  L+++ L   L++L   +++ ++  S   RE   S ++W ++W   +G+ W   + ++      ++ WDP  +      GW  F+  FE  WL+WL AG   +  CL+ +   +YD+TDFM  HPGSPETL E AG DA+E F ++ H+  A GL
Sbjct:  100 SLNKLSSELLVHLLSYLDTHEIVTISITSPRMRENFTSDIIWEQLWRVTYGSHWRHALIRQLRESRDIY-WDPADNFGPPQTGWYHFYLAFEVCWLDWLLAGYATQDKCLLAIDNAIYDVTDFMFEHPGSPETLSEGAGCDATELFYEISHTSFAAGL 256          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFP0_9PHAE8.350e-22981.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI17_ECTSI1.440e-16085.76F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835Z6K8_9STRA3.230e-3948.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2FKK9_9STRA1.130e-3844.00Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S3Y614_HETAK6.380e-3744.87Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TKW6_9STRA2.800e-3345.16Cytochrome b5 n=2 Tax=Monodopsidaceae TaxID=425072... [more]
A0A7S3Y620_HETAK2.590e-3146.56Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2B084_9STRA2.450e-2840.00Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2SV73_9STRA3.730e-2736.70Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482SPR7_9ARCH2.830e-2634.81Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig98contigE-siliculosus-1a_M_contig98:284731..286479 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size1242
Model size1271
Exons2
Ec32 orthologEc-00_000680.1
Ec32 ortholog descriptionF-box domain
Hectar predicted targeting categorymitochondrion
Best eggNOG OGNA|NA|NA
Best tax levelBacillariophyta
COG Functional cat.CI
EggNOG OGs2XD69@2836,COG5274@1,KOG0537@2759
EggNOG free text desc.Cytochrome b5-like Heme/Steroid binding domain
Seed eggNOG ortholog2850.Phatr49358
Seed ortholog evalue5e-19
Seed ortholog score102.4
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig98.17708.1prot_E-siliculosus-1a_M_contig98.17708.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig98 284759..286479 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936561.8924513-UTR-E-siliculosus-1a_M_contig98:284730..2847581622936561.8924513-UTR-E-siliculosus-1a_M_contig98:284730..284758Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig98 284731..284758 +
1696251132.0010366-UTR-E-siliculosus-1a_M_contig98:284730..2847581696251132.0010366-UTR-E-siliculosus-1a_M_contig98:284730..284758Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig98 284731..284758 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936561.9132497-CDS-E-siliculosus-1a_M_contig98:284758..2855561622936561.9132497-CDS-E-siliculosus-1a_M_contig98:284758..285556Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 284759..285556 +
1696251132.0147083-CDS-E-siliculosus-1a_M_contig98:284758..2855561696251132.0147083-CDS-E-siliculosus-1a_M_contig98:284758..285556Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 284759..285556 +
1622936561.9319906-CDS-E-siliculosus-1a_M_contig98:286035..2864791622936561.9319906-CDS-E-siliculosus-1a_M_contig98:286035..286479Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 286036..286479 +
1696251132.0257635-CDS-E-siliculosus-1a_M_contig98:286035..2864791696251132.0257635-CDS-E-siliculosus-1a_M_contig98:286035..286479Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 286036..286479 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig98.17708.1

>prot_E-siliculosus-1a_M_contig98.17708.1 ID=prot_E-siliculosus-1a_M_contig98.17708.1|Name=mRNA_E-siliculosus-1a_M_contig98.17708.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=414bp
MCARIAAQQRQRASAARRLRQAEDERRLESLVAGRTAMMIRPLDLSVNNH
LQQLRASVDASWSSFSTAWDARRARGSGSGSSEGGALLSDAKATAAPPPP
PLPPAAGFVMPPCTHRGAPPAGSGRGRGHTAVEEGERTAAAEAECPECAA
IAAAHVLAGAGAATTVGRLQQQQGRGTDVVDVWAGSSLGVLNADALHRAL
TFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAAR
RWHLHDWDPKSSAVTQGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGR
LYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKSLDSLA
PGCAAAAAAAGGGGGGSNWRGSSASGARGNGSGGGGGGGGACMLSSTAQR
IRKGRALARREAKA
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mRNA from alignment at E-siliculosus-1a_M_contig98:284731..286479+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig98.17708.1 ID=mRNA_E-siliculosus-1a_M_contig98.17708.1|Name=mRNA_E-siliculosus-1a_M_contig98.17708.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1749bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:284731..286479+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GGCGGCGGCGGACACCGGCAAGCCGTGCATGTGCGCCAGGATCGCCGCGC AGCAGCGGCAGCGGGCCTCGGCCGCGAGGCGCCTGCGCCAGGCGGAGGAC GAGCGCAGGCTCGAGAGCTTGGTGGCGGGGAGGACGGCGATGATGATCCG GCCGCTGGACCTGTCGGTGAACAACCACCTGCAGCAGCTGCGCGCGTCGG TGGACGCGTCGTGGTCGTCCTTCTCGACGGCATGGGACGCGAGGCGGGCG AGGGGTAGCGGGTCGGGAAGCTCCGAAGGCGGCGCGCTGCTGTCGGACGC GAAGGCGACTGCTGCGCCGCCGCCGCCGCCGCTACCCCCCGCCGCCGGGT TCGTGATGCCCCCCTGCACCCACCGCGGAGCCCCCCCCGCCGGCAGTGGA AGAGGGCGAGGGCACACGGCCGTCGAAGAGGGGGAGAGAACAGCAGCGGC GGAGGCGGAGTGCCCGGAGTGCGCCGCGATTGCCGCCGCGCACGTGCTCG CCGGCGCCGGTGCCGCCACCACCGTTGGGCGGCTGCAACAGCAGCAGGGG AGAGGGACCGACGTCGTCGACGTCTGGGCGGGTTCCTCGCTGGGGGTTCT CAACGCTGACGCGCTGCACAGGGCGCTGACCTTCCTGCAGCCCCGGGACC TGCTGGAGCTGGCGCAGGCGTCGAGGGGGGCCCGGGAGGCGGCGGACTCG CAGCTGGTGTGGAGGGAGGTGTGGTGGGCGAGGTTCGGAGCGATCTGGGA GTCGGAGATCTGCAAGAAGGCGGCGCGGAGATGGCACCTGCACGATTGGG ACCCCAAGTCGTCTGCGGTAACTCAGGTCAGAGTTCTGAGCCGTTTTTTT TTGGGGGGAGGGCGGGGGACGGATGGGGAATGGGTGTGGTCGTGTATTTA AAGCGTGTGTATTCTCTGTTGCGTTGGTGCCACCTGGGATTGTTGGGCCG GCGACAAGTGCTGTGTGTCCATGCTGCTCATCGCGTGTGTTGTGGGTTGT TGTGTGGTTTGTGTCAATGGCGAGTCGGTCTGTTTGCGACACCTCAGAAC AGATACAACCAACAAGACACTCTGAAATTTCGTCCGTCCCCCCCGCAAAC TCTGTTGTTCCTACCCCCCCCATATCGATAGGATAGGATACAAGGTAGGC ACAACTGTTTTGAGCCCACTTTGGCAACGTAGGGAAGAACGATTGGTCAT CGGTGATCGGTCCTGTAGGAACAATGCTCCGCCCTCTCGAAGACGCTGGT CTAACAGCTAAGGCATGAGTTACCCCCCCACCCACCCCCACCCCCTCAAA ACCAGGGCTGGAGAGAGTTCTTCTTCGAGTTCGAGGCGACCTGGCTGGAG TGGCTGGCGGCCGGGCAGAACTTCGAGTCGAGCTGCCTGGTCGGTGTGCA CGGCCGCCTGTACGACATCACCGACTTCATGCACCGACACCCGGGATCCC CGGAGACACTCATGGAGAACGCCGGGGCGGACGCCTCGGAGTTTTTCGAG GACGTCGGGCACTCCCTCGACGCCCGCGGCCTCATGAAGTCACTCGACAG CCTCGCGCCTGGCTGCGCCGCCGCCGCCGCCGCCGCCGGTGGCGGAGGAG GGGGGTCGAATTGGCGGGGGTCATCGGCGTCTGGAGCTCGCGGGAACGGT AGCGGTGGCGGCGGTGGCGGTGGCGGCGCGTGCATGCTGTCGTCTACGGC GCAGAGGATCAGGAAAGGGCGGGCGCTGGCAAGGAGAGAAGCGAAGGCC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig98:284731..286479+

>mRNA_E-siliculosus-1a_M_contig98.17708.1 ID=mRNA_E-siliculosus-1a_M_contig98.17708.1|Name=mRNA_E-siliculosus-1a_M_contig98.17708.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2484bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:284731..286479+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTGCGCCAGGATCGCCGCGCAGCAGCGGCAGCGGGCCTCGGCCGCGAG
GCGCCTGCGCCAGGCGGAGGACGAGCGCAGGCTCGAGAGCTTGGTGGCGG
GGAGGACGGCGATGATGATCCGGCCGCTGGACCTGTCGGTGAACAACCAC
CTGCAGCAGCTGCGCGCGTCGGTGGACGCGTCGTGGTCGTCCTTCTCGAC
GGCATGGGACGCGAGGCGGGCGAGGGGTAGCGGGTCGGGAAGCTCCGAAG
GCGGCGCGCTGCTGTCGGACGCGAAGGCGACTGCTGCGCCGCCGCCGCCG
CCGCTACCCCCCGCCGCCGGGTTCGTGATGCCCCCCTGCACCCACCGCGG
AGCCCCCCCCGCCGGCAGTGGAAGAGGGCGAGGGCACACGGCCGTCGAAG
AGGGGGAGAGAACAGCAGCGGCGGAGGCGGAGTGCCCGGAGTGCGCCGCG
ATTGCCGCCGCGCACGTGCTCGCCGGCGCCGGTGCCGCCACCACCGTTGG
GCGGCTGCAACAGCAGCAGGGGAGAGGGACCGACGTCGTCGACGTCTGGG
CGGGTTCCTCGCTGGGGGTTCTCAACGCTGACGCGCTGCACAGGGCGCTG
ACCTTCCTGCAGCCCCGGGACCTGCTGGAGCTGGCGCAGGCGTCGAGGGG
GGCCCGGGAGGCGGCGGACTCGCAGCTGGTGTGGAGGGAGGTGTGGTGGG
CGAGGTTCGGAGCGATCTGGGAGTCGGAGATCTGCAAGAAGGCGGCGCGG
AGATGGCACCTGCACGATTGGGACCCCAAGTCGTCTGCGGTAACTCAGAT
GTGCGCCAGGATCGCCGCGCAGCAGCGGCAGCGGGCCTCGGCCGCGAGGC
GCCTGCGCCAGGCGGAGGACGAGCGCAGGCTCGAGAGCTTGGTGGCGGGG
AGGACGGCGATGATGATCCGGCCGCTGGACCTGTCGGTGAACAACCACCT
GCAGCAGCTGCGCGCGTCGGTGGACGCGTCGTGGTCGTCCTTCTCGACGG
CATGGGACGCGAGGCGGGCGAGGGGTAGCGGGTCGGGAAGCTCCGAAGGC
GGCGCGCTGCTGTCGGACGCGAAGGCGACTGCTGCGCCGCCGCCGCCGCC
GCTACCCCCCGCCGCCGGGTTCGTGATGCCCCCCTGCACCCACCGCGGAG
CCCCCCCCGCCGGCAGTGGAAGAGGGCGAGGGCACACGGCCGTCGAAGAG
GGGGAGAGAACAGCAGCGGCGGAGGCGGAGTGCCCGGAGTGCGCCGCGAT
TGCCGCCGCGCACGTGCTCGCCGGCGCCGGTGCCGCCACCACCGTTGGGC
GGCTGCAACAGCAGCAGGGGAGAGGGACCGACGTCGTCGACGTCTGGGCG
GGTTCCTCGCTGGGGGTTCTCAACGCTGACGCGCTGCACAGGGCGCTGAC
CTTCCTGCAGCCCCGGGACCTGCTGGAGCTGGCGCAGGCGTCGAGGGGGG
CCCGGGAGGCGGCGGACTCGCAGCTGGTGTGGAGGGAGGTGTGGTGGGCG
AGGTTCGGAGCGATCTGGGAGTCGGAGATCTGCAAGAAGGCGGCGCGGAG
ATGGCACCTGCACGATTGGGACCCCAAGTCGTCTGCGGTAACTCAGGGCT
GGAGAGAGTTCTTCTTCGAGTTCGAGGCGACCTGGCTGGAGTGGCTGGCG
GCCGGGCAGAACTTCGAGTCGAGCTGCCTGGTCGGTGTGCACGGCCGCCT
GTACGACATCACCGACTTCATGCACCGACACCCGGGATCCCCGGAGACAC
TCATGGAGAACGCCGGGGCGGACGCCTCGGAGTTTTTCGAGGACGTCGGG
CACTCCCTCGACGCCCGCGGCCTCATGAAGTCACTCGACAGCCTCGCGCC
TGGCTGCGCCGCCGCCGCCGCCGCCGCCGGTGGCGGAGGAGGGGGGTCGA
ATTGGCGGGGGTCATCGGCGTCTGGAGCTCGCGGGAACGGTAGCGGTGGC
GGCGGTGGCGGTGGCGGCGCGTGCATGCTGTCGTCTACGGCGCAGAGGAT
CAGGAAAGGGCGGGCGCTGGCAAGGAGAGAAGCGAAGGCCGGCTGGAGAG
AGTTCTTCTTCGAGTTCGAGGCGACCTGGCTGGAGTGGCTGGCGGCCGGG
CAGAACTTCGAGTCGAGCTGCCTGGTCGGTGTGCACGGCCGCCTGTACGA
CATCACCGACTTCATGCACCGACACCCGGGATCCCCGGAGACACTCATGG
AGAACGCCGGGGCGGACGCCTCGGAGTTTTTCGAGGACGTCGGGCACTCC
CTCGACGCCCGCGGCCTCATGAAGTCACTCGACAGCCTCGCGCCTGGCTG
CGCCGCCGCCGCCGCCGCCGCCGGTGGCGGAGGAGGGGGGTCGAATTGGC
GGGGGTCATCGGCGTCTGGAGCTCGCGGGAACGGTAGCGGTGGCGGCGGT
GGCGGTGGCGGCGCGTGCATGCTGTCGTCTACGGCGCAGAGGATCAGGAA
AGGGCGGGCGCTGGCAAGGAGAGAAGCGAAGGCC
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