mRNA_E-siliculosus-1a_M_contig98.17700.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig98.17700.1 vs. uniprot
Match: A0A6H5L5X5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5X5_9PHAE) HSP 1 Score: 886 bits (2289), Expect = 8.960e-311 Identity = 583/676 (86.24%), Postives = 600/676 (88.76%), Query Frame = 1
Query: 1177 MEVWHDKCLPGSLRVARPGELTRKILDIVADDQDKEPSQVVHTHLCILLAEGDDLELKRPRMFSSATTPSPGETPTSKKALSHSRSISSFDLGPSLEKNGLARGGDASLGAITNRNVAGIEEALEKVAKYRERIVILKEDRRAKKALVDQLRHELEEKEATLSAENERLRLERTDIKDRAKGLWVDLENLRRDAENNAAENNISRQDREQLRKQVDRLRRERNSARADAMRWLEQQHAMSSSRLLPVGA--GAGTADEANGEGFEGXXXXXXXXGGGIFPKTPGPGEAGPPMMGSWAQTAPGGSMTGMGDGGMLAHQQVSVDQKAAATIAKLKNKVNRLRRERDDAEVQASNWLKSEQERMALNSNSGSTSSNFXXXXXXTALIEAGPAXXXXXXXXXXSSGGPVVASLKAESLQLKKELQNARAEAERFKRKLGSGSGLSPNVAPAGRGGSARGLVGSGQDKGLDDSEPQEARLALGRLLGQALNLLDPQAAADAVAVAAKRMSAPXXXXXXXXXXXXXXXXXXXXGAAGTMKLSTGEVSTSSTVQTSATEALSPQSVHEGTPPRAEEELEAXXXXXXXXXXXXXKAFVAGLKDNGLTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPALSGVKAAVAAINISGYSAEPRKKEVGRHPFTASGLVGSKTTNME 3198
MEVWHDKCLPGSLRVARPGELTRKILDIVADDQDKEPSQVVHTHLCILLAEGDDLELKRPRMFSSATTPSPGE TSKKALSHSRSIS FDLG SLEKNGLARGGDASLGAITNRNVAGIEEALEKVAKYRERIVILKEDRRAKKALVDQLRHELEEK+ATLSAENERLRLER DIKDRA+GLWVDLENLRRDA KQVDRLRRERNSARADAMRWLEQQHAMSSSR LPVGA GAGTA+E+NGEGFEG GGIFP+TPGPGEAGPPMMGSWAQTAPGGSMTGMGDGGMLAHQ VSVDQKAAATIAKLKNKVNRLRRERDDAEVQASNWLK EQERMALNSNSG XXXXX TALIEA PA SSGGPVVASLKAESLQLKKELQNARAEAER K+KLGS +GLSPNVA AG GGSARGLVGSGQD+ +DDSEPQEARLALG LLG+ALNLLDPQAAADAVAVAAKRMSAP XXXXXXXXXXXXXXXX AAGTMKLS GEVSTSSTVQT+ATEALSPQSV EGTPPRAEEE+EA XXXXXXXXXXXX AFVAGLK++GLTG XXXXXXXXXXXXXXXXXXXXXXXXXXXX PALS VKAAVAAIN SG SA+PR+KEVGRHPF A+GLVGSKTTNME
Sbjct: 1 MEVWHDKCLPGSLRVARPGELTRKILDIVADDQDKEPSQVVHTHLCILLAEGDDLELKRPRMFSSATTPSPGEITTSKKALSHSRSISLFDLGQSLEKNGLARGGDASLGAITNRNVAGIEEALEKVAKYRERIVILKEDRRAKKALVDQLRHELEEKKATLSAENERLRLERNDIKDRAQGLWVDLENLRRDA------------------KQVDRLRRERNSARADAMRWLEQQHAMSSSRSLPVGAVAGAGTAEESNGEGFEGDGGAGGGRVGGIFPQTPGPGEAGPPMMGSWAQTAPGGSMTGMGDGGMLAHQ-VSVDQKAAATIAKLKNKVNRLRRERDDAEVQASNWLKGEQERMALNSNSGXXXXXXXXXXXSTALIEANPAAAGGGGRV--SSGGPVVASLKAESLQLKKELQNARAEAERLKKKLGSRAGLSPNVASAGSGGSARGLVGSGQDEEVDDSEPQEARLALGHLLGKALNLLDPQAAADAVAVAAKRMSAPEVAXXXXXXXXXXXXXXXXRDAAGTMKLSAGEVSTSSTVQTAATEALSPQSVDEGTPPRAEEEIEAAXXXXXXXXXXXXXAFVAGLKEDGLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPALSVVKAAVAAINSSGDSAKPREKEVGRHPFMAAGLVGSKTTNME 655
BLAST of mRNA_E-siliculosus-1a_M_contig98.17700.1 vs. uniprot
Match: D7FZQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ3_ECTSI) HSP 1 Score: 751 bits (1939), Expect = 1.400e-261 Identity = 386/395 (97.72%), Postives = 388/395 (98.23%), Query Frame = 1
Query: 583 RSQPSAAQEGGG---AGGSGRPLSVGRSRTGRTAETRRALRKRSQSVGDKMALVGPGAPSPTTFSPQAPAQPNLLLYHVSRPEPRARWVFNLSKHTNVTDSGPPPETITSTIDKKRPNLGGLVWVNAVAGSLHCCLQKGVKNKAVTPVPANVLDGWLNGQTGLWWIGALKEGHRALWDSHVVMNWAMVFIPSSPEIAAKNNMEVWHDKCLPGSLRVARPGELTRKILDIVADDQDKEPSQVVHTHLCILLAEGDDLELKRPRMFSSATTPSPGETPTSKKALSHSRSISSFDLGPSLEKNGLARGGDASLGAITNRNVAGIEEALEKVAKYRERIVILKEDRRAKKALVDQLRHELEEKEATLSAENERLRLERTDIKDRAKGLWVDLENLRRDA 1758
RSQPSAAQEGGG AGGSGRPLSVGRSRTGRTAETRRALRKRSQSVGDKMALVGPGAPSPTTFSPQAP QPNLLLYHVSRPEPRARWVFNLSKHTNVTDSGPPPETITSTIDKKRPNLGGLVWVNAVAGSLHCCLQKGVKNKAVTPVPANVLDGWLNGQTGLWWIGALKEGHRALWDSHVVMNWAMVFIPSSPEIAAKNNMEVWHDKCLPGSLRVARPGELTRKILDIVADDQDKEPSQVVHTHLCILLAEGDDLELKRPRMFSS TTPSPGETPTSKKALSHSRSISSFDLGPSLEKNGLAR GDASLGAITNRNVAGIEEALEKVAKYRERIVILK+DRRAKKAL+DQLRHELEEKEATLSAENERLRLER DIKDRAKGLWVDLENLRRDA
Sbjct: 8 RSQPSAAQEGGGSGGAGGSGRPLSVGRSRTGRTAETRRALRKRSQSVGDKMALVGPGAPSPTTFSPQAPVQPNLLLYHVSRPEPRARWVFNLSKHTNVTDSGPPPETITSTIDKKRPNLGGLVWVNAVAGSLHCCLQKGVKNKAVTPVPANVLDGWLNGQTGLWWIGALKEGHRALWDSHVVMNWAMVFIPSSPEIAAKNNMEVWHDKCLPGSLRVARPGELTRKILDIVADDQDKEPSQVVHTHLCILLAEGDDLELKRPRMFSSVTTPSPGETPTSKKALSHSRSISSFDLGPSLEKNGLARAGDASLGAITNRNVAGIEEALEKVAKYRERIVILKDDRRAKKALMDQLRHELEEKEATLSAENERLRLERNDIKDRAKGLWVDLENLRRDA 402
BLAST of mRNA_E-siliculosus-1a_M_contig98.17700.1 vs. uniprot
Match: D7FZQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ2_ECTSI) HSP 1 Score: 480 bits (1235), Expect = 4.640e-156 Identity = 349/446 (78.25%), Postives = 356/446 (79.82%), Query Frame = 1
Query: 1864 MRWLEQQHAMSSSRLLPVGAGAGTADEANGEGFEGXXXXXXXXGGGIFPKTPGPGEAGPPMMGSWAQTAPGGSMTGMGDGGMLAHQQVSVDQKAAATIAKLKNKVNRLRRERDDAEVQASNWLKSEQERMALNSNSGSTSSNFXXXXXXTALIEAGPAXXXXXXXXXXSSGGPVVASLKAESLQLKKELQNARAEAERFKRKLGSGSGLSPNVAPAGRGGSARGLVGSGQDKGLDDSEPQEARLALGRLLGQALNLLDPQAAADAVAVAAKRMSAPXXXXXXXXXXXXXXXXXXXX-GAAGTMKLSTGEVSTSSTVQTSATEALSPQSVHEGTPPRAEEELEAXXXXXXXXXXXXXKAFVAGLKDNGLTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPALSGVKAAVAAINISGYSAEPRKKEVGRHPFTASGLVGSKTTNME 3198
MRWLEQQHAMSSSR LPV AGAGTADEANGE EG G GIFPKTPGPGE G PM+ SWAQTAPGGSMTGMGDGGMLAHQ VSVDQKAAATIAKLKNKVNRLRRERDDAEVQASNWLKSEQERMALNS XXXXXX XXXXXXXX SSGGPVVASLKAESLQLKKELQ+ARAEAERFKRKL SGSGLSPNV PAG GG ARGLVG GQD+GLDDSEPQEARLALGRLLGQALNLLDPQAAADAVAVAAKRMSAP XXXXXXXXXXXXXXXXXX GAAG MKLSTGE S+HEG+PPRAEEELEA KAFVAGLKDNGLTG XXXXXXXXXXXXXXXXXXAPALSGVKAAVAAINISGYSAEPR+KEVGRHPF A+GLV SKTTNME
Sbjct: 1 MRWLEQQHAMSSSRSLPVVAGAGTADEANGEALEGDGGAGGGRGDGIFPKTPGPGEGGHPMVASWAQTAPGGSMTGMGDGGMLAHQ-VSVDQKAAATIAKLKNKVNRLRRERDDAEVQASNWLKSEQERMALNSXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXRVSSGGPVVASLKAESLQLKKELQDARAEAERFKRKLASGSGLSPNVTPAGSGGFARGLVGGGQDEGLDDSEPQEARLALGRLLGQALNLLDPQAAADAVAVAAKRMSAPEVXXXXXXXXXXXXXXXXXXQGAAGMMKLSTGE------------------SIHEGSPPRAEEELEAVAMESAAATAGGGKAFVAGLKDNGLTGDEKKDVGASGAXXXXXXXXXXXXXXXXXXAPALSGVKAAVAAINISGYSAEPREKEVGRHPFMAAGLVESKTTNME 425
BLAST of mRNA_E-siliculosus-1a_M_contig98.17700.1 vs. uniprot
Match: A0A6H5KYF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF6_9PHAE) HSP 1 Score: 412 bits (1060), Expect = 1.330e-130 Identity = 310/389 (79.69%), Postives = 313/389 (80.46%), Query Frame = 1
Query: 1 MQLQPPPFPTSPQSPNDGGVGSRDPNPFLHQGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATVPRGRYSAPPLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGGLVRPASSGFEEHRYDATELQPRVRRSSSDQRLDRRFDGEPEPDPDRRRVTNTPGR---YRSQPSAAQEGGGAGGSGRPLSVGRSRTGRTAETRRALRKRSQSVGDKMALVGPGAPSPTTFSPQAPAQPNLLLYHVSRPEPRARWVFNLSKHTNVTDSGPPPETITSTIDKKRPNLGGLVWVNAVAGSLHCCLQKGVKNKAVTPVPANVLDGWLNGQTGLWWIGALKEGHRALWDSHVVMNWAMVFIPSSPE 1158
MQLQPPPFP SPQ PND VGSRDPNPFLHQGNS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX GS GLVRPASSGFEEHRYD TELQ RVRRSSSDQRLD R DGEPE GR GRPLSVGRSR+GRTAE RR+LRKRSQSVGDKM LVGPGAPSP F+P APAQPNLLLYHVSRPEPRARWVFNLSK TNVTDSGPPPETITSTIDKKRPNLGGLVWVNAVAGSLHCCLQKGVKNKAVTPVPANVLDGWLNGQTGLWWIGALKEGHRALWDSHVVMNWAMVFIPSSPE
Sbjct: 1 MQLQPPPFPASPQRPNDSRVGSRDPNPFLHQGNSSSSTSRPYISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSDGLVRPASSGFEEHRYDTTELQQRVRRSSSDQRLDWRLDGEPEXXXXXXXXXXXXGRCXXXXXXXXXXXXXXXXXXXGRPLSVGRSRSGRTAELRRSLRKRSQSVGDKMVLVGPGAPSPP-FNPPAPAQPNLLLYHVSRPEPRARWVFNLSKPTNVTDSGPPPETITSTIDKKRPNLGGLVWVNAVAGSLHCCLQKGVKNKAVTPVPANVLDGWLNGQTGLWWIGALKEGHRALWDSHVVMNWAMVFIPSSPE 381 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig98.17700.1 >prot_E-siliculosus-1a_M_contig98.17700.1 ID=prot_E-siliculosus-1a_M_contig98.17700.1|Name=mRNA_E-siliculosus-1a_M_contig98.17700.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1067bp MQLQPPPFPTSPQSPNDGGVGSRDPNPFLHQGNSSSSSTSRPSPSQQQQQback to top mRNA from alignment at E-siliculosus-1a_M_contig98:170623..180031- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig98.17700.1 ID=mRNA_E-siliculosus-1a_M_contig98.17700.1|Name=mRNA_E-siliculosus-1a_M_contig98.17700.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=9409bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:170623..180031- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig98:170623..180031- >mRNA_E-siliculosus-1a_M_contig98.17700.1 ID=mRNA_E-siliculosus-1a_M_contig98.17700.1|Name=mRNA_E-siliculosus-1a_M_contig98.17700.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=6402bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:170623..180031- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |