prot_E-siliculosus-1a_M_contig98.17697.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig98.17697.1
Unique Nameprot_E-siliculosus-1a_M_contig98.17697.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length228
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig98.17697.1 vs. uniprot
Match: A0A6H5L0C1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0C1_9PHAE)

HSP 1 Score: 371 bits (953), Expect = 9.020e-129
Identity = 208/226 (92.04%), Postives = 216/226 (95.58%), Query Frame = 0 
Query:    2 MALAALHSRGLQACSRVALRAAIAPRTQQLSPAAGAAGARRLLSSPAPTGAPSPTAAAKGQSQLHRGKKAEGEDRRLWPYLKAARQQFFNVILATLSIVMAVKMVEGKGARVALEEEMVELQRRQGVLLRSLSDEAWAEDVAKRVGAAGGKEAVMAEMEKVVAASLLDKETAELEAMRAAALKTSLEQQKHGAPCPGGMGAFADEQPREASASPVAPKPAPSKGMM 227
            M L AL SRGLQACS VA+RAAIAP+TQQL+PA G AGARRLLSSPAPTGAPSPTAAAKGQSQLHRGKKAEGE+RRLWPYLKAARQQFFNVILATLSIVMAVKMVEGKGARVALEEEMVELQR+QGVLLRSLSDEAWAEDVAKR+GAAGGKEAVM E+EKVVAASLLDKETAELEAMRAAALKTSLEQQKHGAP PGG+GAF DEQPREASASPVA KPAPSKGMM
Sbjct:    1 MVLTALRSRGLQACSHVAMRAAIAPQTQQLAPAEGVAGARRLLSSPAPTGAPSPTAAAKGQSQLHRGKKAEGEERRLWPYLKAARQQFFNVILATLSIVMAVKMVEGKGARVALEEEMVELQRQQGVLLRSLSDEAWAEDVAKRIGAAGGKEAVMVEIEKVVAASLLDKETAELEAMRAAALKTSLEQQKHGAPYPGGVGAFDDEQPREASASPVARKPAPSKGMM 226
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L0C1_9PHAE9.020e-12992.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 105..125
NoneNo IPR availableCOILSCoilCoilcoord: 170..190
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..227
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig98contigE-siliculosus-1a_M_contig98:136451..141403 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig98.17697.1mRNA_E-siliculosus-1a_M_contig98.17697.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig98 136346..141549 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig98.17697.1 ID=prot_E-siliculosus-1a_M_contig98.17697.1|Name=mRNA_E-siliculosus-1a_M_contig98.17697.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=228bp
MMALAALHSRGLQACSRVALRAAIAPRTQQLSPAAGAAGARRLLSSPAPT
GAPSPTAAAKGQSQLHRGKKAEGEDRRLWPYLKAARQQFFNVILATLSIV
MAVKMVEGKGARVALEEEMVELQRRQGVLLRSLSDEAWAEDVAKRVGAAG
GKEAVMAEMEKVVAASLLDKETAELEAMRAAALKTSLEQQKHGAPCPGGM
GAFADEQPREASASPVAPKPAPSKGMM*
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