mRNA_E-siliculosus-1a_M_contig98.17690.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig98.17690.1
Unique NamemRNA_E-siliculosus-1a_M_contig98.17690.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig98.17690.1 vs. uniprot
Match: A0A6H5KVS5_9PHAE (GUN4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVS5_9PHAE)

HSP 1 Score: 486 bits (1250), Expect = 1.290e-168
Identity = 249/257 (96.89%), Postives = 251/257 (97.67%), Query Frame = 3 
Query:   30 MVSCAVLMAVAGMAMLGSSTTSAFTASPANIRSQHSRAAARSSCDHAASTQAPSRHPAAAKAGGRRYASQLRMSTAEETPAAAAA--VAREPTRDIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEWEWK 794
            MVSCAVLMAVAG+AMLG STTSAFTASP +IRSQHSRAAAR SCDHAASTQAPSRH AAAKAGGRRYASQLRMSTAEETPAAAAA  VAREPTRDIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEWEWK
Sbjct:    1 MVSCAVLMAVAGIAMLGPSTTSAFTASPTSIRSQHSRAAARPSCDHAASTQAPSRHHAAAKAGGRRYASQLRMSTAEETPAAAAATAVAREPTRDIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEWEWK 257
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BLAST of mRNA_E-siliculosus-1a_M_contig98.17690.1 vs. uniprot
Match: D7FZN6_ECTSI (Tetrapyrrole-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN6_ECTSI)

HSP 1 Score: 375 bits (964), Expect = 7.270e-126
Identity = 198/204 (97.06%), Postives = 199/204 (97.55%), Query Frame = 3 
Query:   30 MVSCAVLMAVAGMAMLGSSTTSAFTASPANIRSQHSRAAARSSCDHAASTQAPSRHPAAAKAGGRRYASQLRMSTAEETPAAAAAVAREPTRDIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVE 641
            MVSCAVLMAVAGMAMLGSSTTSAFT SPA IRSQHSRAAAR SCDHAA TQAPSRHP AAKAGGRRYASQLRMSTAEETPAAAAAVAREPTRDIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEV+
Sbjct:    1 MVSCAVLMAVAGMAMLGSSTTSAFT-SPAIIRSQHSRAAARPSCDHAARTQAPSRHPVAAKAGGRRYASQLRMSTAEETPAAAAAVAREPTRDIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVQ 203
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BLAST of mRNA_E-siliculosus-1a_M_contig98.17690.1 vs. uniprot
Match: A0A836C7C7_9STRA (GUN4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7C7_9STRA)

HSP 1 Score: 276 bits (706), Expect = 6.700e-87
Identity = 126/160 (78.75%), Postives = 138/160 (86.25%), Query Frame = 3 
Query:  306 DIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEW 785
            D P  L S+ GIDYVPLATMLATGD KGADQFTRDALI+AAG GSQKR FVYWT+VKNIPN DLAT+E LWL YS GKFGYSVQ ++W++ KGDFENFCR IGW T   E+ERKLRWFGANEFIYD +RAP+GHLPLTSALRGT LLKEL+ HPVWETEW
Sbjct:   63 DAPDNLSSDAGIDYVPLATMLATGDFKGADQFTRDALIRAAGEGSQKRGFVYWTDVKNIPNKDLATIEKLWLKYSGGKFGYSVQAEVWKRKKGDFENFCRTIGWNTKSEEIERKLRWFGANEFIYDAERAPKGHLPLTSALRGTQLLKELLNHPVWETEW 222
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BLAST of mRNA_E-siliculosus-1a_M_contig98.17690.1 vs. uniprot
Match: A0A1Z5KQ11_FISSO (GUN4 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ11_FISSO)

HSP 1 Score: 256 bits (654), Expect = 4.350e-79
Identity = 119/162 (73.46%), Postives = 139/162 (85.80%), Query Frame = 3 
Query:  309 IPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEWEWK 794
            IPT LPS CG+DYVPLATMLATGDL  ADQFTRDALI+ +GA ++ R+FVY+T+VKNIP+TDLATME LW  +SKGKFGYSVQK  W ++KGDFE FCR+IGWTT D EVERK RWFGA+EFIYDV +AP GHLPLTSALRGT+L+K L+ HPVW+ E +WK
Sbjct:   64 IPTNLPSACGMDYVPLATMLATGDLVAADQFTRDALIEISGAKAKGRNFVYFTDVKNIPSTDLATMERLWNKFSKGKFGYSVQKKKWNQSKGDFEVFCRKIGWTTTDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKSLLKHPVWDNE-DWK 224
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BLAST of mRNA_E-siliculosus-1a_M_contig98.17690.1 vs. uniprot
Match: A0A7S2P4E3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P4E3_9STRA)

HSP 1 Score: 249 bits (635), Expect = 2.710e-76
Identity = 117/163 (71.78%), Postives = 134/163 (82.21%), Query Frame = 3 
Query:  306 DIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEWEWK 794
            +IPT LPS  G DYVPLATMLATG L  ADQFTRDALI+ +GA ++ R FVYWTEVKNIPN DLAT+E LW  +S GKFGY+VQK  WR++KGDFE FCR+IGWTT D EVERK RWFGA+EFIYDV +AP GHLPLTSALRGT L+K L+ HPVWE + +WK
Sbjct:   60 EIPTKLPSAVGKDYVPLATMLATGQLAEADQFTRDALIEISGAKAKGRSFVYWTEVKNIPNEDLATIERLWNKFSGGKFGYTVQKKKWRQSKGDFEAFCRKIGWTTQDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTPLIKNLLNHPVWEND-DWK 221
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BLAST of mRNA_E-siliculosus-1a_M_contig98.17690.1 vs. uniprot
Match: A0A7S2R3S6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3S6_9STRA)

HSP 1 Score: 249 bits (635), Expect = 4.590e-76
Identity = 116/163 (71.17%), Postives = 136/163 (83.44%), Query Frame = 3 
Query:  306 DIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEWEWK 794
            +IPT LPS+ G+DYVPLATMLATG L  ADQFTRDALIK  GA  + R+FVYWTEVK IP+TDLAT+E LW  +S GKFGYSVQK  WR++K DFE FCR+IGWTT D +VERK RWFGA+EFIYDV +AP GHLPLTSALRGT+L+K+L+ HPVWE + +WK
Sbjct:   76 EIPTNLPSDMGMDYVPLATMLATGQLAEADQFTRDALIKLCGATEKGRNFVYWTEVKLIPSTDLATIERLWNKFSGGKFGYSVQKKKWRQSKNDFEVFCRKIGWTTKDGDVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKQLLTHPVWEND-DWK 237
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BLAST of mRNA_E-siliculosus-1a_M_contig98.17690.1 vs. uniprot
Match: A0A6S8ZHG1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZHG1_9STRA)

HSP 1 Score: 248 bits (634), Expect = 5.490e-76
Identity = 117/163 (71.78%), Postives = 138/163 (84.66%), Query Frame = 3 
Query:  306 DIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEWEWK 794
            DIPT LPS+ G+DYVPLATMLATG L  ADQFTRDALI  AG+ ++ RDFVY+TEVKNIP+TDLAT+E LW  +SKGKFGYSVQK  +R+ K DFE FCR+IGWTT D EVERK RWFGA+EFIYDV +AP GHLPLTSALRGT+L+KEL+ HPVW+ + +W+
Sbjct:   69 DIPTNLPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKAKGRDFVYFTEVKNIPSTDLATIERLWSKFSKGKFGYSVQKRKYRQAKNDFEAFCRKIGWTTKDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKELLNHPVWDND-DWQ 230
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BLAST of mRNA_E-siliculosus-1a_M_contig98.17690.1 vs. uniprot
Match: A0A7S2UF66_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UF66_9STRA)

HSP 1 Score: 248 bits (632), Expect = 9.890e-76
Identity = 115/163 (70.55%), Postives = 137/163 (84.05%), Query Frame = 3 
Query:  306 DIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEWEWK 794
            +IPT LPS+ G+DYVPLATMLATG L  ADQFTRDALI  AG+  + RDFVY+TEVKN+P TDLATME LW  +SKGKFGYSVQK  W+++KGDFE FC +IGWTT D +VERK RWFGA+EFIYDV +AP GHLPLTSALRGT+LLK+++ HPVW+ + +WK
Sbjct:   68 EIPTNLPSDVGMDYVPLATMLATGQLAEADQFTRDALIVIAGSKEKGRDFVYFTEVKNMPATDLATMERLWNKFSKGKFGYSVQKKKWKQSKGDFEAFCSKIGWTTKDGDVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLLKQMLNHPVWDND-DWK 229
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BLAST of mRNA_E-siliculosus-1a_M_contig98.17690.1 vs. uniprot
Match: A0A7S0FNL4_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FNL4_9STRA)

HSP 1 Score: 246 bits (629), Expect = 2.430e-75
Identity = 114/163 (69.94%), Postives = 136/163 (83.44%), Query Frame = 3 
Query:  306 DIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEWEWK 794
            +IPT LPS+ G+DYVPLATMLATG L  ADQFTRDALI  AG+  + RDFVYWTEVK IP TDLAT+E LW  +S GKFGYSVQK +W+++KGDFE +C++IGWTT D EVERK RWFGA+EF YDV +AP GHLPLTSALRGT+L+K+L+ HPVWE + +WK
Sbjct:   62 EIPTNLPSDVGMDYVPLATMLATGQLVEADQFTRDALIVLAGSKEKGRDFVYWTEVKEIPATDLATIERLWNKFSGGKFGYSVQKRIWKRSKGDFELWCKKIGWTTQDGEVERKKRWFGASEFTYDVKKAPEGHLPLTSALRGTSLIKQLLDHPVWEND-DWK 223
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig98.17690.1 vs. uniprot
Match: A0A7S2MK00_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MK00_9STRA)

HSP 1 Score: 244 bits (624), Expect = 1.590e-74
Identity = 115/162 (70.99%), Postives = 135/162 (83.33%), Query Frame = 3 
Query:  309 IPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEWEWK 794
            IPT LPS+ G+DYVPLATMLATG L  ADQFTRDALI  AG+  + RDFVY+TEVKNIP+TDLAT+E LW  +S GKFGYSVQK  W+++KGDF+ FCR+IGW T D EVERK RWFGA+EFIYDV +AP GHLPLTSALRGT+L +EL+ HPVWE + +WK
Sbjct:   68 IPTVLPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKEKGRDFVYFTEVKNIPSTDLATIERLWNKFSGGKFGYSVQKRKWKQSKGDFDLFCRKIGWLTKDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLCRELLSHPVWEND-DWK 228
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVS5_9PHAE1.290e-16896.89GUN4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FZN6_ECTSI7.270e-12697.06Tetrapyrrole-binding protein n=1 Tax=Ectocarpus si... [more]
A0A836C7C7_9STRA6.700e-8778.75GUN4 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A1Z5KQ11_FISSO4.350e-7973.46GUN4 domain-containing protein n=2 Tax=Fistulifera... [more]
A0A7S2P4E3_9STRA2.710e-7671.78Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2R3S6_9STRA4.590e-7671.17Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A6S8ZHG1_9STRA5.490e-7671.78Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2UF66_9STRA9.890e-7670.55Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S0FNL4_9STRA2.430e-7569.94Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2MK00_9STRA1.590e-7470.99Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig98contigE-siliculosus-1a_M_contig98:93579..97671 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size768
Model size1580
Exons3
Ec32 orthologEc-08_001130.1
Ec32 ortholog descriptiontetrapyrrole-binding protein
Hectar predicted targeting categorychloroplast
Preferred nameGUN4
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs28PU6@1,2QWGS@2759
EggNOG free text desc.GUN4-like
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009507,GO:0009536,GO:0009987,GO:0010019,GO:0015994,GO:0015995,GO:0018130,GO:0019438,GO:0019899,GO:0023052,GO:0033013,GO:0033014,GO:0034641,GO:0042440,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046906,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0065007,GO:0065009,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576
Seed eggNOG ortholog2880.D7FZN6
Seed ortholog evalue5e-102
Seed ortholog score377.5
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig98.17690.1prot_E-siliculosus-1a_M_contig98.17690.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig98 94362..97642 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936558.5158105-UTR-E-siliculosus-1a_M_contig98:93578..943611622936558.5158105-UTR-E-siliculosus-1a_M_contig98:93578..94361Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig98 93579..94361 -
1696251130.3812973-UTR-E-siliculosus-1a_M_contig98:93578..943611696251130.3812973-UTR-E-siliculosus-1a_M_contig98:93578..94361Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig98 93579..94361 -
1622936558.5732121-UTR-E-siliculosus-1a_M_contig98:97642..976711622936558.5732121-UTR-E-siliculosus-1a_M_contig98:97642..97671Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig98 97643..97671 -
1696251130.4392602-UTR-E-siliculosus-1a_M_contig98:97642..976711696251130.4392602-UTR-E-siliculosus-1a_M_contig98:97642..97671Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig98 97643..97671 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936558.5343277-CDS-E-siliculosus-1a_M_contig98:94361..945231622936558.5343277-CDS-E-siliculosus-1a_M_contig98:94361..94523Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 94362..94523 -
1696251130.395611-CDS-E-siliculosus-1a_M_contig98:94361..945231696251130.395611-CDS-E-siliculosus-1a_M_contig98:94361..94523Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 94362..94523 -
1622936558.5449426-CDS-E-siliculosus-1a_M_contig98:95096..952441622936558.5449426-CDS-E-siliculosus-1a_M_contig98:95096..95244Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 95097..95244 -
1696251130.4061973-CDS-E-siliculosus-1a_M_contig98:95096..952441696251130.4061973-CDS-E-siliculosus-1a_M_contig98:95096..95244Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 95097..95244 -
1622936558.5597334-CDS-E-siliculosus-1a_M_contig98:97184..976421622936558.5597334-CDS-E-siliculosus-1a_M_contig98:97184..97642Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 97185..97642 -
1696251130.4176085-CDS-E-siliculosus-1a_M_contig98:97184..976421696251130.4176085-CDS-E-siliculosus-1a_M_contig98:97184..97642Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig98 97185..97642 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig98.17690.1

>prot_E-siliculosus-1a_M_contig98.17690.1 ID=prot_E-siliculosus-1a_M_contig98.17690.1|Name=mRNA_E-siliculosus-1a_M_contig98.17690.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=256bp
MVSCAVLMAVAGMAMLGSSTTSAFTASPANIRSQHSRAAARSSCDHAAST
QAPSRHPAAAKAGGRRYASQLRMSTAEETPAAAAAVAREPTRDIPTTLPS
ECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKN
IPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMD
AEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWET
EWEWK*
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mRNA from alignment at E-siliculosus-1a_M_contig98:93579..97671-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig98.17690.1 ID=mRNA_E-siliculosus-1a_M_contig98.17690.1|Name=mRNA_E-siliculosus-1a_M_contig98.17690.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4093bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:93579..97671- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTGGAGGTGTATACACGGCCGCGGCACAAATGGTCTCTTGTGCAGTGCTG
ATGGCGGTGGCCGGTATGGCCATGCTGGGGTCCTCAACAACGAGCGCCTT
CACCGCCTCTCCGGCCAACATCCGGTCCCAGCACAGCAGAGCGGCGGCAC
GATCAAGCTGCGACCACGCCGCAAGCACGCAAGCGCCGAGCCGACATCCT
GCTGCCGCGAAGGCCGGCGGGCGACGATACGCGTCACAGCTGCGAATGAG
CACCGCCGAGGAGACTCCTGCGGCGGCCGCGGCCGTAGCTCGGGAGCCGA
CTAGGGACATTCCCACCACATTGCCGTCGGAGTGCGGGATAGACTACGTG
CCGCTGGCTACGATGCTGGCCACGGGGGACCTCAAGGGCGCCGACCAGTT
CACGCGGGACGCGCTAATCAAGGCGGCGGGAGCGGGCAGCCAAAAGAGAG
ACTTTGTGTACTGGACGGAGGTCAAGAACATCCCCAAGTGAGCCATATGA
GACCATGTTACTGCATGAGGATTGGGGAGGTGTGCGTAGGAGTCGGGAGC
ATGGTTCTGCTACATGTAGCACCGATCCAGCCGCATGGTCTGACAGTGCC
GGCTAGATTGCGAGGTCGTGATGGCCGTAAGTCGGTGTTGGTGGTTGCTT
TGAGTGCGGTTCGACGACCTCGTGCGCGAAGCTCCTACATGGACGTACAT
GCGTAAAATGAGCGCTGGATTTTTTTTTTTTACAAATATGCTCCCGCACA
GGCCGACAACGCGACACACGTGTCCGCCGTCATGGATTTGTTTCACTCTC
ATGTGTTGCATGCGTTAAACAGCAGTTGGGGAGGAAGGGAGAAGTTAGGG
ACGAGGGGAAAGGGAGAACCTAGCCATCTTTGCCGACTGGGTGCAGCGAT
TGGCACGAGAAGACAAGCATTAAGACAGCAGGGTCTTTCGTCTTCGGCAA
GCCATGGCCTAGCGTAGACGAAATAGAGACAGCACGAAGAATCTTGCACG
CGGGGCTTTCGTCCTTCCGAGCAACAAAGCAGCAGACTTTCTGTACTACT
GTTGTACACAGGCGTATGGTACAAGCAGTAGAGGACGCTTCTTGCTCTCG
TGTCGCAGCTGGGAGCAGCACAACAGCGGCTCGGCAGCGGTGTCAAGGCA
GCCGATTACCCATCGCCTACAAAACACAGCCGTAGCGATACCGTATTGAT
ACAAGAGTGTGCATCGTGATACAGCGTTTACATACAAGGTGCGGTAACAT
CATTACAGAGAAGCGACGCAGCCAGTGCCGTCGTGCTTTTTCTTGATCTT
GGACTCGAAATGACAAAATGGCAACGCGGATTCCGGAGGAAAGGACAGGT
TCTCTCGTTTTCGGATACAGCAGGTACTGCTGCAGTTGCAATGTTAAATG
TTTCGCCTCTGTCCGGTCTAGTAAAAAGCGATGGTTCTCACCCCCTGTTG
CTTCCCTCACACCAGTAGTTACTCGTAGTAGGCAGATTGCTGTCCTAAGA
GACATCCCATCTCCCACCCAGCGTTCCGGTTGATTTCCACGGTGTCTAGG
CCCGTTTGATCTTGTACGGCTGAGAGGAGAAGATGCAATTCCGATGACAA
TCCAGGATTCGTGCAAGCAAGTCTTTGCGAGTTCGCGTCGTAGAGTGGAT
GTGCCGCCCAGTGCCCACTAACAGAAGTGTATACAACATTCCCGGTACAC
AGCAGTATCATAATTTCTACGGTAGTGCTGATGTTCTGTCTTCTCATGCT
CCGCGGTTTCGGGTGTTGCTGACATCCTCCGCCTTTCTTGCCCTGGTTCC
CTTCCGTTGCCTTCGTTTGGCACATCCCACCGGACCACCTTCGGGAAGAT
ATTGTTCTTTATCTTTGAAATATAATATAAATAGAGAGGGGGGGTTCGAG
GGGGGGTTCGTACCCTTATCCCTAACCCTACAGTACTTAAGACCAAGCTT
AACATCCTCGCGAGGGCTACTCATCCCACCGTATACGTTTGCGAGCCGTC
GTTGTGCCGGTGTGGAGAAGTTTCCGGACTCTTTTTCTTAACAACAGGCG
AGAGTACCGCCCGGGCCAGACTTTTAGAGACGCCTCGTTATCGCCTCCTC
AGGATAGAAGATGTTTCCGGACTCTTTTTCTTCACCATCACAGCGACAAG
CCTCGTTCTACGTGTGCAAACCCCTGTCGCACCTGCGATTCCGAAAACCG
CGCCCGACAAATATCGCAGGACGTCCGTACCGCTGTGTCAAGCTCATTGG
CCTTGGAAGCCGCATGTCGTGCTGAGTTTTGTGCTACCCGCCACGACCGC
ATGGCAATGTACGACATCTTTGCGCACGATTTTTGCCCCCTTCTTCAATC
CCCTTGTCTGTCCAAACACAACGAAAACGTGACGAGTCTGTCCTTAACAA
AAACATGGATATCTTGCCCTTGTTCAGCACGGACTTGGCGACCATGGAGA
ACCTGTGGCTGAGCTATAGCAAGGGAAAGTTCGGCTACAGCGTGCAGAAG
GACCTCTGGCGGAAGACCAAGGGCGACTTCGAGAACTTTTGCCGCCGCAT
CGGCTGGACTACCATGGACGCTGAGGTGCGCTTTGCGATGTACTTGCGTA
GCACGCGAAGGCTGTGGTCCCAAGAGAGGGGTTACATCGCTTTTTCGCCT
GTTTTTTTTTTTTGTGTAGACCCCTATGTTTGAAACACGGCTGGCCCATT
GCAGGGAAAATGTTCAGTTCTTGTATGCCTGCTTCAAGGTCTGCCCTGTC
GCGTAGCCTCGAAGCGAGACTCTGGTTCAGCTCGGATCCTTGCTTGCTGT
ATATACAAACAGGGCGAGACATGAAAACGGAGCCCTGCCCCCACACGCGT
GCCGTTACATTCTCTTGTGTGTTGACGTTAGCTCAACTGACGAAACAAGA
AAAATCTGGTAGCGATTCTGCAGTGGGAGGGGCTCGTATCGGCCCCGTGT
ACAGCAGTACGTAGCTGCGGGTCTTTTCCCTCCTAGTCCTTTTTCTGTAC
CTTTATCCTCTCACTTGTTGTCTCGCTGTCTGCTTTTGCTCTCCGTCGGT
GCGTGTACCTAATACACCCTCTCACTTTTCTTATCACGCCCCTATTTTCG
TCCTCTTTTTTTTTGGTCTCTCGATGTTCGATCTCGTCTTGCCCTCAGGT
GGAGCGCAAGCTGCGCTGGTTCGGCGCCAACGAGTTCATCTACGACGTGG
ACAGGGCCCCCAGGGGACACCTCCCCCTCACCAGCGCGTTGCGAGGCACC
ACCCTTCTCAAGGAGTTGATGATGCACCCGGTGTGGGAGACGGAGTGGGA
GTGGAAGTAGGCAACCGGGTAGACGGAAAGGGGGCACGCAGCCGGGAACT
TGGTTACGCAGGGCCATGTTGTGGTTAGGTTTGGTTAAACGGAGCAGGGG
TGGTACGGGGGGGTAGAGACATTCGTTAGCCCGATGTTTTCCGACAGGTC
AGTCAGTGTAGAGAGAGAGGGTTCAAGTTTTTTTTTTTTGTTTGGCTGTT
TCTTCTTTGACGGCGTACAGAAGTAGTGGCGACGTGGTTTGAGGGGAGAG
CTGGGTTTAGTCAAACGTGTTGGCGCTGACTCGTGTTGTTGGCGAGTTCG
ATCGTGGCAGAGCAGTGCACGAGTCGTACGTTAGGAATTTTGGCTTTTTT
TTCTTGGGAGAACTGGTGACAGCGATGGAAAAAGTAGGGGTGCAGCGCGT
GATTGCTCTCACGTGCAAGGCACGGACGGTGTTGCAGATCTAATGATACT
GCACATTTTCTTTCAGTGAGAACACTTTTTTTTTTTTTAGAAGCGTTCTC
CCAAGTATTGGCAATTCTGGAGTTTCGCGCTCCGGGTTTCGCGAGTTTCA
GGTAACTTTCTTTACAACTAGAGCGATCGTTTTTTGTAATCCGTGTATAC
ACCTACCTCTCTTTGTAGGGCCGACTGCGTGTCGGCTGTCCCGTCTTAGT
TACTGGAGAAACAAACTCATGTCTGGAGTTGGATGCCGAAAGCCGCAGCA
GCGGTGAGGCGACAGGCTACCGTGCATGTTGGCAGAGAGACGATCCAATG
CCGGCGGCAATTTCGAGAAACGATCCAATGCGAGAAATGTGGC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig98:93579..97671-

>mRNA_E-siliculosus-1a_M_contig98.17690.1 ID=mRNA_E-siliculosus-1a_M_contig98.17690.1|Name=mRNA_E-siliculosus-1a_M_contig98.17690.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1536bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:93579..97671- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGTCTCTTGTGCAGTGCTGATGGCGGTGGCCGGTATGGCCATGCTGGG
GTCCTCAACAACGAGCGCCTTCACCGCCTCTCCGGCCAACATCCGGTCCC
AGCACAGCAGAGCGGCGGCACGATCAAGCTGCGACCACGCCGCAAGCACG
CAAGCGCCGAGCCGACATCCTGCTGCCGCGAAGGCCGGCGGGCGACGATA
CGCGTCACAGCTGCGAATGAGCACCGCCGAGGAGACTCCTGCGGCGGCCG
CGGCCGTAGCTCGGGAGCCGACTAGGGACATTCCCACCACATTGCCGTCG
GAGTGCGGGATAGACTACGTGCCGCTGGCTACGATGCTGGCCACGGGGGA
CCTCAAGGGCGCCGACCAGTTCACGCGGGACGCGCTAATCAAGGCGGCGG
GAGCGGGCAGCCAAAAGAGAGACTTTGTGTACTGGACGGAGGTCAAGAAC
ATCCCCAAATGGTCTCTTGTGCAGTGCTGATGGCGGTGGCCGGTATGGCC
ATGCTGGGGTCCTCAACAACGAGCGCCTTCACCGCCTCTCCGGCCAACAT
CCGGTCCCAGCACAGCAGAGCGGCGGCACGATCAAGCTGCGACCACGCCG
CAAGCACGCAAGCGCCGAGCCGACATCCTGCTGCCGCGAAGGCCGGCGGG
CGACGATACGCGTCACAGCTGCGAATGAGCACCGCCGAGGAGACTCCTGC
GGCGGCCGCGGCCGTAGCTCGGGAGCCGACTAGGGACATTCCCACCACAT
TGCCGTCGGAGTGCGGGATAGACTACGTGCCGCTGGCTACGATGCTGGCC
ACGGGGGACCTCAAGGGCGCCGACCAGTTCACGCGGGACGCGCTAATCAA
GGCGGCGGGAGCGGGCAGCCAAAAGAGAGACTTTGTGTACTGGACGGAGG
TCAAGAACATCCCCAACACGGACTTGGCGACCATGGAGAACCTGTGGCTG
AGCTATAGCAAGGGAAAGTTCGGCTACAGCGTGCAGAAGGACCTCTGGCG
GAAGACCAAGGGCGACTTCGAGAACTTTTGCCGCCGCATCGGCTGGACTA
CCATGGACGCTGAGCACGGACTTGGCGACCATGGAGAACCTGTGGCTGAG
CTATAGCAAGGGAAAGTTCGGCTACAGCGTGCAGAAGGACCTCTGGCGGA
AGACCAAGGGCGACTTCGAGAACTTTTGCCGCCGCATCGGCTGGACTACC
ATGGACGCTGAGGTGGAGCGCAAGCTGCGCTGGTTCGGCGCCAACGAGTT
CATCTACGACGTGGACAGGGCCCCCAGGGGACACCTCCCCCTCACCAGCG
CGTTGCGAGGCACCACCCTTCTCAAGGAGTTGATGATGCACCCGGTGTGG
GAGACGGAGTGGGAGTGGAAGTAGGTGGAGCGCAAGCTGCGCTGGTTCGG
CGCCAACGAGTTCATCTACGACGTGGACAGGGCCCCCAGGGGACACCTCC
CCCTCACCAGCGCGTTGCGAGGCACCACCCTTCTCAAGGAGTTGATGATG
CACCCGGTGTGGGAGACGGAGTGGGAGTGGAAGTAG
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