Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 846 |
| Model size | 2496 |
| Exons | 3 |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936557.8626783-UTR-E-siliculosus-1a_M_contig98:43703..43757 | 1622936557.8626783-UTR-E-siliculosus-1a_M_contig98:43703..43757 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig98 43704..43757 + |
| 1696251130.0681014-UTR-E-siliculosus-1a_M_contig98:43703..43757 | 1696251130.0681014-UTR-E-siliculosus-1a_M_contig98:43703..43757 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig98 43704..43757 + |
| 1622936557.9196076-UTR-E-siliculosus-1a_M_contig98:45955..47551 | 1622936557.9196076-UTR-E-siliculosus-1a_M_contig98:45955..47551 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig98 45956..47551 + |
| 1696251130.118256-UTR-E-siliculosus-1a_M_contig98:45955..47551 | 1696251130.118256-UTR-E-siliculosus-1a_M_contig98:45955..47551 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig98 45956..47551 + |
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig98.17686.1 >prot_E-siliculosus-1a_M_contig98.17686.1 ID=prot_E-siliculosus-1a_M_contig98.17686.1|Name=mRNA_E-siliculosus-1a_M_contig98.17686.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=282bp
MADVWGGTTPALALKPCSDSSSGGGFPPAKRPKSRRPQGTRSRQGPKPRL
SPQDEVVDGVRRAMTETLPTWMKELEDKTASLFEIAVSLPHLLACVYWEC
ALQIDTYRSDAGKKKEERESCIDRTKVFLPEKRNEAFEVPCQQVIKSLAV
QLTPLLPDEQPRVVLGFLESTRLHLVVAGYLGLMLDAMLQHPPVVWTNDF
GTEQRFNPEIHSEVVPADGLLAGERCLVIFPSALVKGLPRSKRSTIDEDR
SSRGGPLTKRYVLRIPPPKEMEEMLADAGKA* back to topmRNA from alignment at E-siliculosus-1a_M_contig98:43704..47551+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig98.17686.1 ID=mRNA_E-siliculosus-1a_M_contig98.17686.1|Name=mRNA_E-siliculosus-1a_M_contig98.17686.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3848bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:43704..47551+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CAGCGAGAGGTTTGGGGTGACCGCACGGCTGCGCGCCTTCGGTCGCGTCT
GGGGATGGCAGACGTGTGGGGTGGGACTACCCCAGCGCTAGCGCTCAAGC
CGTGCTCGGACAGTTCCTCCGGGGGCGGTTTTCCTCCGGCGAAACGGCCG
AAATCTCGTCGTCCGCAAGGCACCCGCAGCAGGCAAGGCCCCAAGCCAAG
ACTCAGCCCGCAGGACGAGGTCGTGGATGGCGTTCGACGGGCAATGACGG
AGACTCTTCCAACCTGGATGAAAGAGCTCGAGGATAAGACGGCGTCGTTG
TTCGAGATAGCGGTTTCGCTGCCGCATCTGCTGGCGTGTGTTTACTGGGA
GTGCGCGTTGCAGATCGACACATACAGATCCGATGCAGGCAAGAAGAAGG
AGGAACGGGAGTCCTGCATTGACAGGACCAAGGTCTTTCTGCCTGAGAAG
CGAAATGAGGCTTTTGAGGTCCCGTGCCAGCAAGTGATCAAGAGTCTTGC
GGTCCAGCTCACGCCGCTGTTGCCCGACGAGCAACCGCGTGTGGTATTGG
GGTTTCTGGAGAGCACGCGGCTACATCTCGTAGTCGCTGGGTACCTCGGA
CTAATGCTGGACGCCATGCTTCAGCATCCCCCCGTAGTCTGGACGAACGA
CTTCGGGACGGAACAGAGGTAACACGATCTGTATCTGTCTAGGCAAGGAG
TTACTTGTTCTGCGAAGGGATGATTGGGCACAAAAACGCTGCACACGAGC
ACCTTACAGCTCACTCAAGGCAACCCACTCAAGGAGAGAGAGCCGTTGTC
CAGCGTCGTCTTAAACATGCATGTACTGTAGTCAACATTGCAGAAGAAAA
CGGGACGGGGAGGACTCGTCGGCCGTGAAATTGTTCCCGTGGAAACTTCG
TATTGTTTTGGATCTTACCATTTTTATACCCATCCTGCCACCGATTTTCA
GCACGTAGTCTATGCCATGAAAGCACTACTTCACGGTTGAGGGTTCGTCC
GGGCAACGAAAATTGCCGCCCTCTGATTGTCGTGAGAGGATTGGTGGAAT
GTGATATCTCTATTGTAGCATGTGCAATTGGTTCGTACCGTTCATCCACT
ACTACATGCATATATATATGCATATCACCCTCCGTTTCACGACCACGTTG
ATAGGTTCAATCCCGAAATTCACTCAGAGGTGGTTCCGGCAGACGGTCTC
CTTGCTGGCGAAAGGTGTCTGGTCATTTTCCCCTCGGCGCTGGTGAAGGG
GTTGCCACGCAGCAAGCGGTCGACAATCGACGAAGATCGATCCTCGCGTG
GCGGACCCCTCACGAAGCGGTATGTTCTACGTATACCCCCGCCGAAGGAG
ATGGAGGAGATGCTCGCGTGAGTGCGCCCCGGTGTTTTGTGTTGGGTGGC
AATGTGCGTTCTTTCGTCTTGGAATCTTCTGCGGCAGCACAACATGTACG
TATGTAGTCTAGACACAGCAATATCAGATCCGATTACTTCTTCTGTACAT
TGGCTCACGGACAAAACCAACGAAGCCGGGAAGACATCATATGAAAAGGG
AGAGACAATTTCCTTGATATTCAAAGGGCGATACAATCGAACTTTCTTCG
TCCGGTTGATTCTCCTCGAGCTTGATCCAATAGTGTGTGCGCATCAATCG
AACGTCCATGTCTGCGAGTTTCAGAACATTGACTCTCAGAAATAGGGAGC
GCACCGATATCAAGAGCCGGGAGGAGTGCGATACAAACGGCACTCTAACC
GAAAACGATTTGGGTGGTGCCTTATGTTCAGTGTTCTGGCAGCAGTGGCT
CCAGTCGTTGCTGCAACTACGTAGAACTACATGTAGCTGCCAAGTAAAGC
AACGAAACAATGTTCAGCGCAATACTCGAAAAGCAGGTGATATTTAGCAG
ACGATATGGCGCATGCTCTGGGCCTTCAACCATCTAGTCGGGCACGTTGA
TTTCGGTTGGGTCTGACTTGACCTTCCATGTATCAGTGCTTTAGGGAGTT
TTCGCACCGGTGGAGATGTTTCGGTTTGGAGGTGGAAAGGTAGATAAGCA
TTCAGCCCCCAGCGGCGGTCTTCTCGGTGTTGCCAGTGTTGGCGACCTGA
ATGTGTCTACGAAGCTGTGAGGAGAGGTTGTATTTCAACAACTTGTTGAT
CACCGCAACTAGCTACAGAGACACAGCTCTTACGCGTTTAGCCCCGTCGC
TGATACTTTGCCTTCAACTCCCGTCCCCAACAGAGATGCCGGGAAGGCCT
GAAACGCGAGGTTGCACCTAACGAACTGGTTTTTGGGAGTCTCTACACTG
CGATACTCGGCGTGTGGAAACTTCACTTGTCGTCATGAAGACGGGGGCAG
TCCGGCACAAGATCGCTCCCAATCGCTCTGGACCCTCCGCTTGGCTGGAA
GCGACTCCCTTCAGGTACCCGCACAGTTTCGCCGAGAACGTTAGTTGACT
TGTTTCAGACCTTCGGTTACAACATTGTGCACGCGTGTTTCACTAAACGC
ATGCACAATGTCGTATTCAAAAACTTGAAACGACGAGATTTAGCGTCCTG
CGTAACTGCTGAGGTGCACCTCGGGATCCTGCTCTTGTCCTGCCAAACGT
TGAGTGAGTGTGCTCACTCGTGACATGGATCGTTGTTCTGGTAGCGGATG
ATCAACAGCGGTGCCTACAGTATTTCTCTGTCTGCCATGAAAGATATGGG
CATCGTTTCACCCGGCCGATTGATAAGCAACACTCGGTTCGCCGAGCTGA
GGGGTGAAACAGATGGACGGTGTATGGCCGGGGGCTTAGTTCCTCTCGAT
GAGTTTCTTGGTTCTCGTACCCTACAGTAGGTCACGACGTATCTTTGGAT
ATGACAACGGTCTTCTCTTTGTTGTTTTTAGGTTGTTTACGTAGAGGTCA
TTCGTTTCAAAGCGTCCGTCCGCCTGATTTTGAGCAACCTACTGGTGGTG
GGATGAACAGTTCGCAAGGGTGTTTATCGTCTCGAGTGGCAAGAGGTTTG
GAAGCAACTTTCCTCTGGTGCGATGGGGGGAAACAACCAACCGCAGTTGG
TTTGTGTCGTGTGTCTAAGTGAGGACGAGTATGGGATGTTCATATGAATG
ATATGCATAGAACCAGTCAACTGTATTTTTTTGTCCTCGGTGAATCGTTT
CACCCAATAAAGGCCGCTACAGGAGGAGCGTTGTGGGTCGTTGTTCAGCA
TCATTCCTGGGGCATGCTTCGATGCACTTCGATGTATTCGCCGGAATGTT
CCCATGCAACTTGTCCCATGCACAAACAAGTTTTCGCCTCTTTCTTGGCC
TGATGTCGGTTCATGAGGCCGCTGGAGTGATGCTACTGTACAGTAGTCGC
ATAAAACACTCGCGTTGCACAAACCCCAAAGTCGGGGTGCGGAGATAGAT
TCTCAAGTAAGTTATTGTGCTTTGTGTAAAGTAGCATTAGGGACGGTGGA
AAGCCGCCCTACAATAGACAGGTAGGTTGAGAGGTCCCGCATATTGGCTT
GTCTTACAATGTATAGATGATCGTTCGTACAGGGCGGATCTAGTGTTTGG
ATCGATTGTTTTCGGCTTCTGCTCGTTGCAGGGTTCACGCTGGTGGCATC
TATCAGGGTCCGACTTATTGGCGATATCCTAGTCTTTTTTTCCACCTGCA
CGTAACCCTGGGAGGATGACTAAATCAAGTCTTGTAAGGCCCGTTTCCTA
GAGCAGTGTTTTCGGTTAATCGGGAAGAGCCCCATATTCTACGTATTGCA
ATGGGCATGTGACTTTCCGGAAGGCCGTTGGGATGACGCGAATTATCCAG
CTGCAAACGTGCACACGAGTGAATGAAGTGGCAAAGGCCCAAGTGTTC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig98:43704..47551+ >mRNA_E-siliculosus-1a_M_contig98.17686.1 ID=mRNA_E-siliculosus-1a_M_contig98.17686.1|Name=mRNA_E-siliculosus-1a_M_contig98.17686.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1692bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:43704..47551+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCAGACGTGTGGGGTGGGACTACCCCAGCGCTAGCGCTCAAGCCGTG
CTCGGACAGTTCCTCCGGGGGCGGTTTTCCTCCGGCGAAACGGCCGAAAT
CTCGTCGTCCGCAAGGCACCCGCAGCAGGCAAGGCCCCAAGCCAAGACTC
AGCCCGCAGGACGAGGTCGTGGATGGCGTTCGACGGGCAATGACGGAGAC
TCTTCCAACCTGGATGAAAGAGCTCGAGGATAAGACGGCGTCGTTGTTCG
AGATAGCGGTTTCGCTGCCGCATCTGCTGGCGTGTGTTTACTGGGAGTGC
GCGTTGCAGATCGACACATACAGATCCGATGCAGGCAAGAAGAAGGAGGA
ACGGGAGTCCTGCATTGACAGGACCAAGGTCTTTCTGCCTGAGAAGCGAA
ATGAGGCTTTTGAGGTCCCGTGCCAGCAAGTGATCAAGAGTCTTGCGGTC
CAGCTCACGCCGCTGTTGCCCGACGAGCAACCGCGTGTGGTATTGGGGTT
TCTGGAGAGCACGCGGCTACATCTCGTAGTCGCTGGGTACCTCGGACTAA
TGCTGGACGCCATGCTTCAGCATCCCCCCGTAGTCTGGACGAACGACTTC
GGGACGGAACAGAGATGGCAGACGTGTGGGGTGGGACTACCCCAGCGCTA
GCGCTCAAGCCGTGCTCGGACAGTTCCTCCGGGGGCGGTTTTCCTCCGGC
GAAACGGCCGAAATCTCGTCGTCCGCAAGGCACCCGCAGCAGGCAAGGCC
CCAAGCCAAGACTCAGCCCGCAGGACGAGGTCGTGGATGGCGTTCGACGG
GCAATGACGGAGACTCTTCCAACCTGGATGAAAGAGCTCGAGGATAAGAC
GGCGTCGTTGTTCGAGATAGCGGTTTCGCTGCCGCATCTGCTGGCGTGTG
TTTACTGGGAGTGCGCGTTGCAGATCGACACATACAGATCCGATGCAGGC
AAGAAGAAGGAGGAACGGGAGTCCTGCATTGACAGGACCAAGGTCTTTCT
GCCTGAGAAGCGAAATGAGGCTTTTGAGGTCCCGTGCCAGCAAGTGATCA
AGAGTCTTGCGGTCCAGCTCACGCCGCTGTTGCCCGACGAGCAACCGCGT
GTGGTATTGGGGTTTCTGGAGAGCACGCGGCTACATCTCGTAGTCGCTGG
GTACCTCGGACTAATGCTGGACGCCATGCTTCAGCATCCCCCCGTAGTCT
GGACGAACGACTTCGGGACGGAACAGAGGTTCAATCCCGAAATTCACTCA
GAGGTGGTTCCGGCAGACGGTCTCCTTGCTGGCGAAAGGTGTCTGGTCAT
TTTCCCCTCGGCGCTGGTGAAGGGGTTGCCACGCAGCAAGCGGTCGACAA
TCGACGAAGATCGATCCTCGCGTGGCGGACCCCTCACGAAGCGGTATGTT
CTACGTATACCCCCGCCGAAGGAGATGGAGGAGATGCTCGCGTTCAATCC
CGAAATTCACTCAGAGGTGGTTCCGGCAGACGGTCTCCTTGCTGGCGAAA
GGTGTCTGGTCATTTTCCCCTCGGCGCTGGTGAAGGGGTTGCCACGCAGC
AAGCGGTCGACAATCGACGAAGATCGATCCTCGCGTGGCGGACCCCTCAC
GAAGCGGTATGTTCTACGTATACCCCCGCCGAAGGAGATGGAGGAGATGC
TCGCAGATGCCGGGAAGGCCTGAAGATGCCGGGAAGGCCTGA back to top
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