prot_E-siliculosus-1a_M_contig98.17685.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig98.17685.1
Unique Nameprot_E-siliculosus-1a_M_contig98.17685.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length114
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig98.17685.1 vs. uniprot
Match: D7FZP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZP1_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 2.590e-8
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0 
Query:    1 LWDVGNDTLRNEDVSGLWKLTVLTSLVGWSPWV 33
            LWDVGNDTLRNEDVSGLWKLTVLTSL+   P V
Sbjct:  468 LWDVGNDTLRNEDVSGLWKLTVLTSLISPVPLV 500
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZP1_ECTSI2.590e-884.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..28
NoneNo IPR availableTMHMMTMhelixcoord: 29..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig98contigE-siliculosus-1a_M_contig98:40617..40958 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig98.17685.1mRNA_E-siliculosus-1a_M_contig98.17685.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig98 40617..41003 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig98.17685.1 ID=prot_E-siliculosus-1a_M_contig98.17685.1|Name=mRNA_E-siliculosus-1a_M_contig98.17685.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=114bp
LWDVGNDTLRNEDVSGLWKLTVLTSLVGWSPWVGIADGGLVFVFVLASSF
FSECTENRFGVCVVSLPPSLVVGCNGSNFGVFEVARLSPTPENQHQDLGV
LHLPRDTPLNRTM*
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