mRNA_E-siliculosus-1a_M_contig98.17685.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig98.17685.1 vs. uniprot
Match: D7FZP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZP1_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 4.220e-8 Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 1 Query: 1 LWDVGNDTLRNEDVSGLWKLTVLTSLVGWSPWV 99
LWDVGNDTLRNEDVSGLWKLTVLTSL+ P V
Sbjct: 468 LWDVGNDTLRNEDVSGLWKLTVLTSLISPVPLV 500 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig98.17685.1 >prot_E-siliculosus-1a_M_contig98.17685.1 ID=prot_E-siliculosus-1a_M_contig98.17685.1|Name=mRNA_E-siliculosus-1a_M_contig98.17685.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=114bp LWDVGNDTLRNEDVSGLWKLTVLTSLVGWSPWVGIADGGLVFVFVLASSFback to top mRNA from alignment at E-siliculosus-1a_M_contig98:40617..41003+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig98.17685.1 ID=mRNA_E-siliculosus-1a_M_contig98.17685.1|Name=mRNA_E-siliculosus-1a_M_contig98.17685.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=387bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:40617..41003+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig98:40617..41003+ >mRNA_E-siliculosus-1a_M_contig98.17685.1 ID=mRNA_E-siliculosus-1a_M_contig98.17685.1|Name=mRNA_E-siliculosus-1a_M_contig98.17685.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=684bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:40617..41003+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |