Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17680.1 vs. uniprot
Match:
A0A6H5JIN2_9PHAE (Transket_pyr domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIN2_9PHAE)
HSP 1 Score: 803 bits (2074), Expect = 1.630e-287
Identity = 411/453 (90.73%), Postives = 417/453 (92.05%), Query Frame = 2
Query: 104 MSPSVARCPRSLAAGSAGLRNTVLSAASASATGSRMRSASDSLLLRPPRCNREPWRQRWTAASNGGALARPRTLHPPGFPNRRASSVVDNDIDEDDDSVAAGVRARGTKGASAAAGPGSGCGTRYAEGPSTRMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFFEPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLVGWGAQLRVMSEACDDAEKEGISCELIDLRTILPWDFDTVSRSVKKTGRLVVSHEAPRTGGFAAEVAADMQERCFLHLEAPVQRVCGYDTPFPLVFEKFYVPGRFKVLDAIRDAVNY 1462
MS SV RCPRSLAAGSAGLRN VLS ASAS TGSRMRSASDSLLLRP R NRE RQRWTAASNGGALARPRTLHP GFPNRRASSV+D+DIDE CGTRYAEGPSTRMNLFTAVNAGLRTAMETD+TAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSG+QFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFFEPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLVGWGAQLRVMS+AC+DAEKEGISCELIDLRTILPWDFDTVSRSVKKTGRLVVSHEAPRTGGFAAEVAADMQERCFLHLEAPVQRVCGYDTPFPLVFEKFYVPGRFKVLDAIRDAVNY
Sbjct: 1 MSRSVLRCPRSLAAGSAGLRNAVLSTASASTTGSRMRSASDSLLLRPLRSNRESRRQRWTAASNGGALARPRTLHPTGFPNRRASSVIDSDIDEXXXXXXXXXXXXXXXXXXXXXXXXXXCGTRYAEGPSTRMNLFTAVNAGLRTAMETDETAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFFEPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLVGWGAQLRVMSQACEDAEKEGISCELIDLRTILPWDFDTVSRSVKKTGRLVVSHEAPRTGGFAAEVAADMQERCFLHLEAPVQRVCGYDTPFPLVFEKFYVPGRFKVLDAIRDAVNY 453
BLAST of mRNA_E-siliculosus-1a_M_contig97.17680.1 vs. uniprot
Match:
A0A835ZJS3_9STRA (Thiamine diphosphate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS3_9STRA)
HSP 1 Score: 528 bits (1361), Expect = 7.560e-181
Identity = 253/319 (79.31%), Postives = 286/319 (89.66%), Query Frame = 2
Query: 509 FTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFFEPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLVGWGAQLRVMSEACDDAE-KEGISCELIDLRTILPWDFDTVSRSVKKTGRLVVSHEAPRTGGFAAEVAADMQERCFLHLEAPVQRVCGYDTPFPLVFEKFYVPGRFKVLDAIRDAVNY 1462
FTA+N+ +R A++TD TA VFGEDVAFGGVFRC+ GLKE+FG RVF++ L EQGIAGFAIGYA+MG TAIAE+QFADYIFPA DQ+VNEAAK+RYRSG++FNCGGLTIRAPCGAVGHGGHYHSQSPE+YFAHTPGLKVVMPR+A EAKGLLLAS+R+PDPVIF EPK LYRTSVEDVPDGDYEVPLGVA V+R G DVT+VGWGAQLRV++E CD A ++GISCELIDLRT+LPWD TV+ SV+KTGRLVVSHEAPRT GFAAEVAAD+QERCFLHL+APV RVCGYDTPFPLVFE+ Y P KV +AI+ AVNY
Sbjct: 44 FTAINSAMRVALQTDPTATVFGEDVAFGGVFRCSVGLKEEFGASRVFNTPLSEQGIAGFAIGYAAMGGTAIAEMQFADYIFPAMDQLVNEAAKYRYRSGNEFNCGGLTIRAPCGAVGHGGHYHSQSPEAYFAHTPGLKVVMPRDAREAKGLLLASIRDPDPVIFLEPKALYRTSVEDVPDGDYEVPLGVAQVLRAGADVTVVGWGAQLRVLAEGCDMARARDGISCELIDLRTVLPWDAATVAASVRKTGRLVVSHEAPRTCGFAAEVAADLQERCFLHLQAPVARVCGYDTPFPLVFERHYAPDALKVYEAIKKAVNY 362
BLAST of mRNA_E-siliculosus-1a_M_contig97.17680.1 vs. uniprot
Match:
A0A1V9Z8A2_9STRA (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z8A2_9STRA)
HSP 1 Score: 526 bits (1354), Expect = 5.600e-180
Identity = 244/322 (75.78%), Postives = 286/322 (88.82%), Query Frame = 2
Query: 497 RMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFFEPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLVGWGAQLRVMSEACDDAEKEGISCELIDLRTILPWDFDTVSRSVKKTGRLVVSHEAPRTGGFAAEVAADMQERCFLHLEAPVQRVCGYDTPFPLVFEKFYVPGRFKVLDAIRDAVNY 1462
RMN+FTA+N +R AMETD TA+VFGEDVAFGGVFRCT LKE+FG DRVF+S LCEQGIAGFAIGYAS+G+TAIAEIQFADYIFPAFDQIVNEAAKFRYRSG+QF+CG LT R P GAVGHG HYHSQSPE+YFAHTPGLKVVMPRN T+AKGLLLAS+R+P+PV+FFEPK LYR SV +VP GD+ +PLG AD+MR G+D+TLVGWGAQ+RV+ +ACD AE+ G+SCELIDL+TI PWD DTV +SV+KTGRL++SHEAPRTGGFA+E+A+ +QERCFL+LEAP+QRVCGYDTPFPL +EK Y+P K +AI+ AVNY
Sbjct: 29 RMNMFTALNDAMRVAMETDPTAVVFGEDVAFGGVFRCTVDLKEKFGEDRVFNSPLCEQGIAGFAIGYASIGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFDCGKLTFRTPYGAVGHGAHYHSQSPEAYFAHTPGLKVVMPRNPTQAKGLLLASIRDPNPVVFFEPKALYRASVSEVPVGDFTIPLGQADIMRTGSDITLVGWGAQMRVLEDACDMAEEAGVSCELIDLQTITPWDVDTVEQSVRKTGRLIISHEAPRTGGFASEIASTIQERCFLNLEAPIQRVCGYDTPFPLAYEKLYLPDALKNFEAIKHAVNY 350
BLAST of mRNA_E-siliculosus-1a_M_contig97.17680.1 vs. uniprot
Match:
A0A1V9YPY9_9STRA (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPY9_9STRA)
HSP 1 Score: 523 bits (1347), Expect = 5.950e-179
Identity = 240/322 (74.53%), Postives = 288/322 (89.44%), Query Frame = 2
Query: 497 RMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFFEPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLVGWGAQLRVMSEACDDAEKEGISCELIDLRTILPWDFDTVSRSVKKTGRLVVSHEAPRTGGFAAEVAADMQERCFLHLEAPVQRVCGYDTPFPLVFEKFYVPGRFKVLDAIRDAVNY 1462
RMN+FTA+N +R AMETD +A++FGEDVAFGGVFRCT LKE+FG DRVF+S LCEQGIAGFAIGYAS+G+TAIAEIQFADYIFPAFDQIVNEAAKFRYRSG+QF+CG LT RAP GAVGHG HYHSQSPE+YFAHTPGLKVV+PRN T+AKGLLLAS+R+P+PV+FFEPK LYR SV DVP GD+E+PLGVAD++R GTDVT++GWGAQ+RV+ +ACD AE+ G+SCELIDL+TI PWD DT+ +SV+KTGRL++SHEAP+TGGFA+E+A+ +Q+RCFL+LEAP+QRVCGYDTPFPL +EK Y+P K +AI+ VNY
Sbjct: 27 RMNMFTALNDAMRVAMETDPSAVIFGEDVAFGGVFRCTVDLKEKFGEDRVFNSPLCEQGIAGFAIGYASIGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFDCGKLTFRAPYGAVGHGAHYHSQSPEAYFAHTPGLKVVIPRNPTQAKGLLLASIRDPNPVVFFEPKALYRASVSDVPVGDFELPLGVADIVRPGTDVTVLGWGAQMRVLEDACDMAEEAGVSCELIDLQTITPWDVDTIEQSVRKTGRLIISHEAPKTGGFASEIASTIQDRCFLNLEAPIQRVCGYDTPFPLAYEKLYLPDALKNFEAIKHVVNY 348
BLAST of mRNA_E-siliculosus-1a_M_contig97.17680.1 vs. uniprot
Match:
A0A7S1C9I4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9I4_9STRA)
HSP 1 Score: 515 bits (1327), Expect = 5.420e-176
Identity = 243/328 (74.09%), Postives = 283/328 (86.28%), Query Frame = 2
Query: 479 AEGPSTRMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFFEPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLVGWGAQLRVMSEACDDAEKEGISCELIDLRTILPWDFDTVSRSVKKTGRLVVSHEAPRTGGFAAEVAADMQERCFLHLEAPVQRVCGYDTPFPLVFEKFYVPGRFKVLDAIRDAVNY 1462
A+GP RMN+FTA+N LR A+ TDDTA++FGEDVAFGGVFRC+ L+E+FG DRVF++ LCEQGIAGFAIGYA+MG+TAIAE+QFADYIFPAFDQIVNEAAK+RYRSGDQ++CG LTIRAP GAVGHGGHYHSQSPE+YFAHTPGLKVV R+ +AKGLLL+ +R+PDP +FFEPK LYR SVEDVP GDY +PLGVADVMREGTD+TLVGWGAQ V+++A D AE+ GISCELIDLR++LPWD D V +SVKKTGRL+VSHEAP TGGFA EV A +Q+RCFL LEAP RVCGYDTPFPL FEK Y+P + +AI+ AVNY
Sbjct: 17 ADGPVQRMNMFTAINDALRVALRTDDTAVLFGEDVAFGGVFRCSVDLREEFGEDRVFNTPLCEQGIAGFAIGYAAMGRTAIAEMQFADYIFPAFDQIVNEAAKYRYRSGDQYDCGPLTIRAPYGAVGHGGHYHSQSPEAYFAHTPGLKVVFCRSPKDAKGLLLSCIRDPDPCLFFEPKALYRASVEDVPTGDYTIPLGVADVMREGTDITLVGWGAQCHVLAKAADLAEEAGISCELIDLRSVLPWDVDAVEKSVKKTGRLLVSHEAPITGGFAGEVVATIQDRCFLSLEAPCARVCGYDTPFPLAFEKIYLPDHLRNFEAIKAAVNY 344
BLAST of mRNA_E-siliculosus-1a_M_contig97.17680.1 vs. uniprot
Match:
A0A067CKD9_SAPPC (2-oxoisovalerate dehydrogenase subunit beta n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CKD9_SAPPC)
HSP 1 Score: 509 bits (1310), Expect = 2.010e-173
Identity = 239/322 (74.22%), Postives = 281/322 (87.27%), Query Frame = 2
Query: 497 RMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFFEPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLVGWGAQLRVMSEACDDAEKEGISCELIDLRTILPWDFDTVSRSVKKTGRLVVSHEAPRTGGFAAEVAADMQERCFLHLEAPVQRVCGYDTPFPLVFEKFYVPGRFKVLDAIRDAVNY 1462
RMN+FTA+N +R AMETD TA+VFGEDVAFGGVFRCT LKE+FG DRVF+S LCEQGIAGFAIGYAS+G+TAIAEIQFADYIFPAFDQIVNEAAKFRYRSG+QF+CG LT RAP GAVGHG HYHSQSPE+YFAHTPGLKVV+PRN T+AKGLLLAS+R+P+PV+FFEPK LYR SV DVP GD+ VPLG AD+MR GTD+T+VGWGAQ+RV+ +ACD AE+ G+SCELIDL+TI PWD DT+ +SV+KTGRL+ +TGGFA+E+A+ +QERCFL+LEAP+QRVCGYDTPFPL +EK Y+P K +AI+ AVNY
Sbjct: 29 RMNMFTALNDAMRVAMETDPTAVVFGEDVAFGGVFRCTVDLKEKFGEDRVFNSPLCEQGIAGFAIGYASIGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFDCGKLTFRAPYGAVGHGAHYHSQSPEAYFAHTPGLKVVIPRNPTQAKGLLLASIRDPNPVVFFEPKALYRASVSDVPVGDFTVPLGQADIMRSGTDITIVGWGAQMRVLEDACDMAEEAGVSCELIDLQTITPWDVDTIEQSVRKTGRLI------KTGGFASEIASTIQERCFLNLEAPIQRVCGYDTPFPLAYEKLYLPDALKNFEAIKHAVNY 344
BLAST of mRNA_E-siliculosus-1a_M_contig97.17680.1 vs. uniprot
Match:
K3WGU7_GLOUD (Transket_pyr domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGU7_GLOUD)
HSP 1 Score: 506 bits (1303), Expect = 5.050e-172
Identity = 239/322 (74.22%), Postives = 279/322 (86.65%), Query Frame = 2
Query: 497 RMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFFEPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLVGWGAQLRVMSEACDDAEKEGISCELIDLRTILPWDFDTVSRSVKKTGRLVVSHEAPRTGGFAAEVAADMQERCFLHLEAPVQRVCGYDTPFPLVFEKFYVPGRFKVLDAIRDAVNY 1462
+MN+FTA+N +R AM TD +A+VFGEDVAFGGVFRC+ LKE+FG DRVF+S LCEQGIAGFAIGYAS G+TAIAEIQFADYIFPAFDQIVNEAAKFRYRSG +FNCG LT RAP GAVGHGGHYHSQSPE+YFAHTPGLKVVMPRN +AKGLLLAS+R+P+PV+FFEPK LYR SV +VP GDY LG AD++ G+DVT+VGWGAQ+RV+ EAC AE+ GISCELIDL+TI PWD DT+ +SV+KTGRLVVSHEAP+TGGFAAE+A +Q+RCFL LEAP+QRVCGYDTPFPLVFEK+YVP K +AI+ +++
Sbjct: 45 QMNMFTAINDAMRVAMATDPSAVVFGEDVAFGGVFRCSVDLKEEFGADRVFNSPLCEQGIAGFAIGYASTGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGGEFNCGKLTFRAPYGAVGHGGHYHSQSPEAYFAHTPGLKVVMPRNPIKAKGLLLASIRDPNPVVFFEPKALYRASVGEVPVGDYVENLGEADIVSRGSDVTVVGWGAQMRVLEEACAYAEEVGISCELIDLQTIFPWDVDTIEQSVRKTGRLVVSHEAPQTGGFAAEIATTIQDRCFLSLEAPIQRVCGYDTPFPLVFEKYYVPDALKNFEAIKKVMDF 366
BLAST of mRNA_E-siliculosus-1a_M_contig97.17680.1 vs. uniprot
Match:
A0A812TXL3_9DINO (BkdB protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TXL3_9DINO)
HSP 1 Score: 504 bits (1298), Expect = 2.580e-171
Identity = 236/328 (71.95%), Postives = 287/328 (87.50%), Query Frame = 2
Query: 482 EGPSTRMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFFEPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLVGWGAQLRVMSEACDDAEKE-GISCELIDLRTILPWDFDTVSRSVKKTGRLVVSHEAPRTGGFAAEVAADMQERCFLHLEAPVQRVCGYDTPFPLVFEKFYVPGRFKVLDAIRDAVNY 1462
EGP +MNLFTA+N G+R A++TDDTA+VFGEDVAFGGVFRC+ LKE+FGP+RVF++ LCEQGIAGFAIGYA+MG+TAIAE+QFADYIFPAFDQIVNEAAK+RYRSGD+FNCGGLT R+P GAVGHGGHYHSQSPE+YFAHTPGLKVV+PR+ AKGLLLA VR+P+P +FFEPK LYR +VE+VP+GDY +PLGVA+V+++G D+T+V +GAQ+ V A D A+ E G S E+IDLRTI PWD DTV+ SV+KTGRL+V+HEAPRTGGF AEVA+++ ERCFL LEAPVQRVCGYDTPFPL+FEK+YVP K+ +AI+D + +
Sbjct: 36 EGPRKKMNLFTAINDGMRVALKTDDTAVVFGEDVAFGGVFRCSVDLKEEFGPERVFNTPLCEQGIAGFAIGYAAMGRTAIAEMQFADYIFPAFDQIVNEAAKYRYRSGDEFNCGGLTFRSPYGAVGHGGHYHSQSPEAYFAHTPGLKVVVPRSPAAAKGLLLACVRDPNPCLFFEPKALYRAAVEEVPEGDYTLPLGVAEVVQKGADITVVAYGAQVHVAQRAADRAQAELGASVEVIDLRTIAPWDRDTVAASVRKTGRLLVTHEAPRTGGFGAEVASEITERCFLSLEAPVQRVCGYDTPFPLIFEKWYVPDDKKIFEAIKDTLEF 363
BLAST of mRNA_E-siliculosus-1a_M_contig97.17680.1 vs. uniprot
Match:
A0A3F2S123_9STRA (Transket_pyr domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S123_9STRA)
HSP 1 Score: 504 bits (1298), Expect = 2.980e-171
Identity = 238/323 (73.68%), Postives = 277/323 (85.76%), Query Frame = 2
Query: 494 TRMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFFEPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLVGWGAQLRVMSEACDDAEKEGISCELIDLRTILPWDFDTVSRSVKKTGRLVVSHEAPRTGGFAAEVAADMQERCFLHLEAPVQRVCGYDTPFPLVFEKFYVPGRFKVLDAIRDAVNY 1462
TRMNLFTA+N +R AM+TD +A++FGEDVAFGGVFRC+ L+EQFG DRVF+S LCEQGIAGFAIGYAS G+TAIAEIQFADYIFPAFDQIVNEAAKFRYRSG +F+CG LT RAP GAVGHGGHYHSQSPE+YFAHTPGLKVVMPRN AKGLLLAS+R+P+PV+F EPK LYR SV +VP GDY LG A+++R GTDVT+VGWGAQ+RV+ EAC AE+ GISCELIDL+TI PWD DT+ SV+KTGRL+VSHEAP++GGFAAE+++ +QERCFL LEAP+QRVCGYDTPFPL FE YVP K +AI+ V+Y
Sbjct: 45 TRMNLFTAINDAMRVAMDTDPSAVLFGEDVAFGGVFRCSVDLREQFGSDRVFNSPLCEQGIAGFAIGYASTGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGSEFDCGKLTFRAPYGAVGHGGHYHSQSPEAYFAHTPGLKVVMPRNPAAAKGLLLASIRDPNPVVFLEPKALYRASVGEVPVGDYVRNLGEAEIVRSGTDVTVVGWGAQMRVLEEACSYAEEVGISCELIDLQTISPWDADTIEHSVRKTGRLIVSHEAPKSGGFAAEISSSIQERCFLSLEAPIQRVCGYDTPFPLAFESHYVPDSLKNFEAIKHVVDY 367
BLAST of mRNA_E-siliculosus-1a_M_contig97.17680.1 vs. uniprot
Match:
A0A5D6Y238_9STRA (Transket_pyr domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y238_9STRA)
HSP 1 Score: 504 bits (1298), Expect = 4.420e-171
Identity = 236/322 (73.29%), Postives = 281/322 (87.27%), Query Frame = 2
Query: 497 RMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFFEPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLVGWGAQLRVMSEACDDAEKEGISCELIDLRTILPWDFDTVSRSVKKTGRLVVSHEAPRTGGFAAEVAADMQERCFLHLEAPVQRVCGYDTPFPLVFEKFYVPGRFKVLDAIRDAVNY 1462
+MNLFTA+N +R A+ TD +A+VFGEDVAFGGVFRC+ L+E+FGP+RVF+S LCEQGIAGFAIGYA+ G+TAIAEIQFADYIFPAFDQIVNEAAK+RYRSG +F+CG LTIRAP GAVGHGGHYHSQSPE+YFAHTPGLKVV+PRN +AKGLLLAS+R+P+PV+FFEPK+LYR SV +VP GDY LG AD++ G+DVT+VGWGAQ+RV+ EAC AE GISCELIDL+TI PWD DT+ +SV+KTGRLVVSHEAP+TGGFAAE+A+ +Q+RCFL LEAP+QRVCGYDTPFPLVFEKFY P K +AI+ V++
Sbjct: 57 QMNLFTAINDAMRVALATDPSAVVFGEDVAFGGVFRCSVDLREEFGPERVFNSPLCEQGIAGFAIGYAATGRTAIAEIQFADYIFPAFDQIVNEAAKYRYRSGGEFDCGKLTIRAPYGAVGHGGHYHSQSPEAYFAHTPGLKVVIPRNPAKAKGLLLASIRDPNPVVFFEPKLLYRASVGEVPVGDYAETLGEADIVTRGSDVTVVGWGAQMRVLEEACSYAEGVGISCELIDLQTIAPWDVDTIEQSVRKTGRLVVSHEAPQTGGFAAEIASTIQDRCFLSLEAPIQRVCGYDTPFPLVFEKFYYPDALKNFEAIKKVVDF 378
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17680.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 25
0 1 Expect = 1.63e-287 / Id = 90.73 Expect = 7.56e-181 / Id = 79.31 Expect = 5.60e-180 / Id = 75.78 Expect = 5.95e-179 / Id = 74.53 Expect = 5.42e-176 / Id = 74.09 Expect = 2.01e-173 / Id = 74.22 Expect = 5.05e-172 / Id = 74.22 Expect = 2.58e-171 / Id = 71.95 Expect = 2.98e-171 / Id = 73.68 Expect = 4.42e-171 / Id = 73.29 Sequence A0A6H5JIN2_9PHAE A0A835ZJS3_9STRA A0A1V9Z8A2_9STRA A0A1V9YPY9_9STRA A0A7S1C9I4_9STRA A0A067CKD9_SAPPC K3WGU7_GLOUD A0A812TXL3_9DINO A0A3F2S123_9STRA A0A5D6Y238_9STRA
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1
Stop 1
Cds size 1362
Model size 2174
Exons 10
Ec32 ortholog Ec-06_009010.1
Ec32 ortholog description Branched chain alpha-keto acid dehydrogenase E1 beta subunit
Hectar predicted targeting category mitochondrion
GOs GO:0003674,GO:0003824,GO:0003826,GO:0003863,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005947,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006520,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009063,GO:0009081,GO:0009083,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009267,GO:0009314,GO:0009416,GO:0009605,GO:0009628,GO:0009642,GO:0009646,GO:0009719,GO:0009725,GO:0009743,GO:0009744,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010565,GO:0014070,GO:0014074,GO:0016020,GO:0016054,GO:0016491,GO:0016624,GO:0016903,GO:0017086,GO:0018130,GO:0019216,GO:0019217,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0019866,GO:0030062,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031960,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032991,GO:0033554,GO:0033865,GO:0033866,GO:0033875,GO:0033993,GO:0034030,GO:0034032,GO:0034033,GO:0034285,GO:0034641,GO:0034654,GO:0035337,GO:0035383,GO:0035384,GO:0042221,GO:0042304,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0043617,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045239,GO:0045240,GO:0045723,GO:0045834,GO:0045923,GO:0046390,GO:0046395,GO:0046483,GO:0046683,GO:0046889,GO:0046890,GO:0046949,GO:0048518,GO:0048522,GO:0048545,GO:0048580,GO:0048582,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051186,GO:0051188,GO:0051239,GO:0051240,GO:0051384,GO:0051591,GO:0051716,GO:0055086,GO:0055114,GO:0061062,GO:0061063,GO:0062012,GO:0062013,GO:0065007,GO:0070013,GO:0071496,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0080090,GO:0090407,GO:0098798,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901568,GO:1901570,GO:1901575,GO:1901576,GO:1901698,GO:1901700,GO:1902494,GO:1990204,GO:2000026
KEGG Module M00036,M00083,M00572
KEGG Pathway ko00061,ko00280,ko00333,ko00640,ko00780,ko01040,ko01100,ko01110,ko01130,ko01212,map00061,map00280,map00333,map00640,map00780,map01040,map01100,map01110,map01130,map01212
BRITE br01601,ko00000,ko00001,ko00002,ko01000,ko01004
Best eggNOG OG NA|NA|NA
Best tax level Eukaryota
COG Functional cat. C
EC 1.1.1.100,1.2.4.4
EggNOG OGs COG0022@1,KOG0525@2759
EggNOG free text desc. 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity
KEGG Reaction R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07599,R07600,R07601,R07602,R07603,R07604,R07759,R07763,R10116,R10120,R10996,R10997,R11671
KEGG ko ko:K00059,ko:K00167
KEGG rclass RC00027,RC00029,RC00117,RC00627,RC02743,RC02883,RC02949,RC02953
Preferred name BCKDHB
Seed eggNOG ortholog 2880.D7FZ95
Seed ortholog evalue 2.5e-253
Seed ortholog score 880.9
Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936555.740073-UTR-E-siliculosus-1a_M_contig97:625372..625415 1622936555.740073-UTR-E-siliculosus-1a_M_contig97:625372..625415 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig97 625373..625415 +
1696251129.138864-UTR-E-siliculosus-1a_M_contig97:625372..625415 1696251129.138864-UTR-E-siliculosus-1a_M_contig97:625372..625415 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig97 625373..625415 +
1622936555.7555528-UTR-E-siliculosus-1a_M_contig97:626187..626247 1622936555.7555528-UTR-E-siliculosus-1a_M_contig97:626187..626247 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig97 626188..626247 +
1696251129.1576166-UTR-E-siliculosus-1a_M_contig97:626187..626247 1696251129.1576166-UTR-E-siliculosus-1a_M_contig97:626187..626247 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig97 626188..626247 +
1622936556.0262547-UTR-E-siliculosus-1a_M_contig97:631301..632010 1622936556.0262547-UTR-E-siliculosus-1a_M_contig97:631301..632010 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig97 631302..632010 +
1696251129.2939825-UTR-E-siliculosus-1a_M_contig97:631301..632010 1696251129.2939825-UTR-E-siliculosus-1a_M_contig97:631301..632010 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig97 631302..632010 +
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig97.17680.1
>prot_E-siliculosus-1a_M_contig97.17680.1 ID=prot_E-siliculosus-1a_M_contig97.17680.1|Name=mRNA_E-siliculosus-1a_M_contig97.17680.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=454bp
MSPSVARCPRSLAAGSAGLRNTVLSAASASATGSRMRSASDSLLLRPPRC NREPWRQRWTAASNGGALARPRTLHPPGFPNRRASSVVDNDIDEDDDSVA AGVRARGTKGASAAAGPGSGCGTRYAEGPSTRMNLFTAVNAGLRTAMETD DTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYAS MGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGA VGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFF EPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLVGWGAQLRVMSEAC DDAEKEGISCELIDLRTILPWDFDTVSRSVKKTGRLVVSHEAPRTGGFAA EVAADMQERCFLHLEAPVQRVCGYDTPFPLVFEKFYVPGRFKVLDAIRDA VNY* back to top mRNA from alignment at E-siliculosus-1a_M_contig97:625373..632010+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig97.17680.1 ID=mRNA_E-siliculosus-1a_M_contig97.17680.1|Name=mRNA_E-siliculosus-1a_M_contig97.17680.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6638bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:625373..632010+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)ACCCAGCATCACCAAGCGTACCGGGAGGAGGGATCGGGAGCAC GTGAGGA
ACTTGTGTTATCAGATGGGCTCGATGTGTTCTGCTGGCACACGCCAGGTT
TTGTAGCGGACCCTAAAATAGCCCCACGAAACGCGCGGCGGTTCTCGTCC
GATCTTCTTGTCATCAGCAGTGTGTCGTGGCGTCGACAACCCACCTTCGA
AGTTCCGTCGCTCGGAGGTGCCCCTGCAACCCATAGAGATCGCAGAGTCG
CGGACACCTTTGTCTTCTTTCCCTTTCACTCTATCGATTTCCATCAATCA
ACGGGGACATCTCCAAAGCATCAACTTTTCCCTCATCTTTTTGGTGAGGA
TGTTGGTTCCCCAGACTACACTGCTGTATACCACAGCAGTGCCGTTGTTT
CCTCAAAGTTGAAGGAGACAGAGAGAAAAACCAGACGACTCTAACTGACC
CTATTCGGTGTACGTAGGCTTGGGAGGCGACTTACTACTCGCTGAATTCC
GTTGCTCGATTTCTACCCTTACTGTATCCCTTCATGGAGAATGAAAACAT
CTCGAGCGTGTCGAGAAAGGTCGCGTGTAAGTCCTCGTCCTGCACCTGCA
GCAGGTGCCCGGAAAATGTTGCGTACATTTATGTACAATTTTCTATACAC
AGAAAGCGTACGCGAGATACAAGCTGGCATTGGTAAATGGCGTTGGTGCG
TTACGCAAAGTGTAGCTTTCGATGCTTGTGCGTCTCATTTTCTATGCATA
GACTTGTTTCGGTGCAGCTGATGTGCTCTCTGCTTGTAACTTTCCGGGGG
CCTCTGTCGCATCAGGAAATTCATCTCGCCTAGAGAGGCGACTTCCCAAG
TGGTCATTCAAGTACGGCGGCGGCC ATGTCGCCCAGTGTTGCAAGGTGCC
CTCGATCCCTAGCAGCGGGTTCCGCCGGCCTGAGGAATACCGTTCTCAGC
GCCGCCAGCGCTAGCGCCACCGGATCGAGGATGAGGAGCGCCTCGGACAG
CTTGCTACTTCGACCGCCTCGCTGCAATCGGGAG GTAAGGGGAAAATAAG
TCACGAGTATGTTGATCGAGCAATTGCGGGCCTTCGGCCGCACGATAGTA
CCCTCACATAGCAAAGCGTGCTCTCCATTACTACTGTAGGACAACGTGCG
CGGCAGCGTTCTTCGAAATTGAAGCGAGCCCTCGCGAAACAATGCGTCGT
AAGGGCGACGAATTTTCGTTGCTTGACGGGGAGACAATCACGGAACCCTT
GGTGGCAAGGAGTGTCTAGAAAGCATGAGAAAGTCGAATGAATTCAACAC
GGGTGTTCGGCTTCCTCTCCCCCGTCTCTGCTTCTTCATCTGACACATGC
TGGTTTTGAGCAGAAGACGTTAAAATAATTTCAGCTGAATAGTTTGATCA
GGTCACTCATGGTTGGCACAAAGAAGTTCCCCCGATCGCCCCTGTTGGCT
ACCACCGCCACACACACCAGCCCTGGCGGCAGCGATGGACCGCGGCAAGC
AACGGCGGCGCTCTGGCCCGGCCACGAACGCTTCATCCACCGGGGTTTCC
GAATCGAAGAGCTTCGAGCGTTGTCGATAACGACATCGATGAGGATGATG
ATTCAGTGGCGGCAGGCGTACGGGCACGAGGTACGAAAGGAGCTTCAGCT
GCCGCCGGCCCCGGCTCCGGCTGCGGAACAAGGTACGCGGAAGGACCAAG
CACTAGGATGAACCTGTTCACAGCCGTGAATGCTGGGCTTCGCACGGCGA
TGGAGACCGATGACACCGCG GTAAGGGAGCTAGCCCAACATAGGGGGCAT
GTCGGAAAGAAACGGGCATTTCGGAAAGAAACAGGCATGTCGGAAACATG
TAGTTAACACACGTAGTTTTGTTATCACAGCGTACGCTCTAGCCTATGAC
GTTCGGCACGGCGGTGGCATATGATACGCGTCGCTGATAGGACAGTGGAG
ACGCGGGCAAGCAGGTATCCAACGGATGATGGCCACACCTGGGGTTTGAC
CGAAAACAAGCTATAGCGTACACAGTACCCCGTTCAAGTGAGATTTTAGT
GTTTCTCTACGTGATAGAGTCACAATGGAGCGTTCTTTCCACAGAGTTTG
CGATTTTGGTGGGAGTGATTATTCGGCTGTTGTTGGAAAACCTCATGGGG
GGTGGCGATCTGTTCCGTGCTACCAGATAGTTTTTGGAGAAGACGTGGCC
TTCGGAGGCGTATTCCGCTGCACGGGCGGCCTCAAGGAACAGTTCGGGCC
TGACCGCGTGTTCGACAGCACCCTCTGCGAACAGGGCATTGCGGGGTTTG
CGATCGGATACGCCTCGATGGGCAAGACTGCTATCGCCGAGATTCAG GTA
CACCTTGATTGCCGCATGCCGTCCAAAAGCGAAAGCTCGGCCATCTGTCG
ACAAGTGTTTTGTCCCCGGTGCCGTGCAACTCCGGTTTTCCGTTGCTCGT
GCTACACGCGAGGTGTAGGGACGGAGGTAAACATGGAGTACTCGCGAAGC
TCATTTTGACATATCTGGGGGGAAAGCACGTTGAGCGCACGAAGCATACG
TCTTCAAGCAGCGACATACGACCCCCGCTCTCTGTACGTTTTGTGCTTTT
GCACCCGCTAGCAATATTTTCCCCTATTTTTCCCTCAATATTGTCTTACA
TCGGTTTTCGTTCATGGTACATACATGTATGGCGCCTGCTCCCGCATGCC
ATCTCCCGCCAACGCCACTGACATACAACACAAACCTTTTTTCTCCCCCC
TCACGCCGCACCGCGATGGTCGACACCACCCCAACGCGCCTCATCCCTCT
CTCCGTGTCTGTTTTGTTTCCACGCTCTCGCTGGCCTTGTGCAGTTCGCA
GACTACATTTTTCCGGCCTTTGATCAG GTGGGAGTTGAAAACAGCACCGA
GGAGTATGGCATGCGCATGAACCCATCGTGCCTTGCGTGAAGTCGGTTGT
CACCTGTCTATTCTCGATATCCTCGATGCGATTTCACGATCTCGAAGGGC
ATTTCGGGGGTGGAGAGTATCCGTGATGTGGTCTGCATCAGCGCATTGAA
ATTGCAGATGTTTTCTCCCACGACATGCTTCCCGTCTCTCACCGCCCCCC
ACGTACATTTGGTGCGATTCTCGTCCAGATTGTAAACGAAGCTGCCAAGT
TTCGGTACCGGTCGGGCGACCAGTTCAACTGCGGAGGGCTCACCATCCGT
GCCCCGTGCGGTGCCGTGGGCCACGGAGGGCACTACCACTCACAATCTCC
GGAGAGCTACTTCGCGCACACGCCGGGACTGAAG GTACGAGTGGCGAGCC
CCGTTGTTTATGGTGATCGGCACATTTTCCCCCACGTCGTCGCCAGCGTT
CTAAGTCACGCCTATGTGGATGAAAACGTGTGCGCGTGAACGGTTGCGAC
TCACGATGGTCCTGCGAGGTCACTGATCGCCCTATTCAGAACTTAGTTGC
GGGGATACTCCTGCCTGCGAGCAAACATTTCCCGGATATTGGCGGTGGCG
ATATCAAGAAAAGCCGTGGGTCTGTAGAGTTGAGGCCGCAGCCATCTTCA
TCCGTTTCGCCTTCGTCTGTTTGGTTCGTGTTTTATGCATTTTGCCCTGG
GTTATTGTTGTGGATAGGTGGCTATGCCCAACTTTGCTTTTCTTTCGCAA
TCTGATATTCTGGCTGATCGGTGTTTTCGTGGTTAGGTGGTTATGCCCAG
AAACGCGACGGAGGCGAAAGGCTTGCTGCTGGCCTCGGTGAGGGAGCCGG
ATCCGGTAATCTTCTTCGAGCCGAAGATCCTCTACCGCACCAGCGTCGAG
GACGTGCCCGACGGCGACTACGAGGTGCCACTTGGGGTGGCGGACGTGAT
GAGGGAGGGGACCGACGTGACCTTG GTGAGAGGGGCGCAGAGGCGGGTAG
AAAGAGAGATAGCAAGATACAGCAGAGCTAGCTACAAGAGGGAGGGCGAT
GAAGACACAGAAACAGACAGACATCAGATGCAAACACCGAGAGGAAAATC
TACAGAGGAATATCGCGACAGGAAGATAGGTACATGTACATCGATGTGCA
TATGAATAGATAGAAGCAAAGCCAGGCATTGAGTCGCGGTTGCGGGCCGG
CGTTTGTCGTTCCGGAGCTAGTTTCGCTTGGCGCCGAGAGGTGTTTGACG
TGTCTACGGGGTTGGATAATCCCATGAGACACTTTCGGCACGATGGTGAT
CGTGGAAGCTCGATGTCGCGAAGATTGCCGAGTCAGACGGGATTATTTCC
TTTCGCTTTGGAACACATCCAAGGAGACGGAGCACTCTTCCACACGTTCC
TAGTGAACTACGGAAACGCGTACTTCATGTGCCACACATAAGATCCGGCT
ACCCGAGCTGTGGCAGTCGTCCCAAGGGAGAAAGTGGTCCTCGTGGGCGT
TCGTTGACACCAAGCGATCCACGATTTTCTGCTCGGAGCGCGAGGCGGAT
CTCATCCTCTGCACTCAAGCGAGGCGGATCTCATCCTCTGCACTCAACCG
CTATTGCCCAAATATGCTTGGACTTGTGCAAAAACAACTGTCACTGAGCA
CCAACTTGTGGTTTGCTGCAAGTCAGGCGTGGTGTTTGTTTCGCTTTCTT
TCGGTCCTTCTGTGTTCGTGTCTCTTGCTCGTGTTTGTCTCTCGTACCGC
TATCTGACTTTCTGCGCCGTTCTGTCTGCCTGTCTGTCTGCCTGTCTGTC
TGCTTCCGTGCCTGTTTTTCTCTTTCTCCCTCTCTCTCTGTCTCTCCCTC
TGTCTGCCTGTCTGCCTCTCCCTCTCTTTCGGTCTCTGTCTCTGTCTCTT
TCTCTCTACCGCTTCGATGATGGCCAGGTCGGATGGGGGGCTCAGCTACG
AGTGATGTCCGAAGCGTGCGACGACGCGGAGAAGGAGGGCATCAGCTGCG
AGCTAATCGACCTCCG GTGCGTCAATCCCGTTCTTCGTAGCCTCGGCCGA
TCCGATCGGGAGTGAAGGCCTTCCCTCCGCCCGAAAATCTCGTTAGGGGG
CAACACCAGCCGTGTTTCGCGCTACTACCGTAGGTTGCAGTGGATGTCAC
ACCCCCCGTACTGATTTTCGAAGCTCGAGTCCTCTGCTGCAGAAACCGTC
ACGATTGCGTCGGTCGAACCGTCTCGTCGAGAGCTTCCCGAAAACGTGGC
ACTTGATTGTGGCATCTTCTTCAAAGTGGAGAAACCGAGCTTTCAAAATC
TTGCGCAACCTACGGTGACCCCTGCGACATCCGGTATCTCTGATGGCTAG
AGACGTGTCCCCTTCTGATGCGTTTCTTGTCGTCCGTCCCTTTGCCCGTT
TGTTTCCTCGCCTACCCCCAACACACAATAAATACGAACAGCACGATTCT
CCCGTGGGATTTCGACACGGTGAGCCGTTCGGTCAAGAAGACGGGGAGGC
TAGTGGTATCCCACGAGGCGCCAAGGACCGGGGGTTTTGCGGCTGAAGTT
GCCGCGGATATGCAG GTGGGCGCGAGCCTCTACTACTACTAGTTAATCTT
TTTCTCGCGCACCGCGAGGTTTTCGTGCTGACGTGCCGCCCCCTTGTCGC
GTTTTACCAGTGGTCCTAAATCGCAACACTGAACGGTGTTGAAGTATCCA
TACCTGAGCGCTGCTTTGGCCTTTTGACAATGTTTGTCGCTCGACCACGC
CGTGTAGAACTACAGGACCCGGGTACACACGAACGGCACAACGATGGCGG
CAGACTTCCGTTGCCTTCATGATTCGAGCACCCATGCATGCGCTGCTCGC
GTTCTACCCTCATCTGTGTCGCGCGCCCCGTGATGCAGGAGCGATGTTTT
CTACACCTGGAGGCACCGGTGCAACGGGTGTGCGGGTACGACACCCCCTT
CCCCCTCGTGTTCGAGAAGTTTTACGTGCCCGGCCGGTTTAAGGTTCTCG
ACGCTATCCGCGACGCCGTGAACTACTAA GAGTAGGAGAGCTGCACGCCA
GCGTGTGATCCATCGCCAGCGTTTTACGTGCGCGATACCCGCAACGGTGA
CTAAGTGCCAGGTGTATATCTTGTTGCTGGACTCTGGGAAGATCAGCGTG
TACTTTCTGGGATTTAGGCGAGGCCCTTGTGCTTGGATCGGCGACACTGG
AATCGTCGTGATGTGTACATACATTGCAGTGAAGGTGGCAATCACATACG
ATGCCGCCGTCATCGAGGATACTGTGTAGCATGCCTGGGCTTGTACAATG
TGCATGGGGTTTCTAAGTAAACGAGGGTCGTGCAAGCATTATGTGTGATT
CAAAAGTACGTTCGGTCTACATACTGTAAATACGATTTCGGGCATGGGCT
AACGCAGCACCCGGTGCATCGCGAAGCAACAAAGTTCCATCGTCATGAAA
TGGCGTGCTCCTGTTACCGATTGCAATGGTCGTGCCCACATGCCAGTAAA
GCAGAAGGAGAACGATGGGCAGCTGGGAACTGCGCGCCGGGTGAAGTTTC
TCTTGCATGGAAGAAAATCTTTCAAGGCACATGCAAGATTTCGTGATTTC
GTGGGGCGGGGGGATGTCGTGGTACTACAAAGGAAGTGTATGTTCGGCAG
TGGTGGTGTGTACGTAAAAAAGCGTCGTCGTTACAACTGCCGCCGGCTGC
TCAATTGCCGCGCCAATCTCACGACCCCGTTTGCCATC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:625373..632010+
>mRNA_E-siliculosus-1a_M_contig97.17680.1 ID=mRNA_E-siliculosus-1a_M_contig97.17680.1|Name=mRNA_E-siliculosus-1a_M_contig97.17680.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2724bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:625373..632010+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male) ATGTCGCCCAGTGTTGCAAGGTGCCCTCGATCCCTAGCAGCGGGTTCCGC CGGCCTGAGGAATACCGTTCTCAGCGCCGCCAGCGCTAGCGCCACCGGAT CGAGGATGAGGAGCGCCTCGGACAGCTTGCTACTTCGACCGCCTCGCTGC AATCGGGAGATGTCGCCCAGTGTTGCAAGGTGCCCTCGATCCCTAGCAGC GGGTTCCGCCGGCCTGAGGAATACCGTTCTCAGCGCCGCCAGCGCTAGCG CCACCGGATCGAGGATGAGGAGCGCCTCGGACAGCTTGCTACTTCGACCG CCTCGCTGCAATCGGGAGCCCTGGCGGCAGCGATGGACCGCGGCAAGCAA CGGCGGCGCTCTGGCCCGGCCACGAACGCTTCATCCACCGGGGTTTCCGA ATCGAAGAGCTTCGAGCGTTGTCGATAACGACATCGATGAGGATGATGAT TCAGTGGCGGCAGGCGTACGGGCACGAGGTACGAAAGGAGCTTCAGCTGC CGCCGGCCCCGGCTCCGGCTGCGGAACAAGGTACGCGGAAGGACCAAGCA CTAGGATGAACCTGTTCACAGCCGTGAATGCTGGGCTTCGCACGGCGATG GAGACCGATGACACCGCGCCCTGGCGGCAGCGATGGACCGCGGCAAGCAA CGGCGGCGCTCTGGCCCGGCCACGAACGCTTCATCCACCGGGGTTTCCGA ATCGAAGAGCTTCGAGCGTTGTCGATAACGACATCGATGAGGATGATGAT TCAGTGGCGGCAGGCGTACGGGCACGAGGTACGAAAGGAGCTTCAGCTGC CGCCGGCCCCGGCTCCGGCTGCGGAACAAGGTACGCGGAAGGACCAAGCA CTAGGATGAACCTGTTCACAGCCGTGAATGCTGGGCTTCGCACGGCGATG GAGACCGATGACACCGCGATAGTTTTTGGAGAAGACGTGGCCTTCGGAGG CGTATTCCGCTGCACGGGCGGCCTCAAGGAACAGTTCGGGCCTGACCGCG TGTTCGACAGCACCCTCTGCGAACAGGGCATTGCGGGGTTTGCGATCGGA TACGCCTCGATGGGCAAGACTGCTATCGCCGAGATTCAGATAGTTTTTGG AGAAGACGTGGCCTTCGGAGGCGTATTCCGCTGCACGGGCGGCCTCAAGG AACAGTTCGGGCCTGACCGCGTGTTCGACAGCACCCTCTGCGAACAGGGC ATTGCGGGGTTTGCGATCGGATACGCCTCGATGGGCAAGACTGCTATCGC CGAGATTCAGTTCGCAGACTACATTTTTCCGGCCTTTGATCAGTTCGCAG ACTACATTTTTCCGGCCTTTGATCAGATTGTAAACGAAGCTGCCAAGTTT CGGTACCGGTCGGGCGACCAGTTCAACTGCGGAGGGCTCACCATCCGTGC CCCGTGCGGTGCCGTGGGCCACGGAGGGCACTACCACTCACAATCTCCGG AGAGCTACTTCGCGCACACGCCGGGACTGAAGATTGTAAACGAAGCTGCC AAGTTTCGGTACCGGTCGGGCGACCAGTTCAACTGCGGAGGGCTCACCAT CCGTGCCCCGTGCGGTGCCGTGGGCCACGGAGGGCACTACCACTCACAAT CTCCGGAGAGCTACTTCGCGCACACGCCGGGACTGAAGGTGGTTATGCCC AGAAACGCGACGGAGGCGAAAGGCTTGCTGCTGGCCTCGGTGAGGGAGCC GGATCCGGTAATCTTCTTCGAGCCGAAGATCCTCTACCGCACCAGCGTCG AGGACGTGCCCGACGGCGACTACGAGGTGCCACTTGGGGTGGCGGACGTG ATGAGGGAGGGGACCGACGTGACCTTGGTGGTTATGCCCAGAAACGCGAC GGAGGCGAAAGGCTTGCTGCTGGCCTCGGTGAGGGAGCCGGATCCGGTAA TCTTCTTCGAGCCGAAGATCCTCTACCGCACCAGCGTCGAGGACGTGCCC GACGGCGACTACGAGGTGCCACTTGGGGTGGCGGACGTGATGAGGGAGGG GACCGACGTGACCTTGGTCGGATGGGGGGCTCAGCTACGAGTGATGTCCG AAGCGTGCGACGACGCGGAGAAGGAGGGCATCAGCTGCGAGCTAATCGAC CTCCGGTCGGATGGGGGGCTCAGCTACGAGTGATGTCCGAAGCGTGCGAC GACGCGGAGAAGGAGGGCATCAGCTGCGAGCTAATCGACCTCCGCACGAT TCTCCCGTGGGATTTCGACACGGTGAGCCGTTCGGTCAAGAAGACGGGGA GGCTAGTGGTATCCCACGAGGCGCCAAGGACCGGGGGTTTTGCGGCTGAA GTTGCCGCGGATATGCAGCACGATTCTCCCGTGGGATTTCGACACGGTGA GCCGTTCGGTCAAGAAGACGGGGAGGCTAGTGGTATCCCACGAGGCGCCA AGGACCGGGGGTTTTGCGGCTGAAGTTGCCGCGGATATGCAGGAGCGATG TTTTCTACACCTGGAGGCACCGGTGCAACGGGTGTGCGGGTACGACACCC CCTTCCCCCTCGTGTTCGAGAAGTTTTACGTGCCCGGCCGGTTTAAGGTT CTCGACGCTATCCGCGACGCCGTGAACTACTAAGAGCGATGTTTTCTACA CCTGGAGGCACCGGTGCAACGGGTGTGCGGGTACGACACCCCCTTCCCCC TCGTGTTCGAGAAGTTTTACGTGCCCGGCCGGTTTAAGGTTCTCGACGCT ATCCGCGACGCCGTGAACTACTAA back to top