mRNA_E-siliculosus-1a_M_contig97.17678.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig97.17678.1
Unique NamemRNA_E-siliculosus-1a_M_contig97.17678.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17678.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 7.040e-77
Identity = 160/292 (54.79%), Postives = 193/292 (66.10%), Query Frame = 3 
Query:  693 IEQLLAAGADHSIRTITHISPLEILATRGDATILKAFLDTDS-HVNATDCPGLSVLHHAACVDGPVRDNSDAVRALLDAGADVNAKSGDNGDCTPPHVAVDRRMSSICTIXXXXXXXXXXXXXXGYDHTPLHVACMCFNVSGVELLLRWGADEMLKDDDGSTPADVMGEMGDGDLTDEEIETDHQRIRHVLARAPADRSWRRRGWLVLSRCCPTRVHIANRGSSSGS--------NGNSNSCCLKVARVSGKESREDDEETEDKIMSDWKDLVRRLVGLEVDGLFRLVVDFL 1541
            +++LLAAGA++S+RT    SPLEI A RG A ++KA LD DS  V+ATD  G + LH+AA +DGPVRDN DAVR LL AGADV+AK   +   T  ++AV+RR++S  TI              G D TPLHVAC   +  GVELLLRWGAD+ L  + G TPA V+  +   DL DEE+E D+QRIR +LAR PA RSWRRRGWLVLSR CPTRV IAN  S            NGNS     KVA+VSG+ S  DDEET D +M D +DLV RL+ LE DG+FRLVV FL
Sbjct:  189 VQELLAAGANYSLRTNGSRSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEELEADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXNGNS----AKVAKVSGESSSRDDEETADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17678.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 1.300e-75
Identity = 154/265 (58.11%), Postives = 176/265 (66.42%), Query Frame = 3 
Query:  750 SPLEILATRGDATILKAFLDT-DSHVNATDCPGLSVLHHAACVDGPVRDNSDAVRALLDAGADVNAKSGDNGDCTPPHVAVDRRMSSICTIXXXXXXXXXXXXXXGYDHTPLHVACMCFNVSGVELLLRWGADEMLKDDDGSTPADVMGEMGDGDLTDEEIETDHQRIRHVLARAPADRSWRRRGWLVLSRCCPTRVHIANRGSSSGSNGNSNSCCLKVARVSGKESREDDEETEDKIMSDWKDLVRRLVGLEVDGLFRLVVDFL 1541
            SPLEI A RG A +LKA LD   S V+  +  G + LH+ A  D  VRD  DAVR LL AGADVN K  ++   TP H+AV+R M+S  TI                D TPLH+AC     S VELLLRWGADE L ++DG TPADV+G +   DL DEE E D+QRI  +LARAPADRSWRRRGWLVLSR CPTRVHIAN  SSS S    N    KVARVSG+ S  DDEETED++M D +DLV RLVGLE +GLFRLVV FL
Sbjct:  247 SPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17678.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 3.490e-67
Identity = 140/244 (57.38%), Postives = 164/244 (67.21%), Query Frame = 3 
Query:  813 DSHVNATDCPGLSVLHHAACVDGPVRDNSDAVRALLDAGADVNAKSGDNGDCTPPHVAVDRRMSSICTIXXXXXXXXXXXXXXGYDHTPLHVACMCFNVSGVELLLRWGADEMLKDDDGSTPADVMGEMGDGDLTDEEIETDHQRIRHVLARAPADRSWRRRGWLVLSRCCPTRVHIANRGSSSGS-NGNSNSCCLKVARVSGKESREDDEETEDKIMSDWKDLVRRLVGLEVDGLFRLVVDFL 1541
            +S VNAT+  GL+ LH+AA V GPV D  DAVR LL AG DVN  +  +   TP HVAVD R++S  TI               +D TPLH+AC   +VSGVELLLRWGADE L ++ G  PADV+     GDL DEE + D+QRI  +L RAPADRSWRRRGWLVLSR CPTRV I N  SS GS NGNS     KVA +SG+++   DEETED+IM+D +DLV  LVGLE D LFRLVV FL
Sbjct:   32 NSDVNATNDLGLAALHYAASVVGPVHDKGDAVRVLLGAGVDVNVNTTTDSCFTPLHVAVDGRIASDGTIRALLEGADVDSRAR-HDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRARQQGDLDDEEHDADNQRICRMLTRAPADRSWRRRGWLVLSRYCPTRVQIDNGSSSRGSYNGNS----AKVATLSGEDTGRGDEETEDRIMADLRDLVDWLVGLEADSLFRLVVAFL 270
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17678.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 3.400e-65
Identity = 145/257 (56.42%), Postives = 169/257 (65.76%), Query Frame = 3 
Query:  786 TILKAFLDTD-SHVNATDCPGLSVLHHAACVDGPVRDNSDAVRALLDAGADVNAKSGDNG-DCTPPHVAVDRRMSSICTIXXXXXXXXXXXXXXGYDHTPLHVACMCFNVSGVELLLRWGADEMLKDDDGSTPADVMGEMGDGDLTDEEIETDHQRIRHVLARAPADRSWRRRGWLVLSRCCPTRVHIANR---GSSSGSNGNSNSCCLKVARVSGKESREDDEETEDKIMSDWKDLVRRLVGLEVDGLFRLVVDFL 1541
            TI+KAFLDTD S VNATD  G + LHHAA ++   RD  DAVR LL AGADV+AK+ D+   C P H+AV  R+ S  TI                D TPLH AC   +V+ VELLLRWGADE L DD   TPAD++G  GD      +IE D QRI  +LARAPADRSWRRR WLVLSR CPTRV IAN    GSS GS+ +SN    K+AR SG++S   + ETED++M D + LV RLVGLE DGLFRLVV FL
Sbjct:  257 TIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSSSNGNSTKLARFSGEDSGGGERETEDQMMVDLRGLVTRLVGLEADGLFRLVVGFL 513
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17678.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 7.960e-61
Identity = 130/241 (53.94%), Postives = 159/241 (65.98%), Query Frame = 3 
Query:  822 VNATDCPGLSVLHHAACVDGPVRDNSDAVRALLDAGADVNAKSG-DNGDCTPPHVAVDRRMSSICTIXXXXXXXXXXXXXXGYDHTPLHVACMCFNVSGVELLLRWGADEMLKDDDGSTPADVMGEMGDGDLTDEEIETDHQRIRHVLARAPADRSWRRRGWLVLSRCCPTRVHIANRGSSSGSNGNSNSCCLKVARVSGKESREDDEETEDKIMSDWKDLVRRLVGLEVDGLFRLVVDFL 1541
            V+  D  G + +H A    GP+ DN   VR LL+AG  VNA++G D    TP H AV+RR++SI T                +  TPLHVACM  NV+ VELLLRWGADE   +D+G  PADV+G    GD+ DE+++ DH+RIR +LARAPADRSWRRRGWLVLSR CPTRV IAN+GS      N NSC  KVARVSG++   D+EE E+++  DW  LV  L+GLE DGLFRLVV FL
Sbjct:  269 VDTGDDQGYTAIHCAVNRHGPL-DNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRV----NRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17678.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 6.980e-59
Identity = 159/294 (54.08%), Postives = 192/294 (65.31%), Query Frame = 3 
Query:  693 IEQLLAAGADHSIRTI----THISPLEILATRGDATILKAFLDTDSHVNATDCPGLSVLHHAACVDGPVRDNSDAVRALLDAGADVNAKSGDNGDCTPPHVAVDRRMSSICTIXXXXXXXXXXXXXXGYDHTPLHVACMCFNVSGVELLLRWGADEMLKDDDGSTPADVMGEMGDGDLTDEEIETDHQRIRHVLARAPADRSWRRRGWLVLSRCCPTRVHIANRGSSSGS-----------NGNSNSCCLKVARVSGKESREDDEETEDKIMSDWKDLVRRLVGLEVDGLFRLV 1529
            +++LLAAGA+  +R +    +H S L++ A RG A +L A LD D+            +  A  VDGPV DN DAVRALL  GADVNAK+ D+   +P H+AVDRR++S   IXXXXXXXXXXXXXXG D+ PLH+AC   +V GVELLLRWGADE L +  G TPADV+  +  GDL D+E E D QRI  ++A  PADRSWRRRGWLVLSR CPTRV IAN  S               NGN+     KVARVSG+ S  DDE TE  ++ D ++LV RLVGLE DGL RLV
Sbjct:  199 VQELLAAGANCGLRCMLTNGSH-SSLDMAAGRGHADVLTALLDKDN------------IFFAMSVDGPVHDNGDAVRALLGVGADVNAKTTDSICASPLHLAVDRRIASDGMIXXXXXXXXXXXXXXGDDNKPLHLACRHSSVHGVELLLRWGADEKLTNSVGKTPADVIRALQQGDLDDKEREADDQRIGRMVALVPADRSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXXRINGNA----AKVARVSGESSSRDDERTEGDMIVDLRNLVGRLVGLEADGLLRLV 475
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17678.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 3.590e-58
Identity = 149/258 (57.75%), Postives = 178/258 (68.99%), Query Frame = 3 
Query:  777 GDATILKAFLDTDSHVNATDCPGLSVLHHAACVDGPVRDNSDAVRALLDAGADVNAKSGDNGDC-TPPHVAVDRRMSSICTIXXXXXXXXXXXXXXGYDHTPLHVACMCFNVSGVELLLRWGADEMLKDDDGSTPADVMGEMGDGDLTDEEIETDHQRIRHVLARAPADRSWRRRGWLVLSRCCPTRVHIANRGSSSGSNGNSNSCCLKVARVSGKESREDDEETEDKIMSDWKDLVRRLVGLEVDGLFRLVVDFL*G 1547
            G ATI+KAFL+T   V+ TD    +VLH AA +DG V      V  LL+AGADVNAK+  N    TP H+AVDRR+SSI TI  XXXXXXXXXXX   + TPLHVAC   N + V+LLL WGAD    + +G  PADV+    +  L DE IE DH+ +R +LARAPAD+SWRR GWLVLSR  PTRV I NRG S    G+SNSC  K+ARVSGK+S  DDE  E+++M DW+ L+ RLVGLE DGLFRL+V FL G
Sbjct:  230 GHATIVKAFLETGIDVDTTDDQAYTVLHRAADMDGCV------VHVLLEAGADVNAKTDQNSFLYTPLHLAVDRRVSSIRTIRAXXXXXXXXXXXSEDNDTPLHVACTYSNAAVVKLLLCWGADGTCSNGNGHVPADVIRAHDEDGLDDEHIEADHKHVRRMLARAPADKSWRRHGWLVLSRSGPTRVQIGNRGGS----GSSNSCSTKLARVSGKDSSRDDE-LENQMMVDWRVLLDRLVGLEADGLFRLMVGFLCG 476
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17678.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 1.970e-57
Identity = 131/260 (50.38%), Postives = 160/260 (61.54%), Query Frame = 3 
Query:  816 SHVNATDCPGLSVLHHAAC-VDGPVRDNSDAVRALLDAGADVNAKSGDNGDC-TPPHVAVDRRMSSICTIXXXXXXXXXXXXXXGYDHTPLHVACMCFNVSGVELLLRWGADEMLKDDDGSTPA------------DVMGEMGDGDLTDEEIETDHQRIRHVLARAPADRSWRRRGWLVLSRCCPTRVHIANRGSSS----GSNGNSNSCCLKVARVSGKESREDDEETEDKIMSDWKDLVRRLVGLEVDGLFRLVVDFL 1541
            S V+ATD  G + LH   C ++ PV DN D VR LL+AGADV+AK+  +G+C TP H AV+RR++ I  I               +D TPLHVAC   +V+GVE LL WGADE L D DG TPA            DV    G+    DE IE D  RIR +LARAPADRSW RR WLVLSR CPT+V I+N  SSS    GS+G+  S   ++  V+ K+   DD+ETED+   +W+DLV RLVGLE D LFRLVV FL
Sbjct:   10 SEVHATDDGGYTALHCCVCDINEPVLDNGDTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPAGAIVDSEEETPPDVTDAPGENRGKDEAIEADQHRIRQMLARAPADRSWHRRRWLVLSRSCPTKVQISNTSSSSNISSGSSGDGLSA--EMVSVNCKDLGGDDKETEDQKTVNWRDLVVRLVGLEADVLFRLVVGFL 267
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17678.1 vs. uniprot
Match: A0A6H5JB39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB39_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 7.630e-56
Identity = 137/203 (67.49%), Postives = 150/203 (73.89%), Query Frame = 3 
Query:  816 SHVNATDCPGLSVLHHAACVDGPVRDNSDAVRALLDAGADVNAKSG---DNGDCTPPHVAVDRRMSSICTIXXXXXXXXXXXXXXGYDHTPLHVACMCFNVSGVELLLRWGADEMLKDDDGSTPADVMGEMGDGDLTDEEIETDHQRIRHVLARAPADRSWRRRGWLVLSRCCPTRVHIANRGSSSGSNGNSNSCCLKVARVS 1415
            S V+ATD  G + LH AA  D PV DN DAVRALL+AGADVN K+     +   TP HVAV R M+SICTIXXXXXXXXXXXXXX  + TPLHVACM  ++SGVELLLRWGADEMLK +   TPADV+G  GD D  DEEIE D+QRIR VLARA ADRSW RR WLVLSR CPTRVHIA R SSS S  +S     KVARVS
Sbjct:  190 SRVDATDNRGWTALHCAAYFDRPVHDNGDAVRALLEAGADVNVKNDAHVSDDIFTPLHVAVSRPMASICTIXXXXXXXXXXXXXXXCNQTPLHVACMWGDLSGVELLLRWGADEMLKKNRVDTPADVIGVWGDEDRNDEEIEADNQRIRPVLARAAADRSWHRRDWLVLSRSCPTRVHIACRSSSSSSGSSS-----KVARVS 387
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig97.17678.1 vs. uniprot
Match: D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 7.580e-54
Identity = 116/214 (54.21%), Postives = 138/214 (64.49%), Query Frame = 3 
Query:  711 AGADHSIRTI-THISPLEILATRGDATILKAFLDTDS-HVNATDCPGLSVLHHAACVDGPVRDNSDAVRALLDAGADVNAKSGDNGDCTPPHVAVDRRMSSICTIXXXXXXXXXXXXXXGYDHTPLHVACMCFNVSGVELLLRWGADEMLKDDDGSTPADVMGEMGDGDLTDEEI-ETDHQRIRHVLARAPADRSWRRRGWLVLSRCCPTRVHI 1343
            A A++ +RT  T  SPLEI A  G A +LKA LD DS  ++ TD  G + LH+AA VDGPVRDN DAVR LL AGADVN  + ++   TP H+AV+ R  S  T+                D TPLH+AC   +V+GVELLLRWGADE L ++ G TPADV+      D  DEE  E D+QRIR +L  APADRSWRRRGWLVLSR CPTRV I
Sbjct:   71 ACANYGLRTEGTRCSPLEIAAHGGHADVLKALLDKDSSQLDDTDGEGWAALHYAAVVDGPVRDNGDAVRVLLGAGADVNETNNNDSCFTPLHIAVNGRKVSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADEKLTNNVGKTPADVIRPRRQNDFDDEEEREADNQRIRRMLEHAPADRSWRRRGWLVLSRSCPTRVEI 284
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L812_9PHAE7.040e-7754.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQN0_ECTSI1.300e-7558.11Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
A0A6H5JXF0_9PHAE3.490e-6757.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD22_ECTSI3.400e-6556.42MHC_I C-terminus family protein n=1 Tax=Ectocarpus... [more]
D8LB27_ECTSI7.960e-6153.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7E1_9PHAE6.980e-5954.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHY5_9PHAE3.590e-5857.75Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5K6K9_9PHAE1.970e-5750.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB39_9PHAE7.630e-5667.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQI9_ECTSI7.580e-5454.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig97contigE-siliculosus-1a_M_contig97:613557..616897 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1017
Model size2531
Exons2
Hectar predicted targeting categorysignal peptide
BRITEko00000,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.G
EggNOG OGsCOG0666@1,KOG4177@2759
EggNOG free text desc.response to abiotic stimulus
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
KEGG koko:K21440
Seed eggNOG ortholog2880.D8LQN0
Seed ortholog evalue6.7e-70
Seed ortholog score271.2
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig97.17678.1prot_E-siliculosus-1a_M_contig97.17678.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig97 614084..615100 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936555.4117756-UTR-E-siliculosus-1a_M_contig97:613556..6140831622936555.4117756-UTR-E-siliculosus-1a_M_contig97:613556..614083Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig97 613557..614083 +
1696251128.9339607-UTR-E-siliculosus-1a_M_contig97:613556..6140831696251128.9339607-UTR-E-siliculosus-1a_M_contig97:613556..614083Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig97 613557..614083 +
1622936555.4583473-UTR-E-siliculosus-1a_M_contig97:615100..6151011622936555.4583473-UTR-E-siliculosus-1a_M_contig97:615100..615101Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig97 615101..615101 +
1696251128.9609764-UTR-E-siliculosus-1a_M_contig97:615100..6151011696251128.9609764-UTR-E-siliculosus-1a_M_contig97:615100..615101Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig97 615101..615101 +
1622936555.4746194-UTR-E-siliculosus-1a_M_contig97:615911..6168971622936555.4746194-UTR-E-siliculosus-1a_M_contig97:615911..616897Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig97 615912..616897 +
1696251128.9729428-UTR-E-siliculosus-1a_M_contig97:615911..6168971696251128.9729428-UTR-E-siliculosus-1a_M_contig97:615911..616897Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig97 615912..616897 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936555.4394877-CDS-E-siliculosus-1a_M_contig97:614083..6151001622936555.4394877-CDS-E-siliculosus-1a_M_contig97:614083..615100Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 614084..615100 +
1696251128.9449608-CDS-E-siliculosus-1a_M_contig97:614083..6151001696251128.9449608-CDS-E-siliculosus-1a_M_contig97:614083..615100Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 614084..615100 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig97.17678.1

>prot_E-siliculosus-1a_M_contig97.17678.1 ID=prot_E-siliculosus-1a_M_contig97.17678.1|Name=mRNA_E-siliculosus-1a_M_contig97.17678.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=339bp
MRRSNSRRLLSTLLPPRVMSCASPSSCWGVQTRTSSMLEVKRHCSRQQQT
TTSGLIEQLLAAGADHSIRTITHISPLEILATRGDATILKAFLDTDSHVN
ATDCPGLSVLHHAACVDGPVRDNSDAVRALLDAGADVNAKSGDNGDCTPP
HVAVDRRMSSICTIRALLEGGADVNVRNGYDHTPLHVACMCFNVSGVELL
LRWGADEMLKDDDGSTPADVMGEMGDGDLTDEEIETDHQRIRHVLARAPA
DRSWRRRGWLVLSRCCPTRVHIANRGSSSGSNGNSNSCCLKVARVSGKES
REDDEETEDKIMSDWKDLVRRLVGLEVDGLFRLVVDFL*
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mRNA from alignment at E-siliculosus-1a_M_contig97:613557..616897+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig97.17678.1 ID=mRNA_E-siliculosus-1a_M_contig97.17678.1|Name=mRNA_E-siliculosus-1a_M_contig97.17678.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3341bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:613557..616897+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATTCAATAGTAAAGAATGCGACGTGCATAAGCGCCGAGGAACGATCCGGT
TTGCGCAGATGCCAGCTTCACAATCTGACCGATCACGTGTTGACGGCTTC
GAGATGGAGATCTTCAAACTCGTCCAGGAGGGAGCGACGTCGGAGCAATG
GAAGGAGTGGCTTCGAGCACCTCTGGAGCATACCGCAGCCAAAGGAAACC
TTGATCTGTTCACACGGTTGATGGACGGTGGTGCTGATGGTAGCGCAGCC
TGGCGGGGATGCCATGGACGCACGCTGCTGGGTGCGGCTGCATGCGGCAA
TGAAAGCGACAAGAAGGGTGATGTAAACGTCCTGTTCGGGGCTAAACGCG
AATCCGCTCTCCACGTTGCGGCAGCGCGGGGAGCAGAGGAGGCCTCGAAG
GCGCTCATCATGGCCGGGGCAGACCCAAACCTGCGTGACGGGAAGGCTTG
TTGCCCGCTCCACCTTGCCGCCGAAGCAGGGCACCACCGACTCACAGGTG
TCCTCCTTCGGAAAGGGGCCCGAGTAGATGCGGCGAAGTAATTCCAGGAG
ACTCCTCTCCACCTTGCTGCCTCCAAGGGTCATGAGCTGTGCATCTCCGA
GCTCTTGCTGGGGGGTGCAGACAAGGACTTCGTCAATGCTAGAGGTGAAA
CGCCACTGTTCAAGGCAGCAACAAACAACCACCTCGGGGCTTATTGAGCA
GCTTCTAGCTGCTGGTGCCGACCACAGCATTCGTACCATCACCCACATTT
CCCCACTCGAGATTCTTGCAACCAGAGGAGACGCGACCATCCTGAAGGCC
TTCCTTGACACAGACAGTCATGTCAATGCCACCGATTGTCCAGGACTCAG
TGTCCTTCACCATGCTGCTTGTGTTGACGGACCTGTTCGTGACAACAGCG
ATGCTGTCCGTGCACTCTTGGACGCTGGGGCCGACGTCAACGCCAAGTCT
GGGGACAACGGTGACTGCACGCCTCCCCATGTTGCCGTCGATCGTCGGAT
GTCATCGATCTGCACGATCCGCGCGTTGTTGGAGGGAGGGGCGGATGTCA
ATGTGCGTAACGGCTACGACCATACGCCGTTGCATGTAGCTTGCATGTGT
TTTAATGTTTCTGGTGTGGAGCTTCTGCTGCGTTGGGGAGCAGATGAGAT
GCTGAAGGACGACGATGGAAGCACGCCTGCAGACGTAATGGGAGAGATGG
GAGATGGCGACCTCACCGACGAAGAAATCGAGACCGACCACCAGCGCATT
CGCCACGTGCTGGCGCGCGCTCCAGCCGACAGGTCATGGCGTCGCCGCGG
CTGGCTGGTGCTGAGCCGTTGCTGCCCGACCAGAGTGCACATTGCAAACA
GAGGCAGCAGCAGCGGCAGCAACGGCAACAGCAACAGTTGCTGCCTCAAG
GTGGCGAGGGTCAGCGGCAAGGAATCGCGTGAGGATGATGAGGAGACGGA
AGACAAAATCATGTCCGACTGGAAGGATTTGGTGCGCAGGCTGGTCGGAC
TGGAGGTTGATGGCTTGTTCCGCTTGGTGGTGGACTTTCTGTGAGGTATG
CATACGAGGAGGAGAGAGTTTGGCAGTGGGATTGACTGTGATTTCGCAGC
CGTCAAAGAGGACGTGTTCTAGTGAGTAGTGTCGTGCACAAGCATGGGAC
TTGCGGAAGGAGTATTTATAGATTTATTCGCATCGTCACTCCCTTGGCCT
TGGCATACATGGGGTTGAAGCAATTTGCCCGATTTTTGTGTTGGTTTGCT
ACACGTATAAAGCGTTCGTGTGTAAATTTTCGCGCAGCGGATGGGTTAAT
AATTTCGAATTCCATGTACCGGGTAACAATCGTACTTGGGGGTGCGCAAC
GAACGGGGGTTTTGATCGGTGGCCGAACAAGATGTGTCTAGTACTATCAC
GGCCGATTCTTTGGCGGTTGGCCCGAGATCGCTTTCGTGTTTCGGCAACG
AGAGCCACCTCCTGTTGTGTCATCCTCGTGGTGTCGGTTGTGTGCTGTGA
TGTGCTCTTGACGGATGTCGAACAGCCTTCAAGGGAACACTATTGTGGTC
GTCCTTATAGCTGGGCATGCCGTACAGGAGTCTAGCGGATGCGTAAAGTG
GACCGCCCGCACAGTCTGGACTATGGTTTTTCTTTGTATCGATGTTGATT
GTTCCGCAGCGCAACACTCGCACTCCCTACCCTTTGACACCATCCACTGC
CCGGGCTGCTGCAAGAGGCATGTAGGTTCTCTGTCCTCTGATCCTCTCGC
GTGCTTGGGAAGACGGAATGATCGCACGCAATGCCGTTGATAGGTTTGTT
CTGACGAAGCCCCATCGTCTTGGTCTGCTCCTCCGTGACTACTATTGTTG
TTCAGGTTTCAAAACACAAGAGGAGGTCGAGGCGGCGTCCTTTTCTCGAG
CCTACCGTAGCCGTTTGACTCTTTGCGCCAGGTGGTGGCCACTAAACTAT
GTCGATGGTGATGATGCCGGCTGGAAAGTTGGCATAGGAGGTGTGCCAGG
ACTGAATCCTGGTAGAGAGCTGAATCTTGGTAGTCGCAAAAGGATGGAGG
CATGTGCGAGAGGGCTTTCTCTCTGTCCTACCCCGGCTTAGTTTTTGCTT
GAACGCGCCCCCAGACCCCATGGAAATCAGCTGCTGGTTTACTGCATTTG
CGAATTGTCTGTTATTCTTGTCGAGCTTTTCTTGCTCTTTTTCTGTGTCC
CCATTTCCGTTGCGCCCTTGTTTAGGACGTTCTCTCTCTTGCTTTCTCTA
GGCCCGTGTGTACAAGCGAGAGCCCCTAGTTCATCACTGAAGCGTTTTTA
CTGAAGCGTTTGACTCACATTGGTGCCGTCAGCAGCATATGAGCCAGGTA
GCCAAGACGCTAGTTGCATGTGTTGACCAAGGGGGACCAGCTGTTGTGCG
GACCCGCGCCAATCCCATGATTTTGTGGCGCACCCCCTCAAGTGGTTTGC
CGGACCTCCTGGGTAGCTTGGGGCGTACGTCGACCGTACGGTGGGCATTC
ATGCACATGACCTTTGGCGGCCGAGAGGGGCGTCGTTTGCTGAGGAACCT
CTATTTCCTCTTGTCGTACAGCAGGTATCTCCTATCTATTGTTTCTGCTG
CTGGGTCTGTCGCAAGACACGTGTAGACCGTACACGATATGAGTCTGTGG
GGGACGAGGGTGTCGAATGTAAGGTAGACACGTCGTGCTTGTGTGATACC
CGAAAGCATCGGGTATGGTAACGCTGTTTGTGGCGGATGGGGGGGGCACT
GGCTTTTCCAAGCGTGTCAAATGGGTAATAGATTATGATGTCTTGGAGGT
GCGAACACCTGGCAACCTGCTCTATGTGGATTAAGAGAGAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:613557..616897+

>mRNA_E-siliculosus-1a_M_contig97.17678.1 ID=mRNA_E-siliculosus-1a_M_contig97.17678.1|Name=mRNA_E-siliculosus-1a_M_contig97.17678.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2034bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:613557..616897+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCGGCGAAGTAATTCCAGGAGACTCCTCTCCACCTTGCTGCCTCCAAG
GGTCATGAGCTGTGCATCTCCGAGCTCTTGCTGGGGGGTGCAGACAAGGA
CTTCGTCAATGCTAGAGGTGAAACGCCACTGTTCAAGGCAGCAACAAACA
ACCACCTCGGGGCTTATTGAGCAGCTTCTAGCTGCTGGTGCCGACCACAG
CATTCGTACCATCACCCACATTTCCCCACTCGAGATTCTTGCAACCAGAG
GAGACGCGACCATCCTGAAGGCCTTCCTTGACACAGACAGTCATGTCAAT
GCCACCGATTGTCCAGGACTCAGTGTCCTTCACCATGCTGCTTGTGTTGA
CGGACCTGTTCGTGACAACAGCGATGCTGTCCGTGCACTCTTGGACGCTG
GGGCCGACGTCAACGCCAAGTCTGGGGACAACGGTGACTGCACGCCTCCC
CATGTTGCCGTCGATCGTCGGATGTCATCGATCTGCACGATCCGCGCGTT
GTTGGAGGGAGGGGCGGATGTCAATGTGCGTAACGGCTACGACCATACGC
CGTTGCATGTAGCTTGCATGTGTTTTAATGTTTCTGGTGTGGAGCTTCTG
CTGCGTTGGGGAGCAGATGAGATGCTGAAGGACGACGATGGAAGCACGCC
TGCAGACGTAATGGGAGAGATGGGAGATGGCGACCTCACCGACGAAGAAA
TCGAGACCGACCACCAGCGCATTCGCCACGTGCTGGCGCGCGCTCCAGCC
GACAGGTCATGGCGTCGCCGCGGCTGGCTGGTGCTGAGCCGTTGCTGCCC
GACCAGAGTGCACATTGCAAACAGAGGCAGCAGCAGCGGCAGCAACGGCA
ACAGCAACAGTTGCTGCCTCAAGGTGGCGAGGGTCAGCGGCAAGGAATCG
CGTGAGGATGATGAGGAGACGGAAGACAAAATCATGTCCGACTGGAAGGA
TTTGGTGCGCAGGCTGGTCGGACTGGAGGTTGATGGCTTGTTCCGCTTGG
TGGTGGACTTTCTGTGAATGCGGCGAAGTAATTCCAGGAGACTCCTCTCC
ACCTTGCTGCCTCCAAGGGTCATGAGCTGTGCATCTCCGAGCTCTTGCTG
GGGGGTGCAGACAAGGACTTCGTCAATGCTAGAGGTGAAACGCCACTGTT
CAAGGCAGCAACAAACAACCACCTCGGGGCTTATTGAGCAGCTTCTAGCT
GCTGGTGCCGACCACAGCATTCGTACCATCACCCACATTTCCCCACTCGA
GATTCTTGCAACCAGAGGAGACGCGACCATCCTGAAGGCCTTCCTTGACA
CAGACAGTCATGTCAATGCCACCGATTGTCCAGGACTCAGTGTCCTTCAC
CATGCTGCTTGTGTTGACGGACCTGTTCGTGACAACAGCGATGCTGTCCG
TGCACTCTTGGACGCTGGGGCCGACGTCAACGCCAAGTCTGGGGACAACG
GTGACTGCACGCCTCCCCATGTTGCCGTCGATCGTCGGATGTCATCGATC
TGCACGATCCGCGCGTTGTTGGAGGGAGGGGCGGATGTCAATGTGCGTAA
CGGCTACGACCATACGCCGTTGCATGTAGCTTGCATGTGTTTTAATGTTT
CTGGTGTGGAGCTTCTGCTGCGTTGGGGAGCAGATGAGATGCTGAAGGAC
GACGATGGAAGCACGCCTGCAGACGTAATGGGAGAGATGGGAGATGGCGA
CCTCACCGACGAAGAAATCGAGACCGACCACCAGCGCATTCGCCACGTGC
TGGCGCGCGCTCCAGCCGACAGGTCATGGCGTCGCCGCGGCTGGCTGGTG
CTGAGCCGTTGCTGCCCGACCAGAGTGCACATTGCAAACAGAGGCAGCAG
CAGCGGCAGCAACGGCAACAGCAACAGTTGCTGCCTCAAGGTGGCGAGGG
TCAGCGGCAAGGAATCGCGTGAGGATGATGAGGAGACGGAAGACAAAATC
ATGTCCGACTGGAAGGATTTGGTGCGCAGGCTGGTCGGACTGGAGGTTGA
TGGCTTGTTCCGCTTGGTGGTGGACTTTCTGTGA
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