Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17669.1 vs. uniprot
Match:
A0A6H5LFZ8_9PHAE (Diaminopimelate epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LFZ8_9PHAE)
HSP 1 Score: 655 bits (1691), Expect = 4.350e-234
Identity = 325/333 (97.60%), Postives = 330/333 (99.10%), Query Frame = 1
Query: 52 MWPTTIALLSLGAHHASAFVVAPGTALGRQGPAAARSAATRCGASTVAMSATKLVPFSKYQGLGNDFILVDNREETEPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKTKAEYKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPSTLPANEDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLADRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGDAVVR 1050
MWPTTIALL++GAHHA+AFVVAPGTALGRQGPAAARSAATRCGASTVAMSATKLVPFSKYQGLGNDFILVDNREE EPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGK KAEYKIHTLAGTIIP+AREDGLVTVDMGPPELNGPKVPSTLP N+DGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLADRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGDAVVR
Sbjct: 1 MWPTTIALLAIGAHHAAAFVVAPGTALGRQGPAAARSAATRCGASTVAMSATKLVPFSKYQGLGNDFILVDNREEAEPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKKAEYKIHTLAGTIIPLAREDGLVTVDMGPPELNGPKVPSTLPTNDDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLADRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGDAVVR 333
BLAST of mRNA_E-siliculosus-1a_M_contig97.17669.1 vs. uniprot
Match:
A0A835YU85_9STRA (Diaminopimelate epimerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU85_9STRA)
HSP 1 Score: 405 bits (1040), Expect = 9.480e-136
Identity = 195/277 (70.40%), Postives = 224/277 (80.87%), Query Frame = 1
Query: 220 FSKYQGLGNDFILVDNREETEPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKTKAEYKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPSTLPANEDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLADRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGDAVVR 1050
F KY+GLGNDFILVDNRE +P+L+ E+SA LCDR +GIGGDGVIFALPG D+DY MRI NSDGSEPEMCGNGIRCMARFLADL+G+ +A Y+I T AG I+PV GLVTVDMGPPELNGPKVP+TLP DG V+ P++V G+ W VTCVSMGNPHA+VFV D++ + L IGP FE + FPA+ NTEFVQVL+R H+KM VWERG G T ACGTGACALVVA+VL GLADRKCTVTLPGGDL I+WRE+D KVYMTGPA F G V+
Sbjct: 28 FHKYEGLGNDFILVDNRETADPVLSPEQSAKLCDRNFGIGGDGVIFALPGEGDLDYKMRIYNSDGSEPEMCGNGIRCMARFLADLDGEKEATYRIGTGAGLIVPVVGGGGLVTVDMGPPELNGPKVPTTLPTGADGAVVAAPLEVAGQQWSVTCVSMGNPHAIVFVNDLNTIKLADIGPLFEHNAVFPARTNTEFVQVLSRSHLKMKVWERGAGATLACGTGACALVVAAVLNGLADRKCTVTLPGGDLVIDWREADNKVYMTGPATPVFSGSVRVQ 304
BLAST of mRNA_E-siliculosus-1a_M_contig97.17669.1 vs. uniprot
Match:
A0A7R9YC33_9STRA (Diaminopimelate epimerase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC33_9STRA)
HSP 1 Score: 383 bits (984), Expect = 4.010e-127
Identity = 188/288 (65.28%), Postives = 225/288 (78.12%), Query Frame = 1
Query: 202 ATKLVPFSKYQGLGNDFILVDNREETEPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKTKAE--YKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPSTL-PANEDGVVLKEPIKVD---GKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLADRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGDAVV 1047
A K V FSKYQGLGNDF+LVDNR+ EP+LT +ES +LCDR +G+G DGVIFA+PG D DYSMRI NSDGSEPEMCGNGIRCMA+FL DL+G + AE YKI TLAGT++P G++TVDMG PEL GP+VP+TL P +D V+ P+ GKDW+VTCVSMGNPH + FV D+DA+DL +GPQFE HP FPA++NTEFVQVL++ H+KM VWERG G T ACGTGACAL VA+VL L DRK TVTLPGGDL IEW E D ++ MTGPA+L F G+A++
Sbjct: 29 AAKKVAFSKYQGLGNDFLLVDNRDAEEPILTPDESEALCDRHFGVGADGVIFAMPGRDGCDYSMRIYNSDGSEPEMCGNGIRCMAKFLQDLDGSSGAEKQYKIWTLAGTMVPTVVASGMITVDMGEPELRGPEVPTTLKPTRDDSAVIDAPMAAPLPGGKDWKVTCVSMGNPHCITFVDDLDAVDLAAVGPQFENHPVFPARVNTEFVQVLSKSHLKMKVWERGAGPTLACGTGACALHVAAVLNNLCDRKATVTLPGGDLIIEWAE-DNRLLMTGPADLVFSGEAML 315
BLAST of mRNA_E-siliculosus-1a_M_contig97.17669.1 vs. uniprot
Match:
A0A7S2S1Q0_9STRA (Diaminopimelate epimerase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1Q0_9STRA)
HSP 1 Score: 382 bits (981), Expect = 1.850e-126
Identity = 186/278 (66.91%), Postives = 222/278 (79.86%), Query Frame = 1
Query: 214 VPFSKYQGLGNDFILVDNREETEPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGK--TKAEYKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPSTLPANEDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAG-LADRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGD 1038
V F KY GLGNDFILVDNR T+P+++ E++A +CDR +G+GGDGVIFALP S+ DY+MRI NSDGSEPEMCGNGIRCMARFL L+G T+ Y I+T AG IIPV R DGLVTVDMGPP L GPKVP+TL + VV+ P++V +DWEVTCVSMGNPHAVVF+ +VD+LDL +GPQFE+HP FPA+INTEFV+V + H+KM VWERG G T ACGTGACAL VA++LAG ++R C VTLPGGDL+IEWRE + + YMTGPAEL F GD
Sbjct: 50 VAFQKYHGLGNDFILVDNRHSTDPVMSPEQAARMCDRNFGVGGDGVIFALP-SESADYAMRIYNSDGSEPEMCGNGIRCMARFLQKLDGSEGTETTYTINTGAGPIIPVIRGDGLVTVDMGPPILEGPKVPTTLAPTQGDVVINAPLRVADQDWEVTCVSMGNPHAVVFIDNVDSLDLHHVGPQFESHPEFPARINTEFVEVKSPTHLKMKVWERGAGPTLACGTGACALTVAAILAGKTSERTCVVTLPGGDLEIEWREENNRCYMTGPAELVFSGD 326
BLAST of mRNA_E-siliculosus-1a_M_contig97.17669.1 vs. uniprot
Match:
A0A8J5XME3_DIALT (Diaminopimelate epimerase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XME3_DIALT)
HSP 1 Score: 369 bits (948), Expect = 8.230e-122
Identity = 184/275 (66.91%), Postives = 216/275 (78.55%), Query Frame = 1
Query: 220 FSKYQGLGNDFILVDNREETEPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGK-TKAEYKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPSTLPANEDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLP--TIGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLADRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQG 1035
FSKY G+GNDFILVDNR E +LT ++ +CDR +GIGGDGVIFALPG D DY+MRIINSDGSEPEMCGNGIRCMA+F+A LEG+ T Y I T AG IIP DGLV VDMG P L+G KVP+TLPA+ G V+ P+ V G+ W VTCVSMGNPHA+VFV +D LP TIGP FE H +FPA+ NTEFV+VL+R H++M VWERG G T ACGTGACAL+VA+VL GLA+R+ TV+LPGGDL+IEWRESDGK+ MTGPAELA+ G
Sbjct: 28 FSKYHGIGNDFILVDNRASRELLLTPAQAERMCDRNFGIGGDGVIFALPGEDGADYAMRIINSDGSEPEMCGNGIRCMAKFVAALEGRATSHTYTISTRAGPIIPALTADGLVAVDMGRPILDGAKVPTTLPADASGRVIGAPLDVAGRRWAVTCVSMGNPHAIVFVDSLDESSLPLSTIGPLFEKHAAFPARTNTEFVKVLSRTHLQMRVWERGAGATLACGTGACALLVAAVLNGLAERRATVSLPGGDLEIEWRESDGKITMTGPAELAYTG 302
BLAST of mRNA_E-siliculosus-1a_M_contig97.17669.1 vs. uniprot
Match:
A0A7S2HNF9_9STRA (Diaminopimelate epimerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HNF9_9STRA)
HSP 1 Score: 368 bits (945), Expect = 4.640e-121
Identity = 183/280 (65.36%), Postives = 218/280 (77.86%), Query Frame = 1
Query: 214 VPFSKYQGLGNDFILVDNREETEPMLTAEESASLCDRRYGIGGDGVIFALPGSD-DMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEG---KTKAEYKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPSTL-PANEDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAG-LADRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQG 1035
V F KYQGLGNDFIL+DNR++ EP+LT ++ +CDR +G+GGDGVIFALP S+ + DY MRI NSDGSEPEMCGNGIRCM +F+ +EG K Y I T AG IIP REDGLVTVDMG P L G KVP+TL P DG+VL P++V G++W VTCVSMGNPHA+VFV D++A+DL ++GP FET+P FPAKINTEFVQVL+ H+KM VWERG G+T ACGTGACAL VA++ +G +R CTV LPGGDL IEWRESDGK+YMTG AE F G
Sbjct: 43 VEFEKYQGLGNDFILIDNRDDPEPLLTPAQAERMCDRNFGVGGDGVIFALPASEAESDYRMRIYNSDGSEPEMCGNGIRCMTKFIQKIEGGAETAKESYHISTGAGPIIPKIREDGLVTVDMGFPILEGSKVPTTLQPTKSDGMVLDAPLEVMGQEWLVTCVSMGNPHAIVFVDDLEAVDLNSVGPVFETNPVFPAKINTEFVQVLDPTHLKMKVWERGAGVTLACGTGACALTVAAIASGRTTERTCTVHLPGGDLDIEWRESDGKIYMTGAAEPVFDG 322
BLAST of mRNA_E-siliculosus-1a_M_contig97.17669.1 vs. uniprot
Match:
A0A2V0NX36_9CHLO (Diaminopimelate epimerase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NX36_9CHLO)
HSP 1 Score: 367 bits (942), Expect = 9.330e-121
Identity = 189/316 (59.81%), Postives = 226/316 (71.52%), Query Frame = 1
Query: 118 PGTALGRQGPAAARSAATRCGASTVAMSATKLVPFSKYQGLGNDFILVDNREETEPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKTKAEYKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPSTLP-ANEDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPD-----VDALDLPTIGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLADRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGDAVV 1047
P A GR+G AA A T + F KYQGLGNDFILVDNR EP+LT +++A+LCDR +GIGGDGVIFALP D +MRI NSDGSEPEMCGNGIRC+ARF+AD++G +Y+IHTLAG I P DG V VDMG P L+GP+VP+TLP E G V++ P+ + G+ W +TCVSMGNPHAV++ + VD LD+ IGPQFE++ FPA+ NTEFV+VLNRGHV+MVVWERG G T ACGTGACA VVA VL G DR+C V LPGG L IEWRE+D ++YMTGPAELAF G V
Sbjct: 9 PAAAAGRRGARLQVRAAAAAAAKTT-------LNFKKYQGLGNDFILVDNRHAPEPILTPDQAAALCDRNFGIGGDGVIFALPPVGATDLTMRIYNSDGSEPEMCGNGIRCLARFVADVDGAAARKYRIHTLAGLIQPELLGDGQVCVDMGEPILDGPRVPTTLPPTREGGAVVEAPLPLAGRRWGITCVSMGNPHAVIYSANGAPIKVDDLDIFDIGPQFESNTVFPARTNTEFVEVLNRGHVRMVVWERGAGRTLACGTGACATVVAGVLEGKVDRRCRVDLPGGPLHIEWREADNRIYMTGPAELAFSGQVAV 317
BLAST of mRNA_E-siliculosus-1a_M_contig97.17669.1 vs. uniprot
Match:
K9XW03_STAC7 (Diaminopimelate epimerase n=2 Tax=Stanieria TaxID=102115 RepID=K9XW03_STAC7)
HSP 1 Score: 361 bits (927), Expect = 5.080e-119
Identity = 174/277 (62.82%), Postives = 214/277 (77.26%), Query Frame = 1
Query: 214 VPFSKYQGLGNDFILVDNREETEPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEG--KTKAEYKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPSTLPANEDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLADRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGD 1038
+ FSKYQGLGNDFIL+DNR +EPM+T E++ +CDR +GIG DGVIFALPG+D+ DY+MRI NSDGSEPEMCGNGIRC+A+F+ADLE + Y+IHTLAG I P + +GLVTVDMG P+L K+P+TL A ED V+ + ++V G+ W VTCVSMGNPH + FV D D + L IG QFE HP+FP + NTEF+QV+ ++KM VWERG GIT ACGTGACA VVA VL G ++RKCTV LPGG LQIEW E+DG+VYMTGPA+ F G+
Sbjct: 3 IKFSKYQGLGNDFILIDNRHSSEPMVTPEQAMQMCDRHFGIGADGVIFALPGTDNTDYTMRIYNSDGSEPEMCGNGIRCLAQFIADLEQTEQINKSYRIHTLAGVITPQLQSNGLVTVDMGKPQLEAAKIPTTLCAPEDKVINQN-LEVAGQSWLVTCVSMGNPHCITFVTDSDRISLEQIGSQFEHHPAFPQRTNTEFIQVVRSDYLKMRVWERGAGITLACGTGACASVVAGVLTGQSERKCTVELPGGCLQIEWSETDGRVYMTGPAKQVFVGN 278
BLAST of mRNA_E-siliculosus-1a_M_contig97.17669.1 vs. uniprot
Match:
UPI001A0C8BC8 (Diaminopimelate epimerase n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI001A0C8BC8)
HSP 1 Score: 360 bits (923), Expect = 1.970e-118
Identity = 173/277 (62.45%), Postives = 205/277 (74.01%), Query Frame = 1
Query: 211 LVPFSKYQGLGNDFILVDNREETEPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEG--KTKAEYKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPSTLPANEDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLADRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQG 1035
++ FSKY GLGNDFIL+DNR EP L E + +CDR +GIG DGVIFALPG D DY+M+I NSDGSEPEMCGNGIRC+A+F+ADLEG + YKIHTLAG I P DG VTVDMG P+L ++P+ L + + V+ +P++V GK W VTCVSMGNPH ++FV DVDA+ L IGPQFE HP+FP + NTEF+QV+ ++KM VWERG GIT ACGTGACA VVA VL DR CTV LPGG LQIEW E DG+VYMTGPAE F G
Sbjct: 2 VIEFSKYHGLGNDFILIDNRHSPEPALAPETAVKMCDRHFGIGADGVIFALPGRDGTDYTMKIYNSDGSEPEMCGNGIRCLAKFIADLEGTERVNKSYKIHTLAGVITPKLESDGQVTVDMGAPQLTASEIPTNL-GSPEAKVIAQPLQVTGKSWSVTCVSMGNPHCIIFVEDVDAILLTKIGPQFEHHPAFPQRTNTEFIQVIKPNYLKMRVWERGAGITLACGTGACASVVAGVLNDKCDRLCTVELPGGCLQIEWSELDGRVYMTGPAEKVFTG 277
BLAST of mRNA_E-siliculosus-1a_M_contig97.17669.1 vs. uniprot
Match:
A0A6T5Q8N6_HETAK (Diaminopimelate epimerase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q8N6_HETAK)
HSP 1 Score: 359 bits (921), Expect = 2.200e-117
Identity = 173/286 (60.49%), Postives = 214/286 (74.83%), Query Frame = 1
Query: 199 SATKLVPFSKYQGLGNDFILVDNREETEPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKTK--AEYKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPSTLPANEDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLADRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGDAVVR 1050
S+ + FSKY+GLGNDFILVDNRE EP +T +++ LC+R +GIGGDGVIF LPG D++MRI NSDGSEPEMCGNGIR +++A LEGK Y HTLAG II DGLV VDMG P +P+TL NEDG VL +P++VDGK +EV+CVSMGNPHA+VFV D+D LDL +GP FE HP+FPA++NTEFVQVL+R H+KM VWERG G T ACGTG CAL VA+VL G A+R VTLPGGDL I+W+E DG+++MTGP + F G+A+++
Sbjct: 47 SSADTISFSKYEGLGNDFILVDNRESMEPKITPDQAIKLCNRNFGIGGDGVIFVLPGQKGTDFTMRIFNSDGSEPEMCGNGIRVFTKYIAKLEGKENEPVRYTFHTLAGEIIGDVTADGLVRVDMGFPIFKAADIPTTLAENEDGYVLNQPLEVDGKTYEVSCVSMGNPHAIVFVDDLDQLDLYKVGPIFEKHPAFPARVNTEFVQVLSRDHLKMKVWERGAGPTLACGTGTCALAVAAVLTGKAERSVRVTLPGGDLLIDWQE-DGRIFMTGPGDFVFSGEALLK 331
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17669.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 25
0 1 Expect = 4.35e-234 / Id = 97.60 Expect = 9.48e-136 / Id = 70.40 Expect = 4.01e-127 / Id = 65.28 Expect = 1.85e-126 / Id = 66.91 Expect = 8.23e-122 / Id = 66.91 Expect = 4.64e-121 / Id = 65.36 Expect = 9.33e-121 / Id = 59.81 Expect = 5.08e-119 / Id = 62.82 Expect = 1.97e-118 / Id = 62.45 Expect = 2.20e-117 / Id = 60.49 Sequence A0A6H5LFZ8_9PHAE A0A835YU85_9STRA A0A7R9YC33_9STRA A0A7S2S1Q0_9STRA A0A8J5XME3_DIALT A0A7S2HNF9_9STRA A0A2V0NX36_9CHLO K9XW03_STAC7 UPI001A0C8BC8 A0A6T5Q8N6_HETAK Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 1002 Model size 1642 Exons 6 Ec32 ortholog Ec-06_009100.1 Ec32 ortholog description diaminopimelate epimerase Hectar predicted targeting category chloroplast BRITE ko00000,ko00001,ko00002,ko01000 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. E EC 5.1.1.7 EggNOG OGs 2QQKJ@2759,COG0253@1 EggNOG free text desc. diaminopimelate epimerase activity GOs GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 KEGG Module M00016,M00525,M00527 KEGG Pathway ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 KEGG Reaction R02735 KEGG ko ko:K01778 KEGG rclass RC00302 Seed eggNOG ortholog 2880.D7G034 Seed ortholog evalue 1.3e-161 Seed ortholog score 575.9 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936552.8368049-UTR-E-siliculosus-1a_M_contig97:503861..503912 1622936552.8368049-UTR-E-siliculosus-1a_M_contig97:503861..503912 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig97 503862..503912 + 1696251127.7725816-UTR-E-siliculosus-1a_M_contig97:503861..503912 1696251127.7725816-UTR-E-siliculosus-1a_M_contig97:503861..503912 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig97 503862..503912 + 1622936553.0356414-UTR-E-siliculosus-1a_M_contig97:508145..508734 1622936553.0356414-UTR-E-siliculosus-1a_M_contig97:508145..508734 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig97 508146..508734 + 1696251127.865529-UTR-E-siliculosus-1a_M_contig97:508145..508734 1696251127.865529-UTR-E-siliculosus-1a_M_contig97:508145..508734 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig97 508146..508734 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936552.8551626-CDS-E-siliculosus-1a_M_contig97:503912..504184 1622936552.8551626-CDS-E-siliculosus-1a_M_contig97:503912..504184 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 503913..504184 + 1696251127.7894087-CDS-E-siliculosus-1a_M_contig97:503912..504184 1696251127.7894087-CDS-E-siliculosus-1a_M_contig97:503912..504184 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 503913..504184 + 1622936552.8698308-CDS-E-siliculosus-1a_M_contig97:504727..504824 1622936552.8698308-CDS-E-siliculosus-1a_M_contig97:504727..504824 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 504728..504824 + 1696251127.804977-CDS-E-siliculosus-1a_M_contig97:504727..504824 1696251127.804977-CDS-E-siliculosus-1a_M_contig97:504727..504824 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 504728..504824 + 1622936552.8830392-CDS-E-siliculosus-1a_M_contig97:505531..505645 1622936552.8830392-CDS-E-siliculosus-1a_M_contig97:505531..505645 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 505532..505645 + 1696251127.8143952-CDS-E-siliculosus-1a_M_contig97:505531..505645 1696251127.8143952-CDS-E-siliculosus-1a_M_contig97:505531..505645 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 505532..505645 + 1622936552.921704-CDS-E-siliculosus-1a_M_contig97:506162..506279 1622936552.921704-CDS-E-siliculosus-1a_M_contig97:506162..506279 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 506163..506279 + 1696251127.8237197-CDS-E-siliculosus-1a_M_contig97:506162..506279 1696251127.8237197-CDS-E-siliculosus-1a_M_contig97:506162..506279 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 506163..506279 + 1622936552.9477155-CDS-E-siliculosus-1a_M_contig97:506912..507071 1622936552.9477155-CDS-E-siliculosus-1a_M_contig97:506912..507071 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 506913..507071 + 1696251127.8342676-CDS-E-siliculosus-1a_M_contig97:506912..507071 1696251127.8342676-CDS-E-siliculosus-1a_M_contig97:506912..507071 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 506913..507071 + 1622936552.9689317-CDS-E-siliculosus-1a_M_contig97:507902..508145 1622936552.9689317-CDS-E-siliculosus-1a_M_contig97:507902..508145 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 507903..508145 + 1696251127.8445082-CDS-E-siliculosus-1a_M_contig97:507902..508145 1696251127.8445082-CDS-E-siliculosus-1a_M_contig97:507902..508145 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 507903..508145 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig97.17669.1
>prot_E-siliculosus-1a_M_contig97.17669.1 ID=prot_E-siliculosus-1a_M_contig97.17669.1|Name=mRNA_E-siliculosus-1a_M_contig97.17669.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=334bp
MWPTTIALLSLGAHHASAFVVAPGTALGRQGPAAARSAATRCGASTVAMS back to top mRNA from alignment at E-siliculosus-1a_M_contig97:503862..508734+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig97.17669.1 ID=mRNA_E-siliculosus-1a_M_contig97.17669.1|Name=mRNA_E-siliculosus-1a_M_contig97.17669.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4873bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:503862..508734+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)TGTTGCTCGCTGTCACCACACCACCGAAAGCGTTCCCTAGACGTAGGCAC
C ATGTGGCCGACGACGATAGCGTTACTTTCACTCGGCGCCCACCATGCGT
CGGCTTTTGTGGTGGCCCCCGGCACTGCCCTTGGACGCCAGGGGCCGGCG
GCGGCAAGATCAGCAGCTACAAGATGCGGCGCATCTACGGTCGCAATGAG
CGCCACCAAGCTCGTGCCCTTCTCCAAGTACCAGGGACTGGGCAACGACT
TCATCCTCGTGGACAACAGAGAGGAAACGGAGCCGATGCTCACGGCTGAA
GAGTCCGCTAGCTTGTGCGATAG GTGGGAAGAATGCTGCGAAAGCTGTGC
GGGTGTGTTTCGAGAGTGCGTAACAACGTGCATGTGTGGACCAAGGGAAC
ATGAACATCGAAAAGGCCGTGTGCGAGAAACCAACCTCGGCGGTGTGTAC
CTTCACGTTTTAGTCAGATGTAGAACACCATTTCTCCTACAGCTTAATTT
CGCAGTGCGTCAACCGTAATAGCCGTCAGAACCCCAAGTTGCGTATGTTG
ACAAAGACGCTGTGACGTTGTTCCCGTAGAAACCAAGACATCTTGCCCAC
AGCATCACAGCATATGGCCACATCAACCCGCGTTGAGCACCGCCAACTTC
CGCAAGCTGGTCCGCTCAGGTCTACGTCAGGCCCGCTGTTGCCAGTAGCC
GTGTCGCCCTCACCCAGCTAGACAGCAGCAGCACCGCCGCCACTCTTCGA
GACCCCATTCTCAAGCGAGTATAGTACAGCAGTTTATCAGCCCAACCGAT
CGCCAGCCCAGCCCAACCGATCGCCGATCGATGTATCTCCCTTACCACCC
ACGCCGGACCGGACAGACGTTACGGCATCGGCGGAGACGGCGTTATCTTT
GCCCTTCCGGGGTCCGACGACATGGACTACTCGATGCGGATCATCAACTC
AGACGGGTCCGAG GTACGGCAGTAGTGGTTGTGGTCCCGGTTTAGCGGTC
CGTATGATATTAGTGTCAGAAGTGAATTCAGGGCAGGTCGCTGCAAGTTC
CGGCGGCGGCTATGTAATAGTCGGGGTGCAGGAGATCCACGCGGTGTAGT
GGAAGCTTCTACAGGGGTATGCTAAACCGCACCGACCACTGTATTATTGT
GTGGAAGGGAACCAGCTTATAACTGTGTCCACGGGCGGTCCGTCGCGAAA
TGAAGAAGTCAACAGCAGTAAACAGGCCCGGAGGCGAGCGTGGCGAAAGC
AACACATGCAGTTGGATGCGTTTCTGACAAAAAGTACCCGAGAACAGATC
CGTCTTTTGAAAGGGGATGCGCGCACGTATACCCTCTTGTACCGCAGATG
GCAATGTGTTGTAGACCGTGGATTTTGGAGCTGGTACGGGTCATGTGCAC
GAAGGGTTCGCCCAGGACAAACCGGGGGGGCTGCTCCGTGTCGGAGCGCG
TGAACCGTACGGGTTGACCCTGTTCTGACTTGGGATGCGATTTCCCGATC
CTTCACCAATACGCTACTGCTGCTGCCGTAGCTGCTGCTGCCGTAGCTGC
TGCCGCCGGAGCGAAAGCAGTAAATGGAAATACGCAAGAGGAGCATTGCA
ACAGATTACGACAACCTAACCCCCCGATGTCTTGACGCCTTTCTCTCGTT
GCCTGTACGCAATCGCGCAGCCGGAGATGTGCGGGAACGGGATCCGCTGC
ATGGCCAGGTTTCTGGCCGACCTGGAGGGGAAGACGAAGGCCGAGTACAA
GATCCACACGCTGGCGGGCACGATCATCCCCGTG GTGAGAGGTCGCAAAG
GGGGCAGGCGCGGTTGTCGCTCACCGTCGGTCCGTCAGCGTATGCGAAAA
CGCTTGAAGCCGTGGCCAACGCCGCAGGAGCGGCGCGTGTTTGGGAGCTG
TTTCTGCATGCCTGGCAGTGAGCTGCAGCACATAGGTGTACGCAGGCCGT
TTGTGTGCGTGGTCTCTAGAACTTCCACGAGAGCAAGGCTCTGCTTCCTG
TTGCTCTCGTGCGAGAGCGGATGGATGCGGCGTGTGTGCTGGTGTATCAT
TCCTGAAATATTTCTTGCCCCCCGAAGAAGGTTGCCTCGACAGAGCCCAC
GCGATTTCTCATGGCTCACTTCTCTTCCCCTTGGACCGACCCTACTTCTC
GCCTCAGTTGCTTTGGTTGCGTTTTGTGGAGCGACAAGCAGGACATGTTT
TCCTTACTTTCCATTTGCCCACCCACCCTTCCATGCAACAACTGACCTCC
CCCGCTCCTCTCGGGCTTGCCTCCGTCGGCCACAAAACTATTCGGGCGAA
GGCGCGAGAGGACGGGCTAGTCACGGTGGACATGGGACCCCCGGAGCTTA
ACGGGCCCAAGGTGCCCAGCACTCTGCCCGCTAATGAGGATGGGGTTGTG
CTGAAGGAGCCGATCAAG GTGGGCGGTTTGCTCTCGGTTCAATGGGGCCG
AGACATTGACGCAACCAAACAAGAAGCACAGCCCTTTACAACCGCACGAA
TGTTCCTCGATACAAGACGGTAGCAGCAGTTGCGTTTTCAATACAGCCAG
GCGAGGCGTTTTTGGTTACTGTTCTCGGGGCTACCGGCGGTATGTATCAA
TTCCTTTTGAGCTCTTCGCCTCGGTATCAACTCTCGGCGTTTCAATCTAA
AGCTCTTCCAATTTGCTGCACTGTCCACACACCACACAGCCCGCATCTCT
GTTTTTTGGCACCGAAATCGTGACGTTGTTTTCGGCCTTACGGAGGAAGT
CGCTGAACACCCGGAACAAGGTTAAGATTTTTCCCCGGAAGACAATAGCT
GGTATAGTATAGTATAGTATAGTCTCTGGCCGATGCTGTTGGGTATCACT
GGCTCTCCGCAGCCTCCCCCATCCCTCTCACCTTTGGCAACGTAGGAAGA
ACCATTGGCCATCCGTGATCGGTCCTGGGGGAACAATGCTCCGTCATCTC
GAGGACCCGTTGCCAATGGTCTTTTCATTTAATGCATGCAAAACATGAGC
AGCGCCCCCCCCGCCACCGTTCCTGGTTGCCGGCACTGAAACCCCTGAAA
GGTGGACGGCAAGGATTGGGAGGTCACATGCGTGAGCATGGGCAACCCGC
ACGCCGTTGTCTTCGTTCCGGACGTGGACGCGCTGGACCTGCCGACCATT
GGGCCCCAGTTCGAGACCCACCCTTCTTTCCCGGCCAAGATCAATACCGA
GTTCGTTCAG GTGGGGGGCTGCAGCGGTGCGCGAGTACACTCGGCTTGTG
TTGTAGTGGACCAGTACAGTTGTGTATTACGGATACTTGCCACTGCTGTG
ATGCATGAGAACTTTTCCATTGAGGTGACGTTATTTCGGTAGGATCCGAC
GGCTGCAACATTTGGTGTTCGAACTCGGTGCGGCCGGTTGCTGCGGCTGC
TGTCCATGGAGGAACGGTTTTCGGGCAGGTTTATTTATACGAAGCAGTTC
AGTGCATGTCTGCACATGCACCCTCATCTGCACCTTGTTGAGTCCTCGGC
CACAGCTTCGTACCAAAGTAGCCTTCAATGATGCTGCAGTTCGAGTTACA
TGTTTTTGCAGAATGTCCTGCCACTGCATATAGGTACCACCAAGCTTGCA
CCTGTGTTTCTAAACACTGCTTGTGAGGTGTCGAGACCTTGTCAGCTTTG
AACCTGTCTGGCGCGCGCGATTAAGTTGCTATCCGTTTGCGGTGAACGTT
TCGTGTTCTCGAATTCCATGGTAGTTGCGGACATTGGTACAACTTGCCGG
CCCCCCGTTTCAACCCCTCGTACGGCACTCAGGTAGTTCGCCCCCCCGCC
CCCCCCTCCAACGGCAGAGTAGGAAGGAACGATTGGCTACCGGTGATCGT
TCTTGTTGGAACAATGATCCGTCCTCTCAAGGACGCGTGGCCAATTGTCC
AACAAATGAGGCATGCAAAACATGAGTACCCCCGCCACCACCACCACCAC
CCCCATCTCCTCCTGTAAAACCGAGCAGTTATACGAGAGTCACACTCTCT
TTTCCGCGGTATATCGGTATATCCCTCCTCCTATCACACAGGTCTTGAAC
AGGGGGCACGTGAAGATGGTGGTCTGGGAGCGGGGGTGCGGCATCACCCA
GGCCTGCGGAACCGGCGCTTGCGCCCTCGTCGTCGCCTCCGTCCTCGCGG
GCCTGGCGGACCGCAAGTGCACGGTGACCCTGCCGGGGGGAGACCTGCAG
ATCGAGTGGCGGGAGTCGGACGGGAAGGTTTACATGACGGGGCCGGCGGA
GCTGGCGTTTCAGGGAGACGCCGTCGTGCGGTGA CATATTTTTTTCATCT
TCTTCTTCTAGGTCGAAGATAAATTTGGCGGTTGCGGGAGGGCTAGGTTG
TGAAGGTTTTGATTAATGCTGCGAAGCGCGGTGGTTGGGAAGAACTCGGG
AACGTTTGTTGGAAGTTGGGGGAAGGGGATCTGGTGTGTGTGTGTATCGA
TCCGACGCATGTTGAAAATTTCTCCAGAAAGCTTTAACGTGTTAGCTGGG
TTGATGGAAATCAGTGTGCGGTGACGCTTGTGGATGAATTCGAAGGCGTG
TTTTTTTTTTTGGCTGCCCTTCGAAACAGCCTTCCAGAATGGACGTTCGT
CGTCTTGGCGGCGGGGGATGGAGATCTGCGCCAAACTTCGCAAAAGCAAA
TTTTGCCATTTTTTTTTTTTTGTCCTGACATGGCGCACGCAAAACATGCG
CAGGGGGGAGGTAAAATACTACAGCAGCAGTGCGCATTGTCACCGTTCAT
GGACTCTTCGCCGGCCGTTGAAAGTGCTCTCTCTCGCACTCGCCCGTCGG
GCTTTCGCGCACATTCAACTGTGCAAATTTCAACTGATCTGTTCCGTTGT
TGTGATTGAAAGCGAACTCCTGG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:503862..508734+
>mRNA_E-siliculosus-1a_M_contig97.17669.1 ID=mRNA_E-siliculosus-1a_M_contig97.17669.1|Name=mRNA_E-siliculosus-1a_M_contig97.17669.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2004bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:503862..508734+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male) back to top