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Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: D7G033_ECTSI (Ribosomal protein L35 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G033_ECTSI) HSP 1 Score: 236 bits (601), Expect = 1.740e-70 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 3
Query: 723 STMRTSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
STMRTSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI
Sbjct: 42 STMRTSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 156
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A836CIX4_9STRA (Ribosomal protein L35Ae-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX4_9STRA) HSP 1 Score: 190 bits (482), Expect = 9.380e-54 Identity = 91/111 (81.98%), Postives = 102/111 (91.89%), Query Frame = 3
Query: 735 TSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
+SPR QPVRLYVKGV+LG+KRGLRN Y+HTSLIKIQGVED A+ FYLGKRIAYIYKAK LKN +K+RV+WG+VCR HGTNGV+RAKFRTNLPPKAIGAPVRVMLYPS+I
Sbjct: 12 SSPR--QPVRLYVKGVVLGYKRGLRNQYNHTSLIKIQGVEDTAATEFYLGKRIAYIYKAKALKNNSKFRVIWGRVCRAHGTNGVIRAKFRTNLPPKAIGAPVRVMLYPSRI 120
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A7S2SN13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN13_9STRA) HSP 1 Score: 177 bits (449), Expect = 4.640e-49 Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 3
Query: 747 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
S QPVRLYVKGV+LG+KRGLRN Y HTSLIKIQGV+D + +FYLGKR+AYIYKA NG+KYRV+WGKVCR HGT GVVR KFRTNLPPKAIG PVRVMLYPS+I
Sbjct: 13 SSQPVRLYVKGVVLGYKRGLRNQYCHTSLIKIQGVDDCKDVDFYLGKRVAYIYKASNKVNGSKYRVIWGKVCRAHGTTGVVRCKFRTNLPPKAIGGPVRVMLYPSRI 119
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A4D9CXD4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXD4_9STRA) HSP 1 Score: 175 bits (443), Expect = 2.640e-48 Identity = 83/107 (77.57%), Postives = 94/107 (87.85%), Query Frame = 3
Query: 747 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
S +PVRLYVKGV+LG+KRGLR +HTSLIKI G+++K++ +FYLGKRIAYIYKAKTLKN TKYR +WGKV R HGTNGVVRAKFR NLPPKAIG PVRVMLYPS I
Sbjct: 6 SSEPVRLYVKGVVLGYKRGLRQQTNHTSLIKIDGLDEKKSVDFYLGKRIAYIYKAKTLKNNTKYRAIWGKVTRAHGTNGVVRAKFRRNLPPKAIGGPVRVMLYPSTI 112
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A7S1XMC8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMC8_9STRA) HSP 1 Score: 171 bits (434), Expect = 6.610e-47 Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 3
Query: 753 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTL-KNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
QPVRLY KGV+LG+KRGLRN +HTSLIKIQGVEDK+ + FYLGKRIAYIYKA T K G+K+RV+WGKVCR HG+NGVVRAKFR NLPP IGAPVRVMLYPS+I
Sbjct: 16 QPVRLYTKGVVLGYKRGLRNQINHTSLIKIQGVEDKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRAKFRKNLPPSCIGAPVRVMLYPSQI 121
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A7S1TVH1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVH1_9STRA) HSP 1 Score: 171 bits (434), Expect = 2.840e-46 Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 3
Query: 753 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTL-KNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
QPVRLY KGV+LG+KRGLRN +HTSLIKIQGVEDK+ + FYLGKRIAYIYKA T K G+K+RV+WGKVCR HG+NGVVRAKFR NLPP IGAPVRVMLYPS+I
Sbjct: 62 QPVRLYTKGVVLGYKRGLRNQINHTSLIKIQGVEDKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRAKFRKNLPPSCIGAPVRVMLYPSQI 167
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A7R9U9P7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9P7_9STRA) HSP 1 Score: 169 bits (428), Expect = 3.610e-46 Identity = 80/106 (75.47%), Postives = 94/106 (88.68%), Query Frame = 3
Query: 753 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTL-KNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
QPVRLYVKGV+LG+KRG RN Y+HTSL+KIQGV++K+ + FYLGKRIAYIYKA T K G+K+RV+WGKVCR HG+NGVVR KFR NLPP +IGAPVRVMLYPS+I
Sbjct: 8 QPVRLYVKGVVLGYKRGQRNQYNHTSLVKIQGVDEKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRCKFRKNLPPTSIGAPVRVMLYPSQI 113
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A7S2XUS1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS1_9STRA) HSP 1 Score: 168 bits (426), Expect = 8.110e-46 Identity = 79/105 (75.24%), Postives = 92/105 (87.62%), Query Frame = 3
Query: 753 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
QPVRLYVK VM+G+K GLR + HT+L KIQGV+DK+++ FYLGK+IAYIYKA TLK +KYRVVWGKV R HG+NGVVRAKFRTNLPPKAIG P+RVMLYPSK+
Sbjct: 14 QPVRLYVKAVMVGYKGGLRTQHCHTALAKIQGVDDKKSAGFYLGKKIAYIYKAHTLKKNSKYRVVWGKVTRAHGSNGVVRAKFRTNLPPKAIGGPLRVMLYPSKV 118
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A329S8J7_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A329S8J7_9STRA) HSP 1 Score: 166 bits (420), Expect = 8.310e-45 Identity = 78/107 (72.90%), Postives = 92/107 (85.98%), Query Frame = 3
Query: 747 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
SGQP RLYVKGV LG+KRGLRN Y HT+L+KIQG+ DK+ +FYLGK+IAYIYKAK+LKNGT++RVVWGKV R HG+NGVVRAKF NLP +AI VRVMLYPS++
Sbjct: 24 SGQPTRLYVKGVFLGYKRGLRNQYSHTALVKIQGLTDKKDVDFYLGKKIAYIYKAKSLKNGTQFRVVWGKVMRAHGSNGVVRAKFAKNLPAEAISKSVRVMLYPSRV 130
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: K3W6U5_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3W6U5_GLOUD) HSP 1 Score: 165 bits (418), Expect = 8.720e-45 Identity = 77/107 (71.96%), Postives = 91/107 (85.05%), Query Frame = 3
Query: 747 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
SGQP RLYVKGV +G+KRGLRN Y HTSLIKIQG++DK+ +FYLGK+IAYIYK KTLKN +K+RV+WGKV R HG NG+VRAKF NLP +AI A VRVMLYPS++
Sbjct: 5 SGQPTRLYVKGVFVGYKRGLRNQYSHTSLIKIQGLQDKKDVDFYLGKKIAYIYKGKTLKNNSKFRVIWGKVTRAHGNNGLVRAKFAKNLPAEAISASVRVMLYPSRV 111
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Start | 1 |
| Stop | 1 |
| Cds size | 342 |
| Model size | 2121 |
| Exons | 5 |
| Ec32 ortholog | Ec-06_009110.1 |
| Ec32 ortholog description | 60S ribosomal protein L35a |
| Hectar predicted targeting category | other localisation |
| BRITE | br01610,ko00000,ko00001,ko00002,ko01000,ko01002,ko03011,ko03029 |
| Best eggNOG OG | NA|NA|NA |
| Best tax level | Eukaryota |
| COG Functional cat. | J |
| EC | 3.4.24.64 |
| EggNOG OGs | COG2451@1,KOG0887@2759 |
| EggNOG free text desc. | structural constituent of ribosome |
| GOs | GO:0000184,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015934,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042254,GO:0042273,GO:0042886,GO:0043021,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046872,GO:0046907,GO:0046914,GO:0048519,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060255,GO:0065007,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904 |
| KEGG Module | M00177,M00179 |
| KEGG Pathway | ko03010,map03010 |
| KEGG ko | ko:K01412,ko:K02917 |
| Preferred name | RPL35A |
| Seed eggNOG ortholog | 2880.D7G033 |
| Seed ortholog evalue | 3.1e-59 |
| Seed ortholog score | 234.2 |
| Taxonomic scope | Eukaryota |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622936552.6937032-UTR-E-siliculosus-1a_M_contig97:497824..498875 | 1622936552.6937032-UTR-E-siliculosus-1a_M_contig97:497824..498875 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig97 497825..498875 - |
| 1696251127.6917675-UTR-E-siliculosus-1a_M_contig97:497824..498875 | 1696251127.6917675-UTR-E-siliculosus-1a_M_contig97:497824..498875 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig97 497825..498875 - |
| 1622936552.788298-UTR-E-siliculosus-1a_M_contig97:502903..503631 | 1622936552.788298-UTR-E-siliculosus-1a_M_contig97:502903..503631 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig97 502904..503631 - |
| 1696251127.7601807-UTR-E-siliculosus-1a_M_contig97:502903..503631 | 1696251127.7601807-UTR-E-siliculosus-1a_M_contig97:502903..503631 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig97 502904..503631 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622936552.7144485-CDS-E-siliculosus-1a_M_contig97:498875..498929 | 1622936552.7144485-CDS-E-siliculosus-1a_M_contig97:498875..498929 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig97 498876..498929 - |
| 1696251127.7065485-CDS-E-siliculosus-1a_M_contig97:498875..498929 | 1696251127.7065485-CDS-E-siliculosus-1a_M_contig97:498875..498929 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig97 498876..498929 - |
| 1622936552.728285-CDS-E-siliculosus-1a_M_contig97:499455..499563 | 1622936552.728285-CDS-E-siliculosus-1a_M_contig97:499455..499563 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig97 499456..499563 - |
| 1696251127.7169762-CDS-E-siliculosus-1a_M_contig97:499455..499563 | 1696251127.7169762-CDS-E-siliculosus-1a_M_contig97:499455..499563 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig97 499456..499563 - |
| 1622936552.741994-CDS-E-siliculosus-1a_M_contig97:500214..500277 | 1622936552.741994-CDS-E-siliculosus-1a_M_contig97:500214..500277 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig97 500215..500277 - |
| 1696251127.7278473-CDS-E-siliculosus-1a_M_contig97:500214..500277 | 1696251127.7278473-CDS-E-siliculosus-1a_M_contig97:500214..500277 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig97 500215..500277 - |
| 1622936552.757552-CDS-E-siliculosus-1a_M_contig97:500669..500759 | 1622936552.757552-CDS-E-siliculosus-1a_M_contig97:500669..500759 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig97 500670..500759 - |
| 1696251127.7387629-CDS-E-siliculosus-1a_M_contig97:500669..500759 | 1696251127.7387629-CDS-E-siliculosus-1a_M_contig97:500669..500759 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig97 500670..500759 - |
| 1622936552.7722466-CDS-E-siliculosus-1a_M_contig97:502876..502903 | 1622936552.7722466-CDS-E-siliculosus-1a_M_contig97:502876..502903 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig97 502877..502903 - |
| 1696251127.7487464-CDS-E-siliculosus-1a_M_contig97:502876..502903 | 1696251127.7487464-CDS-E-siliculosus-1a_M_contig97:502876..502903 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig97 502877..502903 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig97.17668.1 >prot_E-siliculosus-1a_M_contig97.17668.1 ID=prot_E-siliculosus-1a_M_contig97.17668.1|Name=mRNA_E-siliculosus-1a_M_contig97.17668.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=114bp
MRTSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFY LGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAI GAPVRVMLYPSKI* back to topmRNA from alignment at E-siliculosus-1a_M_contig97:497825..503631- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig97.17668.1 ID=mRNA_E-siliculosus-1a_M_contig97.17668.1|Name=mRNA_E-siliculosus-1a_M_contig97.17668.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5807bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:497825..503631- (Ectocarpus siliculosus Ec864m_EcPH12_78m male) TGATTTCCGTTGCTTTTAGCGTGGTAGAAAAGCTGGAGCTCTAGCTGCGT
CGTTTTTCTGGATCAAAAGTGGACTCGGAGGTAGATCAGCTTTGTGTGGT
TTGGGACGGTGTGAGGGTGTGTGTCTTTTGAGGCCATAGCCTCGCTCCAG
CAACTGCCATTTCAGGCCGGTGGCAGGGGAATCATTGCCGTGTGGCGTTC
CTGTGCTGGATGGCTCTTCGGAACTGGGAGCTGTGTCGGTTTGCTTCTCT
GCCAGAACAGCAGTTTGCCAGTGGTTGCTGATTTATAGGCATTCTCGAGG
ATCAGGGTGGCTTCGCATTCAGTGTTCAGGTGCCACAGCAGCGGTTCACG
TCCGACACGAAACACGTCGTGTTGGTCACACGTTGTGCTTCAGTCAGGCC
CTTGTACGACCTACGATAGCGTGCGATGGGATGTAGCCCCCACGAGGGAG
AGGTTTGCAATGTTGTCGCTATATTTTGGTCTGGTCTCACGAAGTGTGCC
CTACAGCAGCTACAGCAGTACGAACCGCAACGCGTAACCCGCCTCCGCTA
ATGTAGTGTCGTCGTGTCGCCCGACCGGCAGCTGAGACCGACTGATCCAA
CGCTTGTATTGTGGTGCTGCGTCTCTCTCTTTTGTCGGCTCACGTGTGCT
GGGGCCTCAAATGATGGTTTGCTTTGGCGGCGTGGCGCGAACCGTGGAAA
ACGTTGACGCTGGCCTCCTGGCAGCACCATGCGCACTTCACCTCGCTCCG
GTCAGGTGAGAATCTCCTCCCTGTAGACCGCGACTGCTGCTGTGCAGTGG
TTGATACAGATTACCTTGCTTGGTGTTACCGTATTCCAATTCATCATGCA
GTGTGCACATAGTTGTGCTATTTGGTGTGATGCACACCGGCGATAGTTCG
CTGTCCGCCGTCTCTGCGCGTGGTGCTGTCAAAAGACTGTTGTGGGCAAA
AACTCGACAGAGTTGTTTTGGTCGGCGTGGAAAACGGTAATTGAGACATC
CAGCAGTCGGATACCGCATATTGTACCCAAGGTAAGATCGAGGTAGATCA
CCAGTATACATGTGCCTTCCGGTTGCGCGAGTGGGTGACTGTTGCTGGTG
TGGTCCTGCAGGAACGTTTTGTGCATCGTTCGTGATCCAGAGTCTGCTGC
GGTTGACGCCCTACGAAGATGCCGCCGCGCCTGCCATAACCCATGTTTGA
CTGCCGCCGCTGGCGTCGAGCCCGTTCATGTCGTTGTTGATGCCCAAGTG
AATTGGGCGTCTTTTGTGCCTGCGAAGACACCACTGCTGTTAGTTGCACC
CGCAAGCGATCTGCGCAGAAATATCGACCTGGCACCTCCCCAAAAGCATA
TCAACCAAGCTTCCGCCCCCCATTAGGGTTATTCGTGTTAGGTTCCGCCC
CGGGGGTTGAGGCAAGGGGCTGGAAACCTGCGGTATTTCCACCAGAACTA
CCCTCACAGAGAACAAACGAATGGGAGGTTTGCAGGCACTAGCTTGTGTC
TGTTAATGCCATTGTGCTCCCACTGGTCCAGGTTCCACCGTCCGCAGCAA
GCAGCCCCGGTTTCCCACGGGGCTCCGTGATGGTATTTTTTAACCAGCGG
TACCCAAAGCTTTTGAGACACTCCCAAAGGTCACGCGATCAACATTCTAG
GTAGAGGCCTCTCTACTGCCGTGGCTCTTTTCCATGTAGTACAGACTTGC
ACCAAAAAATTCTACTGCTGATAACGGCTTCAAGCACATAACGATGGACG
CTTTTTCGGCGTGGTGCCGACCAAGGCTCTAGGAAGAGAGGGCGTGTACA
ACAACAGGTCGAGGTACTCCATTGTTTTGGATGGTGTTGTGGAAACCTTT
GTTGGCGTTCCAGATCGACCAATCCAAACAACCTCAGGTCAAGCTGGCGC
GTTCCTGTGACACTGAAGCTTCACACGCTAGCAGACACAACAAAAAAAAC
AGGCCGATTCGGAGATGCGGTTTGGCTGTGCGCCGCGACATCGTTGTCGA
CCAACGTACAGTAGTAGGCCCGATGATGGAAGACGTTGGACGGGGGGTAG
CTTTCATTCGTAGGATCTTCCAAGGTACTTGGCGTAGTACCAGAAGAGGC
CGAGTGCCCGAAGGTTATGCAGTATATGATATCGATGCCCGGAGGGGGAG
CACGTATTCCACCCGAAACAGTTGGGCCATGGATGGGCATAGACAGGCTG
GAAATCGCAGGGATCCGCTGTTACGCCGATCGACGACCGCTCCAGCATGC
CCGCTTACGGGTGCCTCGGCGTAGCAAACCACTCTCTCTTTTTGTAGGCT
ACACGCCTCTTCCAAGGCTTTCACGCAGTCGGGAGCGCTGCCTTGATTTC
GCGTACAGTACACAGCGACCATGGCGCAGCGCATCTGCATCTTTCTTCCA
GGTCGACTACCGTTTTCGCCCGACCGAACACATTTTGTGTACATTCGAAA
TCTCATCTTCGTAAAGAGGAAATGCAGCAGCGCTGCCTGGTGTTGGGCCC
TCCGCGCCTGCACAAGCCTGGAGCGTTTCCCGGACCTGTCGCTGCCGCGT
GCAGCACTCTCTCTGCGTCTAACAGCCTCACGACAGCAAGAACCCTTTCG
ATTTGTACCGACTGACTGGCTGGCTCGATGACGTGCTTTCGAAGGAATCA
GTAGGTTGCCATCACTTGCTGCTATGCATACGTGCTTTTGCGGTCGAGGC
CTCTGGTTTCCTCTGGGTTTCGTCTCTCTTTCCGCGAAGGATGAACCGCC
ACCATTTCCCGCTGCTGTAATTCGAAAGTTTTGCATTTTGCCCGCCTAGC
AGACATTCTGCTGACCCCCCCCCCCCCCATCGCCTCTGAACTGGGTCCCC
CTCTCGTTGTTCGCTTGTGCAGCCCGTGCGGCTGTACGTGAAGGGCGTCA
TGCTTGGCTTCAAGCGTGGCCTTCGGAACACGTACCACCACACCTCCCTC
ATCAAGATCCAGGCAAGCTAGCTAAACGGCACTAATTCGATTTCGTGTGT
GATTTTCTCGTGTTGCGTACCTCCCCTTTCGCCTGACCATGTGTACAAGC
TGGTCGTGATCGTGTGCATGTGCGATGCGTGACCATGAAGAGGGGGCGTG
GTAGCTTGGTTCATGGCCGTTGCTACTGCCGATTGATCGGGATGGGTGCG
CGTCGCGATAATTTTCTTTGAGATGAACAATGCCCCTTATGCTGTGTGGT
GACTGATGATGAGGAATGATATCGAGTTGTTCTTGTGAACTCGTCGCGGA
CTAAAGTTTTTGCCGATTGCAAGGCCTCTCAAATCAACCAACGATCACCT
GATTGGAAGAAGACTGACGGCGATCATGCTCGCCGTTGCTTTTTTTCTTG
TCAGGGTGTGGAGGACAAGGAGGCGTCCAACTTTTACCTCGGGAAGCGCA
TCGCTTACATCTACAAGGTCAGAGTAACAGAGAGAACCGAACGGATAGTA
GCGTTCAACGGTACAAAAGCCAACCCACAAGAGTGTCGTGGCGGTTATCC
TGTCCGCGTGCCCCCACGGTAGACGGTAGCGTCGGGTGTGCTTGTAGTGA
TTGCACGCTTTGCGGTTTCCCCAGTGTTTTCTCGCACTTTAGACTCCTCT
GGATCGAAGATGTTGTTGCTGTCGAATCCGTCAGAGCTGGTAGAAGCCAC
GCGCGTACAAGGCACGTGTAGATCACAGCGCGCTTCTTCCTCCGATATTT
TTCCGTGGTGGTTTATGTTTGATGTACCTTGGCGTGTCAAGGTCTGCTGT
ATGAGTGTCAGAAAAGGATGCCGAGGGTACAGCCGCGAATGGGTCGAATG
CATGACCTCAATCTCCCGACGTGTGGATGTTTCGCTGCAAGCGCCGGACG
CTTGTCGCGACACTATTTCAAGTGTTTCCTCACGACGTGCTCTCTCTAGA
CCGTGCCATTTGGTGCTATCACGAGCGACAGGAAGACGGCTCGCGATCCT
AGATGAGTAGGTACGGTTGGAGCGTTGTTGAACAATTGCTTAAGGGAGGG
TATTGATGCCCTTACCCTGGTTCTGGTACACCGTTGCTGCTGCTGCTGCT
GTGATTGGTGGTTTGCAGGCGAAGACGCTCAAGAACGGGACCAAGTACCG
CGTGGTGTGGGGCAAGGTGTGCCGCGGGCACGGCACCAACGGGGTTGTAC
GGGCCAAGTTCAGGACTAACCTCCCGGTAAGCAAGCAGCAAGCATGCTTC
CTGAACTTGCGTTGTCGGTGGCCTCTGTTTCATGCGTGAAGGGTTTTGTT
TTTGGTTGTTGGGGGCACTCCTGTGGGTTGTGGAGCATGTCTCGTTTGGA
ATCCCCCCCCCCGGATGATATCTCTCCAACATTGCCCTCTTTGTCACCGG
CAGAGCGGTGGAGCTTTGAGGTTCGGTCCGAAGTATAGACCGTAGGCGCG
TGAAGCTTCGCTTCAGTGCCAGTCTCGCAAAATTCGGAGGGTTGTGTTGG
TAATTGGAGGAGGTGGAGGAGCGTGCAGAGTTTTTTTGCAAGAAGAGACA
TGGCATGACCACGGTTCTTGACGCACTTTGAAAATCGCCGGAAATTAAGG
GTGCGAGTTTGTTCTTGTATTCGCTCGTACAGTGTTTGCGTGGGGGCCTT
CATGTTTGGTACTCTCTCTTCTCCGTCGTGCCACCACCCGTCTCACCCCC
CCCTCTCTCCCCGCCCTCCGCCCTCCCCCTCCCCGCTTCTCTCCCGTCGC
AGCCCAAGGCAATCGGTGCTCCCGTGCGCGTGATGCTCTACCCATCAAAG
ATCTAACTCTGCAGTGTGGCGAGCTATCTGTTTGGAAATGATCCCGGACG
GCCAATTGTAGCCAAGCCAGCGAGGCCTGTTGGCGATCAAGGCGCGTGCG
GTACGTCCGTCGAAGAGGATAGCCACCTCCGGCGGTCCGTGTCGTAGTCT
TTGCCCAGCGCGGACATGGCGGCTAGGTTGTTGGAAGGGGTGGAGAGGCG
GACGTACGTGAGCGCGGCGAAATGAACAAGCACACGCTGCCGAGTGCTGG
CTGTTGTTTTCGCGGTTTGCATCTGGTGACGGTGTTTTAGCGTCGAGGCT
GTGGTGCGTTCGTTCGGTGGGGGGTGAATATAAAGCTTCACGACCTACCC
GCAGGTTGAACAAAAAAAATGAAACTCCAATTACTCACAAACCACGTCTC
AACAAAGCACACCGTGTTTCCCACCTCCCTATCGTCCACGGAACGGTACA
ATACCGCGGTACAACGGTCGTGAACGCATGCATAGAGAGGACATGTGCTG
GGACAACCGCATGCCTCGATTCGCTCCTCACCGGTGGTGCTTGCGTGTCC
TTTTACGTATGCATACATGTGTACGAGCGTCACGTTCGAGCTTGTTCACC
GATCGGTACGAGTCACTATTTAGCTTGACGAATTCAATCATGAGCGCGGT
GTGTGTTGCTCACACAGAGCAGAAGGGCTGTCGTACAAGGGGCACCTCGC
AACGTTCCAGCTGTCCATTACAGTAGATGGCTTGGTGTTGTAGTTAGCGT
TTGTGCTTGTTCCTCCGCCGCCGGGAAAAAACCCAAAGACCTCTGTCGTG
GTGACCCGTTTCGGTGTGATACCAGTATTGTTGTTGTGTTCGGGATTGCT
CATCTTCGACGACACCGAGTAGGACCCACCCACCATTGTTCCGAGGTGGG
GAGAGCCAACGGAGAGTAATAAATGCAACACACGTTCAACACGTCCGTGT
TTGTACACGTTTGCAACAACACGTCCCGGACACACCTGTGGCTGAACTGA
CGTAGGCACCACACACACAAACCCAGAGAACCGGTCCTGACCCCCTTAGA
TGTTTTC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:497825..503631- >mRNA_E-siliculosus-1a_M_contig97.17668.1 ID=mRNA_E-siliculosus-1a_M_contig97.17668.1|Name=mRNA_E-siliculosus-1a_M_contig97.17668.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=684bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:497825..503631- (Ectocarpus siliculosus Ec864m_EcPH12_78m male) ATGCGCACTTCACCTCGCTCCGGTCAGATGCGCACTTCACCTCGCTCCGG TCAGCCCGTGCGGCTGTACGTGAAGGGCGTCATGCTTGGCTTCAAGCGTG GCCTTCGGAACACGTACCACCACACCTCCCTCATCAAGATCCAGCCCGTG CGGCTGTACGTGAAGGGCGTCATGCTTGGCTTCAAGCGTGGCCTTCGGAA CACGTACCACCACACCTCCCTCATCAAGATCCAGGGTGTGGAGGACAAGG AGGCGTCCAACTTTTACCTCGGGAAGCGCATCGCTTACATCTACAAGGGT GTGGAGGACAAGGAGGCGTCCAACTTTTACCTCGGGAAGCGCATCGCTTA CATCTACAAGGCGAAGACGCTCAAGAACGGGACCAAGTACCGCGTGGTGT GGGGCAAGGTGTGCCGCGGGCACGGCACCAACGGGGTTGTACGGGCCAAG TTCAGGACTAACCTCCCGGCGAAGACGCTCAAGAACGGGACCAAGTACCG CGTGGTGTGGGGCAAGGTGTGCCGCGGGCACGGCACCAACGGGGTTGTAC GGGCCAAGTTCAGGACTAACCTCCCGCCCAAGGCAATCGGTGCTCCCGTG CGCGTGATGCTCTACCCATCAAAGATCTAACCCAAGGCAATCGGTGCTCC CGTGCGCGTGATGCTCTACCCATCAAAGATCTAA back to top
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