prot_E-siliculosus-1a_M_contig97.17661.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig97.17661.1
Unique Nameprot_E-siliculosus-1a_M_contig97.17661.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length320
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17661.1 vs. uniprot
Match: A0A6H5L0F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0F7_9PHAE)

HSP 1 Score: 490 bits (1261), Expect = 7.770e-173
Identity = 267/312 (85.58%), Postives = 274/312 (87.82%), Query Frame = 0 
Query:    8 MPPPQQQPGNECAPGFQCTPRLTFWIIAASSWVVWIFAVSAAADDKWIKDNGQGDWLAAGEDPVLTFCEELDDADDDDVLDADEYKDFVSICDLYRAFTAMQMLATIVCSVSVLLLALAFFRPEAGKCASARTLAFVGGALMATYALFQLVAVVLAGVLAQEFDNLPNDDDTSYFSGYDGSYSFWDAGYEAEVGATFGVGVTALILAVIMTVALCLCARRTGDGPLYKCCHSLMLANKSNGIPRSGNEGGVGGGGGKGVPVVADLRKGSQPTSVAAARPGATEQLLQQXXXXXXXXXRQPPPRYDTLPSAGV 319
            MPPPQQQ GNECAPGFQCTPRLTFW+IAASSW+VWIFAVSAAADDKWIKDNGQGDWLAAGEDPVL  C+ LDDA DDD+L  DEYKDFVSICDLYRAFTAMQMLATIVCSVSVLLLALAFFRPEAGKCAS RTLAFVGGALMATYALFQLVAVVLA VLAQEFDNLPNDDDTSY SGYDG Y+F++AGYEAEVG TFGVGVTALILAVIMTV LCLCA RTGDGPLYKCCHSLMLANKSNGIP SG EGG      KGVPVVADL     P SVAAARPGATEQ  Q XXXXXXXXX   PP Y  LPSA V
Sbjct:    1 MPPPQQQQGNECAPGFQCTPRLTFWVIAASSWLVWIFAVSAAADDKWIKDNGQGDWLAAGEDPVLNLCDGLDDAADDDLLATDEYKDFVSICDLYRAFTAMQMLATIVCSVSVLLLALAFFRPEAGKCASTRTLAFVGGALMATYALFQLVAVVLAAVLAQEFDNLPNDDDTSYLSGYDGFYTFFEAGYEAEVGPTFGVGVTALILAVIMTVVLCLCATRTGDGPLYKCCHSLMLANKSNGIPSSGGEGGXXXXXXKGVPVVADL-----PASVAAARPGATEQPSQXXXXXXXXXXXXXPPPYGILPSAEV 307
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17661.1 vs. uniprot
Match: A0A6H5KJK8_9PHAE (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJK8_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.050e-43
Identity = 93/223 (41.70%), Postives = 131/223 (58.74%), Query Frame = 0 
Query:   25 CTPRLTFWIIAASSWVVWIFAVSAAADDKWIKDNGQGDWLAAGEDPVLTFCEELDDADDDDVLDADEYKDFVSICDLYRAFTAMQMLATIVCSVSVLLLALAFFRPEAG-KCASARTLAFVGGALMATYALFQLVAVVLAGVLAQEFDNLPNDDDTSYFSGYDGSYSFWDAGYEAEVGATFGVGVTALILAVIMTVALCLCARRTGDGPLYKCCHSLMLANKS 246
            CTPRLTFWI  A  WV+W+FAV+A+ADDKW K +G    + AG++ +L  C+  DD                 +C LY+AFTAMQ +A +V SVS++L  LA FRP AG KC S ++LA   G+LM  +A F+++A VL  V+ +E D   N   T +  G            EA++GATFG+ V A++L V+  V++   AR +GDGP +KC +  M  N +
Sbjct:   72 CTPRLTFWISCALGWVIWVFAVAASADDKWAKIDGFD--IGAGDEDILDDCDSSDD-----------------VCSLYKAFTAMQFIAAVVVSVSMVLFTLALFRPAAGLKCCSVKSLAIAAGSLMMAFAFFEMLAFVLIIVIEKELDGEFN---TGFGFG------------EADLGATFGLAVVAVVLGVVQAVSVLTFARSSGDGPFFKCLNECMAMNNA 260
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17661.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0F7_9PHAE7.770e-17385.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJK8_9PHAE1.050e-4341.70WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.140.150coord: 32..238
e-value: 7.1E-7
score: 30.7
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 226..319
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..225
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 168..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 129..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..128
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..109
NoneNo IPR availableTMHMMTMhelixcoord: 203..225
NoneNo IPR availableTMHMMTMhelixcoord: 106..128
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
NoneNo IPR availableTMHMMTMhelixcoord: 29..51
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 80..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig97contigE-siliculosus-1a_M_contig97:403132..406858 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig97.17661.1mRNA_E-siliculosus-1a_M_contig97.17661.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig97 403132..409534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig97.17661.1 ID=prot_E-siliculosus-1a_M_contig97.17661.1|Name=mRNA_E-siliculosus-1a_M_contig97.17661.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=320bp
MSQPVVTMPPPQQQPGNECAPGFQCTPRLTFWIIAASSWVVWIFAVSAAA
DDKWIKDNGQGDWLAAGEDPVLTFCEELDDADDDDVLDADEYKDFVSICD
LYRAFTAMQMLATIVCSVSVLLLALAFFRPEAGKCASARTLAFVGGALMA
TYALFQLVAVVLAGVLAQEFDNLPNDDDTSYFSGYDGSYSFWDAGYEAEV
GATFGVGVTALILAVIMTVALCLCARRTGDGPLYKCCHSLMLANKSNGIP
RSGNEGGVGGGGGKGVPVVADLRKGSQPTSVAAARPGATEQLLQQQQHQQ
AQPQRQPPPRYDTLPSAGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS