Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17654.1 vs. uniprot
Match:
D7FTQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ2_ECTSI)
HSP 1 Score: 693 bits (1788), Expect = 1.770e-237
Identity = 396/416 (95.19%), Postives = 403/416 (96.88%), Query Frame = 0
Query: 235 MLHHQHQQQQSEVVDRGLRELSAAIVRVETKLSLDSSEASQLREALRMLRSEKEAYVREKASTAARMEAVSREYDILNRRVAVAEAELGRRSGRLRKAEVDREKTQAALSVRAQQLATGFGMEKERFSREMQSAEAQQGTGGPVAVAAEKHKIDRGYRDRLRVLSDGLASTQLQLATLKSNRSKLAALEVEARKDLATQVARLEAQLKRAGEGIEKEKADMEKLLLNLSNALSGVDVQLTQSAGMTPSRETSRALRRAKEDFRLNQRRVKLLLEKQRQRYDATSSVVEEEAQRLKSKTNELVSLRAELIEREGKEKDLKSNVAVLGKRVSSLDHDLWKTRSALAHEQRLRHEAQAALVKSEEEREKQTKRLWSELRATRDSATSARQVYEGTVEQREDWRKAIEEEKRAKIEAAER 650
MLHHQHQQQQSE VDRGLRELSAAIVRVETKLSLDSSEASQLREALRMLRSEKEAYVREK STAARMEAVSREYDILNRRVAVAEAELGRRSGRLRKAEVDREKTQA LSVRAQQLATGFGMEKE+FSREMQSAEAQQGTGGP AVAAEKHKIDRGYR+RLRVLSDGLASTQLQLATLKSNRSKLAALEVEARKDL TQVARLEAQLKRAG+GIEKEK DMEKLLLNLSNALSGVD QLTQSAGMTPSRETSRALRRAKEDFRLNQRRVKL LEKQRQRYDATSSVVEEEAQRLKSKTNELVSLRAE+IEREGKEKDLKSNVAVLGKRVSSLDHDLWK RSALAHEQRLRHEAQAALVKSEEE EKQTK LWSELRATRD+ATS RQVYEGTV+QR+DWRKAIEE KRAKIEAAER
Sbjct: 1 MLHHQHQQQQSEAVDRGLRELSAAIVRVETKLSLDSSEASQLREALRMLRSEKEAYVREKTSTAARMEAVSREYDILNRRVAVAEAELGRRSGRLRKAEVDREKTQATLSVRAQQLATGFGMEKEKFSREMQSAEAQQGTGGPAAVAAEKHKIDRGYRERLRVLSDGLASTQLQLATLKSNRSKLAALEVEARKDLTTQVARLEAQLKRAGDGIEKEKTDMEKLLLNLSNALSGVDFQLTQSAGMTPSRETSRALRRAKEDFRLNQRRVKLHLEKQRQRYDATSSVVEEEAQRLKSKTNELVSLRAEVIEREGKEKDLKSNVAVLGKRVSSLDHDLWKNRSALAHEQRLRHEAQAALVKSEEEWEKQTKSLWSELRATRDAATSTRQVYEGTVKQRDDWRKAIEEGKRAKIEAAER 416
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
100 200 300 400 500 600 700 800 900 1000 1100 1200 Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = 0.545 Score = Sequence Coil Coil Coil Coil Coil Coil PTHR23159 SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE SIGNAL_PEPTIDE_N_REGION NON_CYTOPLASMIC_DOMAIN SignalP-noTM TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 577..604 None No IPR available COILS Coil Coil coord: 630..682 None No IPR available COILS Coil Coil coord: 521..541 None No IPR available COILS Coil Coil coord: 273..293 None No IPR available COILS Coil Coil coord: 301..321 None No IPR available COILS Coil Coil coord: 427..454 None No IPR available PANTHER PTHR23159 CENTROSOMAL PROTEIN 2 coord: 210..842 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 20..23 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 9..19 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..23 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..8 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 24..1232 None No IPR available SIGNALP_EUK SignalP-noTM SignalP-noTM coord: 1..28 None No IPR available TMHMM TMhelix coord: 7..24
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_M_contig97.17654.1 ID=prot_E-siliculosus-1a_M_contig97.17654.1|Name=mRNA_E-siliculosus-1a_M_contig97.17654.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1233bp back to top