mRNA_E-siliculosus-1a_M_contig97.17648.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17648.1 vs. uniprot
Match: A0A6H5KT89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT89_9PHAE) HSP 1 Score: 966 bits (2496), Expect = 0.000e+0 Identity = 584/618 (94.50%), Postives = 597/618 (96.60%), Query Frame = 1
Query: 1 MRCLSAAIMLLAVADQADGFYCAPSRIGGRASRCTAVSSSRKASSSTWSTRPATPSQGRSRSGYVLQASSTEPRDKDAPEGDRAGAEKKKGGEGEGAEDAVLATPAESRTALLSKRVAEEGKTANKRAKRMANLSSQLKRSFAKKEEVETMIAEEVAQLGTKLRQERDIEIARAADLKELLKEFDETIVEKQAEIEKEQDLLAQMQA--LRGQVDEASIRAPIETAMAKKADVTSIEVMLLEDLVECKEKLEEELKSTSARGEIMNGVVAALPAEGDIARLRAYNWQDVQDLQEVLVSSAESMEASDAQVGLLRTRLMDSVQQKKEVLGEVSKAELVEGGGRG---ARKMTTARAFQASTELSEEELLQAVTESSKNTALGVAKSVSAGTSSLGDYLRSPAGQDVAASTVLVIGALAGAASSVANAFKAAKKEFDENAISGEELTSFDKILKSLQSSLKAVQESPAVKAELREAGDLLTKQVPQASARVGAGTAEAIKGAVANSEISNPVKDALDSLEQFIVSLAALGSKYFTVSRAARFQLPGGSKETDEQRKANAKLPSLSPPPKPMDELVAQKSXXXXXXXXXXXXXXXXXX-ESSPAPAXXXXVPPVAKPAAEE 1836
MRCLSAAIMLLAVADQADGFYCAP +IGGRASRC+AVSSSRKASSSTWSTRP TPSQGRSRSGYVLQASSTEPRDKDAPEGD+ GAEKKKGGEG GAEDA LATPAESRTALLSKRVAEEGKTAN+RAKRMANLSSQLKRSFAKKEEVETMI EEVAQLGTKLRQERDIEIAR ADLKELLKEFDETIVEKQAEIEKEQDLLAQMQA LRGQVDEASIRAPIETAMAKKADVTSIEVMLLEDLVECKEKLEEELKSTSAR E MNGVVAALPAEGDIARLRAYNWQDVQDLQEVLVSSAESMEASDAQVGLLRTRL+DSVQQKKEVLGEVSKAELV GGGRG A+KMTTARAFQASTELSEEELLQAVTESSKNTALGVAKSVSAGTSSLGDYLRSPAGQDVAASTVLVIGALAGAA+SVANAFKAAKKEFDENA+SGEELTSFDKILKSLQSSLKAVQESPAVKAELREAGDLLTKQVPQASARVGAGTAEAIKGAV NSEISNPVKDALDSLE+F+VSLAALG+KYFTVSRAARFQLPGG+KET+EQRKANAKLPSLSPPPKPMDELVAQK XXXXXXXXXXXXXXXXXX ESSPAP XXXX PPVAKPA EE
Sbjct: 16 MRCLSAAIMLLAVADQADGFYCAPGQIGGRASRCSAVSSSRKASSSTWSTRPTTPSQGRSRSGYVLQASSTEPRDKDAPEGDKVGAEKKKGGEGGGAEDAALATPAESRTALLSKRVAEEGKTANQRAKRMANLSSQLKRSFAKKEEVETMITEEVAQLGTKLRQERDIEIARGADLKELLKEFDETIVEKQAEIEKEQDLLAQMQASALRGQVDEASIRAPIETAMAKKADVTSIEVMLLEDLVECKEKLEEELKSTSARAETMNGVVAALPAEGDIARLRAYNWQDVQDLQEVLVSSAESMEASDAQVGLLRTRLLDSVQQKKEVLGEVSKAELVAGGGRGGRGAKKMTTARAFQASTELSEEELLQAVTESSKNTALGVAKSVSAGTSSLGDYLRSPAGQDVAASTVLVIGALAGAAASVANAFKAAKKEFDENAVSGEELTSFDKILKSLQSSLKAVQESPAVKAELREAGDLLTKQVPQASARVGAGTAEAIKGAVTNSEISNPVKDALDSLEEFVVSLAALGTKYFTVSRAARFQLPGGTKETEEQRKANAKLPSLSPPPKPMDELVAQKXXXXXXXXXXXXXXXXXXXXESSPAPXXXXXAPPVAKPADEE 633
BLAST of mRNA_E-siliculosus-1a_M_contig97.17648.1 vs. uniprot
Match: D7FTP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP6_ECTSI) HSP 1 Score: 649 bits (1675), Expect = 1.720e-222 Identity = 503/560 (89.82%), Postives = 508/560 (90.71%), Query Frame = 1
Query: 613 MQALRGQVDEASIRAPIETAMAKKADVTSIEVMLLEDLVECKEKLEEELKSTSARGEIMNGVVAALPAEGDIARLRAYNWQDVQDLQEVLVSSAESMEASDAQVGLLRTRLMDSVQQKKEVLGEVSKAELVEGGGRGARKMTTARAFQASTELSEEELLQAVTESSKNTALGVAKSVSAGTSSLGDYLRSPAGQDVAASTVLVIGALAGAASSVANAFKAAKKEFDENAISGEELTSFDKILKSLQSSLKAVQESPAVKAELREAGDLLTKQVPQASARVGAGTAEAIKGAVANSEISNPVKDALDSLEQFIVSLAALGSKYFTVSRAARFQLPGGSKETDEQRKANAKLPSLSPPPKPMDELVAQKSXXXXXXXXXXXXXXXXXXESSPAPAXXXXVPPVAKPAAEEXTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTPPAPEVXXXXXXXXXXXXXXXXXEEKKPAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLDGAAPATPPSAPVGAGEKAPQ 2292
MQALRGQVDEASIRAPIETAMAKKADVTSIEVMLLEDLVECKEKLEEELKSTSARG+ MNGVVAALPAEGDIARLRAYNWQDVQDLQ VLVSSAESMEASDAQVGLLRT+LMDSVQQKKEVLGEVSKAELVEGGGRGARKMTTARAFQASTELSEEELLQAVTESSKNTALGVAKSVSAGTSSLGDYLRSPAGQDVAASTVLVIGALAGAASSVANAFKAAKKEFDENAISGEELTSFDKILKSLQSSLKAVQESPAVKA+LREAGDLLTKQVPQASARVGAGTAEAIKGA ANSEISNPVKDALDSLEQF+VSLAALG+KYFTVSRAARFQLPGGSKETDEQRKANAKLPSLSPPPKPMDELVAQK XXXXXXXXXXXXXXXX ESSP PA VPPVAK X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX STPPAPEV XXXXXXXX E XXXXXXXXXXXXXXXXXX VLDGAAPATPPSA VGAGEKAPQ
Sbjct: 1 MQALRGQVDEASIRAPIETAMAKKADVTSIEVMLLEDLVECKEKLEEELKSTSARGDTMNGVVAALPAEGDIARLRAYNWQDVQDLQGVLVSSAESMEASDAQVGLLRTQLMDSVQQKKEVLGEVSKAELVEGGGRGARKMTTARAFQASTELSEEELLQAVTESSKNTALGVAKSVSAGTSSLGDYLRSPAGQDVAASTVLVIGALAGAASSVANAFKAAKKEFDENAISGEELTSFDKILKSLQSSLKAVQESPAVKAQLREAGDLLTKQVPQASARVGAGTAEAIKGAAANSEISNPVKDALDSLEQFVVSLAALGTKYFTVSRAARFQLPGGSKETDEQRKANAKLPSLSPPPKPMDELVAQKXXXXXXXXXXXXXXXXXR-ESSPVPAAGASVPPVAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTPPAPEVSAQKXXXXXXXXKPVVEEXXX---XXXXXXXXXXXXXXXXXXXAVVAADKPAAEKSAASPVLDGAAPATPPSAAVGAGEKAPQ 556
BLAST of mRNA_E-siliculosus-1a_M_contig97.17648.1 vs. uniprot
Match: A0A835Z020_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z020_9STRA) HSP 1 Score: 207 bits (526), Expect = 1.060e-55 Identity = 133/332 (40.06%), Postives = 203/332 (61.14%), Query Frame = 1
Query: 613 MQALRGQVDEASIRAPIETAMAKKADVTSIEVMLLEDLVECKEKLEEELKSTSARGEIMNGVVAALPAEGDIARLRAYNWQDVQDLQEVLVSSAESMEASDAQVGLLRTRLMDSVQQKKEVLGEVSKAELV-----------EGGGRGARKMTTARAFQASTELSEEELLQAVTESSKNTALGVAKSVSAGTSSLGDYLRSPAGQDVAASTVLVIGALAGAASSVANAFKAAKKEFDENAISGEELTSFDKILKSLQSSLKAVQESPAVKAELREAGDLLTKQVPQASARVGAGTAEAIKGAVANSEISNPVKDALDSLEQFIVSLAALGSK 1575
MQ ++ QV E +IRA + AMAKKAD+ SIEV+LLED+ +C+E+L EL ST R + ++GVVAALP D +R R Y+W+D+Q LQ++L+ S +SM SD +V LRT+ D+V+QK+EVLGE+ V EG +G+ + + + LS++EL A +SSK+ A+ + K+V+ G SLGDYL+SP Q +AA+ V + G ++ +F A K F +N + GEE+TSFD + K+ + ++K+VQ S V A L + + VP + ++G EAIK A N E+ + +AL +++ +V+LA LG+K
Sbjct: 1 MQLVKAQVKEDAIRAQFQAAMAKKADLISIEVILLEDMSDCREQLVAELASTVTRVDRIDGVVAALPRSDDRSRARLYDWEDIQSLQDLLLESVQSMLDSDTKVAALRTKFEDAVRQKREVLGEIPAPSTVIEVVPEGGSGGEGAAQGSAALRPRVDLSSVSALSKDELSAAAGKSSKDAAVALGKTVAVGAQSLGDYLKSPKAQSLAATVVDLFQNTGGYFKAIGESFSVATKVFQQNTLPGEEITSFDTMFKTARDAVKSVQTSEEVAAALADVKQK-GQAVPSTAGKIGQLAGEAIKDAQQNKELGTALAEALSNVQSALVALAGLGTK 331
BLAST of mRNA_E-siliculosus-1a_M_contig97.17648.1 vs. uniprot
Match: A0A6U1MNE3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MNE3_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.080e-26 Identity = 115/451 (25.50%), Postives = 237/451 (52.55%), Query Frame = 1
Query: 379 RAKRMANLSSQLKRSFAKKEEVETMIAEEVAQLGTKLRQERDIEIARAADLKELLKEFDETIVEKQAEIEKEQDLLAQMQALRGQVDEASIRAPIETAMAKKADVTSIEVMLLEDLVECKEKLEEELKSTSARGEIMNGVVAALPAEG-DIARL-RAYNWQDVQDLQEVLVSSAESMEASDAQVGLLRTRLMDSVQQKKEVLGEVSKAELVEGGGRGA---RKMTTARAFQAST----------------ELSEEELLQAVTESSKNTALGVAKSVSAGTSSLGDYLRSPAGQDVAASTVLVIGALAGAASSVANAFKAAKKEFDENAISGEELTSFDKILKSLQSSLKAVQESPAVKAELREAGDLLTKQVPQASARVGAG------TAEAIKGAVANSEISNPVKDALDSLEQFIVSLAALGSKYFTVSRAARFQLPGGSKETDEQRKA 1650
R +R+ +S L +S KK+++E +A EV + ++ ++ + +K LL + D + K+A+++KE++LL M+ ++ ++++A++R +E A++ KA++ +IE+++ ++L C +L ++ T R ++M + +LP +G D+ L R Y+W++VQ+LQE+L+ S E+ + + ++ ++ + ++++Q++ VL V EL+ GGR A K RA Q +++E ++L +S + A ++V A S G +++S GQD A + V + + G +SV + + F+ N++ G+++T+F I S ++ ++ +S E++E+ + + V QA VG T +AI G +A EI + + S ++ +++LAA G+K + LP + Q+K+
Sbjct: 39 RMRRIDGMSQSLGKSLMKKQQIEETLAVEVEGIRQEMAYMLKEDLRDSEQMKVLLADLDLALTSKKAQVKKEENLLLNMEEVKERIEDAALRELMECAISAKANLVAIEMVVAQELETCIVQLRANIQDTRERCDLMKVALDSLPGQGQDLQALARQYSWEEVQELQELLLDSIEACQERNFKINNIKLKFAEALRQRQSVLEGV---ELLNAGGRAALYPSKEQQRRAQQVGAMAEVMKAASVKLTITRDMTEVDMLNVAKDSLVDFATNSTQAVGAIVISTGQWVQSEQGQDAAGAVVNAVTGVTGFFASVKDVVVTVVETFNNNSVKGDDMTNFKIIANSFINATASIPKSK----EVQESVNNMNANVKQA---VGGTSDFLQLTGDAIAGGMATPEIYKALVCSSVSAQKLLIALAATGAKLVKADKL----LPPAKADAPPQQKS 475 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig97.17648.1 >prot_E-siliculosus-1a_M_contig97.17648.1 ID=prot_E-siliculosus-1a_M_contig97.17648.1|Name=mRNA_E-siliculosus-1a_M_contig97.17648.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=765bp MRCLSAAIMLLAVADQADGFYCAPSRIGGRASRCTAVSSSRKASSSTWSTback to top mRNA from alignment at E-siliculosus-1a_M_contig97:213258..225795- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig97.17648.1 ID=mRNA_E-siliculosus-1a_M_contig97.17648.1|Name=mRNA_E-siliculosus-1a_M_contig97.17648.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=12538bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:213258..225795- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:213258..225795- >mRNA_E-siliculosus-1a_M_contig97.17648.1 ID=mRNA_E-siliculosus-1a_M_contig97.17648.1|Name=mRNA_E-siliculosus-1a_M_contig97.17648.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=4590bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:213258..225795- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |