mRNA_E-siliculosus-1a_M_contig97.17640.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17640.1 vs. uniprot
Match: D7FTZ5_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ5_ECTSI) HSP 1 Score: 829 bits (2142), Expect = 4.700e-301 Identity = 420/441 (95.24%), Postives = 427/441 (96.83%), Query Frame = 1 Query: 1 MSDEEPWEPLAFVDYLMLGIVCTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTFAGFAWTGAAAVGHGLIQRSEDDFLANCYLESTDAVPTCRTRLFRVQVLLLSSTGLIPLLLAILDPALYVFDETANSCGTSTGATRVVLGMDALGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTFLLFSYAIVVAVILDGHHCYVRRVAIVWEPFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYVEAKVAHELVDFYLDSLDREEIEEYFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPTTGTSPIDTEVPSPSSPDGVLGPFRRLSLVGRMLFSSSLGPARSSLSSAAPQDAGTG 1323
M D+EPWEPLAFVDYLMLGIVCTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTFAGFAWT AAAVGHGLIQRSEDDFLANCY ESTDAVP C TRLFRVQVLLLSSTGLIPLLLAILDP L+ FDETANSCGTSTGATRVVLGMDA GFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLT LLFSYAIVVA+ILDGHHCYVRRVAI WEPFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRY+EAKVAHELVDFYLDSLDREEI EYFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVMETNFQTDFVETEGFRRIV+AAELEQRQIRLLQAEGFLLP TGTSP DTEV SPSSPDGVLGPFRRLSLVGRMLFSSS+GPAR+SLSSAAPQDAGTG
Sbjct: 1 MPDKEPWEPLAFVDYLMLGIVCTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTFAGFAWTFAAAVGHGLIQRSEDDFLANCYFESTDAVPACPTRLFRVQVLLLSSTGLIPLLLAILDPDLFFFDETANSCGTSTGATRVVLGMDAFGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTILLFSYAIVVAIILDGHHCYVRRVAIAWEPFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYIEAKVAHELVDFYLDSLDREEIMEYFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVMETNFQTDFVETEGFRRIVNAAELEQRQIRLLQAEGFLLPNTGTSPTDTEVLSPSSPDGVLGPFRRLSLVGRMLFSSSVGPARTSLSSAAPQDAGTG 441
BLAST of mRNA_E-siliculosus-1a_M_contig97.17640.1 vs. uniprot
Match: D7FTZ7_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ7_ECTSI) HSP 1 Score: 535 bits (1377), Expect = 2.980e-185 Identity = 296/457 (64.77%), Postives = 337/457 (73.74%), Query Frame = 1 Query: 1 MSDEEPWEPLAFVDYLMLGIVCTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTFAGFAWTGAAAVGHGLIQRSEDDFLANCYLESTDAVPTCRTRLFRVQVLLLSSTGLIPLLLAILDPALYVFDETANSCGTSTGATRVVLGMDALGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTFLLFSYAIVVAVILDGHHCYVRRVAIVW--------------EPFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYVEAKVAHELVDFYLDSLDREEIEEYFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPTTGTSPIDTEVP-SPSSPDG-VLGPFRRLSLVGRMLFSSSLGPARSSLSSAAPQDAGTG 1323
MSDEEPWEPL FVDY+MLG+V FQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMT AGFAWT A+A+ G+I+RSE DFLANCY E + T + V + + L D+ A VVL M+ALGF I LW VCARQLRWVRKQFNEYEAMKWTLSCLT LLFSYA VVA++L+ H YVRRVAIV+ EP K KL G+ EYLYSFT+GFSEMPSPAQLKA+LA+QLSV+QLRVEFR+YVE VA ELVDFYLDSLDREEI+ YF RQAATMRIV+QYIREG+PDQVNISGECR+EILST VTAYDIFDRARAEVL VMETNFQ DF+ETEGFRRIVDA+ELEQRQ+RLL+AEG L+P+ T+P+ P S SP G +L RRL LVGR+ SS ++S ++ AG+G
Sbjct: 1 MSDEEPWEPLTFVDYVMLGMVGAFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTLAGFAWTFASALETGIIERSEGDFLANCYFEVIFSWSTLLAHMMSFAVRVYRMWRI-----------LIKHDDHMWP------AKNVVLAMNALGFYAICYLWFVCARQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIVLNNQHVYVRRVAIVYPVLTTYTLLWGSIGEPIKRKLAGDTEYLYSFTKGFSEMPSPAQLKASLAEQLSVQQLRVEFRKYVETMVAQELVDFYLDSLDREEIKGYFGRQAATMRIVEQYIREGSPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMETNFQRDFIETEGFRRIVDASELEQRQMRLLRAEGVLVPSASTTPVRLAAPPSIFSPRGRLLDSCRRLPLVGRLFSFSSPSAVAHAVSRSSTPGAGSG 440
BLAST of mRNA_E-siliculosus-1a_M_contig97.17640.1 vs. uniprot
Match: A0A6H5JJQ0_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ0_9PHAE) HSP 1 Score: 514 bits (1324), Expect = 3.030e-177 Identity = 278/454 (61.23%), Postives = 316/454 (69.60%), Query Frame = 1 Query: 1 MSDEEPWEPLAFVDYLMLGIVCTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTFAGFAWTGAAAVGHGLIQRSEDDFLANCYLESTDAVPTCRTRLF-----------------------RVQVLLLSSTGLIPLLLAILDPALYVFDETANSCGTSTGATRVVLGMDALGFSMILCLW----------------------------LVCARQLRWVRKQFNEYEAMKWTLSCLTFLLFSYAIVVAVILDGHHCYVRRVAIVW--------------EPFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYVEAKVAHELVDFYLDSLDREEIEEYFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPTTGTS 1167
MSDEE WEPL VDY+MLG V T QAFALGVC+HL+ WR WPPYVTKNVDIVI+MTF GF WT + A+ +GL +RSE D LA CYLE A P T +F + Q++LLSS L P L+A+L P YVFDET N C T++ + V L M+A+GF I +W VC RQLRWVRKQFNEYE MKWTLSCLT LLFSYA+VV V+LDG H VRRVAIV+ EP K T + EYL+SFT+GFS++PSPAQLKA+LA+QLSVEQLR EFRRY+E KVA ELVDFYLDSLDREEI+EYFARQA TMRIV QYIREGAPDQVNISGECR+EILSTHVTAYDIFDRAR EVL VMETNFQ +FVETEGFRRIV+A+ELEQR+ RLL+A GFL P T S
Sbjct: 1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLLSWRHWPPYVTKNVDIVIVMTFGGFGWTISVALDNGLFRRSEGDILAKCYLERLLAWPALCTHMFAFFIRVYRMWRILVKHDENMWPAKYQIMLLSSISLTPALVALLVPGAYVFDETVNLCTTTSTSRTVTLAMNAVGFYTICYIWWRQSYVHVPATGLMRAVCALVSLAAKTRFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDGQHVIVRRVAIVYPALTTHTVLWGSIGEPVLKKWTRDEEYLWSFTKGFSDLPSPAQLKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTHVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVEASELEQRENRLLRAGGFLPPDTPPS 454
BLAST of mRNA_E-siliculosus-1a_M_contig97.17640.1 vs. uniprot
Match: D7FTZ9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ9_ECTSI) HSP 1 Score: 477 bits (1227), Expect = 5.970e-163 Identity = 261/428 (60.98%), Postives = 303/428 (70.79%), Query Frame = 1 Query: 1 MSDEEPWEPLAFVDYLMLGIVCTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTFAGFAWTGAAAVGHGLIQRSEDDFLANCYLESTDAVPTCRTRLF-----------------------RVQVLLLSSTGLIPLLLAILDPALYVFDETANSCGTSTGATRVVLGMDALGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTFLLFSYAIVVAVILDG-HHCYVRRVAIVW--------------EPFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYVEAKVAHELVDFYLDSLDREEIEEYFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPTTGTSP 1170
MSDEE WEPL VDYLMLGIV TFQA ALGVC+HL WR WPPYVTKNVDIVIIMTFAGFAWT A A+ G + RS+ D LA C LE T +F + Q+ LLSS L+P L+A+L P YVFDET NSC T++ + V LGM+A+GF I LW VC RQLR VRKQFNEYEA+KWTLSCL L+ SY + V +ILD HH RR+AIV+ EP K G+ EYL+SFT+GFSEMPSPAQLKA+LA+QLSVEQLR EFR Y+ KVA ELV+FYLDSLDREEI +F RQAATMRIV +YIR+GAP+QVNIS CR+EI+ST+VTAYDIFDRARAEVL VME F+ +FVETEGFRRI +A+ELEQR+ RLL+A GFL P+T P
Sbjct: 1 MSDEELWEPLTMVDYLMLGIVGTFQALALGVCVHLFLWRNWPPYVTKNVDIVIIMTFAGFAWTFANALDVGFVHRSKGDLLAECSLEKLLTWSTLCIHMFAFFIRVYLMWRIMVRHDEDVGSPKGQIFLLSSISLVPPLIALLVPGAYVFDETINSCNTTSTSRTVGLGMNAVGFYTICFLWFVCGRQLRRVRKQFNEYEAIKWTLSCLILLVLSYTVGVNIILDNKHHVLARRLAIVYPVLTTHTLLWGSIGEPLLKKWEGDREYLWSFTRGFSEMPSPAQLKASLAEQLSVEQLRDEFRGYMRTKVAQELVNFYLDSLDREEIHGFFGRQAATMRIVARYIRDGAPEQVNISEACREEIVSTNVTAYDIFDRARAEVLAVMEAEFKAEFVETEGFRRIANASELEQREKRLLRAGGFLPPSTPPGP 428
BLAST of mRNA_E-siliculosus-1a_M_contig97.17640.1 vs. uniprot
Match: D7FTZ6_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ6_ECTSI) HSP 1 Score: 457 bits (1175), Expect = 1.890e-155 Identity = 247/367 (67.30%), Postives = 280/367 (76.29%), Query Frame = 1 Query: 49 MLGIVCTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTFAGFAWTGAAAVGHGLIQRSEDDFLANCYLESTDAVPTCRT----------RLFRV-------------QVLLLSSTGLIPLLLAILDPALYVFDETANSCGTSTGATRVVLGMDALGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTFLLFSYAIVVAVILDGHHCYVRRVAIVW--------------EPFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYVEAKVAHELVDFYLDSLDREEIEEYFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVME 1038
MLG+V TFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMT AGFAWT A+A+ GLI R+E DFLA CY+++T + T R++R+ QV+++SS L PLL A+L P L+ FDET NSC T+T + VVL M+ALGF +I LW VC RQLRWVRKQFNEYEAMKWTLSCLT LLFSYA VVA+IL+ H VRRVAIV+ EP K TG+ YL+SFT+GFSEMPSPAQLKA+LA+QLSVEQLRVEFRRY+E KVA ELVDFYLDSLDREEI+ YF RQAATMRIV+QYIREG+PDQVNISGECR+EILST VTAYDIFDRARAEVL VME
Sbjct: 1 MLGMVGTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTLAGFAWTFASALQSGLIPRNEGDFLAICYIDTTLSWSTLAVHIMSFAVRVYRMWRILIKHDDSMWPAKYQVMVMSSISLGPLLAAVLVPDLHFFDETVNSCNTTTDSRNVVLAMNALGFYLICYLWFVCTRQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIILNNQHVLVRRVAIVYPVLSTYTLLWGSVGEPVVKKFTGDEGYLWSFTKGFSEMPSPAQLKASLAEQLSVEQLRVEFRRYIETKVAQELVDFYLDSLDREEIKGYFGRQAATMRIVEQYIREGSPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVME 367
BLAST of mRNA_E-siliculosus-1a_M_contig97.17640.1 vs. uniprot
Match: A0A6H5K0N5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0N5_9PHAE) HSP 1 Score: 422 bits (1086), Expect = 6.420e-142 Identity = 246/375 (65.60%), Postives = 278/375 (74.13%), Query Frame = 1 Query: 301 RVQVLLLSSTGLIPLLLAILDPALYVFDETANSCGTSTGATRVVLGMDALGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTFLLFSYAIVVAVILDGHHCYVRRVAIVW--------------EPFKMKLTGNAEYLYSFTQGFSEMPSPAQ-----------------LKANLAQQLSVEQLRVEFRRYVEAKVAHELVDFYLDSLDREEIEEYFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPTTGTSPIDTEVP-SPSSPDG-VLGPFRRLSLVGRMLFSSSLGPARSSLS-SAAPQDAGTG 1323
+ QVLL+SS L PLL AIL P L+ FDET NSC T+T + VVL M+ALGF +I LW VCARQLRWVRKQFNEYEAMKWTLSCLT LLFSYA VVA+IL+ H YVRRVAIV+ EP K KL G+ EYL SFT+GFSEMPSPAQ LKA+LA+QLSV+QLRVEFRRYVE VA ELVDFYLDSLDREEI+ YFARQAATMRIV+QYIREG PDQVNISGECR+EILST VTAYDIFDRARAEVL VMETNFQ DFVETEGFRRIVDA+ELEQR++RLL+AEG L+P+ T+P+ P S SP G ++ R L LVGR+ SSS ++S S P AG+G
Sbjct: 16 KYQVLLMSSISLGPLLAAILVPDLHFFDETVNSCNTTTDSRNVVLAMNALGFYVICYLWFVCARQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIILNNRHVYVRRVAIVYPVLTTYTLLWGSIGEPIKRKLGGDTEYLNSFTKGFSEMPSPAQVRKLPPAARDSSNDLVLLKASLAEQLSVQQLRVEFRRYVETMVAQELVDFYLDSLDREEIKGYFARQAATMRIVEQYIREGGPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMETNFQRDFVETEGFRRIVDASELEQREMRLLRAEGVLVPSASTTPVRLAAPRSIFSPRGRLVDSLRCLPLVGRLFSSSSPSAVAHAVSRSTTPGGAGSG 390
BLAST of mRNA_E-siliculosus-1a_M_contig97.17640.1 vs. uniprot
Match: A0A6H5KAT5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT5_9PHAE) HSP 1 Score: 407 bits (1045), Expect = 2.020e-128 Identity = 232/427 (54.33%), Postives = 291/427 (68.15%), Query Frame = 1 Query: 1 MSDEEPWEPLAFVDYLMLGIVCTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTFAGFAWTGAAAVGHGLIQRSEDDFLANCYLE-----STDAVPTCRT-----RLFRV-------------QVLLLSSTGLIPLLLAILDPALYVFDETANSCGTSTGATRVVLGMDALGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTFLLFSYAIVVAVILDGHHCYVRRVAI----------VW----EPFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYVEAKVAHELVDFYLDSLDREEIEEYFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPTTGTSP 1170
M+++E WEPL+ D+ +LG V TFQ AL VC HL+RWRKWPPYVTKNVD+VII AA + R D LA C E ST V T R++R+ Q+L +SS LIP++ P FDE AN+C T+T +T VVLGMDALGF I LW VCARQL+WVRKQFNEYE MK TL +T L SY ++V +L + RRV++ +W EPF MK+ G+ EYL+S+T+GF+++PSPAQLKA+LA+QLSV+QLR EFRRY++ KVA EL+DFYLDSLDREE+ ++F RQAATMRIVDQYI+EGA DQVN+SG CR++IL+T VTA+DIFD ARAEVL VMETNF+ DFV TEGFRRI++A++ EQR++RLL+A G LLP SP
Sbjct: 1 MAEDEVWEPLSTPDFWVLGFVATFQTVALLVCAHLLRWRKWPPYVTKNVDVVII---------SAARLPTRQPGRP-GDILAACDFERFLSWSTLCVHTVAFFIRVYRMWRILIKHDDQMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEVANTCSTTTFSTIVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYETMKRTLLYMTITLASYGVIVVYLLADNLVLGRRVSVFYPLLTTYILLWGSIREPFMMKILGDDEYLWSYTKGFAQLPSPAQLKASLAEQLSVDQLRDEFRRYIKTKVAQELIDFYLDSLDREEVADFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGMLLPLGTPSP 417
BLAST of mRNA_E-siliculosus-1a_M_contig97.17640.1 vs. uniprot
Match: D7FU00_ECTSI (Regulator of G-protein signaling 13 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU00_ECTSI) HSP 1 Score: 330 bits (845), Expect = 1.010e-106 Identity = 185/318 (58.18%), Postives = 221/318 (69.50%), Query Frame = 1 Query: 301 RVQVLLLSSTGLIPLLLAILDPALYVFDETANSCGTSTGATRVVLGMDALGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTFLLFSYAIVVAVILDG-HHCYVRRVAIVWE---------------------------PFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYVEAKVAHELVDFYLDSLDREEIEEYFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPTTGTSP 1170
R Q++LLSS L+PLL+ +L P YVFDE N C T++ + VVL M+A G +I LW VC RQLRWVRKQFNEY+ M TL C+T + SYA+VV V LD H RR+AIVW P K G+ EYL+SFT+GFSE+PSPAQLKA+LA+QLSVEQLR+EFR Y++ KVA ELVDFYL+SLDREEI +F RQA TMRIV +YIREGAP+QVNISG CR++ILST VTAYDIFDRARAEVL +ME +F+ FVETEGFRRI A+ LE R+ RLLQA G L T +P
Sbjct: 11 RYQIMLLSSPCLVPLLVTLLVPGAYVFDEAVNLCNTTSTSRTVVLAMNAFGCCIICFLWFVCVRQLRWVRKQFNEYKEMTRTLLCVTLISVSYALVVVVALDNSHQVLARRLAIVWRGKSSGEIAGGDLHLVSLYLGQERLAERPLVKKWEGDEEYLWSFTKGFSELPSPAQLKASLAEQLSVEQLRIEFRGYMQTKVARELVDFYLESLDREEIHGFFGRQAVTMRIVARYIREGAPEQVNISGACREDILSTDVTAYDIFDRARAEVLALMEGDFKAGFVETEGFRRIAVASYLEDRENRLLQAGGLLPADTLPAP 328
BLAST of mRNA_E-siliculosus-1a_M_contig97.17640.1 vs. uniprot
Match: D7FIS3_ECTSI (Similar to retinally abundant regulator of G-protein signaling hRGS-r n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS3_ECTSI) HSP 1 Score: 307 bits (787), Expect = 3.890e-96 Identity = 168/260 (64.62%), Postives = 202/260 (77.69%), Query Frame = 1 Query: 433 LGMDALGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTFLLFSYAIVVAVILDGHHCYVRRVAIVW--------------EPFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYVEAKVAHELVDFYLDSLDREEIEEYFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPTTGTSP 1170
LGM+ALG I LW VC R+L+ VRKQFNEY+ MK TL LT L SYA+VV V+L G H VRRVAI++ EPF K+ G+ EYL+S+T+GFSE+PSPAQLKA+LA+QLSVEQLR EFR+Y++ KVA EL+DFYLDSLDREE+ +F RQAATMRIV++YIRE APDQVNIS ECR++IL+T VTAYDIFD ARAEVL VMETNFQ +FV TEGFRRI DA+E+E R+IRLL+A G +LP+ SP
Sbjct: 5 LGMNALGMYGICYLWFVCIRRLKSVRKQFNEYQTMKRTLLYLTLALLSYALVVVVLLAGQHVTVRRVAILYPVITTYILLWGSIREPFMKKILGDDEYLWSYTKGFSELPSPAQLKASLAEQLSVEQLRDEFRQYIKTKVAQELIDFYLDSLDREEVMGFFERQAATMRIVERYIREDAPDQVNISEECREKILATDVTAYDIFDEARAEVLVVMETNFQREFVTTEGFRRIADASEVEHREIRLLRAGG-MLPSASPSP 263
BLAST of mRNA_E-siliculosus-1a_M_contig97.17640.1 vs. uniprot
Match: D7FU07_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU07_ECTSI) HSP 1 Score: 271 bits (693), Expect = 1.830e-85 Identity = 151/214 (70.56%), Postives = 174/214 (81.31%), Query Frame = 1 Query: 640 VWEPFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYVEAKVAHELVDFYLDSLDREEIEEYFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLL----PTTGTSPIDTEVPSPSSPDGVLGPFRRLSLV-GRMLFSSS 1266
+ EP K KL G+ EYL SFT+GFSEMPSPAQLKA+LA+QLSVEQLR EFR+Y+E KVA EL+DFY++SLDREEI+EYF RQAATMRIVDQYIREGA +QVNISG CR+EILST VTAYDIFD ARAEVL +METNFQ DFVETEGFRRI DA+ LEQ++IRLL+ EGFL+ PT + P + V P S G+L F R SLV GR+L SSS
Sbjct: 6 IGEPIKRKLAGDTEYLLSFTKGFSEMPSPAQLKASLAEQLSVEQLRDEFRKYIEMKVAQELMDFYIESLDREEIKEYFPRQAATMRIVDQYIREGAAEQVNISGRCREEILSTDVTAYDIFDHARAEVLALMETNFQQDFVETEGFRRIADASALEQQEIRLLRKEGFLVADASPTLNSPPPASSVTPPQS--GLLNKFTRFSLVVGRILPSSS 217 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig97.17640.1 >prot_E-siliculosus-1a_M_contig97.17640.1 ID=prot_E-siliculosus-1a_M_contig97.17640.1|Name=mRNA_E-siliculosus-1a_M_contig97.17640.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=493bp MSDEEPWEPLAFVDYLMLGIVCTFQAFALGVCIHLIRWRKWPPYVTKNVDback to top mRNA from alignment at E-siliculosus-1a_M_contig97:96083..103576+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig97.17640.1 ID=mRNA_E-siliculosus-1a_M_contig97.17640.1|Name=mRNA_E-siliculosus-1a_M_contig97.17640.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7494bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:96083..103576+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:96083..103576+ >mRNA_E-siliculosus-1a_M_contig97.17640.1 ID=mRNA_E-siliculosus-1a_M_contig97.17640.1|Name=mRNA_E-siliculosus-1a_M_contig97.17640.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2958bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:96083..103576+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |