Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17615.1 vs. uniprot
Match:
A0A6H5JZY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY3_9PHAE)
HSP 1 Score: 145 bits (365), Expect = 4.510e-38
Identity = 76/112 (67.86%), Postives = 83/112 (74.11%), Query Frame = 1
Query: 454 GSEVNASDCQGHTALHGATAIDGPVQDNGDAVRVLLGAGADVDAEATGDGCYTPLHVAVDRRIASIGTTRAVLQGGANVNARDEYNQTPLHAACSWSSVAAVELLLRWGADE 789
GSEVN SD QGHTALH AT I+GP G D +ATGD CYTPLHVAVDRRIASIGTTRAVL+ GANVNAR++ + TPLH ACSWSS+A VELLL WGADE
Sbjct: 130 GSEVNGSDYQGHTALHNATVIEGP--------------GPGQDDQATGDRCYTPLHVAVDRRIASIGTTRAVLERGANVNARNDNDLTPLHVACSWSSLAVVELLLLWGADE 227
BLAST of mRNA_E-siliculosus-1a_M_contig96.17615.1 vs. uniprot
Match:
A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE)
HSP 1 Score: 141 bits (356), Expect = 2.620e-37
Identity = 77/113 (68.14%), Postives = 88/113 (77.88%), Query Frame = 1
Query: 457 SEVNASDCQGHTALHGATA-IDGPVQDNGDAVRVLLGAGADVDAEATGDG-CYTPLHVAVDRRIASIGTTRAVLQGGANVNARDEYNQTPLHAACSWSSVAAVELLLRWGADE 789
SEV+A+D G+TALH I+ PV DNGD VRVLL AGADVDA+ TGDG C TPLH AV+RRIA IG RA+L+GGANVNARD ++QTPLH AC+ SSV VE LL WGADE
Sbjct: 10 SEVHATDDGGYTALHCCVCDINEPVLDNGDTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADE 122
BLAST of mRNA_E-siliculosus-1a_M_contig96.17615.1 vs. uniprot
Match:
D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI)
HSP 1 Score: 136 bits (343), Expect = 3.360e-35
Identity = 67/111 (60.36%), Postives = 85/111 (76.58%), Query Frame = 1
Query: 457 SEVNASDCQGHTALHGATAIDGPVQDNGDAVRVLLGAGADVDAEATGDGCYTPLHVAVDRRIASIGTTRAVLQGGANVNARDEYNQTPLHAACSWSSVAAVELLLRWGADE 789
S+++ +D +G ALH A +DGPV+DNGDAVRVLLGAGADV+ D C+TPLH+AV+ R S GT RA+L+GG+N++AR +QTPLH AC +SV VELLLRWGADE
Sbjct: 108 SQLDDTDGEGWAALHYAAVVDGPVRDNGDAVRVLLGAGADVNETNNNDSCFTPLHIAVNGRKVSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADE 218
BLAST of mRNA_E-siliculosus-1a_M_contig96.17615.1 vs. uniprot
Match:
A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE)
HSP 1 Score: 139 bits (351), Expect = 8.570e-35
Identity = 74/110 (67.27%), Postives = 87/110 (79.09%), Query Frame = 1
Query: 460 EVNASDCQGHTALHGATAIDGPVQDNGDAVRVLLGAGADVDAEATGDGCYTPLHVAVDRRIASIGTTRAVLQGGANVNARDEYNQTPLHAACSWSSVAAVELLLRWGADE 789
EV+A+D G ALH A +IDGPV+DNGDAVRVLL AGADV A+ T D C T L++AV+RRIAS GT RA+L+GGAN+NAR +QTPLH ACS SS VELLLRWGAD+
Sbjct: 232 EVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADD 341
BLAST of mRNA_E-siliculosus-1a_M_contig96.17615.1 vs. uniprot
Match:
A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE)
HSP 1 Score: 134 bits (336), Expect = 2.590e-34
Identity = 70/111 (63.06%), Postives = 86/111 (77.48%), Query Frame = 1
Query: 457 SEVNASDCQGHTALHGATAIDGPVQDNGDAVRVLLGAGADVDAEATGDGCYTPLHVAVDRRIASIGTTRAVLQGGANVNARDEYNQTPLHAACSWSSVAAVELLLRWGADE 789
S+VNA++ G ALH A ++ GPV D GDAVRVLLGAG DV+ T D C+TPLHVAVD RIAS GT RA+L+G A+V++R ++QTPLH AC +SV+ VELLLRWGADE
Sbjct: 33 SDVNATNDLGLAALHYAASVVGPVHDKGDAVRVLLGAGVDVNVNTTTDSCFTPLHVAVDGRIASDGTIRALLEG-ADVDSRARHDQTPLHIACKHASVSGVELLLRWGADE 142
BLAST of mRNA_E-siliculosus-1a_M_contig96.17615.1 vs. uniprot
Match:
A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE)
HSP 1 Score: 127 bits (320), Expect = 1.020e-29
Identity = 66/99 (66.67%), Postives = 79/99 (79.80%), Query Frame = 1
Query: 493 ALHGATAIDGPVQDNGDAVRVLLGAGADVDAEATGDGCYTPLHVAVDRRIASIGTTRAVLQGGANVNARDEYNQTPLHAACSWSSVAAVELLLRWGADE 789
ALH A +IDGPV DNGDAVRVLL AGA+++A+ T D C T L++AV+RR+AS GT RA+L+G AN+NAR +QTPLH ACS SS VELLLRWGADE
Sbjct: 726 ALHYAASIDGPVHDNGDAVRVLLRAGANINAKGTKDPCDTSLYLAVNRRMASDGTIRALLEGRANINARTGGDQTPLHVACSRSSAVGVELLLRWGADE 824
BLAST of mRNA_E-siliculosus-1a_M_contig96.17615.1 vs. uniprot
Match:
D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI)
HSP 1 Score: 126 bits (316), Expect = 1.490e-29
Identity = 70/112 (62.50%), Postives = 84/112 (75.00%), Query Frame = 1
Query: 457 SEVNASDCQGHTALHGATAIDGPVQDNGDAVRVLLGAGADVDAEATGDGCY-TPLHVAVDRRIASIGTTRAVLQGGANVNARDEYNQTPLHAACSWSSVAAVELLLRWGADE 789
S VNA+D G+TALH A I+ +D GDAVRVLL AGADV A+ T D PLH+AV R+ S GT RA+L+GGA+VN RD ++TPLH AC++SSVAAVELLLRWGADE
Sbjct: 268 SLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADE 379
BLAST of mRNA_E-siliculosus-1a_M_contig96.17615.1 vs. uniprot
Match:
D8LQL7_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL7_ECTSI)
HSP 1 Score: 122 bits (305), Expect = 6.870e-29
Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = 1
Query: 457 SEVNASDCQGHTALHGATAIDGPVQDNGDAVRVLLGAGADVDAEAT-GDGCYTPLHVAVDRRIASIGTTRAVLQGGANVNARDEYNQTPLHAACSWSSVAAVELLLRWGADE 789
SE++A++ G ALH A + DGPV +NGDA+ VLLGAGADV+ +AT C+TPLHVAV AS GT A+L+GG +VNAR ++N TPLH A +SV+ VELLLRWGADE
Sbjct: 208 SELDATNDFGRAALHYAASFDGPVGNNGDAILVLLGAGADVNVKATTAVCCFTPLHVAVSHWKASNGTICALLEGGGHVNARTQHNNTPLHTAYECASVSVVELLLRWGADE 319
BLAST of mRNA_E-siliculosus-1a_M_contig96.17615.1 vs. uniprot
Match:
D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)
HSP 1 Score: 121 bits (303), Expect = 7.370e-28
Identity = 63/111 (56.76%), Postives = 79/111 (71.17%), Query Frame = 1
Query: 457 SEVNASDCQGHTALHGATAIDGPVQDNGDAVRVLLGAGADVDAEATGDGCYTPLHVAVDRRIASIGTTRAVLQGGANVNARDEYNQTPLHAACSWSSVAAVELLLRWGADE 789
SEV+ ++ G ALH + D V+D GDAVRVLLGAGADV+ + T D C TPLH+AV+R + S GT A+L+GGAN+NAR + TPLH AC+ + VELLLRWGADE
Sbjct: 270 SEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADE 380
BLAST of mRNA_E-siliculosus-1a_M_contig96.17615.1 vs. uniprot
Match:
A0A6H5JHD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD6_9PHAE)
HSP 1 Score: 118 bits (296), Expect = 1.510e-27
Identity = 68/111 (61.26%), Postives = 80/111 (72.07%), Query Frame = 1
Query: 460 EVNASDCQGHTA-LHGATAIDGPVQDNGDAVRVLLGAGADVDAEATGDGCYTPLHVAVDRRIASIGTTRAVLQGGANVNARDEYNQTPLHAACSWSSVAAVELLLRWGADE 789
EV A+ G+ A LH A V+DNGDAVR LLGAGADV+ EAT + C+TPLH+A RIAS GT RA+L+GGAN+NA E ++TPLH AC SVA VELLL WGADE
Sbjct: 169 EVAANGGHGNVAALHCAAVFVVAVRDNGDAVRALLGAGADVNVEATNNICFTPLHLAACHRIASDGTIRALLEGGANINACTE-DETPLHEACWHLSVAGVELLLHWGADE 278
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17615.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 25
0 1 Expect = 4.51e-38 / Id = 67.86 Expect = 2.62e-37 / Id = 68.14 Expect = 3.36e-35 / Id = 60.36 Expect = 8.57e-35 / Id = 67.27 Expect = 2.59e-34 / Id = 63.06 Expect = 1.02e-29 / Id = 66.67 Expect = 1.49e-29 / Id = 62.50 Expect = 6.87e-29 / Id = 58.93 Expect = 7.37e-28 / Id = 56.76 Expect = 1.51e-27 / Id = 61.26 Sequence A0A6H5JZY3_9PHAE A0A6H5K6K9_9PHAE D8LQI9_ECTSI A0A6H5L812_9PHAE A0A6H5JXF0_9PHAE A0A6H5L7E1_9PHAE D8LD22_ECTSI D8LQL7_ECTSI D8LQN0_ECTSI A0A6H5JHD6_9PHAE Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 0 Stop 0 Cds size 789 Model size 789 Exons 1 Hectar predicted targeting category other localisation BRITE ko00000,ko04131 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. G EggNOG OGs COG0666@1,KOG4177@2759 EggNOG free text desc. response to abiotic stimulus GOs GO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259 KEGG ko ko:K21440 Seed eggNOG ortholog 2880.D8LQI9 Seed ortholog evalue 4e-30 Seed ortholog score 138.7 Taxonomic scope Eukaryota
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936541.0968993-CDS-E-siliculosus-1a_M_contig96:536061..536850 1622936541.0968993-CDS-E-siliculosus-1a_M_contig96:536061..536850 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig96 536062..536850 + 1696251122.6639936-CDS-E-siliculosus-1a_M_contig96:536061..536850 1696251122.6639936-CDS-E-siliculosus-1a_M_contig96:536061..536850 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig96 536062..536850 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig96.17615.1
>prot_E-siliculosus-1a_M_contig96.17615.1 ID=prot_E-siliculosus-1a_M_contig96.17615.1|Name=mRNA_E-siliculosus-1a_M_contig96.17615.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=263bp
LHVAAARGAEDLCMALMVAGADPNLRDQGGCSPLHLAAEAGHDRVLGMLL back to top mRNA from alignment at E-siliculosus-1a_M_contig96:536062..536850+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig96.17615.1 ID=mRNA_E-siliculosus-1a_M_contig96.17615.1|Name=mRNA_E-siliculosus-1a_M_contig96.17615.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=789bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:536062..536850+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)CTCCACGTTGCGGCAGCGCGGGGTGCTGAAGACTTATGCATGGCGCTCAT
GGTCGCCGGAGCAGACCCGAATCTGCGTGATCAGGGGGGATGCAGCCCGC
TCCACCTCGCTGCCGAAGCTGGGCACGACCGTGTTCTAGGCATGCTTCTT
CTGAAAGGGGCCCAATTAGACGCGAAGACGACTACCCAGGAGACTCCTCT
CCACCTGGCTGCTTCCCAGGGGCATGCGCTGTGCATCTCTGAGCTTTTGT
TGGGCGGTGCAGACAAGGACGTGGACGATGGTAGCGGTAAAACGCCCCTG
TTCAAAGCGGTAGAAAACAACCACCTCCGGGCCGTTGAAATCCTTCTTGC
TGCCGGTGCCACCCGATGCCGTCTCAACTACGAGTGGAGTACTCCGCTCG
AGGAGGCTGCAAACATCGGCCATGCGACCATTATGACTGCCTGCCTTCAA
GCAGGAAGTGAGGTCAATGCCAGCGATTGTCAAGGACACACAGCCCTACA
CGGCGCTACCGCTATTGATGGGCCTGTCCAAGACAACGGCGATGCTGTCC
GTGTGCTGTTGGGAGCCGGTGCCGATGTCGACGCGGAGGCAACCGGCGAC
GGTTGCTACACGCCTCTCCATGTGGCCGTGGATCGTCGGATAGCATCGAT
CGGCACTACCCGCGCGGTGTTGCAGGGAGGGGCCAACGTCAATGCACGCG
ATGAGTACAATCAGACGCCACTGCACGCTGCTTGTTCGTGGTCGAGTGTG
GCGGCTGTGGAGCTCCTTCTGCGTTGGGGAGCAGATGAA back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:536062..536850+
>mRNA_E-siliculosus-1a_M_contig96.17615.1 ID=mRNA_E-siliculosus-1a_M_contig96.17615.1|Name=mRNA_E-siliculosus-1a_M_contig96.17615.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1578bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:536062..536850+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male) back to top