mRNA_E-siliculosus-1a_M_contig96.17613.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig96.17613.1
Unique NamemRNA_E-siliculosus-1a_M_contig96.17613.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17613.1 vs. uniprot
Match: A0A6H5KZ67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ67_9PHAE)

HSP 1 Score: 580 bits (1496), Expect = 6.630e-204
Identity = 292/301 (97.01%), Postives = 294/301 (97.67%), Query Frame = 1 
Query:  118 MPTASMLAETRPPSSRKRPRIRAVQHVSKGAVLLLSLLQLTTARRPGGGGYHYPSVPPQGYDSQDSSFDGGDWGDWRNQPIPGPNPHGMPFSPPIHRRFEQPEPMNELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLAVAELKHLEHHMLQALAKDAYVSVRELNRYMGNFAHRHNEMVPFIDRPYSGPPPFPFQ 1020
            MPTASMLAE RPPSSRKRPR R VQHVSK AVLLLSLLQLTTARRPGGGGYHYPSV PQGYDSQDSSFDGGDWGDWRNQPIPGP PHGMPFSPPIHRRFEQPEPM+ELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPN+CLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLAVAELKHLEHHMLQALAKDAYVSV ELNRYMGNFAHRHNEMVPFIDRPYSGPPPFPFQ
Sbjct:    1 MPTASMLAEFRPPSSRKRPRSRTVQHVSKSAVLLLSLLQLTTARRPGGGGYHYPSVTPQGYDSQDSSFDGGDWGDWRNQPIPGPKPHGMPFSPPIHRRFEQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNVCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLAVAELKHLEHHMLQALAKDAYVSVSELNRYMGNFAHRHNEMVPFIDRPYSGPPPFPFQ 301
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17613.1 vs. uniprot
Match: D8LQ63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ63_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 6.310e-87
Identity = 142/144 (98.61%), Postives = 144/144 (100.00%), Query Frame = 1 
Query:  382 MPFSPPIHRRFEQPEPMNELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDI 813
            MPFSPPIHRRFEQPEPM+ELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFND+
Sbjct:    1 MPFSPPIHRRFEQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDM 144
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17613.1 vs. uniprot
Match: A0A7S2PVE5_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PVE5_9DINO)

HSP 1 Score: 83.2 bits (204), Expect = 5.100e-14
Identity = 64/186 (34.41%), Postives = 93/186 (50.00%), Query Frame = 1 
Query:  391 SPPIHRRFEQPEPMNELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIH--SVTGLAVAELKHLEHHMLQALAKDAYVSVRELNRYMG 942
            SPP+  R E  E  +   S+A  LEE  +  L   +A VL  LA+     LG R  + S+FH+A  P +++ +++ R+A    C + CL+L LVY+DRL     +    V+PL  HRL   S+++A KF         +D+FY   +   V G+ V EL  LE   LQ L     V   E   Y+G
Sbjct:   93 SPPVLPRSEG-EFHDPGASIAAMLEEAGQEGLVSALANVLSHLAS-----LGCRAHRASIFHAAQTPQISITDYLTRIARYYHCSDSCLVLGLVYIDRLVKLQPDF--VVSPLNVHRLLATSIMLAAKF--------HDDVFYSNKYYGKVAGVRVCELNRLEEKFLQMLKWHLCVLPDEYEEYLG 262
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17613.1 vs. uniprot
Match: A0A5A7QWF6_STRAF (Cyclin n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QWF6_STRAF)

HSP 1 Score: 72.8 bits (177), Expect = 7.090e-11
Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 1 
Query:  463 EEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLAVAELKHLEHHMLQALAKDAYVSVRELNRYMGNFAHRHNEMV 972
            EE   A L G+++++LQ++A  N+L  G R +K SVFH  T P++++  +++R+     C   C ++  VY+DR     +   L +     HRL   S++++ KF+ +     +N+ +Y K   V G++  E+  LE   L  L     V+    + Y    +H   EM+
Sbjct:    6 EESRSAKLIGFVSLLLQRVAESNDLRCGARAQKMSVFHGLTRPTISIHSYLQRIFKYANCSTSCYIVAYVYLDRFT--HTHPTLKINSFNVHRLLITSVMLSAKFMDDM---YYNNAYYAK---VGGISTREMNILEVDFLFGLGFHLNVTPSTFHSYC---SHLQKEMM 164
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17613.1 vs. uniprot
Match: A0A1Y1XV07_9FUNG (Cyclin-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XV07_9FUNG)

HSP 1 Score: 72.0 bits (175), Expect = 2.470e-9
Identity = 45/135 (33.33%), Postives = 78/135 (57.78%), Query Frame = 1 
Query:  571 FHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLAVAELKHLEHHMLQALAKDAYVSVRELNRY----MGNFAHRHN 963
            FHS+T+P++++  ++ R+ ++I   N CL++TL+Y+DR+A  +S  HL++   T HRL   S+ +A KF+ ++  S  N ++ +    V GL V EL  LE  +L  L  +  +  RE + Y    M  F  +H+
Sbjct:   32 FHSSTVPAISIESYIRRIQSSIHFTNNCLLITLIYLDRIAQSTS--HLHINSYTIHRLLLTSITVANKFLNDE--SSPNSLYAK----VGGLPVRELNSLELELLFMLDFELNIQSREFHTYTHRLMSLFQRKHH 158
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17613.1 vs. uniprot
Match: A0A7S4PH37_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PH37_9EUKA)

HSP 1 Score: 67.0 bits (162), Expect = 3.850e-9
Identity = 42/132 (31.82%), Postives = 73/132 (55.30%), Query Frame = 1 
Query:  478 ADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLAVAELKHLE 873
            + L  +I  +  +L  +     GE  R+++ FH+   P +++ ++VERV     C   C ++ LVY++R+   SS+   ++ P+T HRLF ASL++A K+  +     FN+ FY +   V G++  EL  LE
Sbjct:    9 SSLEEFIDALTTELGELIAFGAGETSRRETKFHALRAPIISLRQYVERVTTYAPCTVECFVVALVYLNRM---SSQKLGFINPMTIHRLFLASLLLAAKYYDDL---YFNNKFYAR---VGGISCKELNALE 131
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17613.1 vs. uniprot
Match: A0A7S1SBT1_ALECA (Cyclin n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SBT1_ALECA)

HSP 1 Score: 65.9 bits (159), Expect = 5.870e-9
Identity = 46/156 (29.49%), Postives = 82/156 (52.56%), Query Frame = 1 
Query:  478 ADLGGYIAVVLQKLANMNELFLGERG---RKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLAVAELKHLEHHMLQALAKDAYVSVRELNRY 936
            AD G  ++ +   L+       G RG     +++FH+A  P+V V++++ER+   + C   CL++ LVY+DR+A   +E+   ++ LT HRL   ++++A KF   +  + F++  Y K   V G+ +AEL  LE    Q +    +V   +   Y
Sbjct:    5 ADAGQLVSALAVVLSVHCSRAAGGRGCDSMGRTLFHAAREPAVGVSDYLERIRRRLRCSKECLVMALVYLDRIAEADAEVA--ISNLTVHRLLLTAILVASKF---QDDNGFDNARYAK---VGGIGLAELNALERDFCQRVGWRLHVEPEQYGWY 152
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17613.1 vs. uniprot
Match: A0A7S1B268_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1B268_NOCSC)

HSP 1 Score: 63.5 bits (153), Expect = 3.400e-7
Identity = 43/136 (31.62%), Postives = 68/136 (50.00%), Query Frame = 1 
Query:  541 LGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELH--LYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIH--SVTGLAVAELKHLEHHMLQALAKDAYVSVRELNRY 936
            LG R    + FH+  +  V++ E++ R+     C + CL+L LVY+DR+     + H    V+ L  HRL   S+++A+KF          D+F+   H   V GL+V+EL  LE   +Q L    +V   E + Y
Sbjct:  159 LGCRPHAATCFHAVRLSPVSIQEYLHRIVTWFPCSDECLVLGLVYIDRIV----KWHPGFVVSGLNIHRLLVTSIMLAVKF--------SEDVFFSNAHYAKVAGLSVSELNKLEQRFVQLLHWRLHVLPEEFHHY 282
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17613.1 vs. uniprot
Match: A0A7S1PKI7_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1PKI7_ALECA)

HSP 1 Score: 62.8 bits (151), Expect = 5.720e-7
Identity = 40/129 (31.01%), Postives = 63/129 (48.84%), Query Frame = 1 
Query:  556 RKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIH--SVTGLAVAELKHLEHHMLQALAKDAYVSVRELNRY 936
            ++ + FHS+  P +++  +  R+  N  C N CL++ L+Y+DRL   +S +   V+ L+ HRLF  +  +A KF         +D F+   H   V GL+  EL  LE   L  L    +V   E   Y
Sbjct:  176 KELTCFHSSYAPKISMPNYTARILRNFACSNQCLIIALIYIDRLVKSNSTM--VVSELSCHRLFITAATLAAKF--------HDDRFFSNAHYAKVGGLSARELSGLEKRFLHYLNWKLHVQPEEFAVY 294
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17613.1 vs. uniprot
Match: A0A4D9DBM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBM6_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 7.560e-7
Identity = 43/130 (33.08%), Postives = 72/130 (55.38%), Query Frame = 1 
Query:  496 IAVVLQKLANMNELFLGERGRKKSV----FHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLAVAELKHLE 873
            +  VLQKL ++N+      G   S     FH++  PS++VAE++ER+     C + CL+L L+Y+DRL   S+     +T L  HR+   ++++A KF  ++    FN+++Y K   V G+   E+  LE
Sbjct:  421 LGCVLQKLLDVNKRGESAEGDGNSPTITKFHASRPPSISVAEYLERINKYASCSSECLVLALIYIDRLIQQSN---FALTALNVHRVLITAVMLAAKFFDDQ---YFNNLYYAK---VGGVPCKEINALE 541
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5KZ67_9PHAE6.630e-20497.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ63_ECTSI6.310e-8798.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2PVE5_9DINO5.100e-1434.41Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
A0A5A7QWF6_STRAF7.090e-1128.24Cyclin n=1 Tax=Striga asiatica TaxID=4170 RepID=A0... [more]
A0A1Y1XV07_9FUNG2.470e-933.33Cyclin-domain-containing protein n=1 Tax=Basidiobo... [more]
A0A7S4PH37_9EUKA3.850e-931.82Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A7S1SBT1_ALECA5.870e-929.49Cyclin n=1 Tax=Alexandrium catenella TaxID=2925 Re... [more]
A0A7S1B268_NOCSC3.400e-731.62Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7S1PKI7_ALECA5.720e-731.01Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A4D9DBM6_9STRA7.560e-733.08Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig96contigE-siliculosus-1a_M_contig96:527362..531793 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size906
Model size1844
Exons7
Ec32 orthologEc-26_006000.1
Ec32 ortholog descriptionCyclin-like
Hectar predicted targeting categorysignal peptide
BRITEko00000,ko00001
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGsKOG1674@1,KOG1674@2759
EggNOG free text desc.Cyclin-dependent protein kinase
KEGG Pathwayko04111,map04111
KEGG koko:K06657
Seed eggNOG ortholog45157.CMH039CT
Seed ortholog evalue4.8e-11
Seed ortholog score75.5
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936539.9360142-UTR-E-siliculosus-1a_M_contig96:527361..5274781622936539.9360142-UTR-E-siliculosus-1a_M_contig96:527361..527478Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig96 527362..527478 +
1696251122.489383-UTR-E-siliculosus-1a_M_contig96:527361..5274781696251122.489383-UTR-E-siliculosus-1a_M_contig96:527361..527478Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig96 527362..527478 +
1622936540.968996-UTR-E-siliculosus-1a_M_contig96:530972..5317931622936540.968996-UTR-E-siliculosus-1a_M_contig96:530972..531793Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig96 530973..531793 +
1696251122.591615-UTR-E-siliculosus-1a_M_contig96:530972..5317931696251122.591615-UTR-E-siliculosus-1a_M_contig96:530972..531793Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig96 530973..531793 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936539.9504323-CDS-E-siliculosus-1a_M_contig96:527478..5276711622936539.9504323-CDS-E-siliculosus-1a_M_contig96:527478..527671Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 527479..527671 +
1696251122.5122828-CDS-E-siliculosus-1a_M_contig96:527478..5276711696251122.5122828-CDS-E-siliculosus-1a_M_contig96:527478..527671Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 527479..527671 +
1622936540.8669262-CDS-E-siliculosus-1a_M_contig96:528056..5281271622936540.8669262-CDS-E-siliculosus-1a_M_contig96:528056..528127Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 528057..528127 +
1696251122.5284395-CDS-E-siliculosus-1a_M_contig96:528056..5281271696251122.5284395-CDS-E-siliculosus-1a_M_contig96:528056..528127Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 528057..528127 +
1622936540.8871415-CDS-E-siliculosus-1a_M_contig96:528727..5288981622936540.8871415-CDS-E-siliculosus-1a_M_contig96:528727..528898Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 528728..528898 +
1696251122.54091-CDS-E-siliculosus-1a_M_contig96:528727..5288981696251122.54091-CDS-E-siliculosus-1a_M_contig96:528727..528898Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 528728..528898 +
1622936540.902542-CDS-E-siliculosus-1a_M_contig96:529361..5294801622936540.902542-CDS-E-siliculosus-1a_M_contig96:529361..529480Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 529362..529480 +
1696251122.551181-CDS-E-siliculosus-1a_M_contig96:529361..5294801696251122.551181-CDS-E-siliculosus-1a_M_contig96:529361..529480Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 529362..529480 +
1622936540.919136-CDS-E-siliculosus-1a_M_contig96:529981..5301221622936540.919136-CDS-E-siliculosus-1a_M_contig96:529981..530122Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 529982..530122 +
1696251122.5602882-CDS-E-siliculosus-1a_M_contig96:529981..5301221696251122.5602882-CDS-E-siliculosus-1a_M_contig96:529981..530122Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 529982..530122 +
1622936540.9340684-CDS-E-siliculosus-1a_M_contig96:530529..5306051622936540.9340684-CDS-E-siliculosus-1a_M_contig96:530529..530605Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 530530..530605 +
1696251122.5693183-CDS-E-siliculosus-1a_M_contig96:530529..5306051696251122.5693183-CDS-E-siliculosus-1a_M_contig96:530529..530605Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 530530..530605 +
1622936540.9487484-CDS-E-siliculosus-1a_M_contig96:530837..5309721622936540.9487484-CDS-E-siliculosus-1a_M_contig96:530837..530972Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 530838..530972 +
1696251122.5790741-CDS-E-siliculosus-1a_M_contig96:530837..5309721696251122.5790741-CDS-E-siliculosus-1a_M_contig96:530837..530972Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 530838..530972 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig96.17613.1prot_E-siliculosus-1a_M_contig96.17613.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig96 527479..530972 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig96.17613.1

>prot_E-siliculosus-1a_M_contig96.17613.1 ID=prot_E-siliculosus-1a_M_contig96.17613.1|Name=mRNA_E-siliculosus-1a_M_contig96.17613.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=302bp
MPTASMLAETRPPSSRKRPRIRAVQHVSKGAVLLLSLLQLTTARRPGGGG
YHYPSVPPQGYDSQDSSFDGGDWGDWRNQPIPGPNPHGMPFSPPIHRRFE
QPEPMNELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKS
VFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLY
VTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLAVAELKH
LEHHMLQALAKDAYVSVRELNRYMGNFAHRHNEMVPFIDRPYSGPPPFPF
Q*
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mRNA from alignment at E-siliculosus-1a_M_contig96:527362..531793+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig96.17613.1 ID=mRNA_E-siliculosus-1a_M_contig96.17613.1|Name=mRNA_E-siliculosus-1a_M_contig96.17613.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4432bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:527362..531793+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GCGGCCTCTCCTTGTTCCTGTATTTACCCTCTGTCTCGCACGCGCTGAGC
TTCTCTCTAGCTCGTTTGCTGTCGGAATTCCCCAGCCTGAAGTCGGTGCC
TAGGTGGCATACAGAACATGCCGACTGCATCGATGCTCGCCGAAACCCGT
CCGCCGAGCTCGCGGAAAAGACCCCGAATCAGGGCAGTCCAACACGTGTC
CAAAGGTGCGGTGCTCTTGCTCTCCCTTCTTCAGCTCACCACGGCGCGCC
GGCCAGGAGGAGGAGGTTACCATTATCCATCTGTACCTCCACAGGGATAC
GACTCACAAGGTTTGTCTCGCGCGGAAACGAGGGCGGAATTCGGCATCAC
ATGTAGGTCATGTTGCACATTTCATCCGTTGACCGCAACGTACGCATCGT
CCGCATGCAGAACGCTGAATAATGTATTCATGTCTCAATGCGTACATGTG
CTACACAGCAGTGATAAGGTACTTTGCTGTAGGGTGGGTACAGCAGCACG
ACAAAGAAGTGCGCTGGTAGGGGGTCAAGGTCATGAAATAGCTAGGTATT
TACGGTATAGTCTAAATACAGTCGTTTGTCCTATGCGTACAACAGACAGC
CGTATCGTACAAAGTGTGCACAGCAAACTCGATGCCAATATATTTTCCGC
TGTTGACCTTGAGAGACGCTCTCGTCTCTGCTCGCTTGCGGCCAGACTCT
TCTTTCGATGGTGGAGACTGGGGCGACTGGAGAAACCAGCCAATACCCGG
ACCAAATCCACATGGGGTGAGTAACCGCCGAACATCAATTTTGGCAATTT
TCCGCTGGTTGCAGGATGTCGTGTGCTATTGTATATAGTAGCAAAGACTT
GAACACCCCCCCTTTGATACTGCTGTTGTGTGTATTGCAAGACCTTGCGG
CCTACTGGAAGTATTTTTTCTGAGAATACTACAAGTTAAATATCCGAACA
GACTTTATATCAAAGGACCCTACGGAAGCGACACATCGTGAATCGACAGC
CATGCTACAAATGAGGATTTGGGTGGTACATGAAACGTATGCATAGAAGG
CAGACTTCAGGCGTCTCCGCGGGCCCTTGTTGTGTTTCTACGAGCTGTGT
TTCCCATGAAGTTCAGACATAAGGACTTTTCTGGCGGTTTTCTGGGAGGT
GTTTGTCGATGTTTTCCTTTTCCGTACGGCAACAACGAAGAGGACGAAAT
GAGCGTGAAGTTGCGAGCACACATCGCGTGCTTAGCACATACCTACCGAG
AGGTAGCTGGTCTATTTGGGTACAAATACGTATCTTCGTCGTCGAACGTG
GCTTCAGCCGACACCGATCGTCTTGTTCCTGCACTTTTCTCGTCTTGGTG
TCGGCGTTGCCATCAGATGCCGTTCAGCCCGCCGATCCACAGGCGGTTCG
AACAACCAGAGCCGATGAACGAATTGCGTTCTCTCGCCATCTCGTTGGAA
GAGGAGGACCGAGCTGACCTGGGTGGCTACATTGCAGTGGTTCTTCAGAA
GCTGGCTAACATGAACGAACTGTTCTTGGGGGAAAGGGTGCGTTGCGGTG
GCAGACTTCTCGTTTTCCTTGTTTTGCAACCCAGACGCTCTCTACGGGGA
GCAAGTCGTCGGTAAAGTAAGCACCACGACTTCTCGCGCCCAATTGTTCG
AGATCCACGTCATGATATGGCGCCTGATTGGTGGTGCTTTCTTCGTTACC
CACCGGTTGTGATCGAACCTGAAGGCTGTGTCAGGCTTGCTCCCGATCTC
TCGTCCATAAAACCGAACAGACAGGCCGTGCGTGGCGTTGGCTGCTTTTT
GAGGGCACGGCCTCGTAGATCTCGTGGAACCGCCTCGGAATAGCAATGTC
AATGTTGCCCTGTACCTCGTCGGGACCAGCGCGTCGTGCCGATACGAGTA
CGGCGGACCATTTTAGCGTCAAGCAGGCCGTTACCCCTCCGCACGCATGT
CGTCACCGGCACCTGTTTGCTTCCGTGCGTGCTCTGCCCGTCTTCTCCAG
GGACGCAAGAAAAGCGTGTTTCATTCTGCGACGATGCCGTCGGTGGCCGT
GGCGGAGTTCGTGGAGAGAGTCGCCAACAACATCGTTTGCCCGAACCTGT
GCCTCATGCTTACCCTCGTGTGAGTTCAGAAAAGCGGGACGTGTCATGGC
AGTGAAACCGCAGTGGGGCACGCGAACAGCATGAGGAACAGCGACAATAC
TCCAAGTCGCGAACGGATGTGTGACGTAGCAAGCAAGACGATTGGTACCC
AAGTTAGATGGGACCATCTGGCACGGAAAATGGTCACAAACGCGCGTCTC
TCGATATATGTATCGTACTCTGTGTTGACATTCCTCTGCCACCAGTCAAA
AGCCTCGAAAAATTGATCGAAAGTGGCAAGAATGGGGACAATGTCAACGT
GCCATCAACCAGCGAGCTCTGTAGCAGTACTCGTTGTTGTTGTTGTTTTC
CACCAGAAAGCAGCATTCCTTTGGGTGCTTGGACGGCATCATCCCCGCAG
CTGTCTACTGCTCAGGAGGACAGACCACGATACAAGAAATGACTGGGTGT
GGTCTTCGCAGTGCGTAACGAATTGCGACTTTGTTGCCTTGCCGTGTGCA
CTGACGTGATTGAAACCCAGGTACATGGACCGACTGGCCCTTCCCTCCTC
GGAGCTACACCTCTACGTCACCCCGCTTACTGCACATCGGCTGTTCACGG
CTAGCTTGATCATCGCCATCAAGTTTATCGCCGAGAAGCCTCCATCTGTG
TTCAACGACATGTAAGCAACACCCGTAACTCAGCACCTGCCCACGTAATC
CAATTTCGATCTTCTGCGATATCCTCACCCGGTGGTACTGAGAGGATTAA
AGGTACCGTTGCCAGCTGAAATTACGCGATTTACCCGCTCTCGTGCTCCT
TGTCTGATTGTCATGGCGAAACTTAAAGCAGGAACAAATACTGCAGGGTG
CAGCAGCAAATAATTGGTTACCCTTGACCTTCGGCAAGTGGTGCACCAAA
CCACCAAAACCCTGTTTTCCGCCCGAAAGGTCCCCGTCATGTGCGCATGT
GCGATGCCCTATCTTAGTTATCATCTCTCAATTGTTGTAACGGGACTCAC
TGGCTGCTCTTTTTCGTCCTCTGTTGACCCCCGCCTCCCTTAACCCCCTC
TCCCTTCTTCTGCTCCAGCTTTTATGAGAAGATTCACTCTGTGACTGGCT
TGGCGGTCGCGGAGTTGAAGCACTTGGAGCACCACATGTTGCAGGTAGGT
GTGTGTTATGACTCGGTTTGGTAGTCGGTCGTTGACCTTGGCACCCAGCA
CACGAGCCCTACCTCCCCATTTCCGCAAACGTGGGCCGGTGCGAGGCGTA
GGTTCGCAATGCAATGGCTACCCGCCTGTAACCTAAGAGGGGCGACGCAG
ACTCGTTGTCATGGAAATGAAGCTTACAGACCGCCCTCACCGTTAGTCCG
TCCCGCCCACCGTTGCTCGCACGCAGGCCCTTGCCAAGGACGCGTATGTG
TCCGTGAGAGAGCTGAACCGATACATGGGCAACTTTGCGCACAGGCACAA
CGAGATGGTGCCGTTCATCGACCGGCCTTACTCAGGGCCACCTCCATTCC
CCTTCCAGTAGAAGCTGCCTTGGTGGTACCGGGGAAAGAACTGCTGCGCC
TCGACGGAACGCTTGCGGTTGCAAACAGTAGAAGTACCATCATACGGAGG
GAAGTAACGTAGTTTTTTACGTCTTGAGACGCCGGCCCCATGTGGGGTTG
TAGTGTATATCCTGGTGGATGTTCAGTTCCCGTCATGGTAGGGTGGAAGT
TGCCGAGAAATGTGAACGTCTTTTTTCGAAACGAGTTATTCAAGATCGGA
TCGACTATTTTGCCCCAAAAGTCTCATCTTATTCGACGTCGAGAATAATC
CATCGCGGTAGGACAGATGGTAGTATGAATTGATTAAACATATGCAGCGC
GTTGCCCCTACCAAGAGAGCAGTAGTGTAGTCTGATACAGTCAATGAGGT
CCTGCCCGGCGCACCACAGCGCGCCGTGGGAGCTGGAGTCATCATGTGAT
GTTGCTGTAAGGTTCTACATGCGTCGTGTGGTATTTGTTGCTCTTAGATA
ACTATACACTTAATGTACGAAGGCTCGAGCGAAATAGATTGATAACTGTT
TTGCAATTGTGCCACTTGTTAGAATGCTTGGAAACCTAAGGAATCCTTAA
CAGAAGGAATTTCGGCGCCCGGCTGCCGGTTGTTATGCTTCACTTTTGTC
GGTGAAGGTCCCGCCTACGAACGTTCTTCACATTCCGCCCGGGTACGTAG
TGACGCAAGTACTCTTCGATTCGGCCACGCGCATGGCTGAATGTCCTTCG
GGTGTTTTTCTCTTGGGGTTGTGACTTCATCGGCTAAGCTGCTTCTGTAG
AGGCTAGTCGGGGAAAATATTTCTGCGTGTCG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:527362..531793+

>mRNA_E-siliculosus-1a_M_contig96.17613.1 ID=mRNA_E-siliculosus-1a_M_contig96.17613.1|Name=mRNA_E-siliculosus-1a_M_contig96.17613.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1812bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:527362..531793+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCCGACTGCATCGATGCTCGCCGAAACCCGTCCGCCGAGCTCGCGGAA
AAGACCCCGAATCAGGGCAGTCCAACACGTGTCCAAAGGTGCGGTGCTCT
TGCTCTCCCTTCTTCAGCTCACCACGGCGCGCCGGCCAGGAGGAGGAGGT
TACCATTATCCATCTGTACCTCCACAGGGATACGACTCACAAGATGCCGA
CTGCATCGATGCTCGCCGAAACCCGTCCGCCGAGCTCGCGGAAAAGACCC
CGAATCAGGGCAGTCCAACACGTGTCCAAAGGTGCGGTGCTCTTGCTCTC
CCTTCTTCAGCTCACCACGGCGCGCCGGCCAGGAGGAGGAGGTTACCATT
ATCCATCTGTACCTCCACAGGGATACGACTCACAAGACTCTTCTTTCGAT
GGTGGAGACTGGGGCGACTGGAGAAACCAGCCAATACCCGGACCAAATCC
ACATGGGACTCTTCTTTCGATGGTGGAGACTGGGGCGACTGGAGAAACCA
GCCAATACCCGGACCAAATCCACATGGGATGCCGTTCAGCCCGCCGATCC
ACAGGCGGTTCGAACAACCAGAGCCGATGAACGAATTGCGTTCTCTCGCC
ATCTCGTTGGAAGAGGAGGACCGAGCTGACCTGGGTGGCTACATTGCAGT
GGTTCTTCAGAAGCTGGCTAACATGAACGAACTGTTCTTGGGGGAAAGGA
TGCCGTTCAGCCCGCCGATCCACAGGCGGTTCGAACAACCAGAGCCGATG
AACGAATTGCGTTCTCTCGCCATCTCGTTGGAAGAGGAGGACCGAGCTGA
CCTGGGTGGCTACATTGCAGTGGTTCTTCAGAAGCTGGCTAACATGAACG
AACTGTTCTTGGGGGAAAGGGGACGCAAGAAAAGCGTGTTTCATTCTGCG
ACGATGCCGTCGGTGGCCGTGGCGGAGTTCGTGGAGAGAGTCGCCAACAA
CATCGTTTGCCCGAACCTGTGCCTCATGCTTACCCTCGTGGACGCAAGAA
AAGCGTGTTTCATTCTGCGACGATGCCGTCGGTGGCCGTGGCGGAGTTCG
TGGAGAGAGTCGCCAACAACATCGTTTGCCCGAACCTGTGCCTCATGCTT
ACCCTCGTGTACATGGACCGACTGGCCCTTCCCTCCTCGGAGCTACACCT
CTACGTCACCCCGCTTACTGCACATCGGCTGTTCACGGCTAGCTTGATCA
TCGCCATCAAGTTTATCGCCGAGAAGCCTCCATCTGTGTTCAACGACATG
TACATGGACCGACTGGCCCTTCCCTCCTCGGAGCTACACCTCTACGTCAC
CCCGCTTACTGCACATCGGCTGTTCACGGCTAGCTTGATCATCGCCATCA
AGTTTATCGCCGAGAAGCCTCCATCTGTGTTCAACGACATCTTTTATGAG
AAGATTCACTCTGTGACTGGCTTGGCGGTCGCGGAGTTGAAGCACTTGGA
GCACCACATGTTGCAGCTTTTATGAGAAGATTCACTCTGTGACTGGCTTG
GCGGTCGCGGAGTTGAAGCACTTGGAGCACCACATGTTGCAGGCCCTTGC
CAAGGACGCGTATGTGTCCGTGAGAGAGCTGAACCGATACATGGGCAACT
TTGCGCACAGGCACAACGAGATGGTGCCGTTCATCGACCGGCCTTACTCA
GGGCCACCTCCATTCCCCTTCCAGTAGGCCCTTGCCAAGGACGCGTATGT
GTCCGTGAGAGAGCTGAACCGATACATGGGCAACTTTGCGCACAGGCACA
ACGAGATGGTGCCGTTCATCGACCGGCCTTACTCAGGGCCACCTCCATTC
CCCTTCCAGTAG
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