|
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Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17608.1 vs. uniprot
Match: D8LQ68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ68_ECTSI) HSP 1 Score: 1239 bits (3205), Expect = 0.000e+0 Identity = 819/920 (89.02%), Postives = 824/920 (89.57%), Query Frame = 1 Query: 40 MSALDLVEEFRSLDEVEDSDKVEDSAIGKLSGVHNSIAGGADLSGILALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLRASALSFAEDDVXXXAGRKLGGGDGDQLALEAGGESEAWDSEEDDGQGVASPGRAPNSSHGGALVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSPAGLEGGLSSPKRPAEESSDWDGEEAGQSSDDDESGPRRQPVASDCWEELPWSKANAERENHDSSPSPGLSPSPSARPTDSELG-VGGRSSAAAAIGFEEGAIXXXXXXXXXXXXXXXXXXXXXXRRLSTQSDDQAEEPIGVARGDSTPRRTRAHDRSARGTDDETGTQVTFQASGTGAEAGGGDAATIRALRAELSTLREHVLRSEQKREAQLREFGTRLAVQERRSGPERSGSAPSTALREEGEREAVAAIGTAALVVGEAVETGRDKGGCRDTPRGAVVRNPFAGTGGGAATTPRDHFPAFEDALLDPGESEATPGGSGDEEGGVRGQRGEERSKSAINNEAFDFSIDTLSHINNHTDFGTDAPLTPALRSATAATSPKIGRGAAGQARLPWVTGGGASSTQDAAGCRSKRLVXXXXXXXXXXXXXEEAFFSDACATASLKTPVKHMLATAASDLGVAVRRGRRPDTGKATSSAATAPTRRKPPAPSCFKVXXXXXXXXXXXXXXXXRPPRGRESPPLPDPHSPELCMADVFARASAELDGDGGGVEEEDRSCLPIECGAVVSAGAATVAADPPTGERGSVGVDAGCQTSWSFSARDEIRFVSIPAKPPLSTRMADGRSCRRGAEEGVAAAAGTVDLASRPAGRPERAAPGAAVCVPGDVPVADPGPCCTPRQSRLPLCHTPSRRPRRKSDENLAEGTGPKSETSSFFDSPNLSPIPAVARAGPPHSASQSVAVPS 2796
MSALDLVEEFRSLDEVEDSDKVEDSAIGKLSGVHNSI GGADLSGILALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PLRASALSFAEDDV AG KLG GDGDQLALE GGESEAWDSEEDDGQGV SPG APNSSHGGALVG XXXXXXXXXXXXXXXXXXXXXXXXXXXX PAGLEGGLSSPKRPAEESSDWDGEEAG+S GPRRQ ASDC EELPWS N ER N DSSPSPGLSPSPSARPTDSELG XXXXXXXXXXXXXXXXXXXXXX LSTQSDDQAEEPIGVARGDSTPRR+RAHDRSA GTDDE G QVTFQAS TGAEAGG DAATIRALRAELSTLREHVLRSEQKREAQLRE GTRLAVQERRSGPERSGSA STALREEGEREAVAAIGTAALVVGEAVETGRDKGGCRDTPRGAVVRNPFAGTGGGAATTPRDHFPAFEDALLDPGESEATPGGSGDE GGVRGQRGEE SKSAINNEAFDFSIDTLSHINNHTDFGTDAPLTPAL SA AATSPK+GRGAAGQARLPWVTGGG XXXXXXXXXXXXXEEAFFSDACATASLKTPVKHML TAASDLGVAVRRGRRPDTGKA SSAAT PTRRKPPAPSCFKV XXXXXXXXXXXX RPPRGRESP LPDPHSPELCMADVFARASAELDGDGGGVEEEDRSCLPIECGAVVSA AATVAADPP GER SVGVDAGCQTSWSFSARDEIRFVSIPA PPLSTRMADGRSCRRGAEEG AAAAGT LASRPAG+PERAAPGAAVCVPGDVPVADPGPCCTPRQSRLPLCHTPSRRPRRKSDENLAEG PKSETSSFFDSPNLSPIPAVARAG PHSASQ+V VPS
Sbjct: 1 MSALDLVEEFRSLDEVEDSDKVEDSAIGKLSGVHNSI-GGADLSGILALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-PLRASALSFAEDDVAAAAGGKLGSGDGDQLALETGGESEAWDSEEDDGQGVVSPGTAPNSSHGGALVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGLEGGLSSPKRPAEESSDWDGEEAGRSXXXXXXGPRRQLAASDCCEELPWSNVNPERGNDDSSPSPGLSPSPSARPTDSELGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTQSDDQAEEPIGVARGDSTPRRSRAHDRSAHGTDDEAGAQVTFQASETGAEAGGEDAATIRALRAELSTLREHVLRSEQKREAQLRELGTRLAVQERRSGPERSGSATSTALREEGEREAVAAIGTAALVVGEAVETGRDKGGCRDTPRGAVVRNPFAGTGGGAATTPRDHFPAFEDALLDPGESEATPGGSGDEGGGVRGQRGEEGSKSAINNEAFDFSIDTLSHINNHTDFGTDAPLTPALPSAAAATSPKVGRGAAGQARLPWVTGGGXXXXXXXX--XXXXXXXXXXXXXXXXXXXEEAFFSDACATASLKTPVKHMLTTAASDLGVAVRRGRRPDTGKAASSAATVPTRRKPPAPSCFKVEXXXXXXXXXXXXAGGRPPRGRESP-LPDPHSPELCMADVFARASAELDGDGGGVEEEDRSCLPIECGAVVSADAATVAADPPKGERVSVGVDAGCQTSWSFSARDEIRFVSIPANPPLSTRMADGRSCRRGAEEG-AAAAGTAGLASRPAGKPERAAPGAAVCVPGDVPVADPGPCCTPRQSRLPLCHTPSRRPRRKSDENLAEGAAPKSETSSFFDSPNLSPIPAVARAGLPHSASQNVVVPS 914
BLAST of mRNA_E-siliculosus-1a_M_contig96.17608.1 vs. uniprot
Match: A0A6H5L0S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S8_9PHAE) HSP 1 Score: 1205 bits (3117), Expect = 0.000e+0 Identity = 746/889 (83.91%), Postives = 753/889 (84.70%), Query Frame = 1 Query: 145 SIAGGADLSGILALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLRASALSFAEDDVXXXAGRKLGGGDGDQLALEAGGESEAWDSEEDDGQGVASPGRAPNSSHGGALVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSPAGLEGGLSSPKRPAEESSDWDGEEAGQSSDDDESGPRRQPVASDCWEELPWSKANAERENHDSSPSPGLSPSPSARPTDSELGVGGRSSAAAAIGFEEGAIXXXXXXXXXXXXXXXXXXXXXXRRLSTQSDDQAEEPIGVARGDSTPRRTRAHDRSARGTDDETGTQVTFQASGTGAEAGGGDAATIRALRAELSTLREHVLRSEQKREAQLREFGTRLAVQERRSGPERSGSAPSTALREEGEREAVAAIGTAALVVGEAVETGRDKGGCRDTPRGAVVRNPFAGTGGGAATTPRDHFPAFEDALLDPGESEATPGGSGDEEGGVRGQRGEERSKSAINNEAFDFSIDTLSHINNHTDFGTDAPLTPALRSATAATSPKIGRGAAGQARLPWVTGGGASSTQDAAGCRSKRLVXXXXXXXXXXXXXEEAFFSDACATASLKTPVKHMLATAASDLGVAVRRGRRPDTGKATSSAATAPTRRKPPAPSCFKVXXXXXXXXXXXXXXXXRPPRGRESPPLPDPHSPELCMADVFARASAELDGDGGGVEEEDRSCLPIECGAVVSAGAATVAADPPTGERGSVGVDAGCQTSWSFSARDEIRFVSIPAKPPLSTRMADGRSCRRGAEEGVAAAAGTVDLASRPAGRPERAAPGAAVCVPGDVPVADPGPCCTPRQSRLPLCHTPSRRPRRKSDENLAEGTGPKSETSSFFDSPNLSPIPAVARAGPPHSASQSVAVPSGGWRG 2811
S+AGGADLSGILALD XXXXXXXXXXXXXXXXX LRASALSFAEDDV AGR LGGGDGDQLAL+AGGESEAWDSEEDDGQGVASPGRAPNSSHGGAL G ESSPA LEG LSSPKRPAEESSDWDG EAG+SS+DD S PRRQ ASDC EELPWSK NAEREN DSSPSPGLSPSPSARPTDSELGVGGRSSAAA IG XXXXXXXXXXXXXXXXXXXXXX LSTQSDDQAEEPIGVARG ST RRTRAHDRSARGTDDETGTQVTFQASGTGAEAGGGDAATIRALRAELSTLREHVLRSEQKREAQLRE GTRLAVQERRSGPERSGS ST LREEGERE V AIGTAALVVGEAVET RDKGGCRDTP GAVVRNPFAGTGGGAATTPRDHFPAFEDALLDPGESE TPGGSGDEEGGVR QRGEE SKSAINNEAFDFSIDTLSHINNHTDFGTDAPLTPA RSATAA SPKIGRGAAGQARLPWV GG SS QDA G XXXXXXXXXXXXXEEAFFSDACATASLKTPVKHMLATAA DLGVAVRRGRRPDTGKA SSAATAPTRRKP APS FKV RPPRG ESP LPDPHSPELCMADVFARASAELDGDGGGVEEEDRSCLPIECGA+VSAGA TVA DPP GERGSVGVDAGCQTSWSFSARDEIRFVSIPAKPPLSTRMADGRSCRRGAEEGVAA GT LASRPAG+PERAAPGAAVCVPGD DPGPCCTPRQSRLPLCHTPSRRPR KSDE LAEG GPKS TSSFFDSPNLSPIPAVA AG PHSA Q+V VPSGGWRG
Sbjct: 13 SLAGGADLSGILALDDYDNNDDFDVIAXXXXXXXXXXXXXXXXX---LRASALSFAEDDVAAAAGRNLGGGDGDQLALDAGGESEAWDSEEDDGQGVASPGRAPNSSHGGALAGVTGGTGRFSAIGGSRVAREESRKKPSSSSESSPAELEGDLSSPKRPAEESSDWDGGEAGRSSNDDVSDPRRQLAASDCCEELPWSKVNAERENDDSSPSPGLSPSPSARPTDSELGVGGRSSAAAPIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTQSDDQAEEPIGVARGGSTLRRTRAHDRSARGTDDETGTQVTFQASGTGAEAGGGDAATIRALRAELSTLREHVLRSEQKREAQLRELGTRLAVQERRSGPERSGSTTSTTLREEGEREGVTAIGTAALVVGEAVETARDKGGCRDTPTGAVVRNPFAGTGGGAATTPRDHFPAFEDALLDPGESEGTPGGSGDEEGGVRCQRGEEGSKSAINNEAFDFSIDTLSHINNHTDFGTDAPLTPAPRSATAAASPKIGRGAAGQARLPWVKGGETSSAQDA-GXXXXXXXXXXXXXXXXXXXXEEAFFSDACATASLKTPVKHMLATAAPDLGVAVRRGRRPDTGKAASSAATAPTRRKPTAPSRFKVEQQQEGSSRRRSGAGGRPPRGHESP-LPDPHSPELCMADVFARASAELDGDGGGVEEEDRSCLPIECGAIVSAGAVTVA-DPPKGERGSVGVDAGCQTSWSFSARDEIRFVSIPAKPPLSTRMADGRSCRRGAEEGVAAV-GTGGLASRPAGKPERAAPGAAVCVPGD----DPGPCCTPRQSRLPLCHTPSRRPRLKSDEYLAEGAGPKSGTSSFFDSPNLSPIPAVAHAGLPHSACQNVVVPSGGWRG 890
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 2808 |
| Model size | 4474 |
| Exons | 3 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog | Ec-26_005950.1 |
| Ec32 ortholog description | hypothetical protein |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936539.1100981-UTR-E-siliculosus-1a_M_contig96:485847..485886 | 1622936539.1100981-UTR-E-siliculosus-1a_M_contig96:485847..485886 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig96 485848..485886 + |
| 1696251122.0801609-UTR-E-siliculosus-1a_M_contig96:485847..485886 | 1696251122.0801609-UTR-E-siliculosus-1a_M_contig96:485847..485886 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig96 485848..485886 + |
| 1622936539.1693442-UTR-E-siliculosus-1a_M_contig96:490103..491730 | 1622936539.1693442-UTR-E-siliculosus-1a_M_contig96:490103..491730 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig96 490104..491730 + |
| 1696251122.1369114-UTR-E-siliculosus-1a_M_contig96:490103..491730 | 1696251122.1369114-UTR-E-siliculosus-1a_M_contig96:490103..491730 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig96 490104..491730 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936539.125259-CDS-E-siliculosus-1a_M_contig96:485886..485998 | 1622936539.125259-CDS-E-siliculosus-1a_M_contig96:485886..485998 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig96 485887..485998 + |
| 1696251122.0949419-CDS-E-siliculosus-1a_M_contig96:485886..485998 | 1696251122.0949419-CDS-E-siliculosus-1a_M_contig96:485886..485998 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig96 485887..485998 + |
| 1622936539.1369007-CDS-E-siliculosus-1a_M_contig96:487059..489474 | 1622936539.1369007-CDS-E-siliculosus-1a_M_contig96:487059..489474 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig96 487060..489474 + |
| 1696251122.110352-CDS-E-siliculosus-1a_M_contig96:487059..489474 | 1696251122.110352-CDS-E-siliculosus-1a_M_contig96:487059..489474 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig96 487060..489474 + |
| 1622936539.1546273-CDS-E-siliculosus-1a_M_contig96:489822..490103 | 1622936539.1546273-CDS-E-siliculosus-1a_M_contig96:489822..490103 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig96 489823..490103 + |
| 1696251122.1205842-CDS-E-siliculosus-1a_M_contig96:489822..490103 | 1696251122.1205842-CDS-E-siliculosus-1a_M_contig96:489822..490103 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig96 489823..490103 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig96.17608.1 >prot_E-siliculosus-1a_M_contig96.17608.1 ID=prot_E-siliculosus-1a_M_contig96.17608.1|Name=mRNA_E-siliculosus-1a_M_contig96.17608.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=936bp
MSALDLVEEFRSLDEVEDSDKVEDSAIGKLSGVHNSIAGGADLSGILALD
DDDNNDDFDAIAAAAAAAAGKDAASTTAATAPLRASALSFAEDDVAAAAG
RKLGGGDGDQLALEAGGESEAWDSEEDDGQGVASPGRAPNSSHGGALVGG
AGGTGRSSAFGGGRGAHEESRKKPSSSAESSPAGLEGGLSSPKRPAEESS
DWDGEEAGQSSDDDESGPRRQPVASDCWEELPWSKANAERENHDSSPSPG
LSPSPSARPTDSELGVGGRSSAAAAIGFEEGAIVVVAGGTIADEHRRKGL
LPSSRRRLSTQSDDQAEEPIGVARGDSTPRRTRAHDRSARGTDDETGTQV
TFQASGTGAEAGGGDAATIRALRAELSTLREHVLRSEQKREAQLREFGTR
LAVQERRSGPERSGSAPSTALREEGEREAVAAIGTAALVVGEAVETGRDK
GGCRDTPRGAVVRNPFAGTGGGAATTPRDHFPAFEDALLDPGESEATPGG
SGDEEGGVRGQRGEERSKSAINNEAFDFSIDTLSHINNHTDFGTDAPLTP
ALRSATAATSPKIGRGAAGQARLPWVTGGGASSTQDAAGCRSKRLVREEE
EEEEEDAAVEEAFFSDACATASLKTPVKHMLATAASDLGVAVRRGRRPDT
GKATSSAATAPTRRKPPAPSCFKVEQQQESSSRRRSGAGGRPPRGRESPP
LPDPHSPELCMADVFARASAELDGDGGGVEEEDRSCLPIECGAVVSAGAA
TVAADPPTGERGSVGVDAGCQTSWSFSARDEIRFVSIPAKPPLSTRMADG
RSCRRGAEEGVAAAAGTVDLASRPAGRPERAAPGAAVCVPGDVPVADPGP
CCTPRQSRLPLCHTPSRRPRRKSDENLAEGTGPKSETSSFFDSPNLSPIP
AVARAGPPHSASQSVAVPSGGWRGGVGVTGASREL* back to topmRNA from alignment at E-siliculosus-1a_M_contig96:485848..491730+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig96.17608.1 ID=mRNA_E-siliculosus-1a_M_contig96.17608.1|Name=mRNA_E-siliculosus-1a_M_contig96.17608.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5883bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:485848..491730+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTGTCCGGAGAGAGGGGAAGAGGTTGGCCGCCAGACGGAATGTCTGCGCT
GGATCTGGTGGAGGAGTTTCGATCCCTAGATGAGGTGGAGGATAGCGACA
AGGTCGAGGACAGCGCCATCGGCAAGCTCTCGGGGGTGCACAACAGCATA
GGTGAGGCAGAGGCAGCAACCGCGCAAAGACGGAGCCTTCGCGTTCACGC
GGAGACTTCCCCGACGTGAGTTGCGATGAGGATCGCGAGAACTTCGCGAA
GCGTGGTGAACAGCATGACTAACATGCGGTTTCAGGCAGGCAGTTGTAAG
ATAATATGTACAATAGGTGGGTGCGCAGCAGCGATTTTTTTGTGAAAAAT
CCTCAACGGCAAGGATTGAGGAGGATTAGGATTGCTGCCGTGGCTGCTCG
CAGCTCCCGTGGTGGTACAGTGACACAGCTTTGTACAATAGATATGCAGA
CACACATGATCGAAGAAGAGTGCTGCATTCTGATGGATCGCGCCAAGCTT
GTTCAAGACCAGAAGCGAGGATCCAGTGACACCGCCGAAGATGCTCTGTA
TGCGATCTACGTACCTATCTCCTGATCATCATCCCAGCAACAAATGAACT
TGGGCTGGCTCACGGGAGACGCCGGCCCTTGACACGAGGATGGCTTGCCG
CAGTCGGTCATCGCCGTTGGCCGCACTTGATTGCCACTACTAGGCTGCAT
TGTTGTTGCATACAAGCGGAATAGCAGATTCGGCTCGGGCGAGCTGTCTG
TGTTCTTCTGTACGCACAGCACCAGAACACCAAACAAGCTTCTTGACATC
CATGCATACGATATGCGTGTCCTGCTCAGTCAAACCTCACCACCGGTGTC
TCGTTCTTCCGGAAAGGTACTGCAGTGTTGTTGTTGGTGCAGCAGCAAGG
GTTAGCAGGGTTTGTATACAGCAGTGTGTGGGATCCGTATTGGGTGTTGG
CCTATATAAGCCAGCCGCGTCACAGCTTGGTCGCGAGTTCTCTTGCATCG
CATCGGCTATTGCCCCCTTGCGCAGGATGCAGCCGTTCGGTTTGAGTGTC
TCCACCCCTTTTTTTGTCAATACTGCTGTACCCGCCGTGTTCAGCAGTAC
TCCGCGCTGTTTTTCACTCATCTGCCCAGGCCTTGTCCATTCTCTCACCA
CCAACTTTTGCTGCCCATCATGCCCGTCTCTTACCACGTGTTACCAACAA
CCCCCTCACTAGCAGGCGGTGCAGACCTCTCGGGCATCTTGGCCCTCGAC
GATGACGACAACAACGACGACTTCGACGCTATCGCCGCCGCCGCTGCCGC
GGCCGCTGGCAAAGACGCCGCTTCGACCACCGCCGCCACCGCCCCCCTGC
GGGCATCGGCATTGTCCTTCGCCGAAGACGACGTCGCCGCCGCCGCCGGA
CGAAAACTAGGAGGCGGGGACGGCGATCAGCTTGCACTCGAAGCCGGCGG
GGAGAGTGAGGCGTGGGACAGCGAAGAAGATGACGGGCAAGGGGTTGCCT
CGCCGGGAAGGGCACCTAACAGCAGCCATGGTGGTGCTCTTGTTGGCGGC
GCCGGCGGTACGGGAAGGTCCAGTGCCTTCGGCGGTGGTAGGGGCGCACA
CGAAGAGTCGAGGAAGAAGCCGAGCTCTTCTGCCGAAAGCTCTCCGGCGG
GGCTCGAAGGCGGCCTGTCCTCGCCGAAGCGGCCGGCCGAAGAGAGCTCC
GACTGGGACGGGGAAGAGGCGGGGCAGAGCAGCGACGACGACGAGAGCGG
TCCAAGACGGCAGCCGGTGGCTTCGGACTGCTGGGAGGAGCTGCCGTGGT
CGAAGGCCAACGCCGAGAGAGAAAACCACGACAGCAGTCCATCGCCCGGA
CTCTCCCCCTCGCCCTCCGCCAGGCCGACGGATTCTGAGCTGGGCGTCGG
GGGAAGGAGCTCTGCGGCGGCGGCAATTGGTTTCGAAGAAGGGGCTATCG
TTGTAGTAGCTGGGGGCACCATCGCCGACGAACACCGTCGAAAAGGTCTG
TTGCCATCTTCAAGGCGAAGGCTAAGCACTCAATCCGACGACCAAGCCGA
AGAACCCATTGGCGTGGCGCGAGGCGATTCGACGCCGCGGAGAACACGTG
CCCATGACCGATCCGCCCGTGGCACCGACGACGAAACAGGTACGCAAGTA
ACGTTCCAGGCAAGCGGAACGGGGGCAGAGGCGGGGGGGGGAGATGCGGC
CACGATCCGCGCGCTTCGGGCCGAGCTCAGCACCTTGAGGGAGCACGTCC
TGCGATCAGAGCAGAAGAGAGAGGCCCAGCTGCGCGAGTTCGGAACGAGG
CTAGCGGTGCAAGAGAGGCGGAGCGGGCCTGAGCGCTCGGGTTCAGCCCC
GAGCACCGCGCTGCGGGAGGAGGGGGAAAGAGAAGCCGTGGCCGCCATCG
GTACGGCAGCCCTGGTTGTTGGCGAGGCCGTCGAGACTGGTCGGGATAAG
GGCGGTTGCAGAGATACCCCGCGGGGCGCCGTGGTGCGGAACCCGTTCGC
GGGTACCGGGGGGGGTGCGGCGACGACTCCTCGGGATCACTTCCCGGCGT
TCGAAGACGCGCTGCTCGATCCCGGAGAGAGCGAAGCGACTCCGGGCGGC
AGCGGGGACGAGGAGGGAGGGGTTCGAGGCCAGCGTGGGGAGGAGAGGAG
CAAGTCCGCCATCAACAACGAGGCGTTCGACTTCAGCATCGACACCCTCA
GCCACATCAACAACCACACGGACTTCGGCACCGACGCTCCCCTGACCCCG
GCGCTGCGGTCCGCCACCGCGGCGACGTCGCCGAAGATCGGCAGGGGGGC
CGCGGGGCAGGCGAGGCTCCCGTGGGTGACGGGGGGGGGGGCTTCTTCAA
CGCAAGACGCCGCCGGTTGTCGCTCGAAGAGGCTGGTGAGGGAGGAGGAG
GAGGAGGAGGAGGAAGACGCTGCTGTAGAAGAGGCGTTTTTCTCGGACGC
GTGCGCTACCGCCAGCCTCAAGACGCCGGTGAAGCACATGCTGGCCACCG
CCGCCTCGGACCTCGGCGTCGCCGTCCGCAGGGGCAGACGGCCCGACACC
GGGAAGGCAACCTCTTCCGCCGCCACGGCACCGACGAGACGCAAGCCTCC
GGCCCCGTCTTGCTTCAAGGTCGAGCAGCAACAGGAGAGCAGCAGTCGCC
GAAGAAGCGGGGCAGGCGGACGGCCGCCGCGTGGCCGTGAGAGCCCTCCT
CTGCCGGACCCCCACAGCCCGGAGCTTTGCATGGCCGATGTTTTCGCCCG
CGCGTCCGCCGAGCTCGACGGAGATGGTGGCGGGGTGGAGGAAGAAGACC
GGAGCTGCTTGCCGATCGAGTGCGGCGCAGTTGTTTCCGCGGGCGCGGCT
ACGGTAGCAGCAGATCCGCCAACGGGGGAGAGGGGGTCAGTGGGGGTTGA
CGCCGGGTGCCAGACGAGCTGGAGCTTCTCCGCCCGCGATGAGATCCGCT
TCGTCTCGATCCCGGCCAAGCCTCCGCTGTCCACGCGGATGGCGGACGGG
AGGAGCTGCCGAAGAGGGGCGGAGGAAGGCGTGGCGGCGGCGGCGGGGAC
GGTGGACCTCGCAAGTCGCCCCGCGGGGAGGCCGGAGAGGGCGGCGCCGG
GGGCTGCGGTGTGTGTTCCCGGTGATGGTAAGCCGGGTCTCTGCAAGTTG
CGGTCTCCAGCGGTTGCGGTCTTCAGAGTTTACGGTGTAACATGCAAGCC
CTTCGAGCTTGCACCTACCATCTTGTCGTGTTCTTGATTTCACCCTTTCC
CGGCAAGATAATGTACCGCGCAATGTTGTGCCCGGGTATCGTATCTACAC
AGCAGGGAAGTACCGCAACTACAACGTTTTTCTTTTTGTTGTTGTCCCCC
CATGCCGACTGCCGCCAACATGCCATGCCCCACGCAAACCCGCCCTCGAC
CTGTATGGGCACGAGCACAACGCATTCAGGCGCAACTTACCCTCCTTCCC
GCCGTCCGCCCAACTCCGCCGTCAGTACCAGTGGCAGATCCAGGACCGTG
CTGCACACCGCGGCAATCCCGGCTACCCCTGTGCCACACCCCGAGCCGAC
GTCCCCGGAGGAAGAGCGACGAGAATCTAGCTGAAGGAACCGGCCCAAAG
TCCGAAACCTCGTCGTTTTTCGACAGCCCGAACCTTAGCCCGATCCCCGC
GGTCGCCCGCGCAGGGCCACCTCACAGCGCATCCCAGAGCGTGGCCGTCC
CTTCCGGAGGGTGGCGAGGGGGGGTGGGGGTAACGGGGGCGAGCCGCGAG
TTATGAGCGCTCGACGGCGCCAGCAGCAGCAGCAGGGTCACGGGCTTTCC
ACGATCCTCAGCGAGGGCGAGGGGAGCGCGTCGCCGGGTGGCGAGAAGAC
TCGTCAGGGGTTCGGTCGCCAGGCGCACGACGGGCCGGCGGCAGAGAGTC
GAGCGTCAAGCGCTACCGGCGGGGTGGGAGCCGGCGATGGGGCGCGGGGG
TCAGAGTCCTCCTCAAGCCGGAGGGAGTCTCCGTTTCTCGCCGCCGGCGT
GCCGCCGGTTCCAAGGGCGGGGACAGCGGTAGACCGGAGCTCGGGGAGCG
GGCCGCTGTTCATGGACTCCTTCGCGGACGTGACGCGCTCGTCGGTGCTC
CGGGCGTCCAGCACCCTAAACACCATAGCCCCGCTGGACGACACCGGGCC
GCCGTTGTCGTACAGCTCGCGGATGGGCGTTTCCTTCGCGGGGGAGCTTT
TCGCGGACTCGAGACTCCGGGCATCGTCGGGTTCTTACCGAGCCCCTCGG
TACGATGCCTGCGCTACTACCCAAAGGGAGGGCGAGCAAATCCGTGCCGG
GGGAAGTTGCGGCGCTCTGCCGCTGCCCCGTGCGCAGCAGCAACAAGTGT
CTTCGCAGCGGCAGCGGCGGTCGTGGTCGGCTCCTACGCTGTTCTCGGAG
TGGTCGAAGAAGCACGGCGCCGAGGCAGATCGAGTCGTCGCGCCGGGGGG
GCCGCAAAAGGAAAACTCGCTTGGGCTTGGGGGAGTACCCCCCGATGTGG
TCGGGGCGTGGCTGGCGTTGGCGATCGAGGGAATCTACTCCCACAATGAT
AGCGACGGAGGCGTAACGGACAAACGAATCGGGAAGAGTGGCGGGAGTCG
GGATCGGCGAGACTGTTCGCTCGGCCGAGACCCTGGCCCTGCGGCGAGGC
CGTCGAACGGCGGAGGTCAAGCCGTACTCGCTCGTGCTTGCAGCCAGGTC
GGCGGCGCCTTCGCCTCTGGGCCGGAGGATTCGCCCCCTCCCCCGCCCCC
TCCCCCCGAGGCACAGCTGGTGAACGAAGAGGACGGCGGCGCAAACGAGG
AAGAAATATTCTACCAGCGCCAGCGCCTGTTGCAGCGGGTGGTGTCCGCT
GCAGCTAGCCACGGCGGGGTAATGCCACCGCTTCTGTCGTCGGTGCGGGG
GCAGGATCATCGAGAGCATGACGAACAGGACGTTGCGCCGGGGGGAGAGT
CGTGGCGGAGGCACTCGGACCCACTGTCGTCGTGGAAGGTGCCAGCGGCG
GGGTCTGGTGCCGTAGACGCGACCGAGACCTCGGCAGCAGCGGGCACGGC
CAGCGGTTGGCCCGACAGCGGCAGTGGCACGTCGGCTGCTTACATGCGGC
GGCACACGTCGGGCTATTGGCGAGATAGGCTCGGCATGACGCACTAGATG
TTGGCGACGGCAGTAACGTGGCGTGGCAAATAGGTTTTCGGTCGGTGTAC
AAATGCCGCAGAGGTGTGTTTGCATTACCGTATCATACGACGTTGTATTT
GGCACGAAGCCCTTGTTTGGTTCACGCGGACCCCATATTTAATCCCGCGC
TAAGATCAACTGCAGTGCAGTGCCGTCCGTGTGGTAACGAGTGCGCAGAA
TGCTTGTGGAAGGGAAAGCTCTCCCGGCGGTGT back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:485848..491730+ >mRNA_E-siliculosus-1a_M_contig96.17608.1 ID=mRNA_E-siliculosus-1a_M_contig96.17608.1|Name=mRNA_E-siliculosus-1a_M_contig96.17608.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=5616bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:485848..491730+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTCTGCGCTGGATCTGGTGGAGGAGTTTCGATCCCTAGATGAGGTGGA
GGATAGCGACAAGGTCGAGGACAGCGCCATCGGCAAGCTCTCGGGGGTGC
ACAACAGCATAGATGTCTGCGCTGGATCTGGTGGAGGAGTTTCGATCCCT
AGATGAGGTGGAGGATAGCGACAAGGTCGAGGACAGCGCCATCGGCAAGC
TCTCGGGGGTGCACAACAGCATAGCAGGCGGTGCAGACCTCTCGGGCATC
TTGGCCCTCGACGATGACGACAACAACGACGACTTCGACGCTATCGCCGC
CGCCGCTGCCGCGGCCGCTGGCAAAGACGCCGCTTCGACCACCGCCGCCA
CCGCCCCCCTGCGGGCATCGGCATTGTCCTTCGCCGAAGACGACGTCGCC
GCCGCCGCCGGACGAAAACTAGGAGGCGGGGACGGCGATCAGCTTGCACT
CGAAGCCGGCGGGGAGAGTGAGGCGTGGGACAGCGAAGAAGATGACGGGC
AAGGGGTTGCCTCGCCGGGAAGGGCACCTAACAGCAGCCATGGTGGTGCT
CTTGTTGGCGGCGCCGGCGGTACGGGAAGGTCCAGTGCCTTCGGCGGTGG
TAGGGGCGCACACGAAGAGTCGAGGAAGAAGCCGAGCTCTTCTGCCGAAA
GCTCTCCGGCGGGGCTCGAAGGCGGCCTGTCCTCGCCGAAGCGGCCGGCC
GAAGAGAGCTCCGACTGGGACGGGGAAGAGGCGGGGCAGAGCAGCGACGA
CGACGAGAGCGGTCCAAGACGGCAGCCGGTGGCTTCGGACTGCTGGGAGG
AGCTGCCGTGGTCGAAGGCCAACGCCGAGAGAGAAAACCACGACAGCAGT
CCATCGCCCGGACTCTCCCCCTCGCCCTCCGCCAGGCCGACGGATTCTGA
GCTGGGCGTCGGGGGAAGGAGCTCTGCGGCGGCGGCAATTGGTTTCGAAG
AAGGGGCTATCGTTGTAGTAGCTGGGGGCACCATCGCCGACGAACACCGT
CGAAAAGGTCTGTTGCCATCTTCAAGGCGAAGGCTAAGCACTCAATCCGA
CGACCAAGCCGAAGAACCCATTGGCGTGGCGCGAGGCGATTCGACGCCGC
GGAGAACACGTGCCCATGACCGATCCGCCCGTGGCACCGACGACGAAACA
GGTACGCAAGTAACGTTCCAGGCAAGCGGAACGGGGGCAGAGGCGGGGGG
GGGAGATGCGGCCACGATCCGCGCGCTTCGGGCCGAGCTCAGCACCTTGA
GGGAGCACGTCCTGCGATCAGAGCAGAAGAGAGAGGCCCAGCTGCGCGAG
TTCGGAACGAGGCTAGCGGTGCAAGAGAGGCGGAGCGGGCCTGAGCGCTC
GGGTTCAGCCCCGAGCACCGCGCTGCGGGAGGAGGGGGAAAGAGAAGCCG
TGGCCGCCATCGGTACGGCAGCCCTGGTTGTTGGCGAGGCCGTCGAGACT
GGTCGGGATAAGGGCGGTTGCAGAGATACCCCGCGGGGCGCCGTGGTGCG
GAACCCGTTCGCGGGTACCGGGGGGGGTGCGGCGACGACTCCTCGGGATC
ACTTCCCGGCGTTCGAAGACGCGCTGCTCGATCCCGGAGAGAGCGAAGCG
ACTCCGGGCGGCAGCGGGGACGAGGAGGGAGGGGTTCGAGGCCAGCGTGG
GGAGGAGAGGAGCAAGTCCGCCATCAACAACGAGGCGTTCGACTTCAGCA
TCGACACCCTCAGCCACATCAACAACCACACGGACTTCGGCACCGACGCT
CCCCTGACCCCGGCGCTGCGGTCCGCCACCGCGGCGACGTCGCCGAAGAT
CGGCAGGGGGGCCGCGGGGCAGGCGAGGCTCCCGTGGGTGACGGGGGGGG
GGGCTTCTTCAACGCAAGACGCCGCCGGTTGTCGCTCGAAGAGGCTGGTG
AGGGAGGAGGAGGAGGAGGAGGAGGAAGACGCTGCTGTAGAAGAGGCGTT
TTTCTCGGACGCGTGCGCTACCGCCAGCCTCAAGACGCCGGTGAAGCACA
TGCTGGCCACCGCCGCCTCGGACCTCGGCGTCGCCGTCCGCAGGGGCAGA
CGGCCCGACACCGGGAAGGCAACCTCTTCCGCCGCCACGGCACCGACGAG
ACGCAAGCCTCCGGCCCCGTCTTGCTTCAAGGTCGAGCAGCAACAGGAGA
GCAGCAGTCGCCGAAGAAGCGGGGCAGGCGGACGGCCGCCGCGTGGCCGT
GAGAGCCCTCCTCTGCCGGACCCCCACAGCCCGGAGCTTTGCATGGCCGA
TGTTTTCGCCCGCGCGTCCGCCGAGCTCGACGGAGATGGTGGCGGGGTGG
AGGAAGAAGACCGGAGCTGCTTGCCGATCGAGTGCGGCGCAGTTGTTTCC
GCGGGCGCGGCTACGGTAGCAGCAGATCCGCCAACGGGGGAGAGGGGGTC
AGTGGGGGTTGACGCCGGGTGCCAGACGAGCTGGAGCTTCTCCGCCCGCG
ATGAGATCCGCTTCGTCTCGATCCCGGCCAAGCCTCCGCTGTCCACGCGG
ATGGCGGACGGGAGGAGCTGCCGAAGAGGGGCGGAGGAAGGCGTGGCGGC
GGCGGCGGGGACGGTGGACCTCGCAAGTCGCCCCGCGGGGAGGCCGGAGA
GGGCGGCGCCGGGGGCTGCGGTGTGTGTTCCCGGTGATGCAGGCGGTGCA
GACCTCTCGGGCATCTTGGCCCTCGACGATGACGACAACAACGACGACTT
CGACGCTATCGCCGCCGCCGCTGCCGCGGCCGCTGGCAAAGACGCCGCTT
CGACCACCGCCGCCACCGCCCCCCTGCGGGCATCGGCATTGTCCTTCGCC
GAAGACGACGTCGCCGCCGCCGCCGGACGAAAACTAGGAGGCGGGGACGG
CGATCAGCTTGCACTCGAAGCCGGCGGGGAGAGTGAGGCGTGGGACAGCG
AAGAAGATGACGGGCAAGGGGTTGCCTCGCCGGGAAGGGCACCTAACAGC
AGCCATGGTGGTGCTCTTGTTGGCGGCGCCGGCGGTACGGGAAGGTCCAG
TGCCTTCGGCGGTGGTAGGGGCGCACACGAAGAGTCGAGGAAGAAGCCGA
GCTCTTCTGCCGAAAGCTCTCCGGCGGGGCTCGAAGGCGGCCTGTCCTCG
CCGAAGCGGCCGGCCGAAGAGAGCTCCGACTGGGACGGGGAAGAGGCGGG
GCAGAGCAGCGACGACGACGAGAGCGGTCCAAGACGGCAGCCGGTGGCTT
CGGACTGCTGGGAGGAGCTGCCGTGGTCGAAGGCCAACGCCGAGAGAGAA
AACCACGACAGCAGTCCATCGCCCGGACTCTCCCCCTCGCCCTCCGCCAG
GCCGACGGATTCTGAGCTGGGCGTCGGGGGAAGGAGCTCTGCGGCGGCGG
CAATTGGTTTCGAAGAAGGGGCTATCGTTGTAGTAGCTGGGGGCACCATC
GCCGACGAACACCGTCGAAAAGGTCTGTTGCCATCTTCAAGGCGAAGGCT
AAGCACTCAATCCGACGACCAAGCCGAAGAACCCATTGGCGTGGCGCGAG
GCGATTCGACGCCGCGGAGAACACGTGCCCATGACCGATCCGCCCGTGGC
ACCGACGACGAAACAGGTACGCAAGTAACGTTCCAGGCAAGCGGAACGGG
GGCAGAGGCGGGGGGGGGAGATGCGGCCACGATCCGCGCGCTTCGGGCCG
AGCTCAGCACCTTGAGGGAGCACGTCCTGCGATCAGAGCAGAAGAGAGAG
GCCCAGCTGCGCGAGTTCGGAACGAGGCTAGCGGTGCAAGAGAGGCGGAG
CGGGCCTGAGCGCTCGGGTTCAGCCCCGAGCACCGCGCTGCGGGAGGAGG
GGGAAAGAGAAGCCGTGGCCGCCATCGGTACGGCAGCCCTGGTTGTTGGC
GAGGCCGTCGAGACTGGTCGGGATAAGGGCGGTTGCAGAGATACCCCGCG
GGGCGCCGTGGTGCGGAACCCGTTCGCGGGTACCGGGGGGGGTGCGGCGA
CGACTCCTCGGGATCACTTCCCGGCGTTCGAAGACGCGCTGCTCGATCCC
GGAGAGAGCGAAGCGACTCCGGGCGGCAGCGGGGACGAGGAGGGAGGGGT
TCGAGGCCAGCGTGGGGAGGAGAGGAGCAAGTCCGCCATCAACAACGAGG
CGTTCGACTTCAGCATCGACACCCTCAGCCACATCAACAACCACACGGAC
TTCGGCACCGACGCTCCCCTGACCCCGGCGCTGCGGTCCGCCACCGCGGC
GACGTCGCCGAAGATCGGCAGGGGGGCCGCGGGGCAGGCGAGGCTCCCGT
GGGTGACGGGGGGGGGGGCTTCTTCAACGCAAGACGCCGCCGGTTGTCGC
TCGAAGAGGCTGGTGAGGGAGGAGGAGGAGGAGGAGGAGGAAGACGCTGC
TGTAGAAGAGGCGTTTTTCTCGGACGCGTGCGCTACCGCCAGCCTCAAGA
CGCCGGTGAAGCACATGCTGGCCACCGCCGCCTCGGACCTCGGCGTCGCC
GTCCGCAGGGGCAGACGGCCCGACACCGGGAAGGCAACCTCTTCCGCCGC
CACGGCACCGACGAGACGCAAGCCTCCGGCCCCGTCTTGCTTCAAGGTCG
AGCAGCAACAGGAGAGCAGCAGTCGCCGAAGAAGCGGGGCAGGCGGACGG
CCGCCGCGTGGCCGTGAGAGCCCTCCTCTGCCGGACCCCCACAGCCCGGA
GCTTTGCATGGCCGATGTTTTCGCCCGCGCGTCCGCCGAGCTCGACGGAG
ATGGTGGCGGGGTGGAGGAAGAAGACCGGAGCTGCTTGCCGATCGAGTGC
GGCGCAGTTGTTTCCGCGGGCGCGGCTACGGTAGCAGCAGATCCGCCAAC
GGGGGAGAGGGGGTCAGTGGGGGTTGACGCCGGGTGCCAGACGAGCTGGA
GCTTCTCCGCCCGCGATGAGATCCGCTTCGTCTCGATCCCGGCCAAGCCT
CCGCTGTCCACGCGGATGGCGGACGGGAGGAGCTGCCGAAGAGGGGCGGA
GGAAGGCGTGGCGGCGGCGGCGGGGACGGTGGACCTCGCAAGTCGCCCCG
CGGGGAGGCCGGAGAGGGCGGCGCCGGGGGCTGCGGTGTGTGTTCCCGGT
GATGTACCAGTGGCAGATCCAGGACCGTGCTGCACACCGCGGCAATCCCG
GCTACCCCTGTGCCACACCCCGAGCCGACGTCCCCGGAGGAAGAGCGACG
AGAATCTAGCTGAAGGAACCGGCCCAAAGTCCGAAACCTCGTCGTTTTTC
GACAGCCCGAACCTTAGCCCGATCCCCGCGGTCGCCCGCGCAGGGCCACC
TCACAGCGCATCCCAGAGCGTGGCCGTCCCTTCCGGAGGGTGGCGAGGGG
GGGTGGGGGTAACGGGGGCGAGCCGCGAGTTATGATACCAGTGGCAGATC
CAGGACCGTGCTGCACACCGCGGCAATCCCGGCTACCCCTGTGCCACACC
CCGAGCCGACGTCCCCGGAGGAAGAGCGACGAGAATCTAGCTGAAGGAAC
CGGCCCAAAGTCCGAAACCTCGTCGTTTTTCGACAGCCCGAACCTTAGCC
CGATCCCCGCGGTCGCCCGCGCAGGGCCACCTCACAGCGCATCCCAGAGC
GTGGCCGTCCCTTCCGGAGGGTGGCGAGGGGGGGTGGGGGTAACGGGGGC
GAGCCGCGAGTTATGA back to top
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