Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17602.1 vs. uniprot
Match:
W4GZ05_9STRA (Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ05_9STRA)
HSP 1 Score: 249 bits (635), Expect = 8.200e-83
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 408
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
BLAST of mRNA_E-siliculosus-1a_M_contig96.17602.1 vs. uniprot
Match:
A0A6V1P6C6_HETAK (Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6C6_HETAK)
HSP 1 Score: 248 bits (632), Expect = 2.870e-82
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 408
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLR+QGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct: 7 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRYQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 142
BLAST of mRNA_E-siliculosus-1a_M_contig96.17602.1 vs. uniprot
Match:
A0A1Z5K8H0_FISSO (Histone H3 n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A1Z5K8H0_FISSO)
HSP 1 Score: 247 bits (631), Expect = 3.340e-82
Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 408
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
BLAST of mRNA_E-siliculosus-1a_M_contig96.17602.1 vs. uniprot
Match:
A0A7S1BJN3_9STRA (Histone H3 n=22 Tax=Eukaryota TaxID=2759 RepID=A0A7S1BJN3_9STRA)
HSP 1 Score: 248 bits (632), Expect = 3.760e-82
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 408
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct: 15 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 150
BLAST of mRNA_E-siliculosus-1a_M_contig96.17602.1 vs. uniprot
Match:
K0S7I6_THAOC (Histone domain-containing protein n=8 Tax=Bacillariophyta TaxID=2836 RepID=K0S7I6_THAOC)
HSP 1 Score: 249 bits (635), Expect = 9.530e-82
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 408
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct: 74 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 209
BLAST of mRNA_E-siliculosus-1a_M_contig96.17602.1 vs. uniprot
Match:
D7G4I9_ECTSI (Similar to histone H3.2 n=2 Tax=PX clade TaxID=569578 RepID=D7G4I9_ECTSI)
HSP 1 Score: 245 bits (626), Expect = 1.930e-81
Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 408
MARTKQTARKSTG +APRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct: 1 MARTKQTARKSTGRQAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
BLAST of mRNA_E-siliculosus-1a_M_contig96.17602.1 vs. uniprot
Match:
A7RJG4_NEMVE (Predicted protein n=6 Tax=Eumetazoa TaxID=6072 RepID=A7RJG4_NEMVE)
HSP 1 Score: 245 bits (625), Expect = 2.740e-81
Identity = 132/136 (97.06%), Postives = 135/136 (99.26%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 408
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRL+REIAQDFK+DLRFQ SAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLIREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of mRNA_E-siliculosus-1a_M_contig96.17602.1 vs. uniprot
Match:
A0A6J0UZS0_9SAUR (Histone H3 n=36 Tax=Eukaryota TaxID=2759 RepID=A0A6J0UZS0_9SAUR)
HSP 1 Score: 244 bits (624), Expect = 3.890e-81
Identity = 132/136 (97.06%), Postives = 135/136 (99.26%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 408
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of mRNA_E-siliculosus-1a_M_contig96.17602.1 vs. uniprot
Match:
UPI000775A9B3 (histone H3-like n=1 Tax=Protobothrops mucrosquamatus TaxID=103944 RepID=UPI000775A9B3)
HSP 1 Score: 245 bits (625), Expect = 4.690e-81
Identity = 133/144 (92.36%), Postives = 138/144 (95.83%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS*VIAAYRL 432
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+ + Y L
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERNRFCSEYEL 144
BLAST of mRNA_E-siliculosus-1a_M_contig96.17602.1 vs. uniprot
Match:
E1ZFV1_CHLVA (Histone H3 n=11 Tax=Eukaryota TaxID=2759 RepID=E1ZFV1_CHLVA)
HSP 1 Score: 244 bits (623), Expect = 5.530e-81
Identity = 132/136 (97.06%), Postives = 135/136 (99.26%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 408
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17602.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 25
0 1 Expect = 8.20e-83 / Id = 99.26 Expect = 2.87e-82 / Id = 98.53 Expect = 3.34e-82 / Id = 98.53 Expect = 3.76e-82 / Id = 98.53 Expect = 9.53e-82 / Id = 99.26 Expect = 1.93e-81 / Id = 98.53 Expect = 2.74e-81 / Id = 97.06 Expect = 3.89e-81 / Id = 97.06 Expect = 4.69e-81 / Id = 92.36 Expect = 5.53e-81 / Id = 97.06 Sequence W4GZ05_9STRA A0A6V1P6C6_HETAK A0A1Z5K8H0_FISSO A0A7S1BJN3_9STRA K0S7I6_THAOC D7G4I9_ECTSI A7RJG4_NEMVE A0A6J0UZS0_9SAUR UPI000775A9B3 E1ZFV1_CHLVA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 411 Model size 487 Exons 1 Hectar predicted targeting category other localisation BRITE ko00000,ko00001,ko03036,ko04147 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. B Ec32 ortholog Ec-26_006380.1 Ec32 ortholog description Histone H3 EggNOG OGs COG2036@1,KOG1745@2759 EggNOG free text desc. protein heterodimerization activity GOs GO:0000785,GO:0000786,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0031490,GO:0031491,GO:0031492,GO:0031497,GO:0032991,GO:0032993,GO:0034622,GO:0034728,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0044815,GO:0044877,GO:0051276,GO:0065003,GO:0065004,GO:0071103,GO:0071824,GO:0071840,GO:0097159,GO:1901363 KEGG Pathway ko05034,ko05202,ko05322,map05034,map05202,map05322 KEGG ko ko:K11253 Seed eggNOG ortholog 2880.D7FWI7 Seed ortholog evalue 6.9e-66 Seed ortholog score 256.5 Taxonomic scope Eukaryota
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936536.952152-CDS-E-siliculosus-1a_M_contig96:442286..442697 1622936536.952152-CDS-E-siliculosus-1a_M_contig96:442286..442697 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig96 442287..442697 + 1696251121.7192-CDS-E-siliculosus-1a_M_contig96:442286..442697 1696251121.7192-CDS-E-siliculosus-1a_M_contig96:442286..442697 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig96 442287..442697 +
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936536.9698703-UTR-E-siliculosus-1a_M_contig96:442697..442773 1622936536.9698703-UTR-E-siliculosus-1a_M_contig96:442697..442773 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig96 442698..442773 + 1696251121.732823-UTR-E-siliculosus-1a_M_contig96:442697..442773 1696251121.732823-UTR-E-siliculosus-1a_M_contig96:442697..442773 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig96 442698..442773 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig96.17602.1
>prot_E-siliculosus-1a_M_contig96.17602.1 ID=prot_E-siliculosus-1a_M_contig96.17602.1|Name=mRNA_E-siliculosus-1a_M_contig96.17602.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=137bp
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALR back to top mRNA from alignment at E-siliculosus-1a_M_contig96:442287..442773+
Legend: CDS polypeptide UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig96.17602.1 ID=mRNA_E-siliculosus-1a_M_contig96.17602.1|Name=mRNA_E-siliculosus-1a_M_contig96.17602.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=487bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:442287..442773+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)ATGGCTCGCACGAAGCAGACCGCCCGTAAGTCCACCGGAGGCAAGGCCCC
CCGCAAGCAGCTGGCCACCAAGGCCGCCCGCAAGTCCGCACCGGCCACCG
GCGGTGTCAAGAAGCCCCACCGCTACAGGCCCGGCACCGTGGCCCTGCGC
GAGATCCGTCGCTACCAGAAGTCCACCGAGCTGCTCATCCGCAAGCTCCC
CTTCCAGCGGCTTGTGCGCGAGATCGCCCAGGACTTCAAGAGCGACCTCC
GCTTCCAGGGATCGGCCGTGCTCGCTCTGCAGGAGGCTGCCGAGGCCTAC
CTTGTGGGTCTGTTCGAAGACACCAACTTGTGCGCGATCCACGCCAAGCG
CGTGACCATCATGCCCAAGGACATCCAGCTGGCCCGCCGCATCCGCGGCG
AGCGCTCTTAG GTCATCGCAGCCTACAGGCTGTACCGCTGGAGGCCACTC
TCTGTCTACCGAAGCGAGTCCTCCGCCAACAACCAAC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:442287..442773+
>mRNA_E-siliculosus-1a_M_contig96.17602.1 ID=mRNA_E-siliculosus-1a_M_contig96.17602.1|Name=mRNA_E-siliculosus-1a_M_contig96.17602.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=822bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:442287..442773+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male) back to top