Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17601.1 vs. uniprot
Match:
D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI)
HSP 1 Score: 144 bits (364), Expect = 1.380e-41
Identity = 73/80 (91.25%), Postives = 77/80 (96.25%), Query Frame = 1
Query: 1 MSSPKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPAPK 240
M+S KPTYN MVFDAIKTLKERNGSSIQAIKKSITATYP LNFTPHQMRSALKKGVE+GKFIK+K+SYKLSAEAKKPAPK
Sbjct: 1 MASTKPTYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80
BLAST of mRNA_E-siliculosus-1a_M_contig96.17601.1 vs. uniprot
Match:
A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE)
HSP 1 Score: 137 bits (346), Expect = 2.290e-37
Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 1
Query: 13 KPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPAP 237
KPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYP LNFTPHQMR ALKKGVE+GKFIK+K+SYKLS EAKKPAP
Sbjct: 98 KPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKKPAP 172
BLAST of mRNA_E-siliculosus-1a_M_contig96.17601.1 vs. uniprot
Match:
D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI)
HSP 1 Score: 132 bits (331), Expect = 4.160e-36
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 1
Query: 31 MVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPAPK 240
MVFDAIK+LKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKP PK
Sbjct: 1 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPVPK 70
BLAST of mRNA_E-siliculosus-1a_M_contig96.17601.1 vs. uniprot
Match:
A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE)
HSP 1 Score: 129 bits (324), Expect = 2.650e-35
Identity = 65/70 (92.86%), Postives = 69/70 (98.57%), Query Frame = 1
Query: 31 MVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPAPK 240
MVFDAIKTLKERNGSSIQAIKKSITATYP LNFTPHQMRSALKKGVE+GKF+K+K+SYKLSAEAKKPAPK
Sbjct: 1 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 70
BLAST of mRNA_E-siliculosus-1a_M_contig96.17601.1 vs. uniprot
Match:
D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI)
HSP 1 Score: 124 bits (312), Expect = 1.940e-33
Identity = 62/77 (80.52%), Postives = 69/77 (89.61%), Query Frame = 1
Query: 4 SSPKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPA 234
++ KPTY+VMVFDAIK LKER GSS+ A+KK I ATYP+LNFTPHQMRSALKKG E+GKFIKVKSSYKLS EAKKPA
Sbjct: 3 TTAKPTYSVMVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 79
BLAST of mRNA_E-siliculosus-1a_M_contig96.17601.1 vs. uniprot
Match:
A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE)
HSP 1 Score: 113 bits (282), Expect = 2.550e-29
Identity = 57/68 (83.82%), Postives = 61/68 (89.71%), Query Frame = 1
Query: 31 MVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPA 234
MVFDAIK LKER GSS+ A+KK I ATYP+LNFTPHQMRSALKKG E+GKFIKVKSSYKLS EAKKPA
Sbjct: 1 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 68
BLAST of mRNA_E-siliculosus-1a_M_contig96.17601.1 vs. uniprot
Match:
A0A6H5K9S6_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S6_9PHAE)
HSP 1 Score: 105 bits (262), Expect = 6.270e-27
Identity = 53/61 (86.89%), Postives = 58/61 (95.08%), Query Frame = 1
Query: 31 MVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLS 213
MVFDAIKTLKERNGSSIQA+KKSITATYPAL+FTPHQMRSALKKGVETGKFIKV+ + L+
Sbjct: 1 MVFDAIKTLKERNGSSIQAMKKSITATYPALHFTPHQMRSALKKGVETGKFIKVRHALPLA 61
BLAST of mRNA_E-siliculosus-1a_M_contig96.17601.1 vs. uniprot
Match:
D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI)
HSP 1 Score: 102 bits (253), Expect = 1.470e-24
Identity = 52/72 (72.22%), Postives = 57/72 (79.17%), Query Frame = 1
Query: 16 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKP 231
PTY+ M AI LKERNGSS+ AIKK I ATYP LNF PHQ+R ALKKG ETG FIKVK+SYK+S EAKKP
Sbjct: 2 PTYSEMAKVAILALKERNGSSVPAIKKHIQATYPTLNFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKKP 73
BLAST of mRNA_E-siliculosus-1a_M_contig96.17601.1 vs. uniprot
Match:
D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI)
HSP 1 Score: 103 bits (258), Expect = 5.540e-24
Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = 1
Query: 16 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPAPK 240
PTY+ M +A+K LKERNGSS+ AIKK ITA+YP+L FT H MRSALKKGVE+GKFIKVK+SYKLSA ++PA K
Sbjct: 2 PTYDEMTIEAVKALKERNGSSLFAIKKHITASYPSLTFTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEPAAK 76
BLAST of mRNA_E-siliculosus-1a_M_contig96.17601.1 vs. uniprot
Match:
A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE)
HSP 1 Score: 98.6 bits (244), Expect = 5.890e-22
Identity = 49/67 (73.13%), Postives = 58/67 (86.57%), Query Frame = 1
Query: 16 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSA 216
PTY+ M +A+K LKERNGSS+ AIKK ITA+YP+L FT H +RSALKKGVE+GKFIKVK+SYKLSA
Sbjct: 2 PTYDEMTVEAVKALKERNGSSLFAIKKHITASYPSLTFTGHFLRSALKKGVESGKFIKVKNSYKLSA 68
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17601.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 25
0 1 Expect = 1.38e-41 / Id = 91.25 Expect = 2.29e-37 / Id = 92.00 Expect = 4.16e-36 / Id = 97.14 Expect = 2.65e-35 / Id = 92.86 Expect = 1.94e-33 / Id = 80.52 Expect = 2.55e-29 / Id = 83.82 Expect = 6.27e-27 / Id = 86.89 Expect = 1.47e-24 / Id = 72.22 Expect = 5.54e-24 / Id = 70.67 Expect = 5.89e-22 / Id = 73.13 Sequence D8LQ80_ECTSI A0A6H5KCU1_9PHAE D8LQ75_ECTSI A0A6H5KST0_9PHAE D7G4I5_ECTSI A0A6H5JHR9_9PHAE A0A6H5K9S6_9PHAE D8LMF1_ECTSI D8LJB8_ECTSI A0A6H5JIM8_9PHAE Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig96.17601.1
>prot_E-siliculosus-1a_M_contig96.17601.1 ID=prot_E-siliculosus-1a_M_contig96.17601.1|Name=mRNA_E-siliculosus-1a_M_contig96.17601.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=163bp
MSSPKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPALNFTPHQMRS back to top mRNA from alignment at E-siliculosus-1a_M_contig96:439565..441980-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig96.17601.1 ID=mRNA_E-siliculosus-1a_M_contig96.17601.1|Name=mRNA_E-siliculosus-1a_M_contig96.17601.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2416bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:439565..441980- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)ATGTCGTCCCCGAAACCAACTTACAATGTG GTGAGCAGGGCAGCAATCGC
GTAGATGTCCCCGGTGATAGGAGAATGCTCTTGACGTGTGTGGTCGGCGG
ATTTACATGTACAAGCAGTAGAGACGACGGTTTTGGTTGTCTATTTAGAG
GACACTTTGTTGAGGACAAGATGCAGGTACAATAGGGTCATCGCATCACA
TTTTGCCGCCTGCTGTGGCCGTGAATACTGTTGGAGCTTCTTCTTTCGAG
GATACACGCAACTTGGGGGGGCGCAAACCCTCTTCTGACCCCCGATCGAT
ACAGCAGCGCTGCCGCAACAGAGCCAACGAGCCAACACGCCGTTTGTTTC
GCGCCCTATCTCGCCGCCCTGCAGATGGTATTCGATGCCATCAAGACTCT
CAAGGAACGGAACGGATCCTCCATCCAGGCCATCAAGAAGAGTATCACCG
CCACCTACCCGGCCCTCAACTTCACGCCGCACCAGATGCGCAGCGCCCTC
AAGAAGGGAGTTGAAACTGGCAAGTTCATCAAG GTGAGACACGCCTTGCC
TCTTGCTCCATTTTTGTGTGCTGCGAGTGACAAACCCGTACACTGCAGTG
TACAGCTAGATGTGTGTCTGTGGCACTTGTTAAAAATGGTGTTTGTACCC
ACGCACACCATGCTGTGTGCTTGTGCGGGATGGACGGGAAGTCAGGTTGC
ACGAAGGTGTCGATGTTGGGAAAGCCGGCATGTTCGAACGAACAAAAGCG
GTTCCTAGGTTTTCAAAGAGCAGTAACCAGAAACGGGTAACCCGGGTGCT
TTATCACCACTTTAGGGTACACTTAGAAATCAACACGCCTGCACCCCCAG
GTAGCCAGCGGCATCTCGGGACCCTCTACTGTACCCACATGGTGGTTACT
GGTGTACCCGGAAAAGGTCGATTTTGTACCCAGAAATGGTCATATTTCCA
GGCGCCCGACGACTCTATAACCCGCGGAAAAAACCGTGTACCGCACATAC
CCGCACGACACACCATGTACCGCACATACTCCATCCACAGTATCCACACA
AACCACCACCAACGCTCGTTGACGGGGCACATTGAGCTGCTAACATTTCG
CACATTAGAGACACACTACTACCAGCATTCCCATGAGGAAGGAGGACCCG
ATCGTCTTTTGTGGGTGTTGCGCCTGCCTCCTGTGTGCCCGTTGGCTAAC
TTCACAAGCCAGTCTAAGTTCACGTATTATCGACTCGTGGGCCCGGGCCC
CTCTTCTAGAGGGGTCGAACTCGCTCGATGTGCGAGTTAGCTCGGCGTCG
TGCTCGTAGGTAACCACAGAGAGACAGGGCACGACCTGCCTCATGCTTGC
CTCATGCTTGCCTCATGCTTCCGAGGCACAGCAGCACAGAGCAGGACGGC
AGGGCACACGGCGGTTGGTTTCGCCGCGATCTACGGAGGTTGTCAGAGAT
TGGTATCCTTCAAGGCAAAGTGCCCGTCAACGAGCGTTGGTGGTTTGTGT
GGGTACTGTGGAGTATGTGCGGTACATGGTGTGTCGTGCGGGTATGTGCG
GTACACGGTTTTTTCCGCGGGTTTTAGAGTCATCGCGCGCCGGGAAATAT
GACCATTTCTGGGTACAAAATCGACCTCTTCCGGGTACACCAGTAACAAA
TATCGGTCACTCCAGAGCGTCCTAATGCCAGCGGCGGTTGTACCCCATGG
AGGTTTATTCAATAATGGGTACGATGCTTTTTCGGCCAATCAGCTGCCTA
CCTGGGAGTGCAAGCGTGTTGATTTCTAAGTGTACCCTAAGGTGGTGATC
AAGTACCCGGGAATACCCGATACTGTCTATTGGTCGTTTTCAAATCGTAG
GTCTCGACATCACGCTCATTCCCAAGGCCTCTTTCTTGCCAATCGCTGCC
AAGGCACTACGCGCCGGCATCTTGTTTCAGGAGAAATGTACTTCGACGTG
GAAATTCGTTAAGATAGGTTTGACCAAAGGGTCACGCCTGTGAGAGCAGA
TCCAACTCCGACCGGTGATATTCTCTTTCTGCCAACCAGTGAGCCAGCCA
GGTTTCAGGTTTTTGTAGTGACCATGTTCCACAACACGGCGTTTATTGCG
TCCGTTTCATCACAAGGTGAAAAGCTCTTACAAGCTGAGCGCCGAGGCGA
AGAAGCCCGCCCCGAAGAAGGTCGTGAAAAAGAAGGTGGTGAAGAAGGTC
GTGAAGAAGAAGGTGCCGAAGAAGAAGGTGGCCAAGAAGCCCGCTGTAAA
GAAGACCACGACGAAGAAGCCCGCCGCCAAGAAGGCCACCACCACCAAGA
AGACCGTCACCAAGAAGAAGCCCACCACCGCCAAGAAGACCGTCACCAAG
AAGAAGCCCACCACCAAGAAGAAGCCCTCCACCCCCAAGAAGAAGGCTGC
CCCCAAGAAGGCCTAG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:439565..441980-
>mRNA_E-siliculosus-1a_M_contig96.17601.1 ID=mRNA_E-siliculosus-1a_M_contig96.17601.1|Name=mRNA_E-siliculosus-1a_M_contig96.17601.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=978bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:439565..441980- (Ectocarpus siliculosus Ec864m_EcPH12_78m male) back to top