prot_E-siliculosus-1a_M_contig96.17599.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig96.17599.1
Unique Nameprot_E-siliculosus-1a_M_contig96.17599.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length123
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17599.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 9.030e-76
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
            MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17599.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 3.130e-74
Identity = 120/121 (99.17%), Postives = 121/121 (100.00%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121
            MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK
Sbjct:   46 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17599.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 8.630e-70
Identity = 111/119 (93.28%), Postives = 118/119 (99.16%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
            MSGKGKGGRGKKST++S+KAGLQFPV R+GR+LKRGKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:    1 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 119
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17599.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 4.470e-69
Identity = 111/119 (93.28%), Postives = 118/119 (99.16%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
            MSGKGKGGRGKKST++S+KAGLQFPV R+GR+LKRGKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:   52 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 170
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17599.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 9.900e-68
Identity = 106/118 (89.83%), Postives = 115/118 (97.46%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
            MSGKGKGGRGKK T+RSAKAGLQFPVGR+GRF+K+GKY+SRVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17599.1 vs. uniprot
Match: A0A6H5KGY1_9PHAE (Integrase catalytic domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGY1_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 7.950e-66
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTV 120
            MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTV
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTV 120
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17599.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 201 bits (511), Expect = 8.610e-65
Identity = 105/122 (86.07%), Postives = 116/122 (95.08%), Query Frame = 0 
Query:    1 MSGKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121
            MSGKGKGGRG KKSTT SAKAGLQFPVGR+GR+L++GKYA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK+ K
Sbjct:    1 MSGKGKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17599.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 199 bits (507), Expect = 3.510e-64
Identity = 104/122 (85.25%), Postives = 116/122 (95.08%), Query Frame = 0 
Query:    1 MSGKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121
            MSGKGKGGRG KKSTT SAKAGLQFPVGR+GR+L++GKYA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKK+ K
Sbjct:    1 MSGKGKGGRGEKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKKSGK 122
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17599.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 199 bits (505), Expect = 8.880e-64
Identity = 105/122 (86.07%), Postives = 114/122 (93.44%), Query Frame = 0 
Query:    1 MSGKGKGGRG---KKSTTRSAKAGLQFPVGRVGRFLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
            M+GKGKGGRG   KKST++S+KAGLQFPV R+GRFLK G+YA RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKKT
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKT 122
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17599.1 vs. uniprot
Match: A0A7S2GRL8_9STRA (Histone H2A n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GRL8_9STRA)

HSP 1 Score: 199 bits (505), Expect = 1.040e-63
Identity = 102/118 (86.44%), Postives = 112/118 (94.92%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
            MSGKGKGGRGKKSTT SAKAGLQFPVGR+GR+LK+GK+A+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI PRHI LAV+NDEELNKLLG VTIA GGVLPNIH+VLLPKK
Sbjct:    1 MSGKGKGGRGKKSTTSSAKAGLQFPVGRIGRYLKQGKFATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIAPRHITLAVKNDEELNKLLGGVTIAGGGVLPNIHSVLLPKK 118
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI9.030e-7699.18Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI3.130e-7499.17Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE8.630e-7093.28Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI4.470e-6993.28Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LLP0_ECTSI9.900e-6889.83Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A6H5KGY1_9PHAE7.950e-6699.17Integrase catalytic domain-containing protein n=7 ... [more]
A0A6U2JFS4_9STRA8.610e-6586.07Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A448ZH28_9STRA3.510e-6485.25Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A836CG77_9STRA8.880e-6486.07Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7S2GRL8_9STRA1.040e-6386.44Histone H2A n=1 Tax=Helicotheca tamesis TaxID=3740... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 12..34
score: 68.99
coord: 56..69
score: 90.54
coord: 98..116
score: 76.04
coord: 70..84
score: 77.52
coord: 41..56
score: 90.36
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..121
e-value: 1.7E-79
score: 280.1
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 90..122
e-value: 1.7E-19
score: 69.2
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 11..87
e-value: 3.7E-15
score: 56.4
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..122
e-value: 8.4E-62
score: 208.8
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..121
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 5..122
NoneNo IPR availablePANTHERPTHR23430:SF251coord: 5..122
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 20..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig96contigE-siliculosus-1a_M_contig96:426621..426989 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig96.17599.1mRNA_E-siliculosus-1a_M_contig96.17599.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig96 426621..426989 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig96.17599.1 ID=prot_E-siliculosus-1a_M_contig96.17599.1|Name=mRNA_E-siliculosus-1a_M_contig96.17599.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=123bp
MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKRGKYASRVGAGAPVYL
AAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVT
IASGGVLPNIHAVLLPKKTVKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032458Histone_H2A_CS
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR002119Histone_H2A