mRNA_E-siliculosus-1a_M_contig96.17581.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig96.17581.1
Unique NamemRNA_E-siliculosus-1a_M_contig96.17581.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17581.1 vs. uniprot
Match: D8LQ94_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ94_ECTSI)

HSP 1 Score: 1886 bits (4885), Expect = 0.000e+0
Identity = 1114/1335 (83.45%), Postives = 1125/1335 (84.27%), Query Frame = 1
Query:  109 MRSVRPDAQPADSAGLGGRGGDSSPESFPAGHQSRLAVPRNWRASMSRRRSEGAAGSGSGINSGITRGGSGRKEQQQSSSHLEKDGEWFGDARGVAGSASEKVLGAAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQSRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGVFAPPSGEYYRLPWYRRPLPSNRRVGVAGGGEATHLKRASSMISAPRAGLRPPPVITSGAGXXXXXXXXXXXXXLNGVATPGGGERTRATEQREEXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPANEVPVCFAATESPTERPPLTTPMRSPTSAFEAVADRAGAAAQQAASN----VVSVNAQADVHATPTANSMAADRDESTREEGGSADRSRSGGTAVAAGTEQPRGTSPEKEHAAESEELEKLRAEVARLKREMASMAAXXXXXXXXXXXXXXXXXXXRRPSQRIETSSPVASFSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWMQXXXXXXXXXXXXXXXXXXXXRTERRYHRDSIGVGFSGKSRPGSVLPAPRKDSSNGGERSRGSSEDVGDEVGLLSPPVNGTKIEGPSPASREKEKTAAVLEGRRRDSGADSINGASGAXXXXXXXXDGADRGARGSESAGSDASVRRGXXXXXXXXXXXXXXXQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATRIGETVTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETVRRRGGVDGNGRVWRWVLAQRTEDQTVRQAVISHGLPRFGRRHIWAAWAAVATPETYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGFILITFADCVLSEREDLKSRSSRNRATSGGSSTCRSNAPADSAAAGDVTEPSDVQPGPANEGGTAVETEGKGGEAEKEAA-VKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCRQGMFESHGLPATVKAVRRYAEGCKTFDDLVRQAPVGLNQVVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMTGEPVYLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLTSPRSPFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRGXXXXXXXXXXDNLPPTSPRFSTPSRQRQLRRAASTSWW 4098
            MR+VR DAQPA+S GLGGRGGDSSPESFP GHQSRLAVPRNWRASMSRRRSEGAAGSGSGINSGITRGGSGRKEQQQSSSHLEKDGEWFGDARGVA SASEKVL AAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQSRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGV APP G+YYRLPWYRRPLPSNRRVGVAGGGEATHLKRA                                                                                                                                                    VADRAGA AQQAAS     VVS NAQA+VHATPTANSMAADRDESTREEGG ADRSRSGGTAVAAGTEQPRGTSPEKEHAAESEELEKLRAEVARLKREMASMAAXXXXXXXXXXXXXXXXXXXRRPSQRIETSSPVASFSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWMQXXXXXXXXXXXXXXXXXXXXRTERRYHRDSIGVGFSG SRPGSVLPAPRKDSSNGGERSRGSSED+GDEVGLLSPPVN  KIEGPSPASREKEKTA VLEGRRRDSGADSINGAS A     XXX       RG             XXXXXXXXXXXXXXXQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATRIGE+VTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETVRRRGGVDGNGRVWRWVLAQRTEDQTVRQAV+SHGLPRFGRRHIWAAWAAVATPETYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGF+LITFADCVLSEREDLKSRSSRNR TSGGSSTC SNAPADSAAAGDVTEPSDVQPGPANEG  AVETEG GG AEKEAA VKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCR+GMFESHGLPATVKAVRRYAEGCKTFD+LVRQAPVGLN+VVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMTGEPVYLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLTSPRSPFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRG          DNLPPTSPRFSTPSRQRQLRRAASTSWW
Sbjct:    1 MRNVRSDAQPANSTGLGGRGGDSSPESFPPGHQSRLAVPRNWRASMSRRRSEGAAGSGSGINSGITRGGSGRKEQQQSSSHLEKDGEWFGDARGVADSASEKVLAAAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQSRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGVVAPPPGDYYRLPWYRRPLPSNRRVGVAGGGEATHLKRA----------------------------------------------------------------------------------------------------------------------------------------------------VADRAGAVAQQAASKATSPVVSGNAQAEVHATPTANSMAADRDESTREEGGFADRSRSGGTAVAAGTEQPRGTSPEKEHAAESEELEKLRAEVARLKREMASMAAXXXXXXXXXXXXXXXXXXXRRPSQRIETSSPVASFSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWMQXXXXXXXXXXXXXXXXXXXXRTERRYHRDSIGVGFSGTSRPGSVLPAPRKDSSNGGERSRGSSEDIGDEVGLLSPPVNSAKIEGPSPASREKEKTAVVLEGRRRDSGADSINGASVAGAGAGXXXXXXXXXXRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATRIGESVTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETVRRRGGVDGNGRVWRWVLAQRTEDQTVRQAVMSHGLPRFGRRHIWAAWAAVATPETYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGFMLITFADCVLSEREDLKSRSSRNRGTSGGSSTCSSNAPADSAAAGDVTEPSDVQPGPANEGSAAVETEGMGGGAEKEAAAVKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCRKGMFESHGLPATVKAVRRYAEGCKTFDELVRQAPVGLNEVVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMTGEPVYLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLTSPRSPFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRGGGGG------DNLPPTSPRFSTPSRQRQLRRAASTSWW 1181          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17581.1 vs. uniprot
Match: A4S0J9_OSTLU (Rab-GAP TBC domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S0J9_OSTLU)

HSP 1 Score: 63.2 bits (152), Expect = 3.510e-6
Identity = 47/133 (35.34%), Postives = 63/133 (47.37%), Query Frame = 1
Query: 2539 RVWRWVLAQ----RTEDQTVRQAVISHGLPRFGRRHIWAAW--------AAVATPETYKKPKQSSDPAKEGSIVNT-IAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGFILI 2898
            R WR  +A     R   + VR    ++G+ R  R  +W AW        A+  T E Y +  + SD A   +  +  I  D+ART   H  F   G  L  L+RVL   A   A   AGY+QGMNYL GF+L+
Sbjct:   41 RRWRAFVANGRDARARGELVRAFARANGVGREARPRLWFAWSGAEAAKRASDTTYEEYLRAAELSDDAAAATTRDAQIEMDLARTFPEHARFAETGDALPALRRVLRATATSAA---AGYVQGMNYLGGFLLL 170          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17581.1 vs. uniprot
Match: A0A7S0EL96_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EL96_9EUKA)

HSP 1 Score: 54.7 bits (130), Expect = 8.500e-5
Identity = 28/111 (25.23%), Postives = 58/111 (52.25%), Query Frame = 1
Query: 3223 RDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCR-QGMFESHGLPATVKAVRRYAEGC 3552
            + + G   +++++E LL +Q P++  HLR ++L +  +T +WF+C++  ++ ++S   R+WDL        P  +  VA+A+      Q + E+  +   V  +R     C
Sbjct:   13 QSMLGHQVDSQVLEQLLEQQLPELSAHLRSLSLSVPFVTTQWFLCLFLNALPSESCF-RVWDLIFCLH---PCTIFQVAIALFGSMEEQSLLEATDIGPAVFVIRSATRSC 119          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17581.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQ94_ECTSI0.000e+083.45Rab-GAP TBC domain-containing protein n=2 Tax=Ecto... [more]
A4S0J9_OSTLU3.510e-635.34Rab-GAP TBC domain-containing protein n=1 Tax=Ostr... [more]
A0A7S0EL96_9EUKA8.500e-525.23Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig96contigE-siliculosus-1a_M_contig96:257587..268646 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size3993
Model size5914
Exons9
Hectar predicted targeting categoryother localisation
BRITEko00000,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelStreptophyta
COG Functional cat.U
EggNOG OGs37HWR@33090,3GEW1@35493,COG5210@1,KOG2058@2759
EggNOG free text desc.TBC1 domain family member
GOsGO:0003674,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006810,GO:0006886,GO:0008047,GO:0008104,GO:0008150,GO:0012505,GO:0015031,GO:0015833,GO:0017016,GO:0017137,GO:0019899,GO:0030054,GO:0030234,GO:0030695,GO:0031267,GO:0031338,GO:0031410,GO:0031982,GO:0032879,GO:0033036,GO:0033043,GO:0034613,GO:0042886,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0045296,GO:0046907,GO:0050789,GO:0050790,GO:0050794,GO:0050839,GO:0051020,GO:0051049,GO:0051128,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0051641,GO:0051649,GO:0060589,GO:0060627,GO:0065007,GO:0065009,GO:0070727,GO:0071702,GO:0071705,GO:0090630,GO:0097708,GO:0098772
KEGG koko:K20165
Seed eggNOG ortholog3218.PP1S154_20V6.1
Seed ortholog evalue3.1e-09
Seed ortholog score71.6
Taxonomic scopeViridiplantae
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936532.8144634-UTR-E-siliculosus-1a_M_contig96:257586..2576661622936532.8144634-UTR-E-siliculosus-1a_M_contig96:257586..257666Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig96 257587..257666 +
1696251120.1439269-UTR-E-siliculosus-1a_M_contig96:257586..2576661696251120.1439269-UTR-E-siliculosus-1a_M_contig96:257586..257666Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig96 257587..257666 +
1622936532.835504-UTR-E-siliculosus-1a_M_contig96:258916..2589441622936532.835504-UTR-E-siliculosus-1a_M_contig96:258916..258944Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig96 258917..258944 +
1696251120.155571-UTR-E-siliculosus-1a_M_contig96:258916..2589441696251120.155571-UTR-E-siliculosus-1a_M_contig96:258916..258944Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig96 258917..258944 +
1622936533.043076-UTR-E-siliculosus-1a_M_contig96:266833..2686461622936533.043076-UTR-E-siliculosus-1a_M_contig96:266833..268646Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig96 266834..268646 +
1696251120.2636013-UTR-E-siliculosus-1a_M_contig96:266833..2686461696251120.2636013-UTR-E-siliculosus-1a_M_contig96:266833..268646Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig96 266834..268646 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936532.8548849-CDS-E-siliculosus-1a_M_contig96:258944..2592711622936532.8548849-CDS-E-siliculosus-1a_M_contig96:258944..259271Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 258945..259271 +
1696251120.1668916-CDS-E-siliculosus-1a_M_contig96:258944..2592711696251120.1668916-CDS-E-siliculosus-1a_M_contig96:258944..259271Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 258945..259271 +
1622936532.8713136-CDS-E-siliculosus-1a_M_contig96:259697..2619341622936532.8713136-CDS-E-siliculosus-1a_M_contig96:259697..261934Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 259698..261934 +
1696251120.1779664-CDS-E-siliculosus-1a_M_contig96:259697..2619341696251120.1779664-CDS-E-siliculosus-1a_M_contig96:259697..261934Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 259698..261934 +
1622936532.8872619-CDS-E-siliculosus-1a_M_contig96:262338..2625311622936532.8872619-CDS-E-siliculosus-1a_M_contig96:262338..262531Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 262339..262531 +
1696251120.1911626-CDS-E-siliculosus-1a_M_contig96:262338..2625311696251120.1911626-CDS-E-siliculosus-1a_M_contig96:262338..262531Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 262339..262531 +
1622936532.9486082-CDS-E-siliculosus-1a_M_contig96:263148..2635291622936532.9486082-CDS-E-siliculosus-1a_M_contig96:263148..263529Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 263149..263529 +
1696251120.2037692-CDS-E-siliculosus-1a_M_contig96:263148..2635291696251120.2037692-CDS-E-siliculosus-1a_M_contig96:263148..263529Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 263149..263529 +
1622936532.9656103-CDS-E-siliculosus-1a_M_contig96:264013..2641111622936532.9656103-CDS-E-siliculosus-1a_M_contig96:264013..264111Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 264014..264111 +
1696251120.2132475-CDS-E-siliculosus-1a_M_contig96:264013..2641111696251120.2132475-CDS-E-siliculosus-1a_M_contig96:264013..264111Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 264014..264111 +
1622936532.9834015-CDS-E-siliculosus-1a_M_contig96:265312..2655681622936532.9834015-CDS-E-siliculosus-1a_M_contig96:265312..265568Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 265313..265568 +
1696251120.2302687-CDS-E-siliculosus-1a_M_contig96:265312..2655681696251120.2302687-CDS-E-siliculosus-1a_M_contig96:265312..265568Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 265313..265568 +
1622936533.00338-CDS-E-siliculosus-1a_M_contig96:266042..2661781622936533.00338-CDS-E-siliculosus-1a_M_contig96:266042..266178Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 266043..266178 +
1696251120.2423737-CDS-E-siliculosus-1a_M_contig96:266042..2661781696251120.2423737-CDS-E-siliculosus-1a_M_contig96:266042..266178Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 266043..266178 +
1622936533.019437-CDS-E-siliculosus-1a_M_contig96:266468..2668331622936533.019437-CDS-E-siliculosus-1a_M_contig96:266468..266833Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 266469..266833 +
1696251120.2523267-CDS-E-siliculosus-1a_M_contig96:266468..2668331696251120.2523267-CDS-E-siliculosus-1a_M_contig96:266468..266833Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 266469..266833 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig96.17581.1prot_E-siliculosus-1a_M_contig96.17581.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig96 258945..266833 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig96.17581.1

>prot_E-siliculosus-1a_M_contig96.17581.1 ID=prot_E-siliculosus-1a_M_contig96.17581.1|Name=mRNA_E-siliculosus-1a_M_contig96.17581.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1331bp
MRSVRPDAQPADSAGLGGRGGDSSPESFPAGHQSRLAVPRNWRASMSRRR
SEGAAGSGSGINSGITRGGSGRKEQQQSSSHLEKDGEWFGDARGVAGSAS
EKVLGAAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQ
SRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGVFAPPSGEYYRLPWYRRP
LPSNRRVGVAGGGEATHLKRASSMISAPRAGLRPPPVITSGAGAAAAGAA
AAAGAALNGVATPGGGERTRATEQREENQQQGKQQQRQQPDKQQQQQDKQ
QDEQQQQQQQQQQQQQQQQQQQQQQQDKQQDKQQSPANEVPVCFAATESP
TERPPLTTPMRSPTSAFEAVADRAGAAAQQAASNVVSVNAQADVHATPTA
NSMAADRDESTREEGGSADRSRSGGTAVAAGTEQPRGTSPEKEHAAESEE
LEKLRAEVARLKREMASMAAAAATTGITTPKQQKSGGSRRRPSQRIETSS
PVASFSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWM
QQRRRSSSSSSGTMERRSSGGRTERRYHRDSIGVGFSGKSRPGSVLPAPR
KDSSNGGERSRGSSEDVGDEVGLLSPPVNGTKIEGPSPASREKEKTAAVL
EGRRRDSGADSINGASGAGAGAGAGGDGADRGARGSESAGSDASVRRGGA
RGNESAGSDASMRQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATR
IGETVTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETV
RRRGGVDGNGRVWRWVLAQRTEDQTVRQAVISHGLPRFGRRHIWAAWAAV
ATPETYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLK
RVLVRCAELGAVKEAGYIQGMNYLAGFILITFADCVLSEREDLKSRSSRN
RATSGGSSTCRSNAPADSAAAGDVTEPSDVQPGPANEGGTAVETEGKGGE
AEKEAAVKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTEL
VEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWD
LFMWYGRRGPAVLVWVALAVLHGCRQGMFESHGLPATVKAVRRYAEGCKT
FDDLVRQAPVGLNQVVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMT
GEPVYLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLT
SPRSPFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRGGGGGGGGG
GGDNLPPTSPRFSTPSRQRQLRRAASTSWW*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig96:257587..268646+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig96.17581.1 ID=mRNA_E-siliculosus-1a_M_contig96.17581.1|Name=mRNA_E-siliculosus-1a_M_contig96.17581.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=11060bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:257587..268646+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GTGAAGGACAAGGTGCTAGGAGGGCCTGAAGCACGAGGATAGTGCCCTTT GTCTCCCGAGGGCGAGAGTTCACCCCTTCGGTAAGAGAAAGCGTGGAGAC GAGAGTGCTAGGCTTGGATACATGTACCCTACCTCCAGTCGCCGGCGACT TCATGGACTCCCAAAAACTGAGCCGAAAAAGTACTCAACCGACGCATGAA CGGTCTCGACCATACCACAAAAACATGGCAGGTAGTGATAGAAAGCACCG ATTAATGGCGTTCTTGTAGTTGATCGCTTCCTCCTCGGTGCGCTCCTGAA ATCGCAAATTGAGGGTTTGAGTTACAAGACGAAGAAGGGATCATGCAGCA GGAATGCAGCTGGGAAAATGTAAATGTCCTTGGTCCAAAAATCCACAACT CAACAATTTGGGGAAATCATCCATTCATCCAAGCCCGTACAAGCGCTTTT GCTTCTTTCCTCACGCTCGTGTTCTCTTGCACGTGAACTCCAGCGGCTAG AGAGACGATCCCGGGGCATGGTATCCACTAGAAGTACTTATCTATCTACA GAAGTACCATTTTCGGAGTAACATTTTCAAAAATGAGGCGGCGCCAAGAG CCAAGAGCCAAATGTTTTTTTTTTTTTGGTGTTCCGCCACTTTTTCCTCT CAACCGCTCCAAAAATACAGATTACTCTCTGTACACTTACCACAAAACCA TGGTACCTGTATTGTGACTGAAGCGAGGTCCAATCTGGGGTCACAAATAA GTTTCCTGTGCGGTTTAGTCTATCCCTACGGTTTCATAGCATTGTAACTC GACATTTTTAGGCAGCTCCCTTCCTTCTCTCCTGTTGTGGTCTGCACGCT GCACGTGAAAAGCCCTCGTTGCTACTTGCTACTCATACTTATGTGCTTAG CTGTGTTTTCTTCAGCTGTTTTGCGTCCAATCGATTCTGGGTGCCGGTTT ACACCTTCCGGTGATTGTGTGAAGCACCAGGCGGAGTCACAGAAGAGGGA CGTAACCACTAGATTCTATTTTTTCTCCACCGTCCCCTCTGGTATTACTT GCCTCCTCCAGTTTTTGAGGGGGCGGGGGAGTTGTGCAAATCTCCGCTTC AGCCATCCGGGAAAGGCCGGCCTTGAGCGTTTTTTCAGCGTCTTTTCCAA GTATTAATGGACCTGGTAAATCAGTCCTACAGGCACCTGGTCGTTGAACG CCTTTTCTCTCGGCAAAATCATGGCGCAAGATGGCATTGCTGATTCTACT GTGCGGGCGTACAAGACACGTCCGACCTCTGTCTAGTGCTCCTCTTGTGC GTCCTTTTTTGTGATGTTGTTGCCTCTCAGATCCATCCCCATTCCGTGGT ATCAGGAGATGCGCAGCGTTAGGCCGGATGCCCAACCAGCGGACAGCGCA GGCCTCGGCGGCAGGGGTGGCGACAGCAGCCCCGAGTCCTTTCCGGCCGG GCATCAAAGCCGCCTGGCCGTGCCTCGCAACTGGAGGGCGAGCATGAGCA GGAGGAGGAGCGAGGGGGCAGCCGGTAGCGGCAGCGGCATCAACAGTGGC ATCACCCGCGGCGGCAGCGGGAGAAAAGAGCAACAACAGTCGTCGTCGCA TCTGGAGAAGGACGGGGAGTGGTTCGGCGATGCTCGCGGCGTGGCCGGCT CGGCATCTGAGAAGGTTCTGGGTGCTGCGGTGCAGGTTAGTCTTTTTGGT TGTCCGACGCCCCACAAGGCACGAGCAACCCTGCGGTGTGCAAACGAACG CACCACTTCCTTCCAGACATGAGTACACGCAGCTAGAAGTGTTGCTGCCG CATCAGACAGGGTTCGGTCGGCTATCCCAAAGGTGGAGAAACAGCCGAAA AGACCACTTGTGTTATCAGCACGCGCTCTGTTCATCATGCGCTCTATTCA GCTTGCGTGGGGTTGTGCCCGCTGCCCCCGATTGGCCGCCGTCGCAGTAC ATTCGTCGCATTGGTAGCACACCAGCATACGTATGCGCACGTACTTGAGC TTCTTCGGCACCGCAGACCCGACAAACGATAAACGCCGGGCGCCCGCTGG GTCGCTTAAGTACGGTTGCCCACCCCAAAACCTCAAACGCACCCGCCTTC GCTTTGCCCAGGACCAAGAGCAAGACTCCCCGGCGATGAGCCTCCTCTGC TCCATCACCAAGGCCTCGGCAAACGCAGTGCCGGAGTTGTGTTCGCCCTC GTCCTTGACGGGGGACGCGGCGGGCCCCCGACAATCGCGGCTCCGGCAGA GGGGGGGGCCGTCGCGCCCGCGGTTCTCCTCCGTCGGTAGCGCCGGTAGC GGCGGCGGGGCCGTCGGCGGGGGCAGAGGCGTTTTCGCGCCGCCCTCCGG AGAGTATTACCGCCTTCCGTGGTACCGGCGACCGCTGCCGTCGAACCGGA GAGTGGGCGTGGCCGGCGGCGGGGAGGCGACCCACCTGAAGCGGGCGAGC TCGATGATTTCCGCCCCCCGCGCGGGGTTGAGGCCGCCACCGGTGATTAC CAGTGGTGCTGGCGCGGCGGCGGCGGGGGCGGCGGCGGCGGCTGGTGCGG CTTTGAATGGTGTTGCGACTCCCGGTGGGGGAGAGAGAACGCGGGCTACT GAGCAGCGGGAGGAGAACCAGCAGCAGGGGAAGCAGCAGCAGAGGCAGCA GCCAGACAAGCAGCAGCAGCAGCAAGACAAGCAGCAAGACGAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG CAGCAGCAGCAGGACAAGCAGCAGGACAAGCAGCAGTCCCCAGCAAACGA GGTGCCCGTTTGCTTCGCGGCAACCGAGTCGCCGACGGAACGTCCCCCGT TGACCACGCCGATGCGGTCGCCGACCTCCGCCTTTGAGGCGGTGGCGGAC AGGGCGGGGGCAGCGGCACAGCAGGCGGCGTCGAATGTGGTTTCTGTGAA CGCACAGGCAGACGTTCACGCCACACCTACGGCAAACTCTATGGCCGCGG ACCGCGACGAGAGCACCCGGGAGGAGGGAGGTTCTGCGGACCGGAGCAGA AGCGGGGGTACTGCTGTGGCGGCGGGAACGGAACAGCCCCGCGGAACCTC TCCCGAGAAGGAGCACGCTGCTGAGTCCGAGGAGCTGGAAAAGCTGAGAG CGGAGGTTGCTCGGCTCAAGCGAGAGATGGCGTCCATGGCGGCGGCGGCG GCGACGACGGGAATCACAACCCCGAAGCAGCAGAAATCCGGTGGCAGCAG GCGCCGCCCCTCGCAGAGAATAGAGACATCGTCGCCCGTCGCTTCTTTTT CTTCTTCTCATGCCCAAGAGAAGCACCCGGCCTGGCAGTGGGACGCGACC GCAGCCGAAGGCGGGGAATCCTCGGACGCCGACGGGGCTAGCCGCCCGAT GCCAAATCGCCTTCGCGCGGATAACTCCTGGATGCAGCAGCGTCGACGAA GCAGCAGCAGCAGCAGCGGCACCATGGAGAGGCGCAGCAGCGGCGGCAGG ACGGAAAGGCGCTACCACCGAGATAGCATCGGCGTCGGTTTCAGCGGCAA GTCGAGGCCCGGGAGCGTGCTCCCGGCCCCGCGCAAAGACAGCAGTAACG GCGGTGAGCGGAGCAGAGGGTCTTCCGAGGATGTCGGAGACGAAGTTGGC CTGTTGAGCCCGCCGGTAAACGGTACCAAGATCGAGGGCCCGTCCCCCGC TTCGCGAGAGAAGGAGAAGACCGCCGCCGTCTTGGAGGGCAGACGCCGGG ACAGCGGCGCCGATTCGATTAACGGGGCGAGCGGCGCAGGCGCAGGCGCA GGCGCCGGAGGCGATGGTGCCGACCGCGGCGCTCGTGGTAGCGAGAGCGC AGGCAGCGACGCTTCGGTGCGCCGCGGCGGCGCGCGCGGTAACGAGAGCG CCGGCAGCGACGCTTCGATGCGCCAGATGTCGGTCTTCTTTCCGGTTATT GCTCCGCCGGACCCCAACGCGGACGCAGGCGGCACAGAAACCGCCGAGGG AGCGGCAGCACTAGCGTCCGCGGCGGCGACGCGGATTGGAGAAACGGTGA CCCCGCCGGGGGCCTTGCGCGCGGCCCGGGCCGCCCGGGACGCCGTGTCG GCGAAGAAGCAGCTGCAACAGCAGCAGCAGCTGGCGGCGAGGCACGCGCC CGTGGTGTACGCCAAGATTCCCGTCGAGACCGTTCGTCGGCGTGGCGGGG TCGACGGCAACGGGAGGGTCTGGCGCTGGGTGCTGGCGCAGAGGACGGAG GACCAGACGGTGCGGCAGGCCGTGATTAGCCATGGCCTCCCGCGGTTCGG GAGGCGGCACATCTGGGCGGCTTGGGCGGCGGTCGCCACGCCTGAGACGT GAGGGTGTTTTTGTTGTGGTGCTGCCGCTGCACCTTCCGTGTGGGGGGAC TTTCGTTTGTGTGGTTTGCAGCCACCGAGACGCATGCAGCAGGGGCCTTG GCCTATGCATAGGACCTGTCTACATTTACCTCAAAGCTGGTAGACTGGTA CAGCGAGAAAGCTTGCACTTATAAAAAAAGAAAGAGAGGATAACCTGTGG CAGTACCACCGTGGTGTCACGAGTTTCGTGGTTGCCGAAAACACACCGCT CTGGAGAACATTTTCAGACGGCACCAGTTTCTGTCTGTCTCAGATGGCGT ACCGCGTTTACTCCATGGCTGACATCGCACGTCGACACGTCGACCATCTC TTGTCTGCCACCACCCTGTGCCCCGCCCCCCCACTCTACCCGCCATGTGC AGCTACAAGAAACCAAAGCAGTCGTCCGACCCCGCGAAGGAGGGCTCTAT CGTCAACACCATCGCGCACGATGTCGCTCGGACCAAGATAGTTCACCCGC TGTTCGGGAGCGGAGGGCAGGGGTTGGCCATGCTCAAGCGGGTGCTAGTC CGCTGCGCGGAGCTCGGTGCCGTGAAGGAAGCCGGGTACATTCAAGTGCG TGCGTGTCGGACACCCAAGACTGGACGGAGGAGGGTTTTACTCGCTTCAG TAGTTTCACCGCTGTCTCTTGCGGAGATGGAGTAGCGGAGGGTGGTCCGT GGTTGGTTCGCCTTTGGGTGATTCCCTCGTGCATCGCACGCATGAAGTAG AAAATAAGCGTGTTACAGGTTGTGCTGTCCATTTCTCGTGTGAATAGGGG TCGCTTTAACCGTTCACGCCCCGTGGGCTCATAACGTGTGCAACGCAGCG TCTGGTGAATCGTAATGTTCTTTTTTGAGGAGGTGTGCCTGGTGCTGGCA TTCAGTCATTGCGATGAATACCGTGTTAACCGCTGATGGTTTCAAGAGTG AACGCAGTTGTCGTCAGCCCTTGCCCTCTTATCCTTTTGAAGGGGAGGTC TTTTGCCATTGGTCCTACTCAGCTGATACCTAACCGGTGGTCGGCCACGC TGCTTGGCATTGTGGAATCAAGGGCTGGCTCATGTAGCACACGGAATCAA CGGCATGGTTGTCCACACGAAGACGCTGTTGCCCCAATCTATCTCAGCCC GTTGGTTTAACGCATGCATTTTTATTGCGTGCGTTTCGCATCTTTTCCCG CCGGAAACACAGGGCATGAACTACCTCGCGGGTTTCATCTTGATAACCTT CGCCGACTGCGTTTTGTCCGAGCGGGAGGACCTCAAGTCCCGCTCCAGCC GCAACAGAGCCACCAGCGGGGGCAGCAGCACCTGCCGCAGCAATGCGCCG GCCGATTCCGCCGCAGCCGGCGACGTCACAGAGCCGTCCGACGTGCAACC CGGGCCCGCGAACGAAGGGGGTACGGCGGTGGAGACGGAGGGTAAGGGCG GGGAGGCGGAGAAGGAGGCGGCCGTGAAAGAACCAACGGTGGCCGAGGTT GCCCAGATAGAGAACGAGTGCGTGCAGATGTTGCAGGGGGTCATCGCGCT CCAGGGGGGCGTGCTGTCCAGAGACCTGTGGGGCTTGCATGCGGTGAGTG GAGGGGGTGGGGGGCGGGGGGTAGCAGGGGTCGCCTGTACATGGCAGAAT TCTGAAAGGAGTGGGTGGCGAAGGATTGAGGGGGAGGGAGGCACGTGGTG GCACGCTGTAGTAGTGTCGGGCTCAGCATGTTGACCGTTGGTGTTTCATT TTCTGGTCTGTTTTTGGCCAGCATGAGCACAGCCGTCAATGGCAGTCGGC ATTCCGAGTGTGCTGCGCTCGCGCGTGTGTGTGTCTTTGCTATTAGCGTC AACGGCGCTAGCTGGCTGACCAAATGCGAAAACGTCACGTGTGTGTGTGT GTATCCCATTTTTTTGTTCTCTCTATACACCATAGTACGGCCCTTCTTTA AGCTTGTGGTTGGACCGTGCTTTGATGTTGCTGTGGTTGCATCGCCAATC ATCACTTGTGCGCCGCAACCCTTTCTTGGGCGCCTCTGATGTGCCCTGTG GCGGTTTCCGTTCTTTTTTTTGTCCAGAACACGGAGCTTGTGGAAGACCT GCTTTCGAGGCAGTGCCCGGACGTCATGGAGCACTTGAGGAAGGTTAACC TCGAGCTAATCGTTCTTACGCCCAGGTGACCGATCCGCTTGTGTTTGAGT CTGTTCAACATACCGTGGCAGGTGACGCAAGGTATCACACCCCCTGGGCT GATTTTCAAAGCTCGATTACTCCACAGCAGAAACAGTCGCGGTGCGGAGA ATGGCGGCGTTGGAACCGCCTCCTCAAGAGCTTTCCGAAAACGTATCCTT TGGATTGTGAATCTTCTTCGTCGTGGAGCATTCGAGCTCTGAAAATCGGT CCAAGGGGTGTGTTATCTTGTGTCACGTTACTGGACCGTTCGGTGACCCG ACGACCGACCGATGCAAGCGCTTTGCTTGCGAGGGGCGAGTGGGGGAGAA AGGCGGTTTCAGCATCACGAAGGAGGTTGCTGTTCGATGATCGAGTCCTG CACAGGTTGATGTCGGTAGTGAAACAAGGGTACCGGAGTTTTGTGTTTCC GCCGAAACGGCGTGTGTTGGCGGCGTACTTCTGGTCGCTGCGAAAAGACG CGAGGTCGTTGTCAAGGTCGTCATGGTGGTCCTACTGCTGTGTGAGCAGA GCAAACATCACGAGCACCTGTCATGCGTTCGTTCTGAACGCAACAACTAC CACAACGAGCGGTTGAGTGGTGGGGACTTGTTTCCGCGGGGGCGGCAGTG GCTGTTGTGGTGGAAAGTCGGCGACAAAGAGCGGAGATCAGCTCCAGATA AATCGAGACGACGCTTGGGCTTCCGTAGCGGAGTATCTCGCGCTGAGGAG ACGACCGGATGCAGAGTTGTGGTGGTTATTTTGTCATCGTGTTGTTGTTG TTGCTGCTGCTGCTGCTGCTGCTGCTGCAGCTGCTGCTGCTGCTGCGGCG GCGGCGGCGGCAGATGCTGCCGCTACTGTCCCCGCCGTGCTTTTGCTCGG AAGCGGGGCCGTAGTTTGGTCCAAAGTCTGCGGCGGCACGCATGCGTTAG AATATGAAAGAAAACATAGTTGTACGTGTGCTCAGGCCTTTTCTATGCCG TCTGCACCGTTCGGTGCGTTTTTTTTTCGCCTTCGGGGGTCGTCCCGACG GTTAGAACACGTTCTTGCCGGCCTTACCCCACGCGGATAATCTGGTTATC GTCTCTCATTCTGCTCTCCCTTCAAAGCGCTCTTGTTGTTGTTGTTGTTG TTGTTTTTGTTTTCATCATTCCCACAAGTGTTTTACACCGCCAGCGTTCA TCTCCACGTCTCTTTCCTTGCAACAGGTGGTTCATCTGCATCTACGCCGG GTCGATGTCCAACCAGTCCGTGGTTACCCGCATCTGGGACCTCTTTATGT GGTACGGGCGCCGCGGGCCGGCGGTTCTGGTCTGGGTTGCGCTCGCGGTG CTGCACGGATGCCGGCAGGGCATGTTCGAGAGCCATGGCCTGCCCGCAAC TGTGAAGGCGGTGCGGCGGTACGCGGAGGGGTGCAAGACTTTCGACGACT TGGTTCGCCAGGCTCCTGTTGGCCTGAATCAGGTGAATATCCCGGGGCAG CGAGGACGGGCTACAGCAACGCTTCATCTATCATTTGTTGCCGTGGGATG CATAAGTGTATGGGGGCAGCGAGACTCTTTGCTTCGGCTCTGGGAGATCT TTCCTCGTATACAGAGTCGGTCGTCCTTGTGTTTTTGGGCTTCAGTACTC GCTGTGCCGGGGCGGTCTGTCTGAGGTTGGGTAAGCTGTGTTTTGATTGT ATGCATTAGGTAGGTATTTTGGGGGCGACCGCTCTGAACGAGAATGGCAG TGGTCGATCTGACGCACCCAGGTGAGATAGATTGGCATCTATTTTAGCCT TGTTCTATGCATACGGGAGTGTTTTAGCGTATGCTAGCCATCTTACAGTG TCAAGAAGAAGGTGCATCATTGCCACGCGCTTGCCGAGAGGTAGAGAGAG GGAGATAGATGTAATGGTGGACAACTTGGTGCTTTGATTGTTCCGGTTCG TGGCAGGTGGTGGCCGCTTGGGAGGAGCAGGGCAACAACCGGAAGATCGC CTTGTTGGACGGAGAGGGGGCCCTTCCAGACAGGATGGCGGCCGGCTTGG TCGAAGAAATGACTGGCGAGCCGGTCTACCTGCCGCCGCCAGGTCAGAGC CGACCGGCTGCTCAATTTATTACTTTCCCCCGTTCCGTCCGCCCGTCTTT CTTTGCCGTGTTTCACTCCGATGGTGGTGTCTTCCCCTCCTCTGTGCTCG GAGACTAACGAGCACCGCGATGGGCTTGTCTCCGCTGTTGCATTTCCGCG CGAACTCGTCGCCTTGACATCAAGACAGTCCCTTGCTCCAGCCAGAAAAA TCATCGTGGTCATCCTTGCACCGACCCACCACCCACACCCGATCCCGCCC TCCCGCCAACTCTCGTGTTTGTTCTCGACCAGAAGTCCTCAGCCCGCCGC GGCACCGCCGCAGCCCGAGCGGCTTGGCCCCGGTGGCCGCAACGTCCACG GCCTTCGGCATCCAGTTCCCCTCGACCCCGGGCCGACCCCCGACACCGCT CACCTCCCCGCGGTCCCCCTTCCCGGAGTGGGCGGCCAACATCTTCAGGA GCAGCACCGGTGGGCCGAACGAAGACGGAGGCGGCGTGCCTGCTAGCGTG GACGTTGGGAGTGTGAACGGGGGGCGCGGCGGGGGCGGGGGCGGGGGCGG GGGTGGGGGCGATAACCTGCCCCCCACGTCGCCCAGGTTCTCGACACCCT CGAGGCAGAGGCAGCTGAGGCGCGCGGCTAGCACATCGTGGTGGTGAAAA CTGAAACGATTGGGCTGTCTGCGTTTTTGTCGGTCGATGTTGTCGTCCCC CCGTCCTCGCCTTTACGTTTTCATCTAATACCGTATTCGACTCGAGATTC AAATCTCGGAGTATTACTTGTATGTTCAGCCGCATACCAGCAATTGGCTG CTGACAAGCCCGAGTGCATCATTGTTACAATACTCCCTTGTCGTTTTGTA TACATGGTAGGGATTCGCCGGAACACAAAGCGTTGGAAATGGTGTGGTGG CGGTCTGCAACGCTGTGCGCAGCGGTGTGGGGTTGGCAGAGAGCCCTCTC TCCCCGTTGTTTGTTGACGACTATCTGTTGATTAATCCGAGGTTTGGTAG TAGTTTGTTTATGAAGGCAGTTGCTGCGTGTTTTCCCTCGCGTGTTGTGC AGTCGCTGTTTTTGCCTGAGTTTGTTGGCCTGCTGCTGTAGAAAAATGGG TACCGTGCGGGTGTTTTGTGTGATGTGGTAGTTGAAATCCAAGCTGTTGA TGGAGGCCAGAGTTCAATCGTTTCATTTGTTTCGGTCACGTTGGGTTTTC GGTGTGTCGGGAAGAGGAGAGGGTGCGAGTTGTTGATGTCCTGTACTTGA CCGCTGTGTTGGCGGGAAGTGTTTGCCTCCAATTCTTCTTCCTGGAGGGC GAGGGGGGGGTCAGTCGAGCCTTCTGGTGAGCATGTTTTCCTCGTGTGTT AGCGACATGATGGTATGATCGGTGGGTCAATTCTTTGGAGTCTTCTCACC GGGAGGTCAGTTGGCTTTTACCAGCAGATCAGATCGGGACAAAGACGGCT ACACCACCTAGCTGCGCGTGTGTGTGGGTGGTGGGTGTTTGGGTGGTGGA AGCTGTGTGTGTGATAACCCATTTCTCTAGACGTCAGTTTTACATCTTTC TTGATTGTTTAGACGCACCAGCCGCGGTTATTCTCAGGAGAAGAGTCAGA CTCGCTTGTCCCCCCCCCACTTTCTACACCTTCGACCCTGTGGTTGCATT CATTTCCATCGAGAGAACGGTTGAGGGGTCCCTTTTCCCCTCGTCGACCG TGAAGTCGAATTTGTGCGCCCACGGCTTATAGTCGTTGTACACCTTGCTT TAGTGGGGAAATTATGAGCGAAATGCACTTGCTGCAAGCTTCATTCCTGG AGCAAATTGTCCGTGTTCCCAGAGAAGACAGTCCCTTGGCCAAATAACAT GGAGGGTTAAATAGTTGCTCCCGAATTGTCAAGGCTGGACGCATTTTCTG GGGCAGGACGTATGTATACGCTCGTGGCGGGGGACTCTGAAAAATGTGTA CACAGTTTAATATTTTATTGGTGTCTTGTAGGGATAGCTTGTAGCAAGAG GAGGGTGCTTGGACCGGGAGAACCACGTGTCGGTATCGGCGTCGCAGAGT TCTTTTGGTAGCCGGTAGTCGGTGTGATGGGGAGACAGATTGTAGTGGCA GCCTTTGCGCGAATACATGCATATGTTATTGTTGTCCCTTGCAAGGAAGT GACGGGTCATGCGAAAGAAGCTGTCGCATGCGACAAAAGCACGTGGTGTT TTTCATACGTGTAGTCTAGCTGGGGAGCTTTTGACACGTTGTTGGCGAAG GAAGAGAGCGATCTGGAACCACCGGCTGTACAGACTCCTGTCCCCGGTGA ACGACGTGACTTACGTCGCTGTACGTTGTGTGTACAAGTGTTAATGCGAG GATTTTAGGATTTGGCAGCCGTTCGTCTCGGCAGTCGCGCGTACAGACGG CAGAGCTTCGCCACCACGCAACTTCTGACATTCGCCGGCGGCGGCATGTG CGTGAGCGCC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:257587..268646+

>mRNA_E-siliculosus-1a_M_contig96.17581.1 ID=mRNA_E-siliculosus-1a_M_contig96.17581.1|Name=mRNA_E-siliculosus-1a_M_contig96.17581.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=7986bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:257587..268646+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCGCAGCGTTAGGCCGGATGCCCAACCAGCGGACAGCGCAGGCCTCGG
CGGCAGGGGTGGCGACAGCAGCCCCGAGTCCTTTCCGGCCGGGCATCAAA
GCCGCCTGGCCGTGCCTCGCAACTGGAGGGCGAGCATGAGCAGGAGGAGG
AGCGAGGGGGCAGCCGGTAGCGGCAGCGGCATCAACAGTGGCATCACCCG
CGGCGGCAGCGGGAGAAAAGAGCAACAACAGTCGTCGTCGCATCTGGAGA
AGGACGGGGAGTGGTTCGGCGATGCTCGCGGCGTGGCCGGCTCGGCATCT
GAGAAGGTTCTGGGTGCTGCGGTGCAGATGCGCAGCGTTAGGCCGGATGC
CCAACCAGCGGACAGCGCAGGCCTCGGCGGCAGGGGTGGCGACAGCAGCC
CCGAGTCCTTTCCGGCCGGGCATCAAAGCCGCCTGGCCGTGCCTCGCAAC
TGGAGGGCGAGCATGAGCAGGAGGAGGAGCGAGGGGGCAGCCGGTAGCGG
CAGCGGCATCAACAGTGGCATCACCCGCGGCGGCAGCGGGAGAAAAGAGC
AACAACAGTCGTCGTCGCATCTGGAGAAGGACGGGGAGTGGTTCGGCGAT
GCTCGCGGCGTGGCCGGCTCGGCATCTGAGAAGGTTCTGGGTGCTGCGGT
GCAGGACCAAGAGCAAGACTCCCCGGCGATGAGCCTCCTCTGCTCCATCA
CCAAGGCCTCGGCAAACGCAGTGCCGGAGTTGTGTTCGCCCTCGTCCTTG
ACGGGGGACGCGGCGGGCCCCCGACAATCGCGGCTCCGGCAGAGGGGGGG
GCCGTCGCGCCCGCGGTTCTCCTCCGTCGGTAGCGCCGGTAGCGGCGGCG
GGGCCGTCGGCGGGGGCAGAGGCGTTTTCGCGCCGCCCTCCGGAGAGTAT
TACCGCCTTCCGTGGTACCGGCGACCGCTGCCGTCGAACCGGAGAGTGGG
CGTGGCCGGCGGCGGGGAGGCGACCCACCTGAAGCGGGCGAGCTCGATGA
TTTCCGCCCCCCGCGCGGGGTTGAGGCCGCCACCGGTGATTACCAGTGGT
GCTGGCGCGGCGGCGGCGGGGGCGGCGGCGGCGGCTGGTGCGGCTTTGAA
TGGTGTTGCGACTCCCGGTGGGGGAGAGAGAACGCGGGCTACTGAGCAGC
GGGAGGAGAACCAGCAGCAGGGGAAGCAGCAGCAGAGGCAGCAGCCAGAC
AAGCAGCAGCAGCAGCAAGACAAGCAGCAAGACGAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGGACAAGCAGCAGGACAAGCAGCAGTCCCCAGCAAACGAGGTGCCC
GTTTGCTTCGCGGCAACCGAGTCGCCGACGGAACGTCCCCCGTTGACCAC
GCCGATGCGGTCGCCGACCTCCGCCTTTGAGGCGGTGGCGGACAGGGCGG
GGGCAGCGGCACAGCAGGCGGCGTCGAATGTGGTTTCTGTGAACGCACAG
GCAGACGTTCACGCCACACCTACGGCAAACTCTATGGCCGCGGACCGCGA
CGAGAGCACCCGGGAGGAGGGAGGTTCTGCGGACCGGAGCAGAAGCGGGG
GTACTGCTGTGGCGGCGGGAACGGAACAGCCCCGCGGAACCTCTCCCGAG
AAGGAGCACGCTGCTGAGTCCGAGGAGCTGGAAAAGCTGAGAGCGGAGGT
TGCTCGGCTCAAGCGAGAGATGGCGTCCATGGCGGCGGCGGCGGCGACGA
CGGGAATCACAACCCCGAAGCAGCAGAAATCCGGTGGCAGCAGGCGCCGC
CCCTCGCAGAGAATAGAGACATCGTCGCCCGTCGCTTCTTTTTCTTCTTC
TCATGCCCAAGAGAAGCACCCGGCCTGGCAGTGGGACGCGACCGCAGCCG
AAGGCGGGGAATCCTCGGACGCCGACGGGGCTAGCCGCCCGATGCCAAAT
CGCCTTCGCGCGGATAACTCCTGGATGCAGCAGCGTCGACGAAGCAGCAG
CAGCAGCAGCGGCACCATGGAGAGGCGCAGCAGCGGCGGCAGGACGGAAA
GGCGCTACCACCGAGATAGCATCGGCGTCGGTTTCAGCGGCAAGTCGAGG
CCCGGGAGCGTGCTCCCGGCCCCGCGCAAAGACAGCAGTAACGGCGGTGA
GCGGAGCAGAGGGTCTTCCGAGGATGTCGGAGACGAAGTTGGCCTGTTGA
GCCCGCCGGTAAACGGTACCAAGATCGAGGGCCCGTCCCCCGCTTCGCGA
GAGAAGGAGAAGACCGCCGCCGTCTTGGAGGGCAGACGCCGGGACAGCGG
CGCCGATTCGATTAACGGGGCGAGCGGCGCAGGCGCAGGCGCAGGCGCCG
GAGGCGATGGTGCCGACCGCGGCGCTCGTGGTAGCGAGAGCGCAGGCAGC
GACGCTTCGGTGCGCCGCGGCGGCGCGCGCGGTAACGAGAGCGCCGGCAG
CGACGCTTCGATGCGCCAGATGTCGGTCTTCTTTCCGGTTATTGCTCCGC
CGGACCCCAACGCGGACGCAGGCGGCACAGAAACCGCCGAGGGAGCGGCA
GCACTAGCGTCCGCGGCGGCGACGCGGATTGGAGAAACGGTGACCCCGCC
GGGGGCCTTGCGCGCGGCCCGGGCCGCCCGGGACGCCGTGTCGGCGAAGA
AGCAGCTGCAACAGCAGCAGCAGCTGGCGGCGAGGCACGCGCCCGTGGTG
TACGCCAAGATTCCCGTCGAGACCGTTCGTCGGCGTGGCGGGGTCGACGG
CAACGGGAGGGTCTGGCGCTGGGTGCTGGCGCAGAGGACGGAGGACCAGA
CGGTGCGGCAGGCCGTGATTAGCCATGGCCTCCCGCGGTTCGGGAGGCGG
CACATCTGGGCGGCTTGGGCGGCGGTCGCCACGCCTGAGACGACCAAGAG
CAAGACTCCCCGGCGATGAGCCTCCTCTGCTCCATCACCAAGGCCTCGGC
AAACGCAGTGCCGGAGTTGTGTTCGCCCTCGTCCTTGACGGGGGACGCGG
CGGGCCCCCGACAATCGCGGCTCCGGCAGAGGGGGGGGCCGTCGCGCCCG
CGGTTCTCCTCCGTCGGTAGCGCCGGTAGCGGCGGCGGGGCCGTCGGCGG
GGGCAGAGGCGTTTTCGCGCCGCCCTCCGGAGAGTATTACCGCCTTCCGT
GGTACCGGCGACCGCTGCCGTCGAACCGGAGAGTGGGCGTGGCCGGCGGC
GGGGAGGCGACCCACCTGAAGCGGGCGAGCTCGATGATTTCCGCCCCCCG
CGCGGGGTTGAGGCCGCCACCGGTGATTACCAGTGGTGCTGGCGCGGCGG
CGGCGGGGGCGGCGGCGGCGGCTGGTGCGGCTTTGAATGGTGTTGCGACT
CCCGGTGGGGGAGAGAGAACGCGGGCTACTGAGCAGCGGGAGGAGAACCA
GCAGCAGGGGAAGCAGCAGCAGAGGCAGCAGCCAGACAAGCAGCAGCAGC
AGCAAGACAAGCAGCAAGACGAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGACAAGCA
GCAGGACAAGCAGCAGTCCCCAGCAAACGAGGTGCCCGTTTGCTTCGCGG
CAACCGAGTCGCCGACGGAACGTCCCCCGTTGACCACGCCGATGCGGTCG
CCGACCTCCGCCTTTGAGGCGGTGGCGGACAGGGCGGGGGCAGCGGCACA
GCAGGCGGCGTCGAATGTGGTTTCTGTGAACGCACAGGCAGACGTTCACG
CCACACCTACGGCAAACTCTATGGCCGCGGACCGCGACGAGAGCACCCGG
GAGGAGGGAGGTTCTGCGGACCGGAGCAGAAGCGGGGGTACTGCTGTGGC
GGCGGGAACGGAACAGCCCCGCGGAACCTCTCCCGAGAAGGAGCACGCTG
CTGAGTCCGAGGAGCTGGAAAAGCTGAGAGCGGAGGTTGCTCGGCTCAAG
CGAGAGATGGCGTCCATGGCGGCGGCGGCGGCGACGACGGGAATCACAAC
CCCGAAGCAGCAGAAATCCGGTGGCAGCAGGCGCCGCCCCTCGCAGAGAA
TAGAGACATCGTCGCCCGTCGCTTCTTTTTCTTCTTCTCATGCCCAAGAG
AAGCACCCGGCCTGGCAGTGGGACGCGACCGCAGCCGAAGGCGGGGAATC
CTCGGACGCCGACGGGGCTAGCCGCCCGATGCCAAATCGCCTTCGCGCGG
ATAACTCCTGGATGCAGCAGCGTCGACGAAGCAGCAGCAGCAGCAGCGGC
ACCATGGAGAGGCGCAGCAGCGGCGGCAGGACGGAAAGGCGCTACCACCG
AGATAGCATCGGCGTCGGTTTCAGCGGCAAGTCGAGGCCCGGGAGCGTGC
TCCCGGCCCCGCGCAAAGACAGCAGTAACGGCGGTGAGCGGAGCAGAGGG
TCTTCCGAGGATGTCGGAGACGAAGTTGGCCTGTTGAGCCCGCCGGTAAA
CGGTACCAAGATCGAGGGCCCGTCCCCCGCTTCGCGAGAGAAGGAGAAGA
CCGCCGCCGTCTTGGAGGGCAGACGCCGGGACAGCGGCGCCGATTCGATT
AACGGGGCGAGCGGCGCAGGCGCAGGCGCAGGCGCCGGAGGCGATGGTGC
CGACCGCGGCGCTCGTGGTAGCGAGAGCGCAGGCAGCGACGCTTCGGTGC
GCCGCGGCGGCGCGCGCGGTAACGAGAGCGCCGGCAGCGACGCTTCGATG
CGCCAGATGTCGGTCTTCTTTCCGGTTATTGCTCCGCCGGACCCCAACGC
GGACGCAGGCGGCACAGAAACCGCCGAGGGAGCGGCAGCACTAGCGTCCG
CGGCGGCGACGCGGATTGGAGAAACGGTGACCCCGCCGGGGGCCTTGCGC
GCGGCCCGGGCCGCCCGGGACGCCGTGTCGGCGAAGAAGCAGCTGCAACA
GCAGCAGCAGCTGGCGGCGAGGCACGCGCCCGTGGTGTACGCCAAGATTC
CCGTCGAGACCGTTCGTCGGCGTGGCGGGGTCGACGGCAACGGGAGGGTC
TGGCGCTGGGTGCTGGCGCAGAGGACGGAGGACCAGACGGTGCGGCAGGC
CGTGATTAGCCATGGCCTCCCGCGGTTCGGGAGGCGGCACATCTGGGCGG
CTTGGGCGGCGGTCGCCACGCCTGAGACCTACAAGAAACCAAAGCAGTCG
TCCGACCCCGCGAAGGAGGGCTCTATCGTCAACACCATCGCGCACGATGT
CGCTCGGACCAAGATAGTTCACCCGCTGTTCGGGAGCGGAGGGCAGGGGT
TGGCCATGCTCAAGCGGGTGCTAGTCCGCTGCGCGGAGCTCGGTGCCGTG
AAGGAAGCCGGGTACATTCAACTACAAGAAACCAAAGCAGTCGTCCGACC
CCGCGAAGGAGGGCTCTATCGTCAACACCATCGCGCACGATGTCGCTCGG
ACCAAGATAGTTCACCCGCTGTTCGGGAGCGGAGGGCAGGGGTTGGCCAT
GCTCAAGCGGGTGCTAGTCCGCTGCGCGGAGCTCGGTGCCGTGAAGGAAG
CCGGGTACATTCAAGGCATGAACTACCTCGCGGGTTTCATCTTGATAACC
TTCGCCGACTGCGTTTTGTCCGAGCGGGAGGACCTCAAGTCCCGCTCCAG
CCGCAACAGAGCCACCAGCGGGGGCAGCAGCACCTGCCGCAGCAATGCGC
CGGCCGATTCCGCCGCAGCCGGCGACGTCACAGAGCCGTCCGACGTGCAA
CCCGGGCCCGCGAACGAAGGGGGTACGGCGGTGGAGACGGAGGGTAAGGG
CGGGGAGGCGGAGAAGGAGGCGGCCGTGAAAGAACCAACGGTGGCCGAGG
TTGCCCAGATAGAGAACGAGTGCGTGCAGATGTTGCAGGGGGTCATCGCG
CTCCAGGGGGGCGTGCTGTCCAGAGACCTGTGGGGCTTGCATGCGGGCAT
GAACTACCTCGCGGGTTTCATCTTGATAACCTTCGCCGACTGCGTTTTGT
CCGAGCGGGAGGACCTCAAGTCCCGCTCCAGCCGCAACAGAGCCACCAGC
GGGGGCAGCAGCACCTGCCGCAGCAATGCGCCGGCCGATTCCGCCGCAGC
CGGCGACGTCACAGAGCCGTCCGACGTGCAACCCGGGCCCGCGAACGAAG
GGGGTACGGCGGTGGAGACGGAGGGTAAGGGCGGGGAGGCGGAGAAGGAG
GCGGCCGTGAAAGAACCAACGGTGGCCGAGGTTGCCCAGATAGAGAACGA
GTGCGTGCAGATGTTGCAGGGGGTCATCGCGCTCCAGGGGGGCGTGCTGT
CCAGAGACCTGTGGGGCTTGCATGCGAACACGGAGCTTGTGGAAGACCTG
CTTTCGAGGCAGTGCCCGGACGTCATGGAGCACTTGAGGAAGGTTAACCT
CGAGCTAATCGTTCTTACGCCCAGAACACGGAGCTTGTGGAAGACCTGCT
TTCGAGGCAGTGCCCGGACGTCATGGAGCACTTGAGGAAGGTTAACCTCG
AGCTAATCGTTCTTACGCCCAGGTGGTTCATCTGCATCTACGCCGGGTCG
ATGTCCAACCAGTCCGTGGTTACCCGCATCTGGGACCTCTTTATGTGGTA
CGGGCGCCGCGGGCCGGCGGTTCTGGTCTGGGTTGCGCTCGCGGTGCTGC
ACGGATGCCGGCAGGGCATGTTCGAGAGCCATGGCCTGCCCGCAACTGTG
AAGGCGGTGCGGCGGTACGCGGAGGGGTGCAAGACTTTCGACGACTTGGT
TCGCCAGGCTCCTGTTGGCCTGAATCAGGTGGTTCATCTGCATCTACGCC
GGGTCGATGTCCAACCAGTCCGTGGTTACCCGCATCTGGGACCTCTTTAT
GTGGTACGGGCGCCGCGGGCCGGCGGTTCTGGTCTGGGTTGCGCTCGCGG
TGCTGCACGGATGCCGGCAGGGCATGTTCGAGAGCCATGGCCTGCCCGCA
ACTGTGAAGGCGGTGCGGCGGTACGCGGAGGGGTGCAAGACTTTCGACGA
CTTGGTTCGCCAGGCTCCTGTTGGCCTGAATCAGGTGGTGGCCGCTTGGG
AGGAGCAGGGCAACAACCGGAAGATCGCCTTGTTGGACGGAGAGGGGGCC
CTTCCAGACAGGATGGCGGCCGGCTTGGTCGAAGAAATGACTGGCGAGCC
GGTCTACCTGCCGCCGCCAGGTGGTGGCCGCTTGGGAGGAGCAGGGCAAC
AACCGGAAGATCGCCTTGTTGGACGGAGAGGGGGCCCTTCCAGACAGGAT
GGCGGCCGGCTTGGTCGAAGAAATGACTGGCGAGCCGGTCTACCTGCCGC
CGCCAGAAGTCCTCAGCCCGCCGCGGCACCGCCGCAGCCCGAGCGGCTTG
GCCCCGGTGGCCGCAACGTCCACGGCCTTCGGCATCCAGTTCCCCTCGAC
CCCGGGCCGACCCCCGACACCGCTCACCTCCCCGCGGTCCCCCTTCCCGG
AGTGGGCGGCCAACATCTTCAGGAGCAGCACCGGTGGGCCGAACGAAGAC
GGAGGCGGCGTGCCTGCTAGCGTGGACGTTGGGAGTGTGAACGGGGGGCG
CGGCGGGGGCGGGGGCGGGGGCGGGGGTGGGGGCGATAACCTGCCCCCCA
CGTCGCCCAGGTTCTCGACACCCTCGAGGCAGAGGCAGCTGAGGCGCGCG
GCTAGCACATCGTGGTGGTGAAAGTCCTCAGCCCGCCGCGGCACCGCCGC
AGCCCGAGCGGCTTGGCCCCGGTGGCCGCAACGTCCACGGCCTTCGGCAT
CCAGTTCCCCTCGACCCCGGGCCGACCCCCGACACCGCTCACCTCCCCGC
GGTCCCCCTTCCCGGAGTGGGCGGCCAACATCTTCAGGAGCAGCACCGGT
GGGCCGAACGAAGACGGAGGCGGCGTGCCTGCTAGCGTGGACGTTGGGAG
TGTGAACGGGGGGCGCGGCGGGGGCGGGGGCGGGGGCGGGGGTGGGGGCG
ATAACCTGCCCCCCACGTCGCCCAGGTTCTCGACACCCTCGAGGCAGAGG
CAGCTGAGGCGCGCGGCTAGCACATCGTGGTGGTGA
back to top