mRNA_E-siliculosus-1a_M_contig96.17577.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig96.17577.1
Unique NamemRNA_E-siliculosus-1a_M_contig96.17577.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: D8LQ98_ECTSI (Cilia- and flagella-associated protein 53 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ98_ECTSI)

HSP 1 Score: 533 bits (1372), Expect = 1.610e-185
Identity = 309/315 (98.10%), Postives = 311/315 (98.73%), Query Frame = 1 
Query:    1 ENARQEELHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
            ENARQEE HMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLL+YAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQ+ATDLEQARLDRESFLAEEER XXXX RKRQELLDNTAKLR QMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT
Sbjct:  174 ENARQEEFHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLDYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQLATDLEQARLDRESFLAEEEREXXXXMRKRQELLDNTAKLRGQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 488
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A835YTH0_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTH0_9STRA)

HSP 1 Score: 199 bits (505), Expect = 2.970e-55
Identity = 137/313 (43.77%), Postives = 192/313 (61.34%), Query Frame = 1 
Query:    7 ARQEELHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
            A ++  + A+I ER+A+LEAQE+  EE R R  ++++  L  QV YNA RR  L +++A +D  EL+ELRAIV AE++                         +R  AA   +++D+ LL+YA+++++AGEAEE  K++ E+  +RQY  YLK QM +EA D  + D  + +AET++W+ R+A+   + DAR ALM QVH  RQEQIR + L D  + A   EQA  DRE+F   E +       +R  LLD  AKLR Q+    A   RE+QEEYL +K+MEA ER H+ RLE Q+G V+ HHPLKHTQWYT
Sbjct:  177 AEEDAQYTAQIYERMAWLEAQEREREETRRRTAEVVKDGLTAQVRYNAARRMALEQRSAEEDRLELDELRAIVAAEEQXXXXXXXXXXXXXXXXXXXXXXXXXLREEAAALEQQRDMALLKYAVDRERAGEAEEHRKRDAEREAMRQYTAYLKAQMEREAEDAGKLDTAQADAETKMWEAREAEQAKRADARRALMAQVHAARQEQIRARRLADAAERAALNEQAAFDREAFARAEAQEADKERERRAALLDQAAKLRGQVDERAAARARERQEEYLSMKRMEACEREHKARLEAQSGKVVLHHPLKHTQWYT 489
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A7S3YAB2_HETAK (Cilia- and flagella-associated protein 53 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAB2_HETAK)

HSP 1 Score: 179 bits (454), Expect = 7.000e-48
Identity = 132/310 (42.58%), Postives = 185/310 (59.68%), Query Frame = 1 
Query:   16 EELHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
            +E +MA +   +A LE +E+  +E   + N  M +DL+ QVA NA+RR  L    AR D +E+                      A GA VR+FN+A+   R  A E  R +DL+LLE+A   +  G+AEE+ K+ EE+RV+R+Y+ YL+EQM KEA DE+  +  R   E RIWDQR+A L+AQ DAR  LM QV  GR+EQ+ LK L  +E+   D E+A   +  F   E+        +RQ+L DN  +L+ Q+ G   +   E+QE+YL  KQME  ER+H++RL++QAGVV T+ PLKHTQWYT
Sbjct:  176 DEQYMAGVMGHVAALELKERGVQEALRQANAKMVADLDDQVAKNAERRSALAAARARGDQEEIXXXXXXXXXXXXXXXXXXXXLVAAGAAVREFNQAKAAERGRAKELERGRDLLLLEHAQRMEARGQAEEERKRAEEKRVMREYHAYLQEQMVKEAEDESAIEAHRLREENRIWDQREADLRAQADARARLMGQVKAGREEQVYLKGLAAEEERKRDQEEAMRAKIEFELMEQEAAAKQAGRRQQLADNAQRLKAQIDGNAHQRRLEEQEKYLSAKQMEMMERKHQQRLKEQAGVVETYKPLKHTQWYT 485
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A7S1XRQ7_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRQ7_9STRA)

HSP 1 Score: 147 bits (372), Expect = 3.520e-36
Identity = 119/304 (39.14%), Postives = 175/304 (57.57%), Query Frame = 1 
Query:   46 RIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMA-GARARA---EREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
            R+  LE +E A    R   N+  R DL+ QV    +RR QL E   +D  +EL EL A ++ ++++   + +EAHARG EVR FNEAR  MR   A   R+QDL+LL+Y +E+++   AEE+AK++ E    R+Y E+LKE M KEA D+++ D IR+  E R+W++RDA+L+AQ +AR  LM+ VH GRQEQI+ K  RD      + EQ R D        +       +++++  DN   L +Q+A   +AR    ERE+QE       M A +    +R   +AG V  ++P  H+ WYT
Sbjct:  185 RMKVLEDREIADAHARHEANEACRRDLDEQVRIKGERRLQLIESMRKDAEEELTELAAAIQRDEDEQRRRTEEAHARGREVRAFNEARLNMRQERAALERQQDLLLLQYGMEQERKRIAEEQAKRQLEINATREYTEHLKELMIKEAQDDSEVDAIREREENRVWEKRDAELRAQTEARRRLMEIVHAGRQEQIKAKRERDAIDRILEEEQERNDAAELQKGLQMDREAAEKRKRDAQDNNTLLLKQIAMREQARLDELERERQEAEKWRADMRAVD----QRAAAEAGEVKLYYPRSHSNWYT 484
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A7S2STN1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STN1_9STRA)

HSP 1 Score: 134 bits (336), Expect = 6.170e-33
Identity = 99/257 (38.52%), Postives = 155/257 (60.31%), Query Frame = 1 
Query:  199 ELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATD--------LEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
            EL ELRA +  ++++A+     A  RG + R FNE+R  +R  AA++ R++DLVLL+YA++K++A    E  KK EEQ   ++Y EYL+ QM KEA D A  D +R+  E R W +R+A+ K ++DAR  LM+  + GRQ QIR +  R+ +++  D         +QA LDR    AE+E       +++Q + +N + +R Q+   R +  +E+Q++YL  K M+  E  H+++L +QAG +  H P KHT WYT
Sbjct:   15 ELTELRAAIARDEQEAQRHLLSAKQRGKQTRHFNESRLHIRQEAADRERQEDLVLLKYAMDKERAEIDAELRKKREEQETTKRYQEYLRAQMIKEAQDTALADSLRKADEDRNWAKREAEQKRRDDARANLMQVTNDGRQRQIRERLERETKELEEDRGDGQRFAADQAELDR--IEAEKE------AKRKQNVAENLSGIRSQIEIRRQQQMKEEQDKYLEAKIMQKVEAEHKKKLSEQAGTLRLHRPKKHTAWYT 263
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A4D9D339_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D339_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.150e-19
Identity = 82/251 (32.67%), Postives = 131/251 (52.19%), Query Frame = 1 
Query:  187 DDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQW 939
            +D +E+ +++  +  E+E AE +KK     G ++R FNE R  +    AE+ R+QD+ LL YA+E++    A EK +  + +   R Y +YL+E M KE  DE + + IR   E  +W+QR+A L+ +   ++AL  ++   RQ+Q+  KAL   E+   +            AEEE         R  +L N   L +Q    R R   E+Q+EYLR K ++  E   + R ++QAGV   H PL+  +W
Sbjct:   80 EDAREIAQIQIELTREKELAEKRKKADWLEGQKIRAFNEQRLGLMRARAEEERQQDMTLLNYALEEEAKSVAAEKDRGVKAREESRLYRKYLEELMQKEVEDEREIESIRLAKEEEVWEQREAVLQEREAKKKALWLEIDATRQQQLLYKALTAAEESEAESTLVGRWEAEQKAEEEECQRSKEAHRLAILSNREVLEKQTKALRHRVALEEQQEYLRTKHVQKEEADQQRRRQEQAGVARIHFPLRSQKW 330
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A7S0GFB1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFB1_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.030e-19
Identity = 82/222 (36.94%), Postives = 126/222 (56.76%), Query Frame = 1 
Query:  304 ARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEE--------YLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
            AR + R+    + RE DLVLL+YA++K+       K+KKE E+++ R+Y  +LK+QM KE  +  + D+IR     +IW +RD  L+AQ DAR  L+K+V +GRQEQ+R+K L ++E+     EQAR   +    EEE        +R E   N  K  E+M   +  A+  +Q+E        +LR K  EA E + + RL++     + ++PLK+T WYT
Sbjct:  239 ARYQQRIEVKARERENDLVLLKYALKKESDSTDCNKSKKENEKKLSREYEAFLKDQMQKEKDENLKVDDIRATEMEKIWVKRDEALQAQADARGNLLKEVQKGRQEQMRIKILVEEEEKEASAEQARFVAQKLKVEEEN-------ERDENSRNKVKTVERMRANKYLADHNKQQEQAKESEKYHLRKKMQEA-ETKRQMRLDQLKCNPVAYYPLKNTNWYT 452
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A6G0XRX0_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRX0_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.070e-15
Identity = 83/231 (35.93%), Postives = 132/231 (57.14%), Query Frame = 1 
Query:  256 KKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLE-QARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVV-ITHHPLKHTQWY 942
            K++A AR  +V+ FN+ R EM    A + RE D  LL+ A++K+   EA E+  +E+ +R   +Y   L++QMA EA D +  D IR++ E  +W +RDA+ +A+ DARE L+ QV + RQEQI  K     +  A D    AR+ RES  A ++       RK +E   + A L  Q A A+  AE+++Q E+L +K+M   E++H+ +L   A    + ++  K ++WY
Sbjct:  241 KRKAIARATDVKKFNQKRAEMAEREARREREYDTQLLKLALQKEADTEARERQLQEKFKRDQLEYQAMLRQQMATEAEDLSYLDAIRKKMEDEVWAKRDAEHRAEQDAREELLAQVVQSRQEQIVRKGQIKQQDAANDAAYMARMQRESDEALQKELLEQEKRK-EEAKRHQADLMAQKAAAKLAAEKQKQAEFLDMKRMTLTEKQHQAKLAALAKQPPVFNYRRKTSEWY 470
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A482SE17_9ARCH (Cilia- and flagella-associated protein 53 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SE17_9ARCH)

HSP 1 Score: 82.0 bits (201), Expect = 2.250e-14
Identity = 78/221 (35.29%), Postives = 109/221 (49.32%), Query Frame = 1 
Query:  295 FNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRV----KQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
            FN   R+ R   +   REQD VLL+YA+ K+    A E+AK+  +++   +Y +YL+EQM KEA D A  DEIR+  E ++W  RD  L+A++DAR  LMK V  GRQEQIR K    DE+   + E  ++    FL E +        + +                                   KQM+  ER H++RL +QAG V    PL+  QWYT
Sbjct:    3 FNAENRKYREEESLVEREQDGVLLDYALRKEAEQIAAEEAKRSGQRQAALRYRKYLEEQMVKEAEDTAFVDEIRKREEEKVWKARDDALRARDDARNYLMKMVDEGRQEQIRYK----DERERAEKEHDKIFARKFLDEADEAVRKERAEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKQMKHMERMHQQRLAEQAGSVRLAFPLQKNQWYT 219
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: W4FWZ1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWZ1_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.260e-12
Identity = 76/231 (32.90%), Postives = 131/231 (56.71%), Query Frame = 1 
Query:  256 KKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLE-QARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVIT-HHPLKHTQWY 942
            K++A AR  +V+ FN+ R ++    A +  E D  LL+ A+ ++   +A E+A +E+ +R   +Y   L++QMA EA D +  D IR++ E  +W +RDA+ +A++DAR+ L+ QV + RQ+Q+  K LR     A D    AR+ RES  A ++       RK  +   N   +  Q A  +A  E+++Q E+L +K+M   E++H+ +L + A    T ++  K ++WY
Sbjct:  294 KRKAVARAMDVKKFNQTRSDLTERQARREHEYDTQLLQLALRQEAETDARERALQEKFKRDQLEYQAMLRKQMATEAEDLSYLDAIRKKMEDEVWAKRDAEHRAEDDARQELLAQVLQSRQDQMERKELRKAADAAADAAYMARMQRESDEALQKELTDQDKRK-WDAKRNQVDVVAQKAQTKALMEKQKQAEFLDMKRMALSEKQHKLKLAQLATQQPTLNYRRKTSEWY 523
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LQ98_ECTSI1.610e-18598.10Cilia- and flagella-associated protein 53 n=2 Tax=... [more]
A0A835YTH0_9STRA2.970e-5543.77Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
A0A7S3YAB2_HETAK7.000e-4842.58Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
A0A7S1XRQ7_9STRA3.520e-3639.14Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
A0A7S2STN1_9STRA6.170e-3338.52Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
A0A4D9D339_9STRA2.150e-1932.67Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
A0A7S0GFB1_9STRA4.030e-1936.94Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
A0A6G0XRX0_9STRA1.070e-1535.93Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
A0A482SE17_9ARCH2.250e-1435.29Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
W4FWZ1_9STRA3.260e-1232.90Cilia- and flagella-associated protein 53 n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig96contigE-siliculosus-1a_M_contig96:214557..219907 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size921
Model size1209
Exons7
Hectar predicted targeting categoryother localisation
BRITEko00000,ko04121
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.KLT
Ec32 orthologEc-26_005610.1
Ec32 ortholog descriptionconserved unknown protein
EggNOG OGsKOG4441@1,KOG4441@2759
EggNOG free text desc.protein ubiquitination
KEGG koko:K10465
Seed eggNOG ortholog44056.XP_009040309.1
Seed ortholog evalue1.8e-13
Seed ortholog score83.6
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936531.1361778-UTR-E-siliculosus-1a_M_contig96:214556..2145831622936531.1361778-UTR-E-siliculosus-1a_M_contig96:214556..214583Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig96 214557..214583 +
1696251119.2158098-UTR-E-siliculosus-1a_M_contig96:214556..2145831696251119.2158098-UTR-E-siliculosus-1a_M_contig96:214556..214583Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig96 214557..214583 +
1622936531.294653-UTR-E-siliculosus-1a_M_contig96:219646..2199071622936531.294653-UTR-E-siliculosus-1a_M_contig96:219646..219907Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig96 219647..219907 +
1696251119.386977-UTR-E-siliculosus-1a_M_contig96:219646..2199071696251119.386977-UTR-E-siliculosus-1a_M_contig96:219646..219907Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig96 219647..219907 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936531.1529531-CDS-E-siliculosus-1a_M_contig96:214583..2146911622936531.1529531-CDS-E-siliculosus-1a_M_contig96:214583..214691Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 214584..214691 +
1696251119.2935104-CDS-E-siliculosus-1a_M_contig96:214583..2146911696251119.2935104-CDS-E-siliculosus-1a_M_contig96:214583..214691Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 214584..214691 +
1622936531.168442-CDS-E-siliculosus-1a_M_contig96:215200..2153501622936531.168442-CDS-E-siliculosus-1a_M_contig96:215200..215350Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 215201..215350 +
1696251119.3061814-CDS-E-siliculosus-1a_M_contig96:215200..2153501696251119.3061814-CDS-E-siliculosus-1a_M_contig96:215200..215350Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 215201..215350 +
1622936531.1884599-CDS-E-siliculosus-1a_M_contig96:216525..2166751622936531.1884599-CDS-E-siliculosus-1a_M_contig96:216525..216675Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 216526..216675 +
1696251119.3242407-CDS-E-siliculosus-1a_M_contig96:216525..2166751696251119.3242407-CDS-E-siliculosus-1a_M_contig96:216525..216675Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 216526..216675 +
1622936531.219138-CDS-E-siliculosus-1a_M_contig96:217211..2173761622936531.219138-CDS-E-siliculosus-1a_M_contig96:217211..217376Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 217212..217376 +
1696251119.3381274-CDS-E-siliculosus-1a_M_contig96:217211..2173761696251119.3381274-CDS-E-siliculosus-1a_M_contig96:217211..217376Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 217212..217376 +
1622936531.2442122-CDS-E-siliculosus-1a_M_contig96:218029..2181791622936531.2442122-CDS-E-siliculosus-1a_M_contig96:218029..218179Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 218030..218179 +
1696251119.3560157-CDS-E-siliculosus-1a_M_contig96:218029..2181791696251119.3560157-CDS-E-siliculosus-1a_M_contig96:218029..218179Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 218030..218179 +
1622936531.2606173-CDS-E-siliculosus-1a_M_contig96:218697..2188161622936531.2606173-CDS-E-siliculosus-1a_M_contig96:218697..218816Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 218698..218816 +
1696251119.3663275-CDS-E-siliculosus-1a_M_contig96:218697..2188161696251119.3663275-CDS-E-siliculosus-1a_M_contig96:218697..218816Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 218698..218816 +
1622936531.2782955-CDS-E-siliculosus-1a_M_contig96:219567..2196461622936531.2782955-CDS-E-siliculosus-1a_M_contig96:219567..219646Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 219568..219646 +
1696251119.376003-CDS-E-siliculosus-1a_M_contig96:219567..2196461696251119.376003-CDS-E-siliculosus-1a_M_contig96:219567..219646Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 219568..219646 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig96.17577.1prot_E-siliculosus-1a_M_contig96.17577.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig96 214584..219646 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig96.17577.1

>prot_E-siliculosus-1a_M_contig96.17577.1 ID=prot_E-siliculosus-1a_M_contig96.17577.1|Name=mRNA_E-siliculosus-1a_M_contig96.17577.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=307bp
MAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQ
TARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVV
AAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMA
KEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQI
RLKALRDDEQVATDLEQARLDRESFLAEEEREREKEMRKRQELLDNTAKL
REQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLK
HTQWYT*
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mRNA from alignment at E-siliculosus-1a_M_contig96:214557..219907+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig96.17577.1 ID=mRNA_E-siliculosus-1a_M_contig96.17577.1|Name=mRNA_E-siliculosus-1a_M_contig96.17577.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5351bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:214557..219907+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GAGAACGCAAGGCAAGAGGAGTTGCACATGGCAAAGATCCGCGAGCGCAT
CGCCTACCTGGAGGCACAGGAGAAAGCCGCCGAAGAAAAGAGGGAAAGGA
GGAACCAGCTCATGCGCAGCGACCTCAACACGCAGGTTGGTGACCTCAAT
TTAGTGCTTCTTTTGTCAATTCCTCTCCGGGGGAGTTCCGGCTATCCTCA
GAGGCGTGTTGCTGAGAGTAGTCGTCGACCGGCATGTTGGTGTTTCGTCG
TAGGGAGGCGTGCTTGAACACAACTTGTTTTGTGTGGAATTTTGGTTTGT
TTCGCTCTCCCGCATCTCACGGCGTGGCGGCCCTCCGACTCATACATGTG
CGCTCGGGGGGTCAAAAGCGATTTTGTCAGGAAACTGGATTACTTTGAGG
CCTGTCAGACCCAAGCAAGTCAACATCAACTTTGGTCGAGTGAACAACAC
CCCCTCTTTGCATCACTCTTGGTGTCTGCATTCTTCCGTGGCCACCTCAT
TGTACGTGAGGGTGGTGCGATTGTTGAACATGCCAACACCAACCACCACC
ACCAACAACAGAAATGGACCGAGAAAAAACGACTGCGCAACATCACAACA
CAAGCACGCTATTGTACATTCCCGCCCTTTCAACACACACGCAGGTGGCG
TACAACGCCGACCGTCGTCGACAGCTGTGGGAACAGACCGCTCGGGACGA
CCTAAAAGAGCTCAATGAGCTCAGGGCGATCGTCAGGGCCGAGCAAGAGA
AGGCGGAGGCGAAAAAGAAGGAGGCCCACGCGCGCGGGGCAGAGGTAAGC
TCGGAGGTTTATTTTTGCTGTGGTGGTTGCTGTCCAGGGGTTCCCAGGCG
GCACGCGTTCTTTGGTTCGGTGTCGTGCATGTTGTGTGTGGCCCAAGAGC
GCTGGTGATGTTCCTCGCTGGCAATGTCCCTGTTCGAGCACGGCAGTGTG
CGATGAAAACGCAGGGGTGGATTGATTCTTGTGGCCGATCGATCCGGCAC
AACTGCAGACAGGTACAGCCGTGAGTATACGGTACACATCCATTATGGTG
GTAAGGCAATGGAGGTGACGGATTTTGTCATCATGGGGCGCCTGTACGCT
TATTGGGCAGCATCCCTGCTCGCTGGTGATCGATATGACGATACGACAAC
GGTCTTGCAAAACGATAACTAAGCCTCAAACCATCGAGCTTTTGGCTAGA
CGAACGAGGGAGACACTCCATAGTACCTACACCAACGATTTTCATTACCA
TCACACCTGCAATTTATCGCCTTGAATTACGAGCGGGTGCGGGGAGCACC
TCACACACACACACACACATGTTGCTGTGCGTACTGACGTCACGAAACAG
GGCTACGATACCTCCGCTGCTCTAGATAGAAGCACCTTCAAACGTTTCCT
CATATAGACCTTTTCCTGGACGTCTCTCGTTGTGTGACTCTGCGAACGTT
TCATCGGGAAAGCTACGAGCTTGCACGAGGAGGCTACGCAGACGCGATAT
TCAACATGATTTTCCGACCTCACTCTCGGTCTTCCTTGCATTCTCCTTCG
TCTCTCGGACAAGGCACGCCCCCCCCCCCCGGTAGACTTCCTCTCACATA
CGCCGCATTGTAGCGCTGCATGTTTAATCGCTCTATGTTTGCCTCATTCA
ACGACGCGCTCATTAACTGATTCGTCCTGCCTTGTCCGCCGTGTGATGCT
CGCACCGACCGGTAGCGTTCTCCTACATGGGTCAGCGTCGGCCACTCGTA
CTAACGATGCCAAATAGATGCGACTGCTTTCTCCCAGCAGATGCTTGAGA
CGCTCCGCTCCGCCGCGTGCTCAGCTTTCTCGCTCTTTTCTCCTTTCCTT
GACCGAGACGCTTCTTGCCGCGACATGTGGGCGTTCGTTTTTACAGTACT
CTCGCGTGTGCTCCTTCGGTCAACCACCGGCTGTTCTGATCGGTTGATTT
TTGACGTGGGGCCCCGCAGGTGCGAGACTTCAACGAGGCCAGGCGCGAGA
TGCGTGTGGTGGCGGCGGAGCAGGCTCGCGAGCAGGACCTGGTGCTGCTG
GAGTACGCCATCGAGAAGGACAAGGCCGGGGAGGCGGAGGAGAAGGCGAA
GAAGGAGGAGGAGCAGAGGGTAGGAGACGATCTGGGGGGGGAGGGAGGAC
AATGCTGTTTACCATTGCCGTGTTTGTGTGTTCCTTGATCTATCTCTAGG
AGGAGCCCCGGTAATTTCATACTCCTGCTGTTAGGCACACCGCCGGAAGT
CGGGTGCTCTTTATCGCGGTCCTCTTCTCTTTGAATTTTTGAGCCACCTT
TCGCATCTTGGTGTAGCAACGTAGAGATGGGGGGGCAATGCCCGATATTC
TCCGTGTTTGTTCTTTCTTGCATTTGACACGATCAGAGCTATACCATTTT
TGTTGTTTCATGTTTGCCGGTTTCGATCGAATGCTGTTCGCAGGTGTTCA
GCAATGTTCTGTTCCGAGTAGAGACATGAAGGAGGCACACACCAACTTCC
CCGCACAGCACGATTTGTTCAGTTGTTTCCTGTCTTGGACCTCATGAAAC
TCGTTTCCCCTACAACCCACCTATGTTTGATTAGCCTCGTTTCCCCTCTA
CTCCATATGTGTGATGCCCATGGTTTTCGTCGCTGTATCCGTCGTACGGC
GGCAGGTGCTGCGCCAGTACAACGAGTATCTCAAGGAGCAGATGGCCAAG
GAGGCCGCGGACGAGGCTCAGTACGACGAGATCAGACAGGAGGCGGAGAC
TCGCATCTGGGACCAGAGGGACGCGCAGCTCAAGGCGCAGAACGACGCTA
GGGAGGCCCTCATGAAGCAGGTGTTGTGGTGGTTGTTGTTATTATTGTTG
TTGATGTTATTGTTGTTGTTGTTGTCGCCTCCATGTTCAACACCATTCAA
CATGGACCGGGCCTCTTAAGATCCGGAACTACTTTTCCCGAACAAGGCAG
GAGCAGTTCTCAACAACAAACCTGTATTCTGCAGTTGTGAGAAACACCTC
AAAGCAATTACTGACAGCTTCTACCAACCACCTCGGAACACTTACACGTT
GCTAAACGATGTTGTAGACTCGGAACTGTCCAAATCCCGGTCGCTCGACC
TGCCTCTGCCCCCCTCACGTGTGTGGATCCGCGGATCTGTCCATGGGACC
ACCCCTCATCCTTTCTCACCCGTCCACCCATGTACCTGTCAAAGCTGCCC
TTCCTTGCGTCCGTCCCTCTGTAACGGTCGTGTCTGCAGATTTCTTCCGG
TCTATCGGTCCGTCTTTGCGGAGCTGTGATGCTTCTCATCCGTCCACCTA
TGTACCTGTCCGCCTGTTTCTCCCATCCATGGATTTATTAATGTGAAGAC
AACAACAACAACAACAATATATACATATCCCCATCTGTCCAAACCATCAC
CGGTCGACCCTTTCATCTACTGTATCCGTTTGTCGTCACGTCCTATTTTT
GCCGTCGTTCGTGTCTGCATCAGGTGCACCGTGGTCGGCAGGAGCAAATC
CGCCTCAAGGCGCTCCGCGATGACGAGCAGGTTGCCACCGACTTGGAGCA
GGCGAGGCTCGACAGGGAGAGTTTCCTGGCGGAGGAAGAGCGGGAGAGGG
AGAAAGAAATGCGCAAACGCCAGGTAAATTTTATAGGTGGCGTACAGAAT
AGACTACAACGTTTGTGCGAAAACGTGATGTCCTGGTACGTACTAGTTGA
GACGAAGGTGTGTGAGATGTCTTTTGCTCGAGTTGGTTTGAGAAGGCGAT
GCGTGGGGCGTGGCGCCTGGACGGGAAGATAGACAGAGGAGGCGTGCGTG
CGACACATACACATGTTTTCTTCTGTATGCGGATCAAGAAACACGTGAAA
TAAATTGCCATATTGATATATTAAGTGCAGCGTGTGTGTTACGGTGTCGG
GACGGAAGCTCAGCAAGAACTTAAGCTACGCTGAACGAGTTCATTGCATT
GGGGGCGACGAATTATCACCCCCCTCTTCGTCTGCCTTGTGTGCTTGAGT
TGCGTCACCCTGGGCACCATAGTAGACGCCCGCCATTGCAATATATTGGT
TGACTGCAGTAAACGTTACTCTCACCACTCCCCTTTTCTTATATGAAGCA
CCACTTTGTCACACGTCCCCTACTCTCGTTTCGGGGCGCAGGAGCTGCTA
GACAACACCGCCAAGCTCAGGGAGCAGATGGCGGGCGCCCGTGCCCGAGC
GGAGAGGGAGCAGCAGGAAGAGTACCTTAGGGTGAAGCAGATGGAGGCGT
ACGAGAGACGGTGAGAGTTCTGGGATTTGTTTTACCTGGTGAATTGTCCC
ACCTTCCGTAATGGCTTGGGGTGTACCGCCTTTATGGGGTCTCGATCGTA
CCGAGGCCCTTTTCCTTCTTAGTCCAACATCTCTTTGTGAGCGTCGACCG
TCGTTCAAAACTGTGTAGTACCCAGCCTATTTCATGAGGTTTTTGCTCTT
TACTGATCACTCCCGGTCACTGAAGATGGTGTCTCTTCACAAGCACCGCT
GCAACCTTCCTCCTCTGCCGACTTCTAACACCGCGCGGTCCTCGATCCGA
GTGCGACTTAAGAAGTAGTGAGGACCAACCTAGCGGTGTGTAATAGTTTA
CGGCACAAAAATATATTTTTGGAACACCCACCATGCAGCTTGGTGTGCGC
CCGCACGTGTAGGCCACAACCCCCCCCCCCTCCCTACCTGCTCGATCTAT
ACACGAAAGTCTTGAACATCTTACGGCCAAACGAAGGAAGAGGAACGGCA
GCTTAGAGCGCTTGCATCAAGGCCTCAGTGCGCGCAGTCTCGTTCTTGCA
ACGTCGGTGTATGCGGTGTGGGGGTATACACGCACGACCTGCGTTGACAC
GACGGGACATCCACAGATCCTACCCAGTGAATCCCACGCTGAACGCTCGC
CATCGACACTCTTTTTGTAGTGTTGGTCCACATCAGTAAAACTCCCTTTT
CGTGCCCCCCCCCCTCCCCGCCGCCCGGTCCCGTGCCCCTTGCGCATATA
AATGTCTGCAGGCACAGGGAGCGCCTGGAGAAGCAGGCGGGTGTGGTCAT
CACGCACCACCCCCTGAAGCACACGCAGTGGTATACGTGAACGTCGCACG
TCATGTTGTTGCAAACGTGAAAAACCGTGGTGCACGTCCAGTGAGATTAG
TTCTGGTGTGTCGACGAGTAAGGTGCGACCCGTAGGTGTTGCTGCTGTAG
TGAAACACACATTACGTGGAAGTCGTGAAGTTTCTGCCTGGGATGACCGC
TGCGGGGTACGGGTATAAGGTAGGACGGCATTACGCGATATATGCGAGGG
AGAACGGCCAAAGCTGTGTGCCATCGGCGAGGAAAGGAAAACAAACGAGA
G
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:214557..219907+

>mRNA_E-siliculosus-1a_M_contig96.17577.1 ID=mRNA_E-siliculosus-1a_M_contig96.17577.1|Name=mRNA_E-siliculosus-1a_M_contig96.17577.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1842bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:214557..219907+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCAAAGATCCGCGAGCGCATCGCCTACCTGGAGGCACAGGAGAAAGC
CGCCGAAGAAAAGAGGGAAAGGAGGAACCAGCTCATGCGCAGCGACCTCA
ACACGCAGATGGCAAAGATCCGCGAGCGCATCGCCTACCTGGAGGCACAG
GAGAAAGCCGCCGAAGAAAAGAGGGAAAGGAGGAACCAGCTCATGCGCAG
CGACCTCAACACGCAGGTGGCGTACAACGCCGACCGTCGTCGACAGCTGT
GGGAACAGACCGCTCGGGACGACCTAAAAGAGCTCAATGAGCTCAGGGCG
ATCGTCAGGGCCGAGCAAGAGAAGGCGGAGGCGAAAAAGAAGGAGGCCCA
CGCGCGCGGGGCAGAGGTGGCGTACAACGCCGACCGTCGTCGACAGCTGT
GGGAACAGACCGCTCGGGACGACCTAAAAGAGCTCAATGAGCTCAGGGCG
ATCGTCAGGGCCGAGCAAGAGAAGGCGGAGGCGAAAAAGAAGGAGGCCCA
CGCGCGCGGGGCAGAGGTGCGAGACTTCAACGAGGCCAGGCGCGAGATGC
GTGTGGTGGCGGCGGAGCAGGCTCGCGAGCAGGACCTGGTGCTGCTGGAG
TACGCCATCGAGAAGGACAAGGCCGGGGAGGCGGAGGAGAAGGCGAAGAA
GGAGGAGGAGCAGAGGGTGCGAGACTTCAACGAGGCCAGGCGCGAGATGC
GTGTGGTGGCGGCGGAGCAGGCTCGCGAGCAGGACCTGGTGCTGCTGGAG
TACGCCATCGAGAAGGACAAGGCCGGGGAGGCGGAGGAGAAGGCGAAGAA
GGAGGAGGAGCAGAGGGTGCTGCGCCAGTACAACGAGTATCTCAAGGAGC
AGATGGCCAAGGAGGCCGCGGACGAGGCTCAGTACGACGAGATCAGACAG
GAGGCGGAGACTCGCATCTGGGACCAGAGGGACGCGCAGCTCAAGGCGCA
GAACGACGCTAGGGAGGCCCTCATGAAGCAGGTGCTGCGCCAGTACAACG
AGTATCTCAAGGAGCAGATGGCCAAGGAGGCCGCGGACGAGGCTCAGTAC
GACGAGATCAGACAGGAGGCGGAGACTCGCATCTGGGACCAGAGGGACGC
GCAGCTCAAGGCGCAGAACGACGCTAGGGAGGCCCTCATGAAGCAGGTGC
ACCGTGGTCGGCAGGAGCAAATCCGCCTCAAGGCGCTCCGCGATGACGAG
CAGGTTGCCACCGACTTGGAGCAGGCGAGGCTCGACAGGGAGAGTTTCCT
GGCGGAGGAAGAGCGGGAGAGGGAGAAAGAAATGCGCAAACGCCAGGTGC
ACCGTGGTCGGCAGGAGCAAATCCGCCTCAAGGCGCTCCGCGATGACGAG
CAGGTTGCCACCGACTTGGAGCAGGCGAGGCTCGACAGGGAGAGTTTCCT
GGCGGAGGAAGAGCGGGAGAGGGAGAAAGAAATGCGCAAACGCCAGGAGC
TGCTAGACAACACCGCCAAGCTCAGGGAGCAGATGGCGGGCGCCCGTGCC
CGAGCGGAGAGGGAGCAGCAGGAAGAGTACCTTAGGGTGAAGCAGATGGA
GGCGTACGAGAGACGGAGCTGCTAGACAACACCGCCAAGCTCAGGGAGCA
GATGGCGGGCGCCCGTGCCCGAGCGGAGAGGGAGCAGCAGGAAGAGTACC
TTAGGGTGAAGCAGATGGAGGCGTACGAGAGACGGCACAGGGAGCGCCTG
GAGAAGCAGGCGGGTGTGGTCATCACGCACCACCCCCTGAAGCACACGCA
GTGGTATACGTGAGCACAGGGAGCGCCTGGAGAAGCAGGCGGGTGTGGTC
ATCACGCACCACCCCCTGAAGCACACGCAGTGGTATACGTGA
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