mRNA_E-siliculosus-1a_M_contig96.17550.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig96.17550.1
Unique NamemRNA_E-siliculosus-1a_M_contig96.17550.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17550.1 vs. uniprot
Match: A0A6H5L5V8_9PHAE (MsrB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5V8_9PHAE)

HSP 1 Score: 462 bits (1190), Expect = 3.270e-164
Identity = 219/227 (96.48%), Postives = 223/227 (98.24%), Query Frame = 1 
Query:  118 MRPSTQWAAAIALLRSASAFVPTSGPVGAMSRVGSTTSAAHRNVHRSSALNMQFWKPPATSKHTRLAKEPALDKCKPDAEWKEQLNPNTYQVLRGKATEPAGVRKASGGFDDVFDKGTYVCAAGCRTPLYEDSHKFDCGCGWPGFWTNIKDAVYEEKDADGRRCEILCSGCGGHLGHVFRGEGFGNPEPNERHCVNSVSLAFIPEGKTDGPDAVECTYTGRVFGGTA 798
            MRPSTQWAAAIAL+RSASAFVPTSGPV A+ RVGSTTSAAHR+VHRSSALNMQFWKPPATSKHTRLAKEPALDKCKPDAEWKEQL PNTYQVLRGKATEPAGVRKASGGFDDVFDKGTYVCA GCRTPLYEDSHKFDCGCGWPGFWTNI+DAVYEEKDADGRRCEILCSGCGGHLGHVFRGEGFGNPEPNERHCVNSVSLAFIPEGKTDGPDAVECTYTGRVFGGTA
Sbjct:    1 MRPSTQWAAAIALVRSASAFVPTSGPVAALYRVGSTTSAAHRSVHRSSALNMQFWKPPATSKHTRLAKEPALDKCKPDAEWKEQLKPNTYQVLRGKATEPAGVRKASGGFDDVFDKGTYVCA-GCRTPLYEDSHKFDCGCGWPGFWTNIQDAVYEEKDADGRRCEILCSGCGGHLGHVFRGEGFGNPEPNERHCVNSVSLAFIPEGKTDGPDAVECTYTGRVFGGTA 226
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17550.1 vs. uniprot
Match: A0A836C9K1_9STRA (Mss4-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9K1_9STRA)

HSP 1 Score: 266 bits (681), Expect = 8.290e-87
Identity = 135/217 (62.21%), Postives = 156/217 (71.89%), Query Frame = 1 
Query:  142 AAIALLRSASAFVPTSGPVGAMSRVGSTTSAAHRNVHRSSALNMQFWKPPATSKHTRLAKEPALDKCKPDAEWKEQLNPNTYQVLRGKATEPAGVRKASGGFDDVFDKGTYVCAAGCRTPLYEDSHKFDCGCGWPGFWTNIKDAVYEEKDADGRRCEILCSGCGGHLGHVFRGEGFGNPEPNERHCVNSVSLAFIPEGKTDGPDAVE-CTYTGRVFG 789
            AA++ +  A AFVP S    A++R   +  A  R++ RS+ + MQFWK P     T LAKEP LDK K DAE+K  ++P  Y VLR KATEP  V  A GGFDD  + GTYVC   C TPLY+ SHKFDCGCGWPGFWTNIKDAVYEE+D DG R EILCS CGGHLGHVFRGEGF NP PNERHCVNSVS+ FIP GK  GP+ V+ CTY+G V+G
Sbjct:   11 AALSGVSGALAFVPASSL--AITRSSGSQLATRRSIQRST-VRMQFWKSPGPDPSTNLAKEPPLDKMKSDAEYKATMDPVAYSVLRQKATEPRSVTVARGGFDDHTEDGTYVCGC-CGTPLYDSSHKFDCGCGWPGFWTNIKDAVYEERDKDGFRAEILCSSCGGHLGHVFRGEGFSNPPPNERHCVNSVSIGFIPRGK--GPEDVQKCTYSGPVYG 221
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17550.1 vs. uniprot
Match: W7U3G1_9STRA (Peptide methionine sulfoxide reductase b5 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3G1_9STRA)

HSP 1 Score: 232 bits (592), Expect = 6.820e-73
Identity = 121/214 (56.54%), Postives = 142/214 (66.36%), Query Frame = 1 
Query:  157 LRSASAFVPTSGP---VGAMSRVGSTTSAAHRNVHRSSALNMQFWKPPATSKHTRLAKEPALDKCKPDAEWKEQLNPNTYQVLRGKATEPAGVRKASGGFDDVFDKGTYVCAAGCRTPLYEDSHKFDCGCGWPGFWTNIKDAVYEEKDADGRRCEILCSGCGGHLGHVFRGEGFGNPEPNERHCVNSVSLAFIPEGKTDGPDAVE-CTYTGRVF 786
            +R AS FV +  P       S   S   A  R+    S L  + +   A    T LA +PAL K K + EWK+ L+P  ++VLR KATEP  V  A GG+DD   KGTYVC  GC+TPLY  + KFDCGCGWPGFWTNIKDAVYE++DADG RCEILCS C GHLGHVFR EGFGNP P+ERHCVNSVS+ F+PEG     DAV+ CTY G V+
Sbjct:   43 IRGASGFVSSGAPKKLFWTRSASFSAVGARSRSTTVPSMLFSRMFATQAQDPATNLAAKPALTKVKTEEEWKQILSPTAFKVLRRKATEPRKVTVAKGGWDDHNAKGTYVCT-GCKTPLYTSAMKFDCGCGWPGFWTNIKDAVYEQRDADGFRCEILCSECDGHLGHVFRNEGFGNPPPDERHCVNSVSVGFVPEGT----DAVQPCTYEGPVY 251
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17550.1 vs. uniprot
Match: A0A7S2V6B3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6B3_9STRA)

HSP 1 Score: 229 bits (585), Expect = 3.850e-72
Identity = 105/169 (62.13%), Postives = 119/169 (70.41%), Query Frame = 1 
Query:  283 KPPATSKHTRLAKEPALDKCKPDAEWKEQLNPNTYQVLRGKATEPAGVRKASGGFDDVFDKGTYVCAAGCRTPLYEDSHKFDCGCGWPGFWTNIKDAVYEEKDADGRRCEILCSGCGGHLGHVFRGEGFGNPEPNERHCVNSVSLAFIPEGKTDGPDAVECTYTGRVFG 789
            K P     T +  E    K + D +W   L P  Y+VLR K TEPAG   A+GGFDD  +KGTY+CA GC TPLY   HKFDCGCGWPGFWTNIK AVYE+ D DG RCEI+CS CG HLGHVFRGEGF NP PNERHCVNSVS+AF+PEG+ D      CTY G+V+G
Sbjct:   62 KMPDPDPSTNVVFEMDGSKSRSDDDWYNTLRPVEYKVLRMKGTEPAGQTVANGGFDDHTEKGTYICA-GCSTPLYTSEHKFDCGCGWPGFWTNIKGAVYEKLDKDGFRCEIMCSACGSHLGHVFRGEGFNNPPPNERHCVNSVSIAFLPEGEEDESKVQRCTYNGQVYG 229
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17550.1 vs. uniprot
Match: A0A813KAL6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KAL6_POLGL)

HSP 1 Score: 199 bits (506), Expect = 1.480e-60
Identity = 98/171 (57.31%), Postives = 113/171 (66.08%), Query Frame = 1 
Query:  289 PATSKHTRLAKEPALDKCKPDAEWKEQLNPNTYQVLRGKATEPAGVRKASGGFDDVFDKGTYVCA----AGCRTPLYEDSHKFDCGCGWPGFWTNIKDAVYEEKDADGRRCEILCSGCGGHLGHVFRGEGFGNPEPNERHCVNSVSLAFIPEGKTDGPDAVECTYTGRVFG 789
            P     T L    A+D   PDAEWK +L  N Y+VLR KATEP        GFDD   +G Y CA    AG   PLY    KFDCGCGWPGFWTN+KDAVYE++DADGRRCE+LCS C GH+GHVFRGE FG+P  +ERHCVNS+SL F+P     G D V  TY+G V+G
Sbjct:   38 PTQKGSTHLLPTGAVDVKLPDAEWKSKLPENVYKVLRQKATEPGHKLTFPKGFDDHKAEGVYACAGCLAAGFEVPLYTSRMKFDCGCGWPGFWTNVKDAVYEKRDADGRRCEVLCSRCDGHMGHVFRGEAFGHPT-DERHCVNSLSLVFLP---AKGGDKVAPTYSGAVYG 204
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17550.1 vs. uniprot
Match: A0A812INW2_SYMPI (MSRB5 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812INW2_SYMPI)

HSP 1 Score: 190 bits (482), Expect = 2.830e-57
Identity = 91/151 (60.26%), Postives = 108/151 (71.52%), Query Frame = 1 
Query:  349 DAEWKEQLNPNTYQVLRGKATEPAGVRKASGGFDDVFDKGTYVCA----AGCRTPLYEDSHKFDCGCGWPGFWTNIKDAVYEEKDADGRRCEILCSGCGGHLGHVFRGEGFGNPEPNERHCVNSVSLAFIPEGKTDGPDAVECTYTGRVFG 789
            + EW ++L  N ++VLR KATEP    K   GFDD  D G Y+CA    AG + PLY  S KFDCGCGWPGFWTN++ AVYE++DADGRRCEILCS C GH+GHVFRGEGFG    +ERHCVNS+SL F+P     G +AV  +YTG VFG
Sbjct:   33 EKEWSDKLRTNVFKVLRKKATEPGHRIKFPQGFDDHNDSGIYICAGCFAAGQQVPLYTSSMKFDCGCGWPGFWTNVQGAVYEQRDADGRRCEILCSKCEGHMGHVFRGEGFGYCT-DERHCVNSLSLVFLP---AKGGEAVAPSYTGPVFG 179
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17550.1 vs. uniprot
Match: A0A813HSM0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HSM0_POLGL)

HSP 1 Score: 197 bits (502), Expect = 8.660e-57
Identity = 97/171 (56.73%), Postives = 112/171 (65.50%), Query Frame = 1 
Query:  289 PATSKHTRLAKEPALDKCKPDAEWKEQLNPNTYQVLRGKATEPAGVRKASGGFDDVFDKGTYVCA----AGCRTPLYEDSHKFDCGCGWPGFWTNIKDAVYEEKDADGRRCEILCSGCGGHLGHVFRGEGFGNPEPNERHCVNSVSLAFIPEGKTDGPDAVECTYTGRVFG 789
            P     T L    A D   PDAEWK +L  N Y+VLR KATEP G      GFDD   +G Y CA    AG   PLY    KFDCGCGWPGFWTN+KDAVYE++DADG RCE+LCS C GH+GHVFRGE FG+P  +ERHCVNS+SL F+P     G + V  +YTG V+G
Sbjct:  305 PTQKGSTHLLPTGAKDVSLPDAEWKSKLPENVYKVLRQKATEPGGKLTFPKGFDDHKAEGVYACAGCLAAGFEVPLYTSRMKFDCGCGWPGFWTNVKDAVYEKRDADGSRCEVLCSRCDGHMGHVFRGEAFGHPT-DERHCVNSLSLVFLP---AKGGNMVAPSYTGAVYG 471
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17550.1 vs. uniprot
Match: A0A7S1F6B5_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1F6B5_NOCSC)

HSP 1 Score: 184 bits (467), Expect = 1.070e-54
Identity = 88/154 (57.14%), Postives = 108/154 (70.13%), Query Frame = 1 
Query:  349 DAEWKEQLNPNTYQVLRGKATEPAGVRKASGGFDDVFDKGTYVC----AAGCRTPLYEDSHKFDCGCGWPGFWTNIKDAVYEEKDADGRRCEILCSGCGGHLGHVFRGEG----FGNPEPNERHCVNSVSLAFIPEGKTDGPDAVECTYTGRVF 786
            DA W+++L+ N Y+VLR K TEP    +A  GFDDVF+ G Y+C    AAG +TP+Y    KFDCGCGWPGFWTN++  VYE +DADG RCEILCS C GH+GHVFRGEG    FG+P  +ERHCVNS+SL F    + +G   V+  Y GRVF
Sbjct:   53 DAVWRQELSENQYKVLRLKCTEPGRATQAPLGFDDVFEPGVYLCGSCLAAGVQTPVYTSKMKFDCGCGWPGFWTNVEGNVYESRDADGHRCEILCSHCDGHMGHVFRGEGMGSQFGHPT-DERHCVNSMSLVFA---RGNGSGLVKPQYKGRVF 202
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17550.1 vs. uniprot
Match: A0A7J6MIT1_PERCH (Peptide methionine sulfoxide reductase B3 n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6MIT1_PERCH)

HSP 1 Score: 181 bits (459), Expect = 6.520e-54
Identity = 92/161 (57.14%), Postives = 107/161 (66.46%), Query Frame = 1 
Query:  307 TRLAKEPALDKCKPDAEWKEQLNPNTYQVLRGKATEPAGVRKASGGFDDVFDKGTYVCAAGCRTPLYEDSHKFDCGCGWPGFWTNIKDAVYEEKDADGR-RCEILCSGCGGHLGHVFRGEGFGNPEPNERHCVNSVSLAFIPEGKTDGPDAVECTYTGRVF 786
            T L  +  LDK   D  +KE+L P  ++VLR  ATEP G+  A GG+DD F  GTY+C A C TPLY+ SHKFDCGCGWPG+WTNI DAV E  + DG  R EILCS CG HLGHVFRGEG G    +ERHCVN  SL+F P G  +       +YTGRVF
Sbjct:   14 TSLQIDGTLDKG--DDYFKERLTPTQFKVLREAATEPRGITMAKGGWDDNFADGTYLCGA-CDTPLYDSSHKFDCGCGWPGYWTNIDDAVAERMETDGSGRIEILCSKCGSHLGHVFRGEGMGYAT-DERHCVNGTSLSFKPRGSEE---VKRSSYTGRVF 167
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17550.1 vs. uniprot
Match: A0A813HA73_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HA73_POLGL)

HSP 1 Score: 196 bits (499), Expect = 8.420e-54
Identity = 94/155 (60.65%), Postives = 108/155 (69.68%), Query Frame = 1 
Query:  346 PDAEWKEQLNPNTYQVLRGKATEPAGVRKASGGFDDVFDKGTYVCA----AGCRTPLYEDSHKFDCGCGWPGFWTNIKDAVYEEKDADGRRCEILCSGCGGHLGHVFRGEGFGNPEPNERHCVNSVSLAFIPEGKTDGPDAVECTYTGRVFGGTA 798
            PDAEWK +L  N Y+VLR KATEP        GFDD   +G Y CA    AG   PLY    KFDCGCGWPGFWTN+KDAVYE++DADGRRCE+LCS C GH+GHVFRGE FG+P  +ERHCVNS+SL F+P     G D V  TY+G V+G  A
Sbjct:  509 PDAEWKSKLPENVYKVLRQKATEPGHKLTFPKGFDDHKAEGVYACAGCLAAGFEVPLYTSRMKFDCGCGWPGFWTNVKDAVYEKRDADGRRCEVLCSRCDGHMGHVFRGEAFGHPT-DERHCVNSLSLVFLP---AKGGDKVAPTYSGAVYGSGA 659
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5V8_9PHAE3.270e-16496.48MsrB domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836C9K1_9STRA8.290e-8762.21Mss4-like protein n=1 Tax=Tribonema minus TaxID=30... [more]
W7U3G1_9STRA6.820e-7356.54Peptide methionine sulfoxide reductase b5 n=2 Tax=... [more]
A0A7S2V6B3_9STRA3.850e-7262.13Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A813KAL6_POLGL1.480e-6057.31Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A812INW2_SYMPI2.830e-5760.26MSRB5 protein n=1 Tax=Symbiodinium pilosum TaxID=2... [more]
A0A813HSM0_POLGL8.660e-5756.73Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S1F6B5_NOCSC1.070e-5457.14Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7J6MIT1_PERCH6.520e-5457.14Peptide methionine sulfoxide reductase B3 n=1 Tax=... [more]
A0A813HA73_POLGL8.420e-5460.65Hypothetical protein n=2 Tax=Polarella glacialis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig96contigE-siliculosus-1a_M_contig96:42735..50652 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size801
Model size801
Exons7
Ec32 orthologEc-00_006660.1
Ec32 ortholog descriptionPeptide methionine sulphoxide reductase MrsB
Hectar predicted targeting categoryother localisation
BRITEko00000,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.O
EC1.8.4.12
EggNOG OGsCOG0229@1,KOG0856@2759
EggNOG free text desc.peptide-methionine (R)-S-oxide reductase activity
KEGG koko:K07305
Seed eggNOG ortholog2880.D7G3N8
Seed ortholog evalue3.5e-114
Seed ortholog score417.9
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936526.9154518-CDS-E-siliculosus-1a_M_contig96:42734..429001622936526.9154518-CDS-E-siliculosus-1a_M_contig96:42734..42900Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 42735..42900 -
1696251117.1957793-CDS-E-siliculosus-1a_M_contig96:42734..429001696251117.1957793-CDS-E-siliculosus-1a_M_contig96:42734..42900Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 42735..42900 -
1622936526.9304657-CDS-E-siliculosus-1a_M_contig96:44482..446331622936526.9304657-CDS-E-siliculosus-1a_M_contig96:44482..44633Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 44483..44633 -
1696251117.2108047-CDS-E-siliculosus-1a_M_contig96:44482..446331696251117.2108047-CDS-E-siliculosus-1a_M_contig96:44482..44633Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 44483..44633 -
1622936526.952794-CDS-E-siliculosus-1a_M_contig96:44969..450631622936526.952794-CDS-E-siliculosus-1a_M_contig96:44969..45063Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 44970..45063 -
1696251117.2221105-CDS-E-siliculosus-1a_M_contig96:44969..450631696251117.2221105-CDS-E-siliculosus-1a_M_contig96:44969..45063Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 44970..45063 -
1622936526.9745462-CDS-E-siliculosus-1a_M_contig96:46639..467741622936526.9745462-CDS-E-siliculosus-1a_M_contig96:46639..46774Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 46640..46774 -
1696251117.2324457-CDS-E-siliculosus-1a_M_contig96:46639..467741696251117.2324457-CDS-E-siliculosus-1a_M_contig96:46639..46774Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 46640..46774 -
1622936527.02952-CDS-E-siliculosus-1a_M_contig96:48153..482441622936527.02952-CDS-E-siliculosus-1a_M_contig96:48153..48244Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 48154..48244 -
1696251117.2419977-CDS-E-siliculosus-1a_M_contig96:48153..482441696251117.2419977-CDS-E-siliculosus-1a_M_contig96:48153..48244Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 48154..48244 -
1622936527.0471783-CDS-E-siliculosus-1a_M_contig96:49804..498851622936527.0471783-CDS-E-siliculosus-1a_M_contig96:49804..49885Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 49805..49885 -
1696251117.2521205-CDS-E-siliculosus-1a_M_contig96:49804..498851696251117.2521205-CDS-E-siliculosus-1a_M_contig96:49804..49885Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 49805..49885 -
1622936527.0611353-CDS-E-siliculosus-1a_M_contig96:50569..506521622936527.0611353-CDS-E-siliculosus-1a_M_contig96:50569..50652Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 50570..50652 -
1696251117.2625203-CDS-E-siliculosus-1a_M_contig96:50569..506521696251117.2625203-CDS-E-siliculosus-1a_M_contig96:50569..50652Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig96 50570..50652 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig96.17550.1prot_E-siliculosus-1a_M_contig96.17550.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig96 42735..50652 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig96.17550.1

>prot_E-siliculosus-1a_M_contig96.17550.1 ID=prot_E-siliculosus-1a_M_contig96.17550.1|Name=mRNA_E-siliculosus-1a_M_contig96.17550.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=267bp
MVDDILSVGTPHREAEQMELQRLLRLLSTLLCRVPSSVIMRPSTQWAAAI
ALLRSASAFVPTSGPVGAMSRVGSTTSAAHRNVHRSSALNMQFWKPPATS
KHTRLAKEPALDKCKPDAEWKEQLNPNTYQVLRGKATEPAGVRKASGGFD
DVFDKGTYVCAAGCRTPLYEDSHKFDCGCGWPGFWTNIKDAVYEEKDADG
RRCEILCSGCGGHLGHVFRGEGFGNPEPNERHCVNSVSLAFIPEGKTDGP
DAVECTYTGRVFGGTA*
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mRNA from alignment at E-siliculosus-1a_M_contig96:42735..50652-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig96.17550.1 ID=mRNA_E-siliculosus-1a_M_contig96.17550.1|Name=mRNA_E-siliculosus-1a_M_contig96.17550.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7918bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:42735..50652- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGTGGACGACATCCTCTCTGTTGGGACACCCCACAGAGAAGCGGAACA
AATGGAGCTCCAGCGGCTCCTGCGTTTGTTGAGGTACGGCAGTAGCGGCA
GACGCGTTGCCCCAACAGCAGAGCAAATATATAGAACCAATCCAGCCGGG
TCCTCTGTGCTGCTGTTGCAGTGGCAGAGACGCGCGCCGCCGGTTGTTGT
CCCTTGCAGGCTTTCCCTCTCAGCTACATATATTGTATGTAGGTGAGGAG
ATGGAAACACACACCCGCAGCACGCGAGACAGCAGAGACAGAGGAGGGAT
TTACATGTAGAGGCGTAGAGGTACGGGCAAGTGCGACGTCAACTCGTTGG
CTGGAACAAAGCAGAGGGTACTCCTGCTTGCCTCATAGGATACAAGTTGC
AGCAGCTACAGCAGTGCGCCACTGCAACAGCAGTACCTGTAGTCTACGAT
GCTGCACTACAGAGAATGCTTACACACACATTTGGAGTTTGAGAGAACAA
GTTGCATCGCCCTACGATGGGAACCGAATAAATTCGTCGCACGCTTACCG
ATCTGCACCCACGATAGAGTCTAAGCGTGTTGGCGCTCTCCCCGCTTGTT
GCACTTCTCTGTGGCGCCTGGCCTGCTGTGGTGTGTCGTCTGCTGTCTGC
TGTGCACGGATGCAACTCACCGCCGAGGGGTACACACGCCGTTTCTACAC
CGCAGTCCCCCCGTTGTTGCTCCTCTGTGTGGGGTGTGGTTTCTGCAACA
ACTCACCGCTCTAACAGCACCTTGCTCTGCCGGGTACCTTCCTCTGTGAT
CATGAGGCCTTCCACCCAATGGGCTGCCGCAATCGCGCTTCTTCGGAGGT
AAGCTTCCAAGCTCGCACAGGATGGTAGAGTTTGCTTGTCGGATAGAATA
ACATGATGTGCATCCAGACTGACCAGTGCTGATGTCATCGCGTTTTCCCG
CTAGGAATGTGACTGACTGCTGTCGCTGAGCTGTCAGCTGCTGCTGTCTT
GATTACACGCTGAATTGAGTTAGCCGCGACGGGTGAAATCAGCCTCACAA
TGCACTTGAGCCCGCGGGTAGGCCACAAGATATCCAAGTACACCACATCT
TTTTTTTTGTCTGTCTCTTGTTCACCGTACATCCCACACAGCAGTATGAT
ACTTGACGACGAGTCGTACATTATCTACAGATAATACCATCAGAGTGTAC
AACGTGTCCACCGACATCGACAGCAGCAGCGGTTATGGTTTGGCGGACAT
CCTGTACGATACCCACCGACCACTGCTGCCTGCGTGCAAGAGCTTTTCGT
GCTCGCGCACAAAATAGTCACATGCGTTTTTGAATCTGTTTCACGCCGGC
CTCACGTTACTCTCAGCGTGGCACCAAGCCGCGTTTAGGACCGCGTGCAT
GTGTTCCAGCGATCCATGCTGCTGTGGGGGATGCCTGACTCGAAAGAAGC
AGAGTACGAAATAACTGGGACGCGAATCGTGCCCCCGAAGCATACAAGTA
ACCTTGGACACGAATTGTTTCAGACGGGCAAAAAGCGGCAATATTTTTAT
GAACACAGGGGGGCGCAAGATGCCATGCACGCAGACAAGATATTACGAAC
TCTTCCTGCACGGAAAAGTAACACTTCTCATGCAGAGCAACAAAACAAGA
GAAAACTCTCGTAACCTAGGGTCCTAGGGGGGTTGTCCATCCCTTCGACC
ATGGAGCCCGCCGGTCAGGTACACAGTACTCGGTGGTTTTCAGGCGGATG
GCCGGGACGTGAAGATGCCGACCTTTAGCTCTATACCTGTAGACCTACCC
CTAACTGCAACCCACACGTGAACCCCCAAACCCATACGTGACAGCTAGGT
TGGCGTTGGGTGGACAGGTCGGTGAGCTGGCCTTGGTGCTAAGGTTGGTG
TCGCCGACGCATGTGCTGTAGGTTGGTGTTGCCTATGATATGTGCTAGGT
TGGTACGTGGCGTGGGTTTTTGCTCGGTTGGTGATGCTTGGAATCGGCCT
AGCTAGGTCGCTGTTGGATGGTAGACGGTCTTGGTGCAGGGTCTGTAAGG
CGGGACTATAATAACTGCTATCTCAGGTCTGGGTGCGTCAAACGCTTTCG
GGGCAAGCGGCACCGGCACGTCAACCATAGCCCCGAGTTGATCCGCAATC
AAAATACGTGGACTTGAAAGAAACGTTTTCATGCTTTCGGGCTAAAACAA
CGCCGCTGTGTAAGCCTCCAGGCAATCTCACAGACATGACATGCCTTGGC
CTTGGCCTCTATTGCCCCCCCTGTCGTCTCAATAACTCAGACAGCACACA
AGAAGCGTATCTGGTTTGCTATCGAGTCACCGGCGGCAACCAACCAACCT
CCCCCATGCATTCCGCGTCTTCCCCGGCATCCCCTTTCTTGGGGGTGCTT
TTCTTCAGCGCATCCGCATTCGTGCCTACGTCGGGACCTGTTGGTGCTAT
GTCCCGCGTTGGCTCGACCACCAGCGCCGCTCACCGTAACGTCCATCGGG
TGAGCTCGCTTAAGGCCAGGTTTTCATGGTACAATTTCCGATTTGGAATC
CGGCGGTGCTGTTGGTTTTTTTCGTTACCTCCCCAAAGAAGAAGACGGTC
TGCGGACAGCGGTTGGACAACACACGTGGGCACTCGGTGTTCGCTCCGCA
GGTGCTCGTTTGCAATCAAACCCTCGAGGCCGCATTGTATGCCCCACTGC
TGTGGGTTTCTCGAGCCGATCTTGGGAAGCTTTAGCGTAGTAAATAACAT
GCCTCGGTCTTGGCCATTTCCACATGGGATTTCCAAAATCGCGAAGTTGG
AACTCTTTATTTAAACTTTATTTACAACACGTGCGTGCATTCGCACCTTA
GCTCCCAAACTCTGCTCCGCGAAACCAACAACGGTGGAACATACAGCCTC
GAAGGTTGTGATTGCAAACAGGTCTCGTATGAGGCGAGCATCGCGTGCCA
ACGTGTTTTCTAGCCGCCTTTTTGCAGGCATTGGCTGCCTGGGGGTTGTA
CCACGCTTCCCACGGCACCTCCCGATTCCGAATCGGAGAGTTGTCAAAGA
GAACTGGCCTTAGCTGAGACCCGCCCCGGCCCTTTGCAGGCGGAACGGTG
CAGGCGGGGAGGGGGTGGTGGGAAGAACCGGACATGTTGACGTTTACCTT
GCTGTGCCTCTTGTTGTTTTAGCCATGGACGTATCTCTTTGGATTGTGCC
CGAGGAGGAAAAGGTGTGCTATTGACTTCGGAAAAATGCGGACCGACTGC
AGTTTTTAGCCCGTCACCACATGCTCTAACGTTGCAGGACGAGTCTTCGA
GCTAGGCACTTTCTTGCCAGAGCTGAGGCTGCACGGCTGACTGTGAACGG
CGTTGGCACGACCACCTAGCGCCGGGCCAGCTACAACGGCAGAACAAAGC
CCTATTTTTATCCGTTCGCCAAATCTGCGTTCCACCACTACAACTGCTGT
CCGCTACTTTACTGAAGGAACGGGACAAGCCTCCCGCTGGAGCTGTCTTG
GCTCGCTGTCGACCCGTTTACCTACAACTGCGATTGTGTTTTGTGGATGG
TTCTATGCTGGCGGCACGATCGACGAGGTTCAAAACGAAACACGAAAACC
GCCGCGCGTCTGACGAATTGCTATGGCTTCATGCCTCGCGTCTGCCTTTG
TCGCGTGGCCTGTGCGTCGTTCGCCCATTTTTGTTGCGATGGATGCTGTT
CAACGTCGAAACGACCGACCCACGCAAAACACAACAACAATGACGACCGC
AACAACTGCAACAACAATCACCACCACCACAACAACACCACGTCGATAAC
ACCGCCACCCACCAACGCCACTACAACAACAACGATGGCGGCAACGGAAA
CGACTACGACCACAACAACGAACGCCAGTCGTCAGCATTGAACATGCAGT
TCTGGAAGCCGCCGGCAACATCGAAGCACACCCGACTGGCGAAGGAGCCC
GCTCTCGACAAGTGCAAGCCAGACGCCGAGTGGAAGGAGCAACTTAATCC
CAACACTTACCAGGTATGATTTTCAAAGAGTAAACTGTTCTCTTCTCGTC
AGCGGCCTGGCAATCTAGCAGGATTTTGGCTCCCGATGCTGTCTCTGTGA
CCATAGGAAGATGACGGCGCTGATTTGAACACGCGATAACTCGACCTCAA
CTCGCGGACAGAGTGTTGTTTGGAACCCTTTTGCTTATACTTGGCGCAAG
ACGCCAAAAAAACACGAAATACGCAGGTAATCAAAGGCGTAGGGGGGTGG
GGTGTACTCATAGTCGTGCATGCCGTAATCGTTAGACCGTTGACCTCGCA
TCCCTACAAAGCCGGGACGGAGCACGCCGGGTTCTTGCCGGACCAGGCTC
TCACATCACCAAGCGCGAAGCGCCGTGAGGTATTCGGCGAGTCGCATGAA
GGGTGCGCTGCATCCTGCTAAGGGTGTTCGGCATCTTGTGCTTTCTTCCT
TGCGTACGGATGACAGCTGCGTATGACTTCATTTATTTTGTGGTGCGTTC
ACTTCCAGAGACAGTTATAAGCACTGTGTAACTGCCTCGAGGATGCTTGA
CCATTTTAACACAAACGTGGTGCGATCATCCCCCTTTCGCGGAGTGAGGT
TTCTCCACCCCGCACAACATGATCTACTCGACCACCAATATGGCTACCGC
CAAAAAAAACAAACAAACGTAAAAAACCCCCGGTAACCTGGTTGCCGAGT
TCACGAAGTGAATTGGCTTCTTTTACAACGTCGATGCCAAGCGACGAAAA
CCCAATCCCGATGGCAAACACCGAGGGGGGGGCTTGTGTTACAACGTCGT
TGCCAAGCGACGAAAAGCCAACGCCGATGGCAAACACCGGGGGGGGCGGC
TTGTTTTACAACGTCGTTGCCAAGCGACGAAAACCCAACCCCGATGGCAA
ACACCGGGGGCGTAGGGGGGGGGAATAATAGCCAGTCGGTGGGTTTCATC
CGTAGTCGTACTGTGAGGGTGTGTGAGCTGGTGGTGCTGTTTGTGATTGG
GCGGGGACAGAAGTCACCTGCTTCTGTGACCTGTCGCAGCTGAGGATGCC
TGCTGCTCACTGTGACTCGGTTCCCGAGCCGTTGAAACTTGCTTGATCGG
ATAGAGACGGATCGATCGAGAGTCCTTCATGTCGGGTGTCTCGGTCCTCC
GAACGGGCATGCCGCCGGTGAAGACCCCCGTCTTGCATACCTCCTCGCCT
TGGAGCCGTTCGTTGTTCGTTTTCTGCTGTGCCACTCTTGTTCCAAGCGT
ATAGCAGTACGTCCCACCACTGAACAATTTAGCAGTGAAGAAAGTGAACT
TAATATAAAAAATGTAAGAAACAAAAGAACAGGTACAGTACTTCGTCGGA
ATCCTACATGCGCTTAAACTCATATAGTCGATGTTGGTTACCCCGCCGAG
AAAACAAGAAATGAGCCTCGGGAAAAGGAGTCTCCTCTCTGGACATGTGC
ATGCTTCTGGGGAATGCGCTTCACAAAGTAGCGGAAACAACTCGGACTAC
GAATCTTCGCCGTGAATGACGATAGTAAGCAAGCGTTTCGCCCTCTCCTG
ATGTAAAAAATGCTCGCACCAAAAATACATCATGTATAGGTTCTTCGTGG
CAAGGCGACGGAGCCCGCGGGGGTCCGAAAAGCGAGCGGAGGCTTCGACG
ACGTGTTCGACAAGGGGACGTACGTGTGTGCGGGTGCGTGTGCTTTGTTG
GGCTTGCCTGGGGGGTTGGTCGTCTCGGTCGACCGAGAAGGTCTGTCTGC
GTCTTGACTCACGTGCTGACGTCCATGGTCCGGAGAGAGGTGGGGTGGGT
GGGTGGGGGGTACGTTTGCCCACGGACTGTAGAGGGAGGACACTCAACTT
TCATCCTCGACGGGACCCCCTATACTACTCCAATATAACACAAAACCGGA
TTAAGATTTACAACAAAGGCAAGCGGACGGGGGGGCGAGTGGGGTTCACA
GGACGTTATAAAATCCAGCTCCGTGTGCCGTCTTGGTCTGATCTGCGCGT
GTGTGTGTACGATACGAAGCAGGCTGCCGGACTCCTCTGTACGAGGACAG
CCACAAGTTTGACTGCGGGTGCGGCTGGCCGGGCTTTTGGACAAACATCA
AGGACGCTGTTTACGAAGAGAAGGACGCAGACGGAAGGCGGTGCGAGATC
CTCTGCTCCGGCTGCGGAGGGTGAGCGTCGTTGGTGTTACTGCTGTCTCT
GCTGCTGGTGACGTTGTGGTGCACGCGAGATACGTTTTGCGCGGGAGGGG
CGTTTTGTTAGCAGACGGTTGGGATCGAAGGCGAGGGAATCGTCCTCCAG
ATCATGCTCGACCCTGAGATGTAGACCCTCCTACATAACTTTTCTAGAAC
GAGCGCAAAGTGCGCGTGAAGCATGACATCGGTACGCTGATCTCTGGTGC
GAGTCAGTCGCTTAACCCCTTTGGCCCTAGGTTCCGTTTCGGCGTCGATT
TTTTTTTCCACCGCCGAAATAAAAAGAGACAGAAATGCAGCAAACGAGAG
TAGTGTACTTCTGTAGACGCAAGCTACATGCGGGCAGGGTGGTGGCCACA
GACAGAATCATCGGAGGGGTGATGGGCGGTCACGCTGCGGCCGGTAGGGC
AGGTGACCTTTGTAGACCTCGAAATGATCAGTCGTCTGGCTGCCTCAACT
ACTCTGTTTTCAGTATACACCGATAATGATCAATCAAATGACCAGTGAAG
GACCATAGCTGGTATTTGTACTCCTGTACTTCTCTGTCCCCCCCCTCGTA
TGAGCCCTGCCGGCTCACTAGAGCTCCTGTTTTTTCCCACAAGCACCCCA
GCACACCAGCACACACCTACTGTAGATAGGTCTCGGGAAGCGGGCCAAAA
TACGCGCAATGCGCAAAACACGAATGCCAAACTTGATCTCTCTATATTTT
ATTTGACAGCGACACACATCACAGCACCACGCATACCCTCGCCCGAACCT
AGACAGCCACTGATCCAAAGAGCGGAGGGCTCCAACAACGCGGGTATTTC
AACCCCAGCCGGAACCAGGATGTCGCGGTATGCTACATCCGTCTTTTCAC
AATCGTACATTCATTCCAAAGATCCAGCAGTCATTGTGTCAGCTGCTACA
CTACACAACAGCAGCTGTGTGGACGAGTCACACAAACTAGCTCAGACGAC
ATGTACATACACATCATAGCTCCACACATTCCCTCGCCCGAACCTTCCAC
GTAGATTGGTATTACCCGCTGGGACTGACGACTTTTCAGTGGTCAGCCCG
TTAGCGCGGCCGATGCGATGACTAAAGACACCCGTATAGAATTCCCAACA
CCGGGCGTGGAGGACTACAAAGGGCGCGAACTCCACGGCTTGCCACCTCA
CCAGCATTTGCCAATGATCAATCAATGATCAGTACACCTGTAGGCCCTAA
AGGGTTAAGCGTTGGTCAGAGCGGCGCGCGAATAGATGCCCACGTGCATA
CCTTGAGTCGGCCGCCCTTTGGTGGTTGCTTCCAGAAACTCCTAGGTAGA
AATGCTGGGGTGGTGAAGGGATCACAGCCGCCCAGACTCCCAATGCCCCA
TCCGGGAAAAACGGGAGGGAGGTACATGTGTGAATGGACGGGCCGAGGCG
AGTCGCCTACGGATACCGGGTTGGTCTGAATGATGTCGTGTGTGCATGTT
GAATACTTGAAACCCGTGTCCGTTGTCTGCCTTCTGTTTCACTCAATTCA
ATGCAATCATCACGCGGCGTTCCCTTTTTATTCCCGCTTTTTTTCACTTA
AGGCACTTGGGGCACGTTTTCCGTGGAGAGGGGTTCGGCAACCCGGAACC
AAACGAGCGGCACTGCGTGAACTCGGTCTCGCTGGCTTTCATCCCGGAAG
GCAAAACGGACGGCCCCGACGCTGTGGAGTGCACCTATACGGGACGGGTT
TTCGGCGGGACTGCATGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:42735..50652-

>mRNA_E-siliculosus-1a_M_contig96.17550.1 ID=mRNA_E-siliculosus-1a_M_contig96.17550.1|Name=mRNA_E-siliculosus-1a_M_contig96.17550.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1602bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:42735..50652- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGTGGACGACATCCTCTCTGTTGGGACACCCCACAGAGAAGCGGAACA
AATGGAGCTCCAGCGGCTCCTGCGTTTGTTGAGATGGTGGACGACATCCT
CTCTGTTGGGACACCCCACAGAGAAGCGGAACAAATGGAGCTCCAGCGGC
TCCTGCGTTTGTTGAGCACCTTGCTCTGCCGGGTACCTTCCTCTGTGATC
ATGAGGCCTTCCACCCAATGGGCTGCCGCAATCGCGCTTCTTCGGAGCAC
CTTGCTCTGCCGGGTACCTTCCTCTGTGATCATGAGGCCTTCCACCCAAT
GGGCTGCCGCAATCGCGCTTCTTCGGAGCGCATCCGCATTCGTGCCTACG
TCGGGACCTGTTGGTGCTATGTCCCGCGTTGGCTCGACCACCAGCGCCGC
TCACCGTAACGTCCATCGGCGCATCCGCATTCGTGCCTACGTCGGGACCT
GTTGGTGCTATGTCCCGCGTTGGCTCGACCACCAGCGCCGCTCACCGTAA
CGTCCATCGGTCGTCAGCATTGAACATGCAGTTCTGGAAGCCGCCGGCAA
CATCGAAGCACACCCGACTGGCGAAGGAGCCCGCTCTCGACAAGTGCAAG
CCAGACGCCGAGTGGAAGGAGCAACTTAATCCCAACACTTACCAGTCGTC
AGCATTGAACATGCAGTTCTGGAAGCCGCCGGCAACATCGAAGCACACCC
GACTGGCGAAGGAGCCCGCTCTCGACAAGTGCAAGCCAGACGCCGAGTGG
AAGGAGCAACTTAATCCCAACACTTACCAGGTTCTTCGTGGCAAGGCGAC
GGAGCCCGCGGGGGTCCGAAAAGCGAGCGGAGGCTTCGACGACGTGTTCG
ACAAGGGGACGTACGTGTGTGCGGGTTCTTCGTGGCAAGGCGACGGAGCC
CGCGGGGGTCCGAAAAGCGAGCGGAGGCTTCGACGACGTGTTCGACAAGG
GGACGTACGTGTGTGCGGCAGGCTGCCGGACTCCTCTGTACGAGGACAGC
CACAAGTTTGACTGCGGGTGCGGCTGGCCGGGCTTTTGGACAAACATCAA
GGACGCTGTTTACGAAGAGAAGGACGCAGACGGAAGGCGGTGCGAGATCC
TCTGCTCCGGCTGCGGAGGCAGGCTGCCGGACTCCTCTGTACGAGGACAG
CCACAAGTTTGACTGCGGGTGCGGCTGGCCGGGCTTTTGGACAAACATCA
AGGACGCTGTTTACGAAGAGAAGGACGCAGACGGAAGGCGGTGCGAGATC
CTCTGCTCCGGCTGCGGAGGGCACTTGGGGCACGTTTTCCGTGGAGAGGG
GTTCGGCAACCCGGAACCAAACGAGCGGCACTGCGTGAACTCGGTCTCGC
TGGCTTTCATCCCGGAAGGCAAAACGGACGGCCCCGACGCTGTGGAGTGC
ACCTATACGGGACGGGTTTTCGGCGGGACTGCATGAGCACTTGGGGCACG
TTTTCCGTGGAGAGGGGTTCGGCAACCCGGAACCAAACGAGCGGCACTGC
GTGAACTCGGTCTCGCTGGCTTTCATCCCGGAAGGCAAAACGGACGGCCC
CGACGCTGTGGAGTGCACCTATACGGGACGGGTTTTCGGCGGGACTGCAT
GA
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