mRNA_E-siliculosus-1a_M_contig96.17549.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17549.1 vs. uniprot
Match: D7G3N9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3N9_ECTSI) HSP 1 Score: 55.8 bits (133), Expect = 2.050e-8 Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = -2 Query: 6 MAHGGAASIASIGMIAALGHRRARVQGLRHK 98 MAH GA SIASIGMIAALGHRRARVQGLRHK Sbjct: 1 MAHSGAGSIASIGMIAALGHRRARVQGLRHK 31 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig96.17549.1 >prot_E-siliculosus-1a_M_contig96.17549.1 ID=prot_E-siliculosus-1a_M_contig96.17549.1|Name=mRNA_E-siliculosus-1a_M_contig96.17549.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=107bp LTLCRSPCTRARRWPKAAIIPIEAIEAAPPWAITSRASAPLLGGYDHSTNback to top mRNA from alignment at E-siliculosus-1a_M_contig96:29432..29754+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig96.17549.1 ID=mRNA_E-siliculosus-1a_M_contig96.17549.1|Name=mRNA_E-siliculosus-1a_M_contig96.17549.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=323bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:29432..29754+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:29432..29754+ >mRNA_E-siliculosus-1a_M_contig96.17549.1 ID=mRNA_E-siliculosus-1a_M_contig96.17549.1|Name=mRNA_E-siliculosus-1a_M_contig96.17549.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=642bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:29432..29754+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |