Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 0 |
| Cds size | 252 |
| Model size | 345 |
| Exons | 2 |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936526.3359416-UTR-E-siliculosus-1a_M_contig96:348467..348559 | 1622936526.3359416-UTR-E-siliculosus-1a_M_contig96:348467..348559 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig96 348468..348559 + |
| 1696251116.9971344-UTR-E-siliculosus-1a_M_contig96:348467..348559 | 1696251116.9971344-UTR-E-siliculosus-1a_M_contig96:348467..348559 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig96 348468..348559 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936526.3537812-CDS-E-siliculosus-1a_M_contig96:348559..348767 | 1622936526.3537812-CDS-E-siliculosus-1a_M_contig96:348559..348767 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig96 348560..348767 + |
| 1696251117.0142753-CDS-E-siliculosus-1a_M_contig96:348559..348767 | 1696251117.0142753-CDS-E-siliculosus-1a_M_contig96:348559..348767 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig96 348560..348767 + |
| 1622936526.3719814-CDS-E-siliculosus-1a_M_contig96:348935..348979 | 1622936526.3719814-CDS-E-siliculosus-1a_M_contig96:348935..348979 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig96 348936..348979 + |
| 1696251117.027683-CDS-E-siliculosus-1a_M_contig96:348935..348979 | 1696251117.027683-CDS-E-siliculosus-1a_M_contig96:348935..348979 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig96 348936..348979 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig96.17587.1 >prot_E-siliculosus-1a_M_contig96.17587.1 ID=prot_E-siliculosus-1a_M_contig96.17587.1|Name=mRNA_E-siliculosus-1a_M_contig96.17587.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=84bp
MRDPECYRRWPPSTPDTRMDWFDSGQREPKLRVLAPGLQLRGASCGSRPW
PRERETRGGPGARGRGRGRGLLSHRAPVGGLHLP back to topmRNA from alignment at E-siliculosus-1a_M_contig96:348468..348979+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig96.17587.1 ID=mRNA_E-siliculosus-1a_M_contig96.17587.1|Name=mRNA_E-siliculosus-1a_M_contig96.17587.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=512bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:348468..348979+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GACTACCCATTCGAGATAAGACCACAGCAGTTCCGATGGTCGTCCAACAT
GTTTCTGGAGTGCAATGATATTGCCACCTTTGATGCCCGCTCATGCGTGA
TCCTGAATGTTATCGGCGGTGGCCCCCATCAACACCAGATACAAGAATGG
ATTGGTTTGATTCGGGACAACGAGAACCGAAACTGAGAGTCTTGGCGCCG
GGCTTGCAGCTGCGCGGAGCTAGCTGCGGTAGCCGCCCCTGGCCGAGAGA
GAGAGAGACACGGGGGGGCCCGGGGGCGAGAGGGAGAGGGAGAGGAAGAG
GTACAGCTATACGCAGACAGACATTCAGATAGCAGGGGTGCGCTCCCAAA
TGAAAAAAGCTTCGCGGTGATCGTCTCCTGTTGTATATAGATGAAAACGA
AACGGAGAATAACAGCTGACTGCACCGTATGTATTGTATTGACACCCCCC
CTATTATCTGCTCAACAGGTCTTTTGAGCCACCGAGCCCCCGTGGGTGGA
CTGCATTTACCG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:348468..348979+ >mRNA_E-siliculosus-1a_M_contig96.17587.1 ID=mRNA_E-siliculosus-1a_M_contig96.17587.1|Name=mRNA_E-siliculosus-1a_M_contig96.17587.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=504bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:348468..348979+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCGTGATCCTGAATGTTATCGGCGGTGGCCCCCATCAACACCAGATAC
AAGAATGGATTGGTTTGATTCGGGACAACGAGAACCGAAACTGAGAGTCT
TGGCGCCGGGCTTGCAGCTGCGCGGAGCTAGCTGCGGTAGCCGCCCCTGG
CCGAGAGAGAGAGAGACACGGGGGGGCCCGGGGGCGAGAGGGAGAGGGAG
AGGAAGAGATGCGTGATCCTGAATGTTATCGGCGGTGGCCCCCATCAACA
CCAGATACAAGAATGGATTGGTTTGATTCGGGACAACGAGAACCGAAACT
GAGAGTCTTGGCGCCGGGCTTGCAGCTGCGCGGAGCTAGCTGCGGTAGCC
GCCCCTGGCCGAGAGAGAGAGAGACACGGGGGGGCCCGGGGGCGAGAGGG
AGAGGGAGAGGAAGAGGTCTTTTGAGCCACCGAGCCCCCGTGGGTGGACT
GCATTTACCGGTCTTTTGAGCCACCGAGCCCCCGTGGGTGGACTGCATTT
ACCG back to top
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