Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 0 |
| Cds size | 207 |
| Model size | 251 |
| Exons | 2 |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936525.4978075-UTR-E-siliculosus-1a_M_contig953:3976..4019 | 1622936525.4978075-UTR-E-siliculosus-1a_M_contig953:3976..4019 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig953 3977..4019 - |
| 1696251116.830967-UTR-E-siliculosus-1a_M_contig953:3976..4019 | 1696251116.830967-UTR-E-siliculosus-1a_M_contig953:3976..4019 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig953 3977..4019 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig953.17546.1 >prot_E-siliculosus-1a_M_contig953.17546.1 ID=prot_E-siliculosus-1a_M_contig953.17546.1|Name=mRNA_E-siliculosus-1a_M_contig953.17546.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=69bp
MFLSPGTQTHPNKPAILRAADTLIKVKGRSAVEIKSEWKGEITCIVRRAI
TRYKHFAKEAQKGETGSIP back to topmRNA from alignment at E-siliculosus-1a_M_contig953:3126..4019- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig953.17546.1 ID=mRNA_E-siliculosus-1a_M_contig953.17546.1|Name=mRNA_E-siliculosus-1a_M_contig953.17546.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=894bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig953:3126..4019- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TGTGTCCTGACTGCATGGGATAGGTGCACGGGGCCTGATCACTATGTTTT
TGTCACCGGGCACTCAGACACACCCAAACAAACCGGTAAGAGACGTTTAG
CGTTGCATTTGTTTGTGCAGGGGTCGTCGGTGCTCGCCGTCATGAATTTT
TCCTCGAATGCAAAGTCACGAAGCCGTTGTGTGCAGGATTCGCTTTTTTT
CCGGACATCGGGGAGATTTTCCTTTAATATGCTAGCTAGTCAACGTCAGT
GTTGTTGTGGTCGTGTCGTCGACGAGTTCGCTTGTGATCATAGCAACCAC
GCAGGGAACACGTAGCTATACGGGTCACATATGCGGCGGATCGGCCTTCT
ACCGGCCAGGCTTCAGAAGGCCTGAGCTTTTAAACACTCGCCCTGACAAT
AGACCACGGGGACGACTTTGTATTTTCATGAGATTCTTCCTGTCGCTGGG
ATTTTCTGCTGCATAGAACAATGCTCTGTACTCGGTCTCGACGTGAACAC
GGTAACAGTCCGCCCAACGTGTGTGAGGTCCGACCAGGCTGGTGTAACCG
CGTCAGTAACCTGGTATCGAGGGTGTTGCGCAGGTATACGAGACACGCCA
CCAGACAGACGCCTGAGATAATTTGTCTGTCCATTTAATCCCCCCACCCC
TCCCGATGTACGTGTGATATGGAAAATCCATCCCAACCAAGGGAGATTTA
TTTTTTTGTTCACGAACCCTCCCTCGTAGGCAATCTTGCGAGCCGCGGAC
ACGCTCATTAAGGTGAAGGGCCGGAGCGCGGTTGAAATAAAATCCGAGTG
GAAAGGAGAGATTACTTGTATCGTGCGGCGAGCGATTACTCGTTACAAGC
ACTTTGCCAAGGAGGCCCAAAAGGGCGAAACAGGAAGTATTCCA back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig953:3126..4019- >mRNA_E-siliculosus-1a_M_contig953.17546.1 ID=mRNA_E-siliculosus-1a_M_contig953.17546.1|Name=mRNA_E-siliculosus-1a_M_contig953.17546.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=414bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig953:3126..4019- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTTTTTGTCACCGGGCACTCAGACACACCCAAACAAACCGATGTTTTT
GTCACCGGGCACTCAGACACACCCAAACAAACCGGCAATCTTGCGAGCCG
CGGACACGCTCATTAAGGTGAAGGGCCGGAGCGCGGTTGAAATAAAATCC
GAGTGGAAAGGAGAGATTACTTGTATCGTGCGGCGAGCGATTACTCGTTA
CAAGCACTTTGCCAAGGAGGCCCAAAAGGGCGAAACAGGAAGTATTCCAG
CAATCTTGCGAGCCGCGGACACGCTCATTAAGGTGAAGGGCCGGAGCGCG
GTTGAAATAAAATCCGAGTGGAAAGGAGAGATTACTTGTATCGTGCGGCG
AGCGATTACTCGTTACAAGCACTTTGCCAAGGAGGCCCAAAAGGGCGAAA
CAGGAAGTATTCCA back to top
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