mRNA_E-siliculosus-1a_M_contig95.17543.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17543.1
Unique NamemRNA_E-siliculosus-1a_M_contig95.17543.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17543.1 vs. uniprot
Match: D7G1Y7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Y7_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 6.170e-70
Identity = 159/251 (63.35%), Postives = 162/251 (64.54%), Query Frame = 1
Query:   82 QQWPRGPRNELHKAAHFGSADRTRALLSSGAFDVNQGDPKGFTPLMLASMEGHSHIVKILLDNGANSSIVASDRGTALGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFVVTSPSGNRFVPLDMAAQYGHAGVVRELLREHGIRGCAGVTGGVRALRGAAKEQHVGVMAVLAEAGVADAGGQALVVAAEFGR 834
            +QWPRGPRNELH+AAHFGSADRTRALLSSGA DVNQGDP GFTPLMLASMEG SHIVKILLDNGANSS       TALGVXXXXXXXXXXXXXXXXXX                                                                      V         VPLDMAAQYGHAGVVRELLREHGIRGCAGVTGGVRALRGAAKEQHVGVMA+LAEAGVADAGGQALVVAAEFGR
Sbjct:    3 EQWPRGPRNELHEAAHFGSADRTRALLSSGAVDVNQGDPAGFTPLMLASMEGQSHIVKILLDNGANSS-------TALGVXXXXXXXXXXXXXXXXXXDIAGQTSDGCTPRRRRRGPPGGREGRESPDRGGREPQQPHLGRVDADVQRGVQGPHGSRPDPDSREGEPAVRRHEPVRVPVPLDMAAQYGHAGVVRELLREHGIRGCAGVTGGVRALRGAAKEQHVGVMAMLAEAGVADAGGQALVVAAEFGR 246          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17543.1 vs. uniprot
Match: A0A6H5L3P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P8_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 1.530e-28
Identity = 62/69 (89.86%), Postives = 66/69 (95.65%), Query Frame = 1
Query:  628 MAAQYGHAGVVRELLREHGIRGCAGVTGGVRALRGAAKEQHVGVMAVLAEAGVADAGGQALVVAAEFGR 834
            MA QYGHAGVVRELLRE+GIRGCAGVTGGV ALRGAAKEQHVGVMA+LA+AGVADAGGQALV+ AEFGR
Sbjct:    1 MAVQYGHAGVVRELLRENGIRGCAGVTGGVPALRGAAKEQHVGVMAMLADAGVADAGGQALVIMAEFGR 69          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17543.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 3.250e-27
Identity = 171/251 (68.13%), Postives = 193/251 (76.89%), Query Frame = 1
Query:   82 QQWPRGPRNELHKAAHFGSADRTRALLSSGAFDVNQGDPKGFTPLMLASMEGHSHIVKILLDNGANSSIVASDRGTALGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFVVTSPSGNRFVPLDMAAQYGHAGVVRELLREHGIRGCAGVTGGVRALRGAAKEQHVGVMAVLAEAGVADAGGQALVVAAEFGR 834
            Q+  RGPRNELHKAA  GS+ RT +LL+ G  D++QGDP+G+TPLM A+ EGHS+++K+LL+ GA+   V  D       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        SGN FVPLD AA  GH  V REL++  GIRGCAG + GV AL  AA +QH+ VMA+L +AGV D G  ALV     GR
Sbjct:    5 QRLARGPRNELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTG-NALVATVFLGR 254          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17543.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 1.970e-26
Identity = 145/251 (57.77%), Postives = 173/251 (68.92%), Query Frame = 1
Query:   76 TPQQWPRGPRNELHKAAHFGSADRTRALLSS-GAFDVNQGDPKGFTPLMLASMEGHSHIVKILLDNGANSSIVASDRGTALGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFVVT-SPSGNRFVPLDMAAQYGHAGVVRELLREHGIRGCAGVTGGVRALRGAAKEQHVGVMAVLAEAGVADAGGQALVVAA 822
            T Q WPRGP+N+LH+AA+ GS +R  ALL+S  +  ++ G   G+TPLMLA+  G S +V+ILL+ GAN S+VA D  TAL             XXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       +   +PSG  FVPLD AA+YG   VVREL+++  I+GC G +GGV ALR AA  Q+V VM+VLA+AGV D G +AL+ AA
Sbjct:    7 TAQPWPRGPQNDLHRAANDGSVERVVALLASRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTG-EALITAA 256          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17543.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 3.570e-26
Identity = 149/253 (58.89%), Postives = 175/253 (69.17%), Query Frame = 1
Query:   76 TPQQWPRGPRNELHKAAHFGSADRTRALLSSGAFDVNQGDPKGFTPLMLASMEGHSHIVKILLDNGANSSIVASDRGTALGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFVVTSPSGNRFVPLDMAAQYGHAGVVRELLREHGIRGCAGVTGGVRALRGAAKEQHVGVMAVLAEAGVADAGGQALVVAAEFGR 834
            T Q WPRGP N+LHKAA+ GSADR  ALLS+G+ D+NQG+PKG+TPLMLA+ +GHS + K LL+ GAN S+                               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                +  Q+GH+ VVREL+++ G+RGC GV+ GV +LR AA EQ+V +M +L   GV D G +ALVVAAE+ R
Sbjct:   24 TSQLWPRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSLVAKSLLEKGANVSVAGDGXXXXX----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQKQHGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTG-RALVVAAEYSR 253          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17543.1 vs. uniprot
Match: D8LNF8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF8_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 3.700e-26
Identity = 126/250 (50.40%), Postives = 153/250 (61.20%), Query Frame = 1
Query:   82 QQWPRGPRNELHKAAHFGSADRTRALLSSG-AFDVNQGDPKGFTPLMLASMEGHSHIVKILLDNGANSSIVASDRGTALGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFVVTSP--SGNRFVPLDMAAQYGHAGVVRELLREHGIRGCAGVTGGVRALRGAAKEQHVGVMAVLAEAGVADAGGQALVVAA 822
            Q WPRGP+N+LH+AA+ GS +R  ALL+S  + D+NQG   G+TPLMLA+  G S +V+IL + GAN S+VA D  TAL                                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       ++T P  SG  FVPLD AA+YG   VV+EL+++  I+GC G +GGV ALR AA  Q+V VMAVLA+ GV D G +AL+ AA
Sbjct:    9 QPWPRGPQNDLHRAANDGSIERVVALLASRPSIDINQGAEYGWTPLMLAAWRGSSRVVRILPNKGANVSVVADDFHTALHFSTQDGGHPVVTKMLLKAGADFEAVTSEGETPLHLVADSGCWEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANP-LLTKPTSSGVTFVPLDTAAEYGQTEVVQELVQQVSIKGCGGASGGVDALRLAALSQNVDVMAVLADVGVMDTG-EALITAA 256          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17543.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 7.330e-25
Identity = 129/240 (53.75%), Postives = 148/240 (61.67%), Query Frame = 1
Query:   82 QQWPRGPRNELHKAAHFGSADRTRALLSSGAFDVNQGDPKGFTPLMLASMEGHSHIVKILLDNGANSSIVASDRGTALGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFVVT-SPSGNRFVPLDMAAQYGHAGVVRELLREHGIRGCAGVTGGVRALRGAAKEQHVGVMAVLAEAGVADAG 798
            ++WPRGP+NELH AA  GS  RT A+LSSG  ++NQGDP G+TPLM+AS  G++ IV+IL+  GAN  IVA    TA   XXXXXXXXXXXXXX                          XXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXX      ++  + S +RFVPLD AA  G + VVRE L + GI GC G + G  AL  AAKEQ V  MAVLA AGV D G
Sbjct:    7 EKWPRGPKNELHFAADTGSTQRTAAILSSGLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGADLEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVSRDRFVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTG 246          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17543.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 2.900e-23
Identity = 125/259 (48.26%), Postives = 151/259 (58.30%), Query Frame = 1
Query:   61 MPPARTPQQWPRGPRNELHKAAHFGSADRTRALLSSGAFDVNQGDPKGFTPLMLASMEGHSHIVKILLDNGANSSIVASDRGTALGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFVVT--SPSGNRFVPLDMAAQYGHAGVVRELLREHGIRGCAGVTGGVRALRGAAKEQHVGVMAVLAEAGVADAGGQALVVAAEFG 831
            MP    PQQ PRGP N LH AA  GS + T  +L+SGAFD++QG+  G+T LMLAS  G++ IV ++L+ GA  SI           XXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXX                                    + T   PSG  F+PLD AA+ GH  VV EL+R+ GI GC G +GGVRAL+ AA+ +++ +M +L  AGV D G  ALVVAA +G
Sbjct:    1 MPRVPRPQQRPRGPSNRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTG-LALVVAAGYG 258          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17543.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 8.030e-22
Identity = 161/237 (67.93%), Postives = 180/237 (75.95%), Query Frame = 1
Query:  127 HFGSADRTRALLSSGAFDVNQGDPKGFTPLMLASMEGHSHIVKILLDNGANSSIVASDRGTALGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFV-VTSPSGNRFVPLDMAAQYGHAGVVRELLREHGIRGCAGVTGGVRALRGAAKEQHVGVMAVLAEAGVADAGGQALVVAAEFGR 834
            + GSADR  ALLS G+ D+NQG+PKG+TPLMLA  +G S + K LL  GAN S+V          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         V +PSG  FVPLD+A Q+GH+ VVREL  + G+RGC GV+GGV +LR A  EQ V +M +L   GV D G +ALVVAAE  R
Sbjct:    8 YHGSADRVDALLSMGSVDINQGNPKGWTPLMLAVEKGLSRVTKSLLGKGANVSVVGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTG-RALVVAAENSR 243          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17543.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 1.340e-20
Identity = 168/258 (65.12%), Postives = 186/258 (72.09%), Query Frame = 1
Query:   61 MPPARTPQQWPRGPRNELHKAAHFGSADRTRALLSS-GAFDVNQGDPKGFTPLMLASMEGHSHIVKILLDNGANSSIVASDRGTALGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRF--VVTSPSGNRFVPLDMAAQYGHAGVVRELLREHGIRGCAGVTGGVRALRGAAKEQHVGVMAVLAEAGVADAGGQALVVAAE 825
            MPP    Q WPRGP NELH AA  GSA+R  ALLSS    DVNQGD  G TPLMLA+  GH  +V+ILL++GAN SI+      AL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        V+ S  G  F+PLD+A     + VVRELL+  GI  C G + GV AL  A   +HVG++A+LA AGV D G      AA+
Sbjct:    1 MPPPPPTQGWPRGPMNELHLAAMDGSAERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIMDDVGSDALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLGNVLPSTGGVCFLPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQ 258          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1Y7_ECTSI6.170e-7063.35EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5L3P8_9PHAE1.530e-2889.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL76_ECTSI3.250e-2768.13EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JL33_9PHAE1.970e-2657.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1U9_ECTSI3.570e-2658.89EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LNF8_ECTSI3.700e-2650.40EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1I8_ECTSI7.330e-2553.75EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KJA9_9PHAE2.900e-2348.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K037_9PHAE8.030e-2267.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FY91_ECTSI1.340e-2065.12EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:665240..666700 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size834
Model size835
Exons2
Ec32 orthologEc-07_003660.1
Ec32 ortholog descriptionEsV-1-199
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.G
EggNOG OGsCOG0666@1,KOG4177@2759
EggNOG free text desc.response to abiotic stimulus
Seed eggNOG ortholog2880.D7G1Y7
Seed ortholog evalue2e-56
Seed ortholog score226.1
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936525.358151-CDS-E-siliculosus-1a_M_contig95:665239..6660141622936525.358151-CDS-E-siliculosus-1a_M_contig95:665239..666014Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 665240..666014 -
1696251116.7739391-CDS-E-siliculosus-1a_M_contig95:665239..6660141696251116.7739391-CDS-E-siliculosus-1a_M_contig95:665239..666014Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 665240..666014 -
1622936525.3742278-CDS-E-siliculosus-1a_M_contig95:666641..6667001622936525.3742278-CDS-E-siliculosus-1a_M_contig95:666641..666700Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 666642..666700 -
1696251116.7891378-CDS-E-siliculosus-1a_M_contig95:666641..6667001696251116.7891378-CDS-E-siliculosus-1a_M_contig95:666641..666700Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 666642..666700 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17543.1prot_E-siliculosus-1a_M_contig95.17543.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig95 665240..666700 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig95.17543.1

>prot_E-siliculosus-1a_M_contig95.17543.1 ID=prot_E-siliculosus-1a_M_contig95.17543.1|Name=mRNA_E-siliculosus-1a_M_contig95.17543.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=278bp
DIFLLLLDRCQLPCNHTRFSMPPARTPQQWPRGPRNELHKAAHFGSADRT
RALLSSGAFDVNQGDPKGFTPLMLASMEGHSHIVKILLDNGANSSIVASD
RGTALGVAAQNGHAEVAKILVDAGADIEGQTSDGCTPLHVAAYEGHPGVM
RVLIEAGANPNSRISDGSTPMYSAAFKGHTEAVRILIRAKANPRFVVTSP
SGNRFVPLDMAAQYGHAGVVRELLREHGIRGCAGVTGGVRALRGAAKEQH
VGVMAVLAEAGVADAGGQALVVAAEFGR
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mRNA from alignment at E-siliculosus-1a_M_contig95:665240..666700-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig95.17543.1 ID=mRNA_E-siliculosus-1a_M_contig95.17543.1|Name=mRNA_E-siliculosus-1a_M_contig95.17543.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1461bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:665240..666700- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GACATCTTCCTGCTCTTGCTTGACCGGTGCCAACTTCCTTGCAACCACAC TAGATTCAGGTGCATCTGCTTGGGGTTTTACGTCCGTGTCTTGGAGGCTC AGCAGTTTGAACTGACCTCCCATCTCAGCCAATTTCTGCTTCAGAGTTTC GATTTCTTTCTCCTTGTTCGACAACTCTTCCTGGAACTCTGTTTTGAGCG TGTCATCGGCAGGTGTGATTTTTTCTTCTCTCAACACCTCCTCCCCCTTC GCTTCCTCTTTGACAGACACGTTACCCCCCCTGTCTCCTCCCTCCCACCT TCCAGTGTGGAAGTTGCCTTGCTGATCACAGTAGACGTTACCTCCTTGAG GACCTTCGTCACCCCCCCCCTCCCTGTGACCAGTATTGCTGGGGCGCCTG CATCTGCGGCGGTGGCGGTTGCTGCTGCCACTGCTGCTGCTGCAGCTGCG GCTGCTGCTGCTGCTGCTGTTGCGGCTGCTGGGGGGTGTCGGGTTTCCAC GAGGTTCGGGAAGCATTAGATGTGGAACCTTCAACACTCATATACCATAC CTCAAATGACGGCACGGGACCCCCAAAACCGCCTGTAAGGCCTAGCTCTG TCGCCTATTTAGCTCTGCGCAACCACCGTGCAGTCTCTCCTCCTGCTCCC GCCTTCCCGCCTACAACTTGTCTTGCAACCTTGCAGCATGCCTCCGGCAC GTACCCCGCAGCAATGGCCTCGAGGACCCAGAAACGAGCTGCACAAGGCG GCGCACTTTGGCTCCGCGGACCGCACGCGGGCCCTCCTCTCGAGCGGGGC TTTCGACGTCAACCAGGGCGATCCGAAAGGATTCACGCCCCTCATGCTGG CGTCCATGGAGGGACACTCTCACATCGTCAAGATCCTGCTGGACAACGGG GCCAACTCGTCGATCGTGGCCAGCGACAGGGGCACGGCCCTGGGCGTCGC GGCCCAGAACGGGCACGCGGAGGTGGCGAAAATTCTCGTCGACGCCGGCG CGGACATCGAGGGGCAGACCTCCGACGGGTGCACCCCTCTCCACGTCGCC GCCTACGAGGGCCACCCGGGGGTCATGAGAGTCCTGATCGAGGCGGGCGC GAACCCCAACAGCCGCATCTCGGACGGGTCGACGCCGATGTACAGCGCGG CGTTCAAGGGCCACACGGAAGCCGTGCGGATCCTGATCCGCGCGAAGGCG AACCCGCGGTTCGTCGTCACGAGCCCGTCCGGGAACAGGTTCGTGCCCCT GGACATGGCCGCGCAGTACGGCCACGCCGGGGTGGTTCGCGAGCTTCTCA GGGAGCACGGGATCAGGGGCTGCGCCGGGGTTACCGGCGGCGTGCGGGCC CTCCGCGGTGCCGCCAAGGAGCAGCACGTCGGGGTCATGGCCGTGCTGGC GGAGGCCGGAGTCGCCGACGCCGGGGGCCAGGCGCTGGTCGTGGCGGCGG AGTTCGGCCGC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:665240..666700-

>mRNA_E-siliculosus-1a_M_contig95.17543.1 ID=mRNA_E-siliculosus-1a_M_contig95.17543.1|Name=mRNA_E-siliculosus-1a_M_contig95.17543.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1668bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:665240..666700- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GACATCTTCCTGCTCTTGCTTGACCGGTGCCAACTTCCTTGCAACCACAC
TAGATTCAGGACATCTTCCTGCTCTTGCTTGACCGGTGCCAACTTCCTTG
CAACCACACTAGATTCAGCATGCCTCCGGCACGTACCCCGCAGCAATGGC
CTCGAGGACCCAGAAACGAGCTGCACAAGGCGGCGCACTTTGGCTCCGCG
GACCGCACGCGGGCCCTCCTCTCGAGCGGGGCTTTCGACGTCAACCAGGG
CGATCCGAAAGGATTCACGCCCCTCATGCTGGCGTCCATGGAGGGACACT
CTCACATCGTCAAGATCCTGCTGGACAACGGGGCCAACTCGTCGATCGTG
GCCAGCGACAGGGGCACGGCCCTGGGCGTCGCGGCCCAGAACGGGCACGC
GGAGGTGGCGAAAATTCTCGTCGACGCCGGCGCGGACATCGAGGGGCAGA
CCTCCGACGGGTGCACCCCTCTCCACGTCGCCGCCTACGAGGGCCACCCG
GGGGTCATGAGAGTCCTGATCGAGGCGGGCGCGAACCCCAACAGCCGCAT
CTCGGACGGGTCGACGCCGATGTACAGCGCGGCGTTCAAGGGCCACACGG
AAGCCGTGCGGATCCTGATCCGCGCGAAGGCGAACCCGCGGTTCGTCGTC
ACGAGCCCGTCCGGGAACAGGTTCGTGCCCCTGGACATGGCCGCGCAGTA
CGGCCACGCCGGGGTGGTTCGCGAGCTTCTCAGGGAGCACGGGATCAGGG
GCTGCGCCGGGGTTACCGGCGGCGTGCGGGCCCTCCGCGGTGCCGCCAAG
GAGCAGCACGTCGGGGTCATGGCCGTGCTGGCGGAGGCCGGAGTCGCCGA
CGCCGGGGGCCAGGCGCTGGTCGTGGCGGCGGAGTTCGGCCGCCATGCCT
CCGGCACGTACCCCGCAGCAATGGCCTCGAGGACCCAGAAACGAGCTGCA
CAAGGCGGCGCACTTTGGCTCCGCGGACCGCACGCGGGCCCTCCTCTCGA
GCGGGGCTTTCGACGTCAACCAGGGCGATCCGAAAGGATTCACGCCCCTC
ATGCTGGCGTCCATGGAGGGACACTCTCACATCGTCAAGATCCTGCTGGA
CAACGGGGCCAACTCGTCGATCGTGGCCAGCGACAGGGGCACGGCCCTGG
GCGTCGCGGCCCAGAACGGGCACGCGGAGGTGGCGAAAATTCTCGTCGAC
GCCGGCGCGGACATCGAGGGGCAGACCTCCGACGGGTGCACCCCTCTCCA
CGTCGCCGCCTACGAGGGCCACCCGGGGGTCATGAGAGTCCTGATCGAGG
CGGGCGCGAACCCCAACAGCCGCATCTCGGACGGGTCGACGCCGATGTAC
AGCGCGGCGTTCAAGGGCCACACGGAAGCCGTGCGGATCCTGATCCGCGC
GAAGGCGAACCCGCGGTTCGTCGTCACGAGCCCGTCCGGGAACAGGTTCG
TGCCCCTGGACATGGCCGCGCAGTACGGCCACGCCGGGGTGGTTCGCGAG
CTTCTCAGGGAGCACGGGATCAGGGGCTGCGCCGGGGTTACCGGCGGCGT
GCGGGCCCTCCGCGGTGCCGCCAAGGAGCAGCACGTCGGGGTCATGGCCG
TGCTGGCGGAGGCCGGAGTCGCCGACGCCGGGGGCCAGGCGCTGGTCGTG
GCGGCGGAGTTCGGCCGC
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