mRNA_E-siliculosus-1a_M_contig95.17531.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17531.1
Unique NamemRNA_E-siliculosus-1a_M_contig95.17531.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17531.1 vs. uniprot
Match: A0A6H5KFN7_9PHAE (Protein-S-isoprenylcysteine O-methyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN7_9PHAE)

HSP 1 Score: 513 bits (1320), Expect = 3.300e-182
Identity = 254/274 (92.70%), Postives = 259/274 (94.53%), Query Frame = 1
Query:  112 MLNSIQRLLNFDGCTNPQFSSPDGLGQVGVAGFLTGLVFGVHLSIAGCCLAINGLVLSRLLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYNSFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQLLLCNPLCFLVYVVAASSFFRRRIPYEEALLETFYPEQYPAYVRRTFIGIPFVPNRNNRGRNSXXXXXXXXXXXXXWELG 933
            MLNSIQRLLNFDGCTNPQFSS DGLGQVGVAGFLTGLVFGVHLSIAGCCL INGLVLSRLLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYNSFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRRE+SHQLVTRGVYRFLRHPSYFGWFWWSLGTQL+LCNPLCFLVYVVAASSFFRRRIPYEEALLE+FYPEQYPAYVRRTF+GIPFVPNR+NRGRNS             WELG
Sbjct:    1 MLNSIQRLLNFDGCTNPQFSSSDGLGQVGVAGFLTGLVFGVHLSIAGCCLTINGLVLSRLLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYNSFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREQSHQLVTRGVYRFLRHPSYFGWFWWSLGTQLVLCNPLCFLVYVVAASSFFRRRIPYEEALLESFYPEQYPAYVRRTFVGIPFVPNRSNRGRNSGGSSSRRS-----WELG 269          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17531.1 vs. uniprot
Match: D7G1X4_ECTSI (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X4_ECTSI)

HSP 1 Score: 395 bits (1015), Expect = 1.040e-136
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1
Query:  112 MLNSIQRLLNFDGCTNPQFSSPDGLGQVGVAGFLTGLVFGVHLSIAGCCLAINGLVLSRLLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYNSFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ 693
            MLNSIQRLLNFDGCTNPQFSSPDGLGQVGVAGFLTGLVFGVHLSIAGCCLAINGLVLSRLLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYNSFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ
Sbjct:    1 MLNSIQRLLNFDGCTNPQFSSPDGLGQVGVAGFLTGLVFGVHLSIAGCCLAINGLVLSRLLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYNSFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ 194          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17531.1 vs. uniprot
Match: A0A7S2SR19_9STRA (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR19_9STRA)

HSP 1 Score: 256 bits (655), Expect = 3.930e-81
Identity = 129/250 (51.60%), Postives = 170/250 (68.00%), Query Frame = 1
Query:  109 LMLNSIQRLLNFDGCTNPQFSSPDGLGQVGVAGFLTGLVFGVHLSIAGCCLAINGLVLSR--LLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYNSFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQLLLCNPLCFLVYVVAASSFFRRRIPYEEALLETFYPEQYPAYVRRTFIGIPFV 852
            L++N IQ +LNFDG  +PQF S  G+G++GVAGF  G++ GVH+    C LA+N  +     L QW LY   ++ FHF+EFF TA+FKP +VSY+SFV+NHS  YT A++AS AEF +E  +    K QP V   G+ L  IG +FR  AMWTA  +FNH I++     H+L+T GVYR  RHPSYFGWFWW +GTQ+LLCNP+  L+Y  AA +FF+ R+PYEEA L   + E+Y  Y +RT + IPFV
Sbjct:    5 LLVNRIQSVLNFDGWESPQFKSSAGVGRIGVAGFGLGIIVGVHV----CLLAVNPWIWRSWPLAQWGLYVTCIAVFHFTEFFTTAMFKPTVVSYDSFVINHSTAYTMAVIASAAEFWVEFLVFGHRKFQPVVFVLGLGLIAIGQFFRSAAMWTARESFNHLIVEHLAPEHRLITHGVYRIFRHPSYFGWFWWCVGTQVLLCNPIVALLYAGAAWNFFQTRVPYEEATLLRLFGEEYKLYAQRTPVAIPFV 250          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17531.1 vs. uniprot
Match: A0A1V9YAN0_9STRA (Protein-S-isoprenylcysteine O-methyltransferase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YAN0_9STRA)

HSP 1 Score: 244 bits (624), Expect = 3.210e-77
Identity = 124/233 (53.22%), Postives = 158/233 (67.81%), Query Frame = 1
Query:  163 QFSSPDGLGQVGVAGFLTGLVFGVHLSIA-GCCLAING--LVLSRLLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYNSFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQLLLCNPLCFLVYVVAASSFFRRRIPYEEALLETFYPEQYPAYVRRTFIGIPFV 852
            QF+S  GLG+V VA F  G V  VHL +     LA +      + +LQWS+Y   L+FFHFSEF  TA FKP  VSY SF+LNHS  Y  AL  SWAE+ LEA+  P  K  P  + AG+ L ++G +FRVGAMWTA SNF+H I   + + HQL+T G+Y ++RHPSYFGWF+WS+G+Q+ LCNPLC L Y  A+ SFF+ RIPYEE +L  F+P++YP Y  RT  G+PFV
Sbjct:    5 QFTSDVGLGKVAVAAFGIGFVMAVHLCLLFWVVLATDASWTYHNAILQWSVYMVCLTFFHFSEFISTAAFKPGYVSYESFLLNHSDAYQMALFTSWAEYWLEAYFFPASKFSPFFMWAGLGLIVMGQFFRVGAMWTAKSNFSHRIEIAKRKDHQLITHGLYTYIRHPSYFGWFYWSIGSQVFLCNPLCTLAYTAASWSFFKDRIPYEEEILLDFFPDEYPQYKARTISGVPFV 237          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17531.1 vs. uniprot
Match: A0A067CQM9_SAPPC (Protein-S-isoprenylcysteine O-methyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQM9_SAPPC)

HSP 1 Score: 243 bits (620), Expect = 1.290e-76
Identity = 121/238 (50.84%), Postives = 158/238 (66.39%), Query Frame = 1
Query:  163 QFSSPDGLGQVGVAGFLTGLVFGVHLSIAGCCLAINGLVLS--------RLLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYNSFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQLLLCNPLCFLVYVVAASSFFRRRIPYEEALLETFYPEQYPAYVRRTFIGIPFV 852
            QF+S  GLG+V VA F  G V  VHL     CL    ++ +          LQW++Y   L+FFHFSEF  TA FKP  VSY SF+LNHS  Y  AL  SW E+ +EA+  P+ K +P  +  G+ L ++G +FRVGAMWTA SNF+H I   + + H+L+T G+Y ++RHPSYFGWF+WS+G+Q+ LCNPLC + Y  A+ SFF+ RIPYEE +L  F+PEQYPAY  RT  G+PFV
Sbjct:    5 QFTSDVGLGKVAVAAFGIGFVMAVHL-----CLLFYVVLATDAGWTYHNATLQWAVYMVCLTFFHFSEFISTAAFKPGFVSYESFLLNHSDAYQVALFTSWVEYWVEAYFFPDAKFRPLFMWLGLLLVVMGQFFRVGAMWTAKSNFSHRIEIAKRKDHELITHGLYTYIRHPSYFGWFYWSIGSQVFLCNPLCTIAYTAASWSFFKDRIPYEEEILLDFFPEQYPAYKARTISGVPFV 237          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17531.1 vs. uniprot
Match: W7UAK7_9STRA (Protein-S-isoprenylcysteine O-methyltransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UAK7_9STRA)

HSP 1 Score: 242 bits (617), Expect = 6.160e-76
Identity = 123/252 (48.81%), Postives = 172/252 (68.25%), Query Frame = 1
Query:  109 LMLNSIQRLLNFD---GCTNPQFSSPDGLGQVGVAGFLTGLVFGVHLSIAGCCLAINGLVLSRLLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYNSFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAA-GVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQLLLCNPLCFLVYVVAASSFFRRRIPYEEALLETFYPEQYPAYVRRTFIGIPFV 852
            L ++ +Q+ L+F+      NP F +  G+G++G+AGFL G ++G HL +    L  N   L  L++WS Y  SL  FHF EF  TA++KP+ V+Y+S+++NHSKEYT A LA+WAEF LE +  P+LK   +     G+   + G   R+ AM TA  +F+H IM+ R++ HQLVT G+YRFLRHPSY GWFWW +GTQ+LLCNPLC L+Y + +  FF  RI YEE  L+TFYP++YP+Y R+T +GIPF+
Sbjct:    2 LSIDRLQKCLDFNFPAAAANPAFHTNRGVGRIGLAGFLLGGLWGAHLVLFFAALLGNDNKL-WLVRWSAYMVSLFCFHFMEFLSTALYKPESVTYDSYMINHSKEYTVAALAAWAEFWLELWFFPDLKISGSFTCLLGLLFLVGGQACRIVAMHTARGHFSHTIMETRQKDHQLVTHGIYRFLRHPSYCGWFWWVVGTQILLCNPLCALIYALVSWRFFAARIKYEEGTLKTFYPQEYPSYCRQTVVGIPFI 252          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17531.1 vs. uniprot
Match: A0A024U7K8_9STRA (Protein-S-isoprenylcysteine O-methyltransferase n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7K8_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.010e-75
Identity = 124/232 (53.45%), Postives = 154/232 (66.38%), Query Frame = 1
Query:  163 QFSSPDGLGQVGVAGFLTGLVFGVH--LSIAGCCLAINGLVLSRLLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYNSFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQLLLCNPLCFLVYVVAASSFFRRRIPYEEALLETFYPEQYPAYVRRTFIGIPFV 852
            QF+S  GLG+V VAGF  G V  +H  L +  C    + +    ++QWSLY   L+FFHFSEF  TA FKP  VSY SF+LNHS  Y  AL A   EF LE++  PE K    V   G+ L ++G  FRVGAMWTA SNF+H I   + + H LVT GVY+++RHPSYFGWF+WS+G+Q+ LCNP+C + Y  A+ SFF+ RIPYEE LL  F+P QYP Y  RTF GIPFV
Sbjct:    5 QFTSDVGLGKVAVAGFGLGFVMALHICLFVWACWWTDDWVYRHAVIQWSLYVVCLAFFHFSEFISTAAFKPGFVSYESFLLNHSDAYHLALAAGCVEFWLESYFFPERKYLHQVATIGLFLIVMGASFRVGAMWTAKSNFSHRIEVAKRKEHTLVTHGVYKYIRHPSYFGWFYWSIGSQVFLCNPVCTVAYTAASWSFFKDRIPYEEELLHEFFPTQYPPYKARTFSGIPFV 236          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17531.1 vs. uniprot
Match: A0A6G0XJW4_9STRA (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJW4_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.040e-75
Identity = 129/238 (54.20%), Postives = 156/238 (65.55%), Query Frame = 1
Query:  163 QFSSPDGLGQVGVAGFLTGLVFGVHLSIAGCCLAINGLVL--------SRLLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYNSFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQLLLCNPLCFLVYVVAASSFFRRRIPYEEALLETFYPEQYPAYVRRTFIGIPFV 852
            QF+S  GLG+V VAGF  G V   H+     CL I    L        + ++QWS+Y   L+FFHFSEF  TA FKP  VSY SF+LNHS+ Y  AL A   EF LE++  P+ K Q AV   G+ L L+G  FRVGAMWTA SNF+H I   + + H LVT GVY ++RHPSYFGWF+WS+G+Q+ LCNPLC L Y  A+ SFFR RIPYEE LL  F+PE+YP Y  RT  GIPFV
Sbjct:    5 QFTSDVGLGKVAVAGFGLGFVMAFHV-----CLYIWAYWLVDGGWEYRNAVIQWSIYIVCLTFFHFSEFISTAAFKPGFVSYESFLLNHSEAYHIALAAGCVEFWLESYFFPDGKYQHAVAGFGLFLILMGASFRVGAMWTAKSNFSHRIEVAKRKDHTLVTHGVYTYIRHPSYFGWFYWSIGSQVFLCNPLCALAYTAASWSFFRDRIPYEEELLLEFFPEEYPKYKARTISGIPFV 237          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17531.1 vs. uniprot
Match: W4FUZ1_9STRA (Protein-S-isoprenylcysteine O-methyltransferase n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FUZ1_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.080e-75
Identity = 128/239 (53.56%), Postives = 157/239 (65.69%), Query Frame = 1
Query:  163 QFSSPDGLGQVGVAGFLTGLVFGVHLSIAGCCLAINGLVLS---------RLLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYNSFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQLLLCNPLCFLVYVVAASSFFRRRIPYEEALLETFYPEQYPAYVRRTFIGIPFV 852
            QF+S  GLG+V +AGF  G V  +H+     CL I    L+          ++QWSLY   L+FFHFSEF  TA FKP  VSY SF+LNHS  Y  AL A   EF LE+   PELK    V + G+ L ++G  FRVGAMWTA SNF+H I   + + H LVT GVY+++RHPSYFGWF+WS+G+Q+ LCNPLC L Y  A+ SFF+ RIPYEE LL  F+P +YPAY  RTF GIPFV
Sbjct:    5 QFTSDVGLGKVAIAGFGLGFVMALHV-----CLFIWAYFLTDGDTWVYRNAVIQWSLYVVCLTFFHFSEFISTAAFKPGFVSYESFLLNHSDAYHMALAAGCVEFWLESHFFPELKYIHDVSSVGLFLIVLGASFRVGAMWTAKSNFSHRIEVAKRKDHTLVTHGVYKYIRHPSYFGWFYWSIGSQVFLCNPLCTLAYAAASWSFFKDRIPYEEELLLEFFPAEYPAYKARTFSGIPFV 238          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17531.1 vs. uniprot
Match: A0A7S2Y1W5_9STRA (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1W5_9STRA)

HSP 1 Score: 239 bits (611), Expect = 7.070e-75
Identity = 128/259 (49.42%), Postives = 164/259 (63.32%), Query Frame = 1
Query:  157 NPQFSSPDGLGQVGVAGFLTGLVFGVHLSIAGCCLAINGLVLSR---LLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYNSFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAG------------------------VALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQLLLCNPLCFLVYVVAASSFFRRRIPYEEALLETFYPEQYPAYVRRTFIGIPFV 852
            N  +++ +G G+ GVAGFL GL+ G HL     CL +  L+      ++ W LY  SL+ FHF EFFVT++F P  +SY++F++NHSKEYT A +ASW EF +E F  P LK     + AG                        + L L+G   R GAMWTAGSNFNH I  ++E+ HQLVT G+YR+LRHPSYFGWFWWS+G Q+LL NP+C L Y  A+  FF RRIP+EE  LE F+P+ YPAY RRT IGIPF+
Sbjct:   12 NIAYNTRNGPGRFGVAGFLIGLLLGFHL-----CLLVCNLIYDPSFPVVIWCLYFTSLAGFHFGEFFVTSIFNPWSLSYDAFIINHSKEYTVAAIASWIEFWVERFTFPGLKLAGFQLGAGXXXXXXXXEATWWMYGACILSGLGLVLVLVGQACRSGAMWTAGSNFNHVIATKKEKEHQLVTHGLYRYLRHPSYFGWFWWSIGLQVLLLNPVCTLAYAAASWRFFSRRIPFEEGQLEKFFPD-YPAYKRRTIIGIPFI 264          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17531.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFN7_9PHAE3.300e-18292.70Protein-S-isoprenylcysteine O-methyltransferase (F... [more]
D7G1X4_ECTSI1.040e-136100.00Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A7S2SR19_9STRA3.930e-8151.60Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A1V9YAN0_9STRA3.210e-7753.22Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A067CQM9_SAPPC1.290e-7650.84Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
W7UAK7_9STRA6.160e-7648.81Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A024U7K8_9STRA1.010e-7553.45Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A6G0XJW4_9STRA1.040e-7554.20Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
W4FUZ1_9STRA1.080e-7553.56Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A7S2Y1W5_9STRA7.070e-7549.42Protein-S-isoprenylcysteine O-methyltransferase n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:573772..576877 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size945
Model size947
Exons5
Ec32 orthologEc-07_003770.1
Ec32 ortholog descriptionIsoprenylcysteine carboxyl methyltransferase
Hectar predicted targeting categorysignal peptide
BRITEko00000,ko00001,ko01000,ko04030
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.O
EC2.1.1.100
EggNOG OGsCOG2020@1,KOG2628@2759
EggNOG free text desc.protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
GOsGO:0000003,GO:0001701,GO:0001889,GO:0003006,GO:0003674,GO:0003824,GO:0003880,GO:0004671,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005637,GO:0005737,GO:0005783,GO:0005789,GO:0006082,GO:0006139,GO:0006464,GO:0006479,GO:0006481,GO:0006520,GO:0006575,GO:0006605,GO:0006612,GO:0006725,GO:0006790,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0006997,GO:0006998,GO:0007163,GO:0007275,GO:0007323,GO:0008104,GO:0008134,GO:0008140,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008277,GO:0008284,GO:0008757,GO:0009116,GO:0009119,GO:0009787,GO:0009788,GO:0009790,GO:0009791,GO:0009792,GO:0009908,GO:0009966,GO:0009968,GO:0009987,GO:0010256,GO:0010340,GO:0010467,GO:0010646,GO:0010648,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016740,GO:0016741,GO:0018410,GO:0019538,GO:0019752,GO:0019866,GO:0022414,GO:0023051,GO:0023057,GO:0030010,GO:0031090,GO:0031136,GO:0031137,GO:0031139,GO:0031156,GO:0031224,GO:0031965,GO:0031967,GO:0031975,GO:0031984,GO:0032101,GO:0032104,GO:0032107,GO:0032259,GO:0032501,GO:0032502,GO:0033036,GO:0033365,GO:0034504,GO:0034613,GO:0034641,GO:0035264,GO:0036211,GO:0040007,GO:0042127,GO:0042175,GO:0042278,GO:0042886,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0043436,GO:0043687,GO:0043900,GO:0043902,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046128,GO:0046483,GO:0046498,GO:0046499,GO:0046578,GO:0046907,GO:0046999,GO:0048367,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048589,GO:0048608,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051056,GO:0051179,GO:0051186,GO:0051234,GO:0051604,GO:0051641,GO:0051649,GO:0051998,GO:0055086,GO:0060176,GO:0061008,GO:0061024,GO:0061458,GO:0065007,GO:0070727,GO:0071432,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072521,GO:0072657,GO:0080134,GO:0080135,GO:0090150,GO:0090567,GO:0097164,GO:0098827,GO:0140096,GO:1901135,GO:1901360,GO:1901419,GO:1901420,GO:1901564,GO:1901605,GO:1901657,GO:1902531,GO:1905957,GO:1905958,GO:2000241,GO:2000243
KEGG Pathwayko00900,ko01130,map00900,map01130
KEGG ReactionR04496
KEGG koko:K00587,ko:K08437
KEGG rclassRC00003,RC00460
Preferred nameICMT
Seed eggNOG ortholog2880.D7G1X4
Seed ortholog evalue2e-108
Seed ortholog score399.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17531.1prot_E-siliculosus-1a_M_contig95.17531.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig95 573772..576876 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936522.8650475-CDS-E-siliculosus-1a_M_contig95:573771..5740621622936522.8650475-CDS-E-siliculosus-1a_M_contig95:573771..574062Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 573772..574062 +
1696251115.7589197-CDS-E-siliculosus-1a_M_contig95:573771..5740621696251115.7589197-CDS-E-siliculosus-1a_M_contig95:573771..574062Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 573772..574062 +
1622936522.8818681-CDS-E-siliculosus-1a_M_contig95:574648..5747451622936522.8818681-CDS-E-siliculosus-1a_M_contig95:574648..574745Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 574649..574745 +
1696251115.7736132-CDS-E-siliculosus-1a_M_contig95:574648..5747451696251115.7736132-CDS-E-siliculosus-1a_M_contig95:574648..574745Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 574649..574745 +
1622936523.0694578-CDS-E-siliculosus-1a_M_contig95:575132..5753411622936523.0694578-CDS-E-siliculosus-1a_M_contig95:575132..575341Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 575133..575341 +
1696251115.7838464-CDS-E-siliculosus-1a_M_contig95:575132..5753411696251115.7838464-CDS-E-siliculosus-1a_M_contig95:575132..575341Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 575133..575341 +
1622936523.1194746-CDS-E-siliculosus-1a_M_contig95:575859..5759551622936523.1194746-CDS-E-siliculosus-1a_M_contig95:575859..575955Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 575860..575955 +
1696251115.7950885-CDS-E-siliculosus-1a_M_contig95:575859..5759551696251115.7950885-CDS-E-siliculosus-1a_M_contig95:575859..575955Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 575860..575955 +
1622936523.1319852-CDS-E-siliculosus-1a_M_contig95:576624..5768761622936523.1319852-CDS-E-siliculosus-1a_M_contig95:576624..576876Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 576625..576876 +
1696251115.8042188-CDS-E-siliculosus-1a_M_contig95:576624..5768761696251115.8042188-CDS-E-siliculosus-1a_M_contig95:576624..576876Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 576625..576876 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig95.17531.1

>prot_E-siliculosus-1a_M_contig95.17531.1 ID=prot_E-siliculosus-1a_M_contig95.17531.1|Name=mRNA_E-siliculosus-1a_M_contig95.17531.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=315bp
QSGCRQVPVSCAVCWLCLSPTPPEVLGQAERDIALPLMLNSIQRLLNFDG
CTNPQFSSPDGLGQVGVAGFLTGLVFGVHLSIAGCCLAINGLVLSRLLQW
SLYSCSLSFFHFSEFFVTAVFKPDIVSYNSFVLNHSKEYTGALLASWAEF
GLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRR
EESHQLVTRGVYRFLRHPSYFGWFWWSLGTQLLLCNPLCFLVYVVAASSF
FRRRIPYEEALLETFYPEQYPAYVRRTFIGIPFVPNRNNRGRNSGGGSSS
SSSSRRSWELGGGGG
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mRNA from alignment at E-siliculosus-1a_M_contig95:573772..576877+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig95.17531.1 ID=mRNA_E-siliculosus-1a_M_contig95.17531.1|Name=mRNA_E-siliculosus-1a_M_contig95.17531.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3106bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:573772..576877+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CAGTCGGGTTGCCGGCAGGTACCTGTCAGCTGTGCTGTGTGTTGGTTGTG TCTCTCGCCTACCCCGCCGGAGGTACTCGGCCAGGCAGAGAGAGATATAG CCCTCCCTCTGATGTTGAACTCTATTCAGCGGCTGCTGAACTTCGATGGC TGCACCAACCCGCAGTTCAGCAGCCCCGACGGCCTTGGGCAGGTGGGCGT AGCGGGCTTCTTGACGGGGCTCGTGTTCGGCGTGCACCTCTCCATCGCCG GCTGCTGCCTGGCCATCAACGGACTTGTTCTATCGCGCTTGGTAAGACGG AGGCGTAGAAACAGGCAGTCCATGCGCGGGAGCTCACGGAAATTGTGCTT GGATTTGAATTTCCGCACGGTGCAAATGGGTCGTCTGTTACATACTGTAC TTCGAAGGAGTATATCTTTTGCATTCAAAGCCTATTGATCGATGCTCCCC CCCCGGTTTGGTAGGCGACACATGTGCGTGGAGTTTAAATCCGTAGAGTG CCTTGTTAGACCATTGTAACTCGTTCAAATGCGCACGGAAGCTCCCGGAA GCAGCTCTTGCAAGACGTCGTCGTGCCATCAGGGACGTACAGCAGTTAGC GTCAACTATTCTCGTGAAGTGTAGCTAGTGAAGTGTGAAGCTCACACGAG CTGCATGTGTAGTCTAGTGACTGTGATGTGGAAAGCAGGCGGGAAGGCGG CGTCGACCTGTCTTTTATTGTCAAAACTCAAGGACACGAAATACAACTCA ACCCGCGATGGTTGCTCGTCGAGATGAACTGCTGCTGACCGGACCGCTCT CCTCTGAAAAAACCCTGCCGCCGCGCGCATCGATCGACACGGACGACTGG ACCGACCGGCCGCGTGCGAACGATCAGCTTCAGTGGAGCCTGTACTCTTG CTCTCTGTCCTTCTTCCACTTCTCGGAGTTCTTCGTAACCGCGGTCTTCA AGCCGGACATCGTCTCGTACAACTGTAAGAGTGTTGAAGCGTCCTCACGC GCCTTGGCTGCCATTTTGTTTTCGATTTATTCCATATTTCTGGTAGACAG CAACAACACTGCGAAAGTTGTCCTCACAACGGCGTGTTCTGGTTGCTCCA TGATTGTTCTCTGCTCATGGAGAAGATCGTCATATCTGTCAGGTTGGTGC TTCAGTGCTTGTGCTGAGCACGAACCCCCCCCCGGATTGGCCATGGGTGA TCCGTCCTGTGGGCACAATGCGGTCCGTCCTCTCGAGGACGCGTGTTCAA TGGTCTAACCGCTAACGCATGCAAGACATGAGAGTACGCCCCCTCCCCCC CCCCCCCCGGTCGCGCGAACCCAACCAACCGAAAACGTTCGCGAATTTCT TCGCGACGAAGCCTTCGTGCTGAACCACAGCAAGGAGTACACGGGGGCGC TGCTGGCGAGCTGGGCGGAGTTCGGCCTGGAGGCCTTCCTGTTGCCGGAG CTGAAGCGCCAACCGGCCGTCGTCGCCGCCGGCGTCGCGCTGGCCCTGAT CGGGCATTGGTTCCGCGTAGGGGCCATGTGGACGGCGGGCTCGAACTTCA ACCACGAGATCATGCAAAGAGTGAGGAGGAGGAGTGAGGAGAGACGAGGC TGTTTAGACCTCGCTCGAGGCCCAACAACCGCTTTGATTTTGTTTGCGGT TCTTGAGAGGTTCTGGCTGTGTTTTTCCGCTTAGTTAGGTCCACTGAGCC AGCAAGGAGGGAGGAGAAAGGCTGCTATAGACCTTGGTCGAGATGTCGGA AGGCCAACAACTGCTCTGGTGTTGTTTTTGGTATGTAAGAGGCTCGGTCC GCTTCTTAGGTCTACCTAGCCGTCTCGTTTGCCTCCCTGCGCGAAAAGAC CGGCCGTATCCAGCAACGACGGTCGGCTTTTGCTGCTAGCGTACCGCCTC TGACAGTCGTTCGTTAAACCTACCTCTGCTCCCTCCCTTCCTCCCCTGCT TGGTTTGCGAAAACGTACGCAACGCCGTTCTTTGGTGCCGCTTCTTTGGG TGCGGCGCGTGCGTGCCGGATGGCGGGGGCCCCCATGTTCGTCCCGATGG CGGGGACCCCTTGTCTTTGTTTTTTTTTGCGCCGACAGAGAGAAGAATCG CACCAGCTCGTTACACGCGGAGTGTACCGGTTCCTCCGACACCCCAGCTA TTTCGGGTGGTTCTGGTGGAGCCTGGGCACCCAGGTGAGAGAAACACACA CACAGCAGCAGCAGCAACCAGCCCTTGTTTTGTTCTGCCCAGCGGCGGCG ACTGTCGGCGAGCAGCCGTGTGGAGGGTATGGGGGGGGAGGGGTCCACGG TAGACAGACCTTTGGTGGTACATATGTGGTACTTATTCGCAGGCTAGGAG TGTTTTTTTGGGGGGCTGTGTGGTGGTGTCAGAGGACGCAGGTGCAGCGA GGGGCAGCACTGCTGTGGAGTCTATCTGCTGTCACTGCTTGCTGTAACGG CAAGACCTCGCTGTCGCGTATGCGAGTGGTGCTGCTGGTGCTGGTGCTGC TACCGGCTGCTGCAGAAGCTGGGGTCGCCAGCTGCGATCTTGCACAACAG GAACGCGTTTGTTCGGAGGCGTTGAAATCGTCCTTGAGTATGTACGCCCG CATCTCGGGTGTGCCAGTACTGTACGCGGCATCAAGAGGCGGTCGCCGAG TACCCCGTGTGATCCCTTGAACCCCGCTGTCCCCTCTCCTTGAATACCTG CGCACCTCCCCCCCCCCCCTCCGTCCTCTCGAGGACGCGTGGTCAACGGT CTAACCGCTAAGGCATGCAACACATAGAGAGTACGCCCCCCCCCCTCCCC GAGCTCCACTTTCACAATCCATCGCCCCCCCTCTTGTGTTCGATCTTGCC CAGCTTCTGCTGTGCAACCCGCTCTGCTTCCTGGTGTACGTGGTCGCCGC CAGCTCCTTCTTCCGAAGGCGCATCCCTTACGAAGAAGCCCTCCTCGAGA CTTTCTACCCGGAACAGTACCCGGCGTATGTGCGAAGAACCTTCATCGGG ATCCCCTTCGTGCCCAACCGTAACAACCGTGGCCGCAACAGCGGCGGCGG CAGCAGCAGCAGCAGCAGCAGCAGGCGTTCTTGGGAGTTGGGCGGGGGCG GAGGGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:573772..576877+

>mRNA_E-siliculosus-1a_M_contig95.17531.1 ID=mRNA_E-siliculosus-1a_M_contig95.17531.1|Name=mRNA_E-siliculosus-1a_M_contig95.17531.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1890bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:573772..576877+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CAGTCGGGTTGCCGGCAGGTACCTGTCAGCTGTGCTGTGTGTTGGTTGTG
TCTCTCGCCTACCCCGCCGGAGGTACTCGGCCAGGCAGAGAGAGATATAG
CCCTCCCTCTGATGTTGAACTCTATTCAGCGGCTGCTGAACTTCGATGGC
TGCACCAACCCGCAGTTCAGCAGCCCCGACGGCCTTGGGCAGGTGGGCGT
AGCGGGCTTCTTGACGGGGCTCGTGTTCGGCGTGCACCTCTCCATCGCCG
GCTGCTGCCTGGCCATCAACGGACTTGTTCTATCGCGCTTGCAGTCGGGT
TGCCGGCAGGTACCTGTCAGCTGTGCTGTGTGTTGGTTGTGTCTCTCGCC
TACCCCGCCGGAGGTACTCGGCCAGGCAGAGAGAGATATAGCCCTCCCTC
TGATGTTGAACTCTATTCAGCGGCTGCTGAACTTCGATGGCTGCACCAAC
CCGCAGTTCAGCAGCCCCGACGGCCTTGGGCAGGTGGGCGTAGCGGGCTT
CTTGACGGGGCTCGTGTTCGGCGTGCACCTCTCCATCGCCGGCTGCTGCC
TGGCCATCAACGGACTTGTTCTATCGCGCTTGCTTCAGTGGAGCCTGTAC
TCTTGCTCTCTGTCCTTCTTCCACTTCTCGGAGTTCTTCGTAACCGCGGT
CTTCAAGCCGGACATCGTCTCGTACAACTCTTCAGTGGAGCCTGTACTCT
TGCTCTCTGTCCTTCTTCCACTTCTCGGAGTTCTTCGTAACCGCGGTCTT
CAAGCCGGACATCGTCTCGTACAACTCCTTCGTGCTGAACCACAGCAAGG
AGTACACGGGGGCGCTGCTGGCGAGCTGGGCGGAGTTCGGCCTGGAGGCC
TTCCTGTTGCCGGAGCTGAAGCGCCAACCGGCCGTCGTCGCCGCCGGCGT
CGCGCTGGCCCTGATCGGGCATTGGTTCCGCGTAGGGGCCATGTGGACGG
CGGGCTCGAACTTCAACCACGAGATCATGCAAAGACCTTCGTGCTGAACC
ACAGCAAGGAGTACACGGGGGCGCTGCTGGCGAGCTGGGCGGAGTTCGGC
CTGGAGGCCTTCCTGTTGCCGGAGCTGAAGCGCCAACCGGCCGTCGTCGC
CGCCGGCGTCGCGCTGGCCCTGATCGGGCATTGGTTCCGCGTAGGGGCCA
TGTGGACGGCGGGCTCGAACTTCAACCACGAGATCATGCAAAGAAGAGAA
GAATCGCACCAGCTCGTTACACGCGGAGTGTACCGGTTCCTCCGACACCC
CAGCTATTTCGGGTGGTTCTGGTGGAGCCTGGGCACCCAGAGAGAAGAAT
CGCACCAGCTCGTTACACGCGGAGTGTACCGGTTCCTCCGACACCCCAGC
TATTTCGGGTGGTTCTGGTGGAGCCTGGGCACCCAGCTTCTGCTGTGCAA
CCCGCTCTGCTTCCTGGTGTACGTGGTCGCCGCCAGCTCCTTCTTCCGAA
GGCGCATCCCTTACGAAGAAGCCCTCCTCGAGACTTTCTACCCGGAACAG
TACCCGGCGTATGTGCGAAGAACCTTCATCGGGATCCCCTTCGTGCCCAA
CCGTAACAACCGTGGCCGCAACAGCGGCGGCGGCAGCAGCAGCAGCAGCA
GCAGCAGGCGTTCTTGGGAGTTGGGCGGGGGCGGAGGGCTTCTGCTGTGC
AACCCGCTCTGCTTCCTGGTGTACGTGGTCGCCGCCAGCTCCTTCTTCCG
AAGGCGCATCCCTTACGAAGAAGCCCTCCTCGAGACTTTCTACCCGGAAC
AGTACCCGGCGTATGTGCGAAGAACCTTCATCGGGATCCCCTTCGTGCCC
AACCGTAACAACCGTGGCCGCAACAGCGGCGGCGGCAGCAGCAGCAGCAG
CAGCAGCAGGCGTTCTTGGGAGTTGGGCGGGGGCGGAGGG
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