prot_E-siliculosus-1a_M_contig95.17516.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17516.1
Unique Nameprot_E-siliculosus-1a_M_contig95.17516.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length103
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match: D7G1V9_ECTSI (Dynein light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V9_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 6.650e-73
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
Query:    1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 102
            MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG
Sbjct:    1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 102          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match: A0A836CJA1_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA1_9STRA)

HSP 1 Score: 162 bits (410), Expect = 5.080e-50
Identity = 72/102 (70.59%), Postives = 84/102 (82.35%), Query Frame = 0
Query:    1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 102
            M  M  DW  MWGAKVK+P DM DD+L+DAI+T R+ LD C DFEAEGLA+AEKIK+H D +WDP WHV+IGRNFGSFVTHET  F+YFY+ DKA+MMYKAG
Sbjct:    1 MPSMGDDWRMMWGAKVKLPLDMPDDILKDAIDTSREVLDKCHDFEAEGLASAEKIKRHLDEQWDPHWHVVIGRNFGSFVTHETRMFLYFYIGDKAVMMYKAG 102          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match: A0A7S2W886_9STRA (Dynein light chain n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W886_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.280e-43
Identity = 67/102 (65.69%), Postives = 78/102 (76.47%), Query Frame = 0
Query:    1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 102
            MGE VP+W  MWGAKVK P D+ DDML+DAI T +  +    DFEAEG+  AEKIK+ FD RW P WHVIIG+NFGSFVTHET  F+YFY  DKA+M+YKAG
Sbjct:    1 MGEEVPEWQMMWGAKVKTPVDVPDDMLKDAILTSQRLIGEATDFEAEGVDVAEKIKREFDERWTPYWHVIIGKNFGSFVTHETKRFLYFYFDDKAVMIYKAG 102          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match: A0A7S1TPD3_9STRA (Dynein light chain n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPD3_9STRA)

HSP 1 Score: 145 bits (365), Expect = 3.790e-43
Identity = 63/98 (64.29%), Postives = 77/98 (78.57%), Query Frame = 0
Query:    5 VPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 102
            + +W+ MWGA+VK+P DM DDML+DA+ET R   +   DFE +GL AAE IK  FD +W P+WHV++GR FGSFVTHET CFVYFYL DKA+MMYKAG
Sbjct:    6 IQEWSTMWGARVKVPCDMGDDMLKDAVETTRSVFEEFPDFENDGLKAAEAIKLAFDEKWTPNWHVVVGRGFGSFVTHETKCFVYFYLDDKAVMMYKAG 103          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match: A0A7S1CI82_9STRA (Dynein light chain n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CI82_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.850e-38
Identity = 60/103 (58.25%), Postives = 76/103 (73.79%), Query Frame = 0
Query:    1 MGEMVP-DWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 102
            MGE  P +W  MWGAKVK P+D+ DDML DAI   R AL+   D+E+EG A  +K+KK FD +W P WH ++G NFGSFVTHE   FVYFY+ADKA++++KAG
Sbjct:    1 MGESAPVEWKHMWGAKVKWPSDLPDDMLEDAITVTRAALEGIEDWESEGDAVVDKLKKTFDEKWGPHWHAVVGTNFGSFVTHEARRFVYFYVADKAVLLFKAG 103          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match: H3GHN7_PHYRM (Dynein light chain n=21 Tax=Oomycota TaxID=4762 RepID=H3GHN7_PHYRM)

HSP 1 Score: 119 bits (299), Expect = 4.280e-33
Identity = 61/104 (58.65%), Postives = 70/104 (67.31%), Query Frame = 0
Query:    1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIE--TCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 102
            MGE  P W  MWGAKVKMP DM DD+L DAI+  T R       ++E  GLA  E+IK H D  WDP W V IGRNFGSFVTH T  FV+FY  +KA+M+YKAG
Sbjct:    1 MGE-APSWQHMWGAKVKMPCDMEDDVLEDAIKHVTSRLTKYDTEEWEKNGLAVCEEIKAHLDEAWDPHWVVCIGRNFGSFVTHVTRNFVFFYYNEKAVMIYKAG 103          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match: A0A5D6XID8_9STRA (Dynein light chain n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XID8_9STRA)

HSP 1 Score: 119 bits (299), Expect = 4.280e-33
Identity = 60/104 (57.69%), Postives = 72/104 (69.23%), Query Frame = 0
Query:    1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIE--TCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 102
            MGE  P+W  MWGAKVKMP DM DD+L DAI+  T R A     ++E +GL   E+IK H D  W+P W V IGRNFGS+VTH T  FVYFY  +KA+M+YKAG
Sbjct:    1 MGE-APNWQHMWGAKVKMPCDMEDDVLEDAIKHVTSRLAKYDTEEWEKQGLTVCEEIKAHMDELWEPHWVVCIGRNFGSYVTHVTRNFVYFYFNEKAVMVYKAG 103          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match: A0A7S2WLS4_9STRA (Dynein light chain n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLS4_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.790e-32
Identity = 55/102 (53.92%), Postives = 69/102 (67.65%), Query Frame = 0
Query:    1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 102
            MGE V +W  +WGAKVK P +M DD+L+DAI T  + L  C +FE+ G  A + IK H D +W P W   IGRNFGS V+HET  FV+FY  DKA+M+YK G
Sbjct:    3 MGEEVREWQTIWGAKVKTPVEMPDDILKDAITTVTNELAACENFESNGNLAVQNIKDHMDHKWSPHWCCFIGRNFGSKVSHETRRFVFFYHNDKAVMLYKIG 104          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match: K3WRF9_GLOUD (Dynein light chain n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRF9_GLOUD)

HSP 1 Score: 116 bits (291), Expect = 7.070e-32
Identity = 59/104 (56.73%), Postives = 71/104 (68.27%), Query Frame = 0
Query:    1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIE--TCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 102
            MGE  P W  MWGAKVKMP DM DD+L D I+  T R A     ++E +GLA  E++K H D  W+P W V IGRNFGS+VTH T  FV+FY  +KAIM+YKAG
Sbjct:    1 MGE-APSWQYMWGAKVKMPCDMEDDVLEDVIKHVTTRLAKFDTEEWEKKGLAVCEELKAHMDTLWEPHWVVCIGRNFGSYVTHVTRNFVFFYYNEKAIMVYKAG 103          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match: A0A1V9ZER7_9STRA (Dynein light chain n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZER7_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.020e-31
Identity = 56/104 (53.85%), Postives = 70/104 (67.31%), Query Frame = 0
Query:    1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDH--CADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 102
            MGE  P W  MWGA+VK P DM DD+L D I+     L+     ++E +GLA  E+I+ H D  WDP+W V IGRNFGS+VTH T  FVYFY  +KAI++YKAG
Sbjct:    1 MGE-APSWQNMWGARVKTPCDMEDDVLEDVIKYVTQRLEQFDTEEWEKQGLAVCEEIRDHLDKAWDPAWVVCIGRNFGSYVTHVTRNFVYFYYNEKAILIYKAG 103          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1V9_ECTSI6.650e-73100.00Dynein light chain n=1 Tax=Ectocarpus siliculosus ... [more]
A0A836CJA1_9STRA5.080e-5070.59Dynein light chain n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S2W886_9STRA1.280e-4365.69Dynein light chain n=1 Tax=Rhizochromulina marina ... [more]
A0A7S1TPD3_9STRA3.790e-4364.29Dynein light chain n=1 Tax=Phaeomonas parva TaxID=... [more]
A0A7S1CI82_9STRA2.850e-3858.25Dynein light chain n=1 Tax=Bicosoecida sp. CB-2014... [more]
H3GHN7_PHYRM4.280e-3358.65Dynein light chain n=21 Tax=Oomycota TaxID=4762 Re... [more]
A0A5D6XID8_9STRA4.280e-3357.69Dynein light chain n=1 Tax=Pythium brassicum TaxID... [more]
A0A7S2WLS4_9STRA1.790e-3253.92Dynein light chain n=1 Tax=Eucampia antarctica Tax... [more]
K3WRF9_GLOUD7.070e-3256.73Dynein light chain n=1 Tax=Globisporangium ultimum... [more]
A0A1V9ZER7_9STRA2.020e-3153.85Dynein light chain n=4 Tax=Saprolegniaceae TaxID=4... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 11..101
e-value: 1.2E-34
score: 131.1
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 19..100
e-value: 1.4E-27
score: 95.9
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 20..102
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10coord: 9..101
e-value: 4.0E-27
score: 96.0
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 18..101
NoneNo IPR availablePANTHERPTHR11886:SF35DYNEIN LIGHT CHAIN 2, CYTOPLASMICcoord: 20..102
NoneNo IPR availableTMHMMTMhelixcoord: 69..91
IPR019763Dynein light chain, type 1/2, conserved sitePROSITEPS01239DYNEIN_LIGHT_1coord: 68..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:466439..468289 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17516.1mRNA_E-siliculosus-1a_M_contig95.17516.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig95 466439..468289 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig95.17516.1 ID=prot_E-siliculosus-1a_M_contig95.17516.1|Name=mRNA_E-siliculosus-1a_M_contig95.17516.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=103bp
MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLA
AAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYK
AG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019763Dynein_light_1/2_CS
IPR037177DLC_sf
IPR001372Dynein_light_chain_typ-1/2