mRNA_E-siliculosus-1a_M_contig95.17514.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17514.1
Unique NamemRNA_E-siliculosus-1a_M_contig95.17514.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17514.1 vs. uniprot
Match: D7G1V7_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V7_ECTSI)

HSP 1 Score: 639 bits (1649), Expect = 2.040e-227
Identity = 405/455 (89.01%), Postives = 406/455 (89.23%), Query Frame = 1
Query:    1 MALDNSIVGESRRSENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSGPPQRSSLPAIEIDQLDHRFLEGLLQPTALNMSPERETDNXXXXXXXXXXXXXXXXXXXXXDGRYMKAAKLAALEVLSSSSTKESKRNVSHAEQRRLIEVAHSVDRACDKDGTVDENLISAAITIVSTNAAETPNDVIMAAIKLASVARDGFVEKFKQRLMETGGVHCTTTKHKPAPAPPANRNASTISQXXXXXXXXXXXXXXXKKRPLSIDAANGSAQGAVAPSHSPXXXXXXXXXXXXXFPMVXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSAIGLEPGEGDQHGYDKWAMPPVPDSMRGSFGLPRGGGGPRGSGSGVS 1365
            MALDNSIV ESRRSENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSGPPQRSSLPAIEIDQLDHRFLEGLLQPTALNMSPERETD   XXXXXXXXXXXXXXXXXXX                         RNVSHAEQRRLIEVAHSVDRACDKDGTVDENLISAAITIVSTNAAETPNDVIMAAIKLASVARDGFVEKFKQRLMETGGVHCTTTKHKPAPAPPA RNASTISQ               KKRPLSIDAANGSAQ AVAPSHSPXXXXXXXXXXXXX PM XXXXXXXXXXXXXXXXXXXXXXXXXXXAPSAIGLEPGEGDQ+GYDKWAMPPVPDSMRGSF LPRGGGGPRGSGSGVS
Sbjct:    1 MALDNSIVSESRRSENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSGPPQRSSLPAIEIDQLDHRFLEGLLQPTALNMSPERETDKTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------RNVSHAEQRRLIEVAHSVDRACDKDGTVDENLISAAITIVSTNAAETPNDVIMAAIKLASVARDGFVEKFKQRLMETGGVHCTTTKHKPAPAPPAKRNASTISQKSSAAADGSGGSG--KKRPLSIDAANGSAQDAVAPSHSPXXXXXXXXXXXXXXPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSAIGLEPGEGDQNGYDKWAMPPVPDSMRGSFCLPRGGGGPRGSGSGVS 444          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17514.1 vs. uniprot
Match: A0A7S1XJ32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ32_9STRA)

HSP 1 Score: 187 bits (476), Expect = 7.590e-53
Identity = 82/124 (66.13%), Postives = 99/124 (79.84%), Query Frame = 1
Query:   25 GESRRSENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVS 396
            G+     +RRVW++EED AIR LV +HGTRSW+ I E +  D++I GR+GKQCRERWHNHLDP+I KG WTPEEE ++ +   E+GN+WSEIAKRLPGRTDN VKN WYS MRRNVR L+REVS
Sbjct:   45 GKKETKNDRRVWTKEEDHAIRELVAKHGTRSWSVIAERIVTDFNITGRTGKQCRERWHNHLDPTINKGAWTPEEEQIMVEAHKELGNKWSEIAKRLPGRTDNHVKNHWYSFMRRNVRRLNREVS 168          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17514.1 vs. uniprot
Match: F0YL55_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL55_AURAN)

HSP 1 Score: 174 bits (441), Expect = 1.790e-49
Identity = 77/119 (64.71%), Postives = 94/119 (78.99%), Query Frame = 1
Query:   40 SENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVS 396
            S +RRVWS++ED AI+ LV R+GTRSW+ I EH+ +DY+I GR+GKQCRERWHNHLDP I K  WT +EE ++      +GN+WSEIAK LPGRTDN VKN WYS MRRNVR L+REV+
Sbjct:    3 SGDRRVWSQQEDSAIKDLVMRYGTRSWSVIAEHIVSDYNIEGRTGKQCRERWHNHLDPHINKDAWTADEERVMADAHKSLGNKWSEIAKLLPGRTDNHVKNHWYSFMRRNVRRLNREVN 121          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17514.1 vs. uniprot
Match: F0YL28_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL28_AURAN)

HSP 1 Score: 165 bits (418), Expect = 4.020e-45
Identity = 75/118 (63.56%), Postives = 92/118 (77.97%), Query Frame = 1
Query:   46 NRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIG-NRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVS 396
            +RRVW+ +ED+AIR LV ++GTRSW+ I EH+  D++I GR+GKQCRERWHNHLDP I K  WT EEE ++      +G N+WSEIAK LPGRTDN VKN WYS MRRNVR L+REV+
Sbjct:    6 DRRVWTVQEDNAIRQLVMKYGTRSWSVIAEHIVQDFNIDGRTGKQCRERWHNHLDPHINKEAWTEEEERIMADAHKTLGCNKWSEIAKLLPGRTDNHVKNHWYSFMRRNVRRLNREVN 123          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17514.1 vs. uniprot
Match: A0A6H5KLV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV5_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 1.380e-44
Identity = 153/339 (45.13%), Postives = 155/339 (45.72%), Query Frame = 1
Query:  349 YSSMRRNVRTLSREVSGPPQRSSLPAIEIDQLDHRFLEGLLQPTALNMSPERETDNXXXXXXXXXXXXXXXXXXXXXDG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYMKAAKLAALEVLSSSSTKESKRNVSHAEQRRLIEVAHSVDRACDKDGTVDENLISAAITIVSTNAAETPNDVIMAAIKLA 831
            YSSMRRNVRTLSREVSGPPQRSSLPAI+IDQLDHRFLEGLLQPTALNMSPERE D  XXXXXXXXXXXXXXXXXXXX                                                                                                                                                                                    RYMKAAKLAALEVLSSSSTKE+KRNVSHAEQRRLIEVAHSVDRAC KDGTVDENLISAAITIVSTNAAETPNDVIMAAIKLA
Sbjct:    4 YSSMRRNVRTLSREVSGPPQRSSLPAIDIDQLDHRFLEGLLQPTALNMSPEREADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDNRPERSGDRGNGYVNGFDNREGGVLKKLRRCSNRGVGXXXXXXXXXXXXXXXXXXXXXXXXXALIAKRQSKPQPAGPAKKHKGPYKAVRARKATGLDELERYMKAAKLAALEVLSSSSTKEAKRNVSHAEQRRLIEVAHSVDRACAKDGTVDENLISAAITIVSTNAAETPNDVIMAAIKLA 342          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17514.1 vs. uniprot
Match: A0A2R5FYY8_9STRA (Transcription factor MYB118 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYY8_9STRA)

HSP 1 Score: 174 bits (441), Expect = 4.270e-44
Identity = 80/128 (62.50%), Postives = 96/128 (75.00%), Query Frame = 1
Query:   40 SENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREV-SGPPQRSSL 420
            S +RR WS+ EDDAIR LVK HGT+ W+TI   L +DY I  R+GKQCRERWHNHLDP+I+K  WT EEEA++ K    +GNRWSEI+K LPGRTDN +KN WYS MRRNVR L++EV  G P  + L
Sbjct:   11 SGDRRAWSQREDDAIRTLVKEHGTKRWSTIATRLISDYRIDCRTGKQCRERWHNHLDPTIRKDPWTAEEEAIMAKAHQRLGNRWSEISKLLPGRTDNAIKNHWYSMMRRNVRRLNKEVLDGMPMSAPL 138          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17514.1 vs. uniprot
Match: A0A7S2SND5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SND5_9STRA)

HSP 1 Score: 160 bits (405), Expect = 5.070e-40
Identity = 71/116 (61.21%), Postives = 87/116 (75.00%), Query Frame = 1
Query:   46 NRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREV 393
            +RRVWS EED+AIR LV   GT+ W+ I   L   Y+I GR+GKQCRERWHNHLDP IKK  W+  EE  + +   ++GNRWSEI+K LPGRTDN +KN WYS+MRRNVR L++EV
Sbjct:   42 DRRVWSNEEDEAIRTLVGEQGTKKWSWIATELRQRYNIDGRTGKQCRERWHNHLDPEIKKCPWSESEEQALAEAHQKLGNRWSEISKLLPGRTDNAIKNHWYSTMRRNVRRLTKEV 157          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17514.1 vs. uniprot
Match: A0A7S2ST59_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST59_9STRA)

HSP 1 Score: 155 bits (391), Expect = 3.860e-39
Identity = 70/116 (60.34%), Postives = 87/116 (75.00%), Query Frame = 1
Query:   49 RRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVS 396
            RR WSR+EDDAI  LV RHGT+ WA I + L  + S V RSGKQCR RW NHLDP+IKK  W+  EE +I   +  +GN+W+EIAK LPGRTDN +KN WYS+MRRN+R L++E+S
Sbjct:   39 RRAWSRKEDDAIVRLVNRHGTKRWAVIAQELNGEISGVFRSGKQCRTRWLNHLDPAIKKEPWSEHEERIIYDAQQRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNMRRLAKEIS 154          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17514.1 vs. uniprot
Match: A0A835ZL73_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL73_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.000e-38
Identity = 71/117 (60.68%), Postives = 87/117 (74.36%), Query Frame = 1
Query:   49 RRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSG 399
            RR WS +ED AIR LV + G ++W+ +   +  +Y+I GR+ KQ  ERWHNHL P I K  WTP+EE ++ +  AE+GNRWSEIAKRLPGRTDN VKN WYSSMRRNVR L+REV G
Sbjct:   38 RRSWSTKEDAAIRSLVDKLGMQAWSQVAAAMETEYAIFGRTSKQIWERWHNHLSPGISKAPWTPQEERVMAQAHAELGNRWSEIAKRLPGRTDNHVKNHWYSSMRRNVRRLTREVGG 154          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17514.1 vs. uniprot
Match: A0A7S2G8M0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G8M0_9STRA)

HSP 1 Score: 151 bits (381), Expect = 5.460e-38
Identity = 68/116 (58.62%), Postives = 87/116 (75.00%), Query Frame = 1
Query:   49 RRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVS 396
            RR W+R+EDDAI  LVKRHGT+ WA I + L  +   V RSGKQCR RW NHLDP+IKK  W+  EE +I   +  +GN+W+EIAK LPGRTDN +KN WYS+MRRN+R L++E++
Sbjct:   50 RRAWTRKEDDAIVRLVKRHGTKRWACIAQELNTEIPGVFRSGKQCRTRWLNHLDPAIKKEPWSDTEEHIIYDAQHRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNMRRLAKEIA 165          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1V7_ECTSI2.040e-22789.01Myb-like DNA-binding domain containing protein n=1... [more]
A0A7S1XJ32_9STRA7.590e-5366.13Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
F0YL55_AURAN1.790e-4964.71Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
F0YL28_AURAN4.020e-4563.56Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6H5KLV5_9PHAE1.380e-4445.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2R5FYY8_9STRA4.270e-4462.50Transcription factor MYB118 n=1 Tax=Hondaea fermen... [more]
A0A7S2SND5_9STRA5.070e-4061.21Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S2ST59_9STRA3.860e-3960.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835ZL73_9STRA1.000e-3860.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2G8M0_9STRA5.460e-3858.62Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:447744..454550 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1368
Model size1368
Exons9
Ec32 orthologEc-07_003950.1
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.ADK
EggNOG OGsCOG5147@1,KOG0048@2759
EggNOG free text desc.RNA polymerase II transcription regulator recruiting activity
Seed eggNOG ortholog2880.D7G1V7
Seed ortholog evalue1.1e-181
Seed ortholog score642.9
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936519.319448-CDS-E-siliculosus-1a_M_contig95:447743..4478401622936519.319448-CDS-E-siliculosus-1a_M_contig95:447743..447840Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 447744..447840 -
1696251114.3312936-CDS-E-siliculosus-1a_M_contig95:447743..4478401696251114.3312936-CDS-E-siliculosus-1a_M_contig95:447743..447840Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 447744..447840 -
1622936519.3352046-CDS-E-siliculosus-1a_M_contig95:448208..4485131622936519.3352046-CDS-E-siliculosus-1a_M_contig95:448208..448513Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 448209..448513 -
1696251114.3437684-CDS-E-siliculosus-1a_M_contig95:448208..4485131696251114.3437684-CDS-E-siliculosus-1a_M_contig95:448208..448513Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 448209..448513 -
1622936519.352256-CDS-E-siliculosus-1a_M_contig95:449979..4501121622936519.352256-CDS-E-siliculosus-1a_M_contig95:449979..450112Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 449980..450112 -
1696251114.3590991-CDS-E-siliculosus-1a_M_contig95:449979..4501121696251114.3590991-CDS-E-siliculosus-1a_M_contig95:449979..450112Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 449980..450112 -
1622936519.3679457-CDS-E-siliculosus-1a_M_contig95:450386..4505441622936519.3679457-CDS-E-siliculosus-1a_M_contig95:450386..450544Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 450387..450544 -
1696251114.3682785-CDS-E-siliculosus-1a_M_contig95:450386..4505441696251114.3682785-CDS-E-siliculosus-1a_M_contig95:450386..450544Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 450387..450544 -
1622936519.3829632-CDS-E-siliculosus-1a_M_contig95:450927..4510171622936519.3829632-CDS-E-siliculosus-1a_M_contig95:450927..451017Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 450928..451017 -
1696251114.3764577-CDS-E-siliculosus-1a_M_contig95:450927..4510171696251114.3764577-CDS-E-siliculosus-1a_M_contig95:450927..451017Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 450928..451017 -
1622936519.3987193-CDS-E-siliculosus-1a_M_contig95:451958..4521961622936519.3987193-CDS-E-siliculosus-1a_M_contig95:451958..452196Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 451959..452196 -
1696251114.3850453-CDS-E-siliculosus-1a_M_contig95:451958..4521961696251114.3850453-CDS-E-siliculosus-1a_M_contig95:451958..452196Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 451959..452196 -
1622936519.4517083-CDS-E-siliculosus-1a_M_contig95:452636..4527751622936519.4517083-CDS-E-siliculosus-1a_M_contig95:452636..452775Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 452637..452775 -
1696251114.3939102-CDS-E-siliculosus-1a_M_contig95:452636..4527751696251114.3939102-CDS-E-siliculosus-1a_M_contig95:452636..452775Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 452637..452775 -
1622936519.5148706-CDS-E-siliculosus-1a_M_contig95:453494..4536551622936519.5148706-CDS-E-siliculosus-1a_M_contig95:453494..453655Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 453495..453655 -
1696251114.4029207-CDS-E-siliculosus-1a_M_contig95:453494..4536551696251114.4029207-CDS-E-siliculosus-1a_M_contig95:453494..453655Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 453495..453655 -
1622936519.5326986-CDS-E-siliculosus-1a_M_contig95:454503..4545501622936519.5326986-CDS-E-siliculosus-1a_M_contig95:454503..454550Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 454504..454550 -
1696251114.4124045-CDS-E-siliculosus-1a_M_contig95:454503..4545501696251114.4124045-CDS-E-siliculosus-1a_M_contig95:454503..454550Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 454504..454550 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17514.1prot_E-siliculosus-1a_M_contig95.17514.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig95 447744..454550 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig95.17514.1

>prot_E-siliculosus-1a_M_contig95.17514.1 ID=prot_E-siliculosus-1a_M_contig95.17514.1|Name=mRNA_E-siliculosus-1a_M_contig95.17514.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=456bp
MALDNSIVGESRRSENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAAD
YSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEI
AKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSGPPQRSSLPAIEIDQLDH
RFLEGLLQPTALNMSPERETDNNNNNSSSSNNNNSSEYDGGNNDGRYMKA
AKLAALEVLSSSSTKESKRNVSHAEQRRLIEVAHSVDRACDKDGTVDENL
ISAAITIVSTNAAETPNDVIMAAIKLASVARDGFVEKFKQRLMETGGVHC
TTTKHKPAPAPPANRNASTISQKSSAAATADGGGGSGKKRPLSIDAANGS
AQGAVAPSHSPPPLLPPFYKQRRRFPMVPTASTPRAAAAAAAVAAAAAAA
EAAAAAPSAIGLEPGEGDQHGYDKWAMPPVPDSMRGSFGLPRGGGGPRGS
GSGVS*
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mRNA from alignment at E-siliculosus-1a_M_contig95:447744..454550-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig95.17514.1 ID=mRNA_E-siliculosus-1a_M_contig95.17514.1|Name=mRNA_E-siliculosus-1a_M_contig95.17514.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6807bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:447744..454550- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCTTTGGACAACAGCATCGTTGGCGAATCTCGCCGGAGTGAGAAGTG AGACGCATACATACTTATTGATACTCGGCTTCCTGCGCGGCCGTCCTTCC TTCATGTTCGTACGCATCCTTTCTGTTGTCCAACTCTCTCGCCTCATTAT TTTACAGTTGTTTTTCACTTGGGAGACGCGGTGTGATAAAATAATATCTT TTGTGGACGGTTATATATTGGTGGGATTGTCGACGCGCTAGTGTGTCTAC GAGATGAGTATTCCTCGGGTTGTGTTTCCTTTGGAAGTTGTCCCAGACTG AGCAGTAGGAAGCCGGCCGTTCGCCAACCTTTACGGCACAACATCTTTGT CCTGGCTGCGAACGGAGTCGTGTTTCTCTCGTGGAACTTGGGCATGAAGT CGCAAAGAGAAACCAACTGAGGATGTAACTGCTCTACAATAAGTGCGCCG TGAGGTATCGACAAGACAAAACGAAGAAGAAGAGATGTTGGAAACGACTT GATTACTACATATCATGCTGGTACACCTGCTGGGGAAAAAAATCAAGTGG ATGCGGTGGTTGAGCCTGTTCAACGTGCCCCGTTTTCACCAGATACTGAC ACCGTCTTCATGTCAGCGGACCCAAGGTTCATGAAAATATCCACGAAACT ATAACATAGCCGCAGGTCAGTAGTATTACCAACAAAATATTTACCGCCGT GATTTTATTGCTCGCGGGGTATTAGGCAAATAACGTACAACGGAAGTACT TCGTTATCTGTAGAGTTACGGCATCAGATCAATGTATTCGTAGAAGCGAA AAAATATGCAGGTTGCACAAAGAGCGTGCTGCACACCTGATACAACATTA AAACATGCGTTTGGGTGGATGGCGGTGGTGCTGTTGCCGTTACAGCCGGC GCGTGTGGTCGAGGGAGGAGGACGACGCCATCCGGGTGCTCGTCAAGAGG CACGGGACGCGCAGCTGGGCCACCATCGAGGAGCACCTCGCCGCTGACTA TTCCATCGTCGGACGCTCGGGAAAGCAGTGCAGAGAGCGGTGGCACAACC ACCTAGGTAAGAATTTTTTTTTTCTGCTGGTTTTTGTTCAAACCAATTGT TGTATATTGACGAGATATGACTATCAGGCGGGCCTAAGCATTTGTTTGCG GTGTCAAGAACATTGGTGATGGGGGGGCTGGAATAATTTTTCATGACCCA AGCTTTTACGGCACGCCACAACCAGGCTCACGGTTACGACGACCTTACGA CAGCCTGTTTCCTGGATACTCGGGGCTCATCCAACTATGTGTCACGGTAA CTACTAGATGAGAGTGTCAGGCGTATGCTGCTTTCTCGATCTCCAAGCTG ATCATGTAAAGCGACGCCCAAAGCAAATATAACTGGATCGCACTCCACCC TCATGGCGTTTGTGGGTAAGTTTCATGCAGGCAATGGTAACGACTAGAAC TTTGGGAGCGGGTGCGCCCGCGGGAATGCCCAGGCCTGCACTTTGCGCGT TTGGCCGAAAAACTGATGGCCTCGGGACGAAAAAACTCCCCGTCAAATGC TATGTTCCATCAGTTGCCAAGCATCCGGAAGGAAGCGCAACCACGGCCTC TCATCCCAACAACCGCGACCTTTGCATACATTTTGGGCTCGACTCGAAAA AATCCCCCCCCAAGCACGGAGAACAAGAGCAAGATATTATGTTTGTAGCC CGACAGAGCGGCACCAATCTGATACAGGAATACGCCCATTCTTTTGTTCT TTTTTTCTAAACGTGGTTGTTCCAGACCCAAGCATCAAGAAGGGAACGTG GACCCCCGAAGAGGAAGCCTTGATCACCAAGACCAGGGCCGAGATCGGTA ACCGCTGGTCCGAGATAGCCAAGCGCCTCCCGGGAAGGACGGACAACCAG GTCAAAAACTTCTGGTGAGAGGAGACGACAAAATGGATGCTTGTTTTTTG CCAGAGAAGACGAAAGTTCACCCTATGTATAATGTTTTGCGTGTCCAACG AAAAAAATTGGTCGGTACTCCTTGCCCTGGGTGCCACTGCACTTTTTTTG TGGCTTCGCTATCTGCTTTTTCGTGCGCCGAAATACCTGGCGATGTGATC AGAAGTGGCTGGAGTGCAACAATCACATCCTACCTGTCGGAGCAAAGTTC CACACGACCAAAAACTAGATATGTCTCGCGAAAGGAAACGGAGGCGGACA CCATGCCTGCGATCAAGACTGTGAATAGCAACAATACATTTATTTAAACA TCGATCAACAGCCAACCGTACGGTAAGAATATCGACCGCCCCCCGACCAC CATCGCCAAACGGGAACCACTCCCCCCTCCCCCCGCCGAAAAAAAAATGC CCAGGTACTCCTCGATGCGGAGGAATGTTCGCACGTTGAGCCGCGAAGTG TCCGGTCCTCCCCAGCGCAGCAGCCTCCCGGCCATCGAGATCGACCAACT GGACCACCGCTTCCTCGAGGGCCTCCTGCAGCCCACCGCTCTTAACATGT CTCCCGAGCGGGAAACCGACAACAACAACAACAACAGCAGCAGCAGCAAC AACAACAACAGCAGCGAGTACGACGGCGGGAACAACGACGGCGTGGACCA CCACGATGGTGATGATGACGCCGACGACAGCAACACAAGAGGTGCGGCAG CTGCTGCTGCTGCTGCTGCTGCTGGTTCTCTCAGGAGGGGGAGCAAGAAG AGGAGGAAGAACGCCGACGGGAGCGACCGGAAGAAGAGCAAGAAGAAAAA AGACAAGCACAAGAAGCTCAAGAAACACAGCAGCGGTGGTGGTGGTGATG GTCACGACAAGAAATACGGAGGCGGCGGCGACAGGCCCGCACGCTCCGGC GACCGCGTCAACGGCTACGGCGACGGTTTCGACAACAGGGAAGGAGGCGT TCTGAAAAAGCTTCGAAGGTGTAGTAACCGCGGCATGGGCGGCGGCAGCG GCAGCGGCGGCAACGGCAACGGCAACGGCGGCGGCGGCAGTGGCGGCAGC GGCGGCGGCGGGGGTGCCATGGTTGCTGCCGCCGGGATAGCGAGGGCGGC GGCGGCACTGATCGCCAAGAGGCAGAGCAAGCCCCAACCTGCGGGACCGG CGAAGAGGCAGAAGGGCCCGTACAAGGCTGTGCGCGCCCGTAAGGCCACG GGGCTAGACGGTGAGACGGAGGCTCAAACGCTTGATTGGTGTCCTAGTCA TCGTGTGAAGCATTACGCAACACGTCGGTGCCCGATTTCGATGACGGTTG GGGCTCGCGGATTCGTTCTCCCCCGATACGCTCTGATTTGTTATCCCCAT CCTTTTCGCTGGCGGTTCTCTCTTGAAAGCGGGCGCTGCAACACGCATGA ACTGAACCCCCCCGGAGTGAAATTTCGCCCGGCGTGTAGAGTATGCCTGG CCCTTCGCTTAGCTGCCGCTGAAAAGAGGTTCACAATGGAAAATTGGCCA GGTCAACCGCACCGCATCTGACAGACGTAGTACCCTCTCGTTGACCGCAT CTTCGTCTCTTGGCGCATCTTGCAGAACTGGAGCGCTACATGAAAGCGGC GAAATTGGCGGCCCTGGAGGTGCTATCGTCCTCGTCGACCAAGGAAAGCA AGCGTAACGTATCCCACGCCGAGGTAAGGAGGGTCCGCGTTGCTGTTATT GCTTGCAAAACGTTTTGTCGGTTGTTTCTCCCGCTAAGAGTGCTCGCGCT GGTGCTGCTGCGATTATTGCTGGTGCTGTTCCTCCCCGCAAAATCCATTC AGTGCTTCGGTTTTGCGGCGGACCTTACCCAACGATATACCGGTGCTCAG TCTCTAGGGGAGCGAGAACAAACTCTCATTTACTTTCTCTCGTCCTCCGT GTACCGGAGCCTTCGTCGTGGCGTCATGCATCCCCTTGCTCCAACTCCGG CACCACCTCTAACCCTGACCGATACATCTTTGTGCGCTTGCGCAGCCTCA TTGACTCTTTTCCCCTCGGTGTTGCCTGCCGTGCTCGCGCGACCGCACGT CCGCAGCAACGGAGGTTGATCGAGGTCGCGCACTCGGTAGACCGAGCCTG CGACAAAGACGGCACGGTGGACGAGAACCTCATCTCCGCCGCCATCACCA TCGTGTCCACCAACGCGGCCGAGACGCCCAACGACGTCATCATGGCCGCG ATCAAGCTGGCCAGGTCAGCTCGTAGGGTCGGTGGTCCACCCCACAACCT ACGGCGTACGCGGCGTAAACTTCAAGTTTCTCCGACAATAGAAACAAAGA TACATAGAAGCAAAGGGAAGAAAAACATCCCTCACTCCCTTCCCGCGTTA ATCTCCGTGGCAACTTGGAGATCTTAGGCAAGGTCGGTAGTTCCACGAGG CTCGTAATAATGTCGTTGAAACAATTTGCACAGGCTTGTTGCGATGAACT GACACACCCACCTTTGAATTACCCCCCCCGGTCTTCAGTGTCGCAAGAGA CGGTTTCGTCGAAAAGTTTAAGCAGCGGCTCATGGAAACCGGCGGGGTGC ACTGCACGACCACCAAGCACAAGCCCGCACCAGCACCTCCTGCCAACAGA AATGCATCCACCATCTCCCAGGTACGAACGAACACAGAAAAAAGGGAAAA CAAGACGGCAGACACAGCAGCAGCGCTGCCCGTTATCAAGTGCACTCGTA GATATACGCGTTCTTTTCTTTTTCGCGTTTTTGGAAAGAATGGCTGTTGG AAAAATGGCCTGTGGCGGAGGGGGGGGTGATGAAGTGCGCCGCAGCGGCA AGGGCTTGGTTCTTAGGAGTCAGGGAAAGGGGTTGGCACGTACCTCTGCC GCCGAGAGCAGTGAAAGCTTGAAGAAAACCAGGAAGGACATAGCGACGGG CGGGGTTGAAAAACAGGACGTACGGAGTGCAACTGGACGCCCGCTATCGT GGCTGGATCTGTGATTCCGGATGATGCATTCGGTGCCGTAAAGTTGCCTG TTTCCGTTGACTAGGTAACGACCGCTATTGTAGTTGTCGGTGCCAGGCGA CCGGCGGTGCCACCCGCTCGACGCGACTCGCGCGGGTTCTTCGACCGCAG CATGCTCCCGCTGCCTGCCCGCCGAAAAACCATGCGTGGTTGAGCTGATG GTTTCCTTGTGCCTCGTCCTTTGGTGGCCAGGCGGAAATGTCTTCGGCGA TCCTCAGGCGCAAGATGAGTCCGGCGACGAGGGCAAAGATAGCGGCCGCC GCAGTCGCCGCCGCAGCCAAGGCGAAAGCCGAGGCCGCAGAGGCAGCAGC GGCGAAAGAAACGGCAGCAGGCAAGCGCAAGAAACTGCCCCCCTCTCGCA CGGTGGAGAGCAACGGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCAACAGCGGTAACGACGATGATGATAATGATGACGATGACGACGA AGACGAAGACGAAGGAAGCGACAACGGCAGCAGCGGCGGCGACGGTGGCA GTAGCTACTGTCAAGAAGACGGCGGTGGTGGTGGTGGAAGCGACAGCAAC CGCGGCGGCGGCAGCAGCAGCAGCAGCAGTAATGACAACGATGGGATCGC TCCCTCTCTCCCCCTGTCCGTCCTGTCCGGTCCGCTGCCGTCCCCCCCCC CGCGATCATCGGGCATGAATGGGAAGAGCAAAGCCTCGGTCAATGACAAG AAGGTAGTAGCTGAAGCATTTACCTCTTTGAGACAGCAAATAGTCTGGTA ACAATCATCCGGCAGACTTAGAATAAACTGACAGAAAAACGTCGAGGTCA ATTGGGGGAGAGCCTTAGATGCCCCTCTTTAGTTGGCAACACTGAAACCT TCTCCCACAAAATATCTGCTCAGGTCGGCAGGCCAACTCCTTCCTCCACC GCCCACATTTCGAGCCTTAGATGCCCCTCTTTAGTTGGCAACACTGAAAC CTTCTCCCACAAAATATCTGCTCAGGTCGGCGGGCCAACTCCTTCCTCCA CCGCCCACATTTCGAAGTCCTAGCGATATGTTGTCCTCACGTTTCCTCCC TTCCCCAAAAAAACGGTTTTATTTATTGTCCGTACAGAAATCATCTGCGG CAGCAACAGCCGATGGAGGCGGCGGCAGCGGGAAAAAACGCCCCCTGAGC ATTGATGCCGCCAACGGCAGCGCTCAAGGCGCCGTTGCCCCTTCCCACTC CCCGCCACCGCTTCTCCCACCGTTCTACAAGCAGCGCCGCCGCTTCCCGA TGGTACCAACCGCGTCCACGCCTAGGGCCGCCGCCGCTGCGGCCGCCGTC GCCGCTGCCGCCGCTGCTGCCGAGGCTGCCGCCGCCGCTCCGTCCGCAAT AGGCCTCGAGCCGGGAGAGGGTGACCAGCACGGGTACGATAAGTGAGTGG GAGTGGAGCGAACAGCGTCGATGGCCGTCATCATCGATGCTGCGGTGGTA GTGTAAGTTTGGTATGTAGATTGGTTGCTGTCTTTGGCTGGTCATGATCG AGCCGTGTGAAACGGTGAGGATGTGCTCTTTTTTTTTTTTTTGGTGCGGG AGAAGAGTCTCACGGGTGGCATGACACTCCCGAGAGACGATGAATATTTA CGCCAATTTAACGGCAACAAAGAAACTGAGCGGACGAAGCAACGACTTTC CTTTATCCCACTTCCCTCCTTCTCCGTTCTCCCTGCCCCGGTACCCAACT GCACCTCATTCCGCTACCCATGACGCGTGATGCTCGCGTGTTGTGCGTCA TCACCCTCAGGTGGGCGATGCCCCCTGTGCCGGATTCCATGCGCGGATCA TTCGGTCTGCCGAGGGGCGGAGGCGGTCCCCGAGGCAGCGGCAGCGGGGT AAGCTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:447744..454550-

>mRNA_E-siliculosus-1a_M_contig95.17514.1 ID=mRNA_E-siliculosus-1a_M_contig95.17514.1|Name=mRNA_E-siliculosus-1a_M_contig95.17514.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2736bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:447744..454550- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCTTTGGACAACAGCATCGTTGGCGAATCTCGCCGGAGTGAGAAATG
GCTTTGGACAACAGCATCGTTGGCGAATCTCGCCGGAGTGAGAACCGGCG
CGTGTGGTCGAGGGAGGAGGACGACGCCATCCGGGTGCTCGTCAAGAGGC
ACGGGACGCGCAGCTGGGCCACCATCGAGGAGCACCTCGCCGCTGACTAT
TCCATCGTCGGACGCTCGGGAAAGCAGTGCAGAGAGCGGTGGCACAACCA
CCTAGCCGGCGCGTGTGGTCGAGGGAGGAGGACGACGCCATCCGGGTGCT
CGTCAAGAGGCACGGGACGCGCAGCTGGGCCACCATCGAGGAGCACCTCG
CCGCTGACTATTCCATCGTCGGACGCTCGGGAAAGCAGTGCAGAGAGCGG
TGGCACAACCACCTAGACCCAAGCATCAAGAAGGGAACGTGGACCCCCGA
AGAGGAAGCCTTGATCACCAAGACCAGGGCCGAGATCGGTAACCGCTGGT
CCGAGATAGCCAAGCGCCTCCCGGGAAGGACGGACAACCAGGTCAAAAAC
TTCTGACCCAAGCATCAAGAAGGGAACGTGGACCCCCGAAGAGGAAGCCT
TGATCACCAAGACCAGGGCCGAGATCGGTAACCGCTGGTCCGAGATAGCC
AAGCGCCTCCCGGGAAGGACGGACAACCAGGTCAAAAACTTCTGGTACTC
CTCGATGCGGAGGAATGTTCGCACGTTGAGCCGCGAAGTGTCCGGTCCTC
CCCAGCGCAGCAGCCTCCCGGCCATCGAGATCGACCAACTGGACCACCGC
TTCCTCGAGGGCCTCCTGCAGCCCACCGCTCTTAACATGTCTCCCGAGCG
GGAAACCGACAACAACAACAACAACAGCAGCAGCAGCAACAACAACAACA
GCAGCGAGTACGACGGCGGGAACAACGACGGCGTACTCCTCGATGCGGAG
GAATGTTCGCACGTTGAGCCGCGAAGTGTCCGGTCCTCCCCAGCGCAGCA
GCCTCCCGGCCATCGAGATCGACCAACTGGACCACCGCTTCCTCGAGGGC
CTCCTGCAGCCCACCGCTCTTAACATGTCTCCCGAGCGGGAAACCGACAA
CAACAACAACAACAGCAGCAGCAGCAACAACAACAACAGCAGCGAGTACG
ACGGCGGGAACAACGACGGCCGCTACATGAAAGCGGCGAAATTGGCGGCC
CTGGAGGTGCTATCGTCCTCGTCGACCAAGGAAAGCAAGCGTAACGTATC
CCACGCCGAGCGCTACATGAAAGCGGCGAAATTGGCGGCCCTGGAGGTGC
TATCGTCCTCGTCGACCAAGGAAAGCAAGCGTAACGTATCCCACGCCGAG
CAACGGAGGTTGATCGAGGTCGCGCACTCGGTAGACCGAGCCTGCGACAA
AGACGGCACGGTGGACGAGAACCTCATCTCCGCCGCCATCACCATCGTGT
CCACCAACGCGGCCGAGACGCCCAACGACGTCATCATGGCCGCGATCAAG
CTGGCCAGCAACGGAGGTTGATCGAGGTCGCGCACTCGGTAGACCGAGCC
TGCGACAAAGACGGCACGGTGGACGAGAACCTCATCTCCGCCGCCATCAC
CATCGTGTCCACCAACGCGGCCGAGACGCCCAACGACGTCATCATGGCCG
CGATCAAGCTGGCCAGTGTCGCAAGAGACGGTTTCGTCGAAAAGTTTAAG
CAGCGGCTCATGGAAACCGGCGGGGTGCACTGCACGACCACCAAGCACAA
GCCCGCACCAGCACCTCCTGCCAACAGAAATGCATCCACCATCTCCCAGT
GTCGCAAGAGACGGTTTCGTCGAAAAGTTTAAGCAGCGGCTCATGGAAAC
CGGCGGGGTGCACTGCACGACCACCAAGCACAAGCCCGCACCAGCACCTC
CTGCCAACAGAAATGCATCCACCATCTCCCAGAAATCATCTGCGGCAGCA
ACAGCCGATGGAGGCGGCGGCAGCGGGAAAAAACGCCCCCTGAGCATTGA
TGCCGCCAACGGCAGCGCTCAAGGCGCCGTTGCCCCTTCCCACTCCCCGC
CACCGCTTCTCCCACCGTTCTACAAGCAGCGCCGCCGCTTCCCGATGGTA
CCAACCGCGTCCACGCCTAGGGCCGCCGCCGCTGCGGCCGCCGTCGCCGC
TGCCGCCGCTGCTGCCGAGGCTGCCGCCGCCGCTCCGTCCGCAATAGGCC
TCGAGCCGGGAGAGGGTGACCAGCACGGGTACGATAAAAATCATCTGCGG
CAGCAACAGCCGATGGAGGCGGCGGCAGCGGGAAAAAACGCCCCCTGAGC
ATTGATGCCGCCAACGGCAGCGCTCAAGGCGCCGTTGCCCCTTCCCACTC
CCCGCCACCGCTTCTCCCACCGTTCTACAAGCAGCGCCGCCGCTTCCCGA
TGGTACCAACCGCGTCCACGCCTAGGGCCGCCGCCGCTGCGGCCGCCGTC
GCCGCTGCCGCCGCTGCTGCCGAGGCTGCCGCCGCCGCTCCGTCCGCAAT
AGGCCTCGAGCCGGGAGAGGGTGACCAGCACGGGTACGATAAGTGGGCGA
TGCCCCCTGTGCCGGATTCCATGCGCGGATCATTCGGTCTGCCGAGGGGC
GGAGGCGGTCCCCGAGGCAGCGGCAGCGGGGTAAGCTAAGTGGGCGATGC
CCCCTGTGCCGGATTCCATGCGCGGATCATTCGGTCTGCCGAGGGGCGGA
GGCGGTCCCCGAGGCAGCGGCAGCGGGGTAAGCTAA
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