prot_E-siliculosus-1a_M_contig95.17511.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17511.1
Unique Nameprot_E-siliculosus-1a_M_contig95.17511.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length129
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17511.1 vs. uniprot
Match: A0A6H5KU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU65_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 1.110e-72
Identity = 111/128 (86.72%), Postives = 118/128 (92.19%), Query Frame = 0
Query:    1 MTSDVPYNLMGACGGLIVSCAIVPQLARVIRRKQSADISYAHLMCFVGGMVMFLVYYGYYELWELFFPSLLSMSFAILLLALKIRLEEFPLQPRAAAAGASVVVGDTPGDGETVANSSSDAQPLMSSW 128
            MTSDVPYNLMG CGGLIV+CA  PQLARVIRRKQSADISY HLM F+GGMVMFLVYYGYYELWELFFPSL+SMSF ILLLA KIR+EEFPL+PRAAAAGASV VGDTPGDGE + N+SSDAQPLMSSW
Sbjct:    1 MTSDVPYNLMGVCGGLIVACAYAPQLARVIRRKQSADISYTHLMVFMGGMVMFLVYYGYYELWELFFPSLISMSFVILLLAAKIRMEEFPLRPRAAAAGASVAVGDTPGDGERMTNTSSDAQPLMSSW 128          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17511.1 vs. uniprot
Match: D7G1V3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V3_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 8.750e-70
Identity = 111/128 (86.72%), Postives = 118/128 (92.19%), Query Frame = 0
Query:    1 MTSDVPYNLMGACGGLIVSCAIVPQLARVIRRKQSADISYAHLMCFVGGMVMFLVYYGYYELWELFFPSLLSMSFAILLLALKIRLEEFPLQPRAAAAGASVVVGDTPGDGETVANSSSDAQPLMSSW 128
            M SDVPYNLMGA GGLIV+ A VPQLARVIRRKQSADISYAHLM FVGG+VMFL YYGYYELWE+FFP+LLSMSFAILLLALKIRLEEFPL+PRAA  GASVVVGDT GDGE +AN+SSDAQPLMSSW
Sbjct:    1 MASDVPYNLMGASGGLIVAFAFVPQLARVIRRKQSADISYAHLMVFVGGLVMFLAYYGYYELWEVFFPALLSMSFAILLLALKIRLEEFPLRPRAAVPGASVVVGDTSGDGERMANTSSDAQPLMSSW 128          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17511.1 vs. uniprot
Match: D7G1V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V2_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 5.460e-33
Identity = 66/125 (52.80%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    3 SDVPYNLMGACGGLIVSCAIVPQLARVIRRKQSADISYAHLMCFVGGMVMFLVYYGYYELWELFFPSLLSMSFAILLLALKIRLEEFPLQPRAAAAGASVVVGDTPGDGETVANSSSDAQPLMSS 127
            SD  Y++MG  GG +++ ++VPQ+ RV  RK++ADIS+ + + FV G+VMFLV+YGYYELWELFFP+L SM   I L  LKIRLE  P +  AAA   S V  +TPG+G T+ N SS+  PL+ S
Sbjct:    2 SDTVYDVMGFLGGCVMAASLVPQVYRVTVRKKAADISHTYQVVFVTGIVMFLVFYGYYELWELFFPALASMMLQIYLAVLKIRLERCPRRHTAAAP--STVASETPGEGATLDNGSSERTPLLKS 124          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17511.1 vs. uniprot
Match: D7G1V6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1V6_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 2.100e-14
Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 0
Query:    1 MTSDVPYNLMGACGGLIVSCAIVPQLARVIRRKQSADISYAHLMCFVGGMVMFLVYYGYYELWELFFPSLLSMSFAILLLALKIRLEE 88
            ++ D  +   G  GGL+++ A +PQ+  V +R +S DISY +   F GGM+ FL+YYGY  LW +F PS LS+     L+ LK  LEE
Sbjct:   12 ISQDQLFRACGTAGGLLLAGAQLPQIYHVTKRGKSRDISYMYQFIFAGGMICFLIYYGYNGLWAVFVPSCLSLVCMCYLIGLKAYLEE 99          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17511.1 vs. uniprot
Match: A0A6H5K0Z2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Z2_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.550e-12
Identity = 33/86 (38.37%), Postives = 53/86 (61.63%), Query Frame = 0
Query:    4 DVPYNLMGACGGLIVSCAIVPQLARVIRRKQSADISYAHLMCFVGGMVMFLVYYGYYELWELFFPSLLSMSFAILLLALKIRLEEF 89
            D  +N +G  GG+I++CA+VPQ+    +R+ + DISY     +V G+   ++YY ++ LW +FFP  +  S  I L ALK+  E+F
Sbjct:    9 DQIFNAVGTTGGIILACALVPQIVLAHKRRSAEDISYMWQAIYVTGLATLMIYYVHFGLWAVFFPVAVECSCLIYLTALKMYFEKF 94          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17511.1 vs. uniprot
Match: J0S1V5_9EURY (MtN3/saliva-related transmembrane protein, conserved region n=3 Tax=Methanofollis TaxID=81416 RepID=J0S1V5_9EURY)

HSP 1 Score: 50.4 bits (119), Expect = 1.030e-5
Identity = 18/51 (35.29%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    6 PYNLMGACGGLIVSCAIVPQLARVIRRKQSADISYAHLMCFVGGMVMFLVY 56
            P +L+G   G + + + +PQ+A+ +R + + D SYA L+CF+ G++++L Y
Sbjct:    3 PLHLLGLAAGSLTTLSFIPQVAKTLRTRSAHDFSYAMLVCFLAGLILWLAY 53          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17511.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KU65_9PHAE1.110e-7286.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1V3_ECTSI8.750e-7086.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1V2_ECTSI5.460e-3352.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1V6_ECTSI2.100e-1443.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K0Z2_9PHAE1.550e-1238.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
J0S1V5_9EURY1.030e-535.29MtN3/saliva-related transmembrane protein, conserv... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1280.290coord: 5..89
e-value: 8.7E-12
score: 46.9
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..128
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
NoneNo IPR availableTMHMMTMhelixcoord: 65..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:421681..427902 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17511.1mRNA_E-siliculosus-1a_M_contig95.17511.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig95 420772..427998 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig95.17511.1 ID=prot_E-siliculosus-1a_M_contig95.17511.1|Name=mRNA_E-siliculosus-1a_M_contig95.17511.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=129bp
MTSDVPYNLMGACGGLIVSCAIVPQLARVIRRKQSADISYAHLMCFVGGM
VMFLVYYGYYELWELFFPSLLSMSFAILLLALKIRLEEFPLQPRAAAAGA
SVVVGDTPGDGETVANSSSDAQPLMSSW*
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